Score E
Sequences producing significant alignments: (bits) Value
gi|473901 (L16975) ORF1 [Lactococcus lactis] 663 0.0
sp|P54389|YPIA_BACSU HYPOTHETICAL 48.3 KD PROTEIN IN QCRA-A... 155 5e-37
gi|2687949 (AE001119) B. burgdorferi predicted coding regio... 63 4e-09
gi|2983399 (AE000710) hypothetical protein [Aquifex aeolicus] 62 6e-09
gb|AAD36836.1|AE001815_10 (AE001815) conserved hypothetical... 58 2e-07
gi|2688000 (AE001123) B. burgdorferi predicted coding regio... 58 2e-07
gi|2688072 (AE001129) cell division control protein 27, put... 56 6e-07
sp|Q58208|Y798_METJA HYPOTHETICAL PROTEIN MJ0798 >gi|212851... 56 6e-07
gi|3322323 (AE001191) conserved hypothetical protein [Trepo... 55 1e-06
gi|2983806 (AE000738) putative protein [Aquifex aeolicus] 54 2e-06
gi|2266992 (U77412) O-linked GlcNAc transferase [Caenorhabd... 53 3e-06
gi|687844 (U21320) contains TPR domain-like repeats [Caenor... 53 3e-06
emb|CAA18877.1| (AL023287) tpr domain protein [Schizosaccha... 53 4e-06
sp|Q58350|Y940_METJA HYPOTHETICAL PROTEIN MJ0940 >gi|212931... 53 5e-06
gb|AAF26789.1|AC016829_13 (AC016829) putative O-linked GlcN... 52 1e-05
gb|AAD17225.1| (AF117151) tetratricopeptide repeat protein;... 50 4e-05
ref|NP_006522.1|| Probe hTg737 (polycystic kidney disease, ... 49 6e-05
emb|CAA76834| (Y17720) SPINDLY protein [Petunia x hybrida] 49 8e-05
gi|2984229 (AE000766) putative protein [Aquifex aeolicus] 49 8e-05
gi|2688100 (AE001131) surface-located membrane protein 1 (l... 49 8e-05
ref|NP_006810.1|| stress-induced-phosphoprotein 1 (Hsp70/Hs... 48 1e-04
ref|NP_033402.1|| transgene insert site 737, insertional mu... 47 2e-04
dbj|BAA30049| (AP000004) 753aa long hypothetical protein [P... 47 3e-04
pir||A41604 myosin heavy chain, smooth muscle, long splic f... 46 4e-04
sp|P35748|MYST_RABIT MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOF... 46 4e-04
gb|AAD36762.1|AE001810_1 (AE001810) conserved hypothetical ... 46 5e-04
sp|P10587|MYSG_CHICK MYOSIN HEAVY CHAIN, GIZZARD SMOOTH MUSCLE 46 5e-04
gi|3322760 (AE001223) T. pallidum predicted coding region T... 46 5e-04
pir||S03166 myosin heavy chain, gizzard smooth muscle - chi... 46 5e-04
dbj|BAA17814| (D90909) hypothetical protein [Synechocystis ... 46 7e-04
gi|2984175 (AE000762) hypothetical protein [Aquifex aeolicus] 45 0.001
dbj|BAA36971| (D10667) smooth muscle myosin heavy chain [Ho... 45 0.002
gi|2622708 (AE000918) O-linked GlcNAc transferase [Methanob... 45 0.002
sp|P35749|MYST_HUMAN MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOF... 45 0.002
sp|P56558|OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETY... 45 0.002
sp|Q58741|YD45_METJA HYPOTHETICAL PROTEIN MJ1345 >gi|212880... 45 0.002
gi|1213541 (U50193) weak similarity to SP:YAD5_CLOAB (P3374... 45 0.002
emb|CAA49154| (X69292) smooth muscle mysosin heavy chain [... 45 0.002
sp|P33746|YAD5_CLOAB HYPOTHETICAL 36.9 KD PROTEIN IN ADHE 5... 45 0.002
pir||B36972 aad 5'-region hypothetical protein - Clostridiu... 45 0.002
gi|2688230 (AE001139) B. burgdorferi predicted coding regio... 44 0.002
dbj|BAA18162| (D90912) hypothetical protein [Synechocystis ... 44 0.002
gi|3037137 (AF056198) Hsp70/Hsp90 organizing protein homolo... 44 0.003
emb|CAA75351| (Y15068) p60 protein [Rattus norvegicus] 44 0.003
ref|NP_003596.1|| O-linked GlcNAc transferase; beta-N-acety... 44 0.003
dbj|BAA17116| (D90903) hypothetical protein [Synechocystis ... 44 0.003
gb|AAB94760.1| (AF039202) Hsp70/Hsp90 organizing protein; h... 43 0.004
gi|881485 (U27830) extendin [Mus musculus] 43 0.004
pir||A56534 P58 protein - bovine >gi|468012 (U04631) PKR in... 43 0.004
sp|Q04737|Y751_SYNY3 HYPOTHETICAL 27.8 KD PROTEIN SLR0751 >... 43 0.005
emb|CAB41081.1| (AL035453) cB42E1.1 (PUTATIVE novel protein... 42 0.008
pir||G64502 hypothetical protein MJ1626 - Methanococcus jan... 42 0.008
gi|473901 (L16975) ORF1 [Lactococcus lactis]
Length = 349
Score = 663 bits (1693), Expect = 0.0
Identities = 336/349 (96%), Positives = 337/349 (96%)
Query: 70 INLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEAREL 129
+NLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFE DFETAISKLEEAREL
Sbjct: 1 VNLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEVDFETAISKLEEAREL 60
Query: 130 SDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENA 189
SDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENA
Sbjct: 61 SDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENA 120
Query: 190 ISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEA 249
ISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEA
Sbjct: 121 ISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEA 180
Query: 250 NQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVF 309
NQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVF
Sbjct: 181 NQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVF 240
Query: 310 LLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKALENDSEAAALYEELIQTNLSE 369
LLANLYFNEEDFEAVIN AKWLFAGAHKALENDSEAAALYEELIQTNLSE
Sbjct: 241 LLANLYFNEEDFEAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYEELIQTNLSE 300
Query: 370 NPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY 418
NPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY
Sbjct: 301 NPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY 349
sp|P54389|YPIA_BACSU HYPOTHETICAL 48.3 KD PROTEIN IN QCRA-AROE INTERGENIC REGION
>gi|1146224 (L47709) putative [Bacillus subtilis]
>gi|2634677|emb|CAB14175| (Z99115) similar to
hypothetical proteins [Bacillus subtilis]
Length = 423
Score = 155 bits (389), Expect = 5e-37
Identities = 108/418 (25%), Positives = 206/418 (48%), Gaps = 6/418 (1%)
Query: 5 EDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPE 64
++ I + G+ N+L+KA K + E A A+ G ++++ + + P
Sbjct: 6 QEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLHDLYPN 65
Query: 65 TTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLE 124
T+ AE+ D ++AL L IP D +Y +L+ +ADLYQ +G FE + KL
Sbjct: 66 ETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVSEQKLF 125
Query: 125 EARELSDS-PLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQL 183
+A+ + D+ P+I FAL E YF QG Y+ A+ +Y K + + ++++QR+ +S +
Sbjct: 126 QAKSILDNEPVIDFALGELYFAQGAYAKAV-QYFKTTAEEQSEIGGVNVHQRLAESLSAS 184
Query: 184 GNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAY 243
G FE+AI + EK+++ + P T++ + AI L+++D + + +
Sbjct: 185 GEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSLYMPL 244
Query: 244 AQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPEL 303
+++ EA ++ AL+ AK+G++ + L +A+K+ K+ ++ L +AL L
Sbjct: 245 SKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALALDPG 304
Query: 304 HDETVFLLANLYFNEEDFEAVINXXXXXXXXXX---XAKWLFAGAHKALENDSEAAALYE 360
E + L +Y EED++ +I+ W A A+ LE EA +
Sbjct: 305 FVEALHTLLAVYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAKQSF- 363
Query: 361 ELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY 418
E + E+ +FL +Y FL E G + P++++ LE+ +E + + +++ +
Sbjct: 364 EAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKVLEMDGANEELEETILRIEDEF 421
gi|2687949 (AE001119) B. burgdorferi predicted coding region BB0058 [Borrelia
burgdorferi]
Length = 656
Score = 63.2 bits (151), Expect = 4e-09
Identities = 72/304 (23%), Positives = 129/304 (41%), Gaps = 25/304 (8%)
Query: 24 AKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLD 83
A + N+++E A + ID+++KIY +++ + D L+ LA I E NG
Sbjct: 84 ASKMSNEDTEYKILYANILLKNDKIDQAKKIYSEVLVKQRNNIDALVGLASIFEKNGLFI 143
Query: 84 EALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEAR-ELSDSPLITFALAES 142
A NY I +N +A + D+YQ G + + + R P +AE
Sbjct: 144 AAANYYLSILDYSQNNYSAFEHLIDIYQRLGMHDKIRHLINKVRVNFLSFPDFHKRVAEF 203
Query: 143 YFEQGDYSAA---ITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEF 199
Y + A Y L E + Y+ + Y +E+AI L+K++
Sbjct: 204 YISINNLGLAEKYALNYLALIESSYKDFGVVDAYRLLALVYLHEFKYEDAIEALQKAILV 263
Query: 200 DEKPETLYKIA----LLYGETHNETRAIANFKRLE--KMDVEFLNYELAYAQTLEANQEF 253
++ + LY + L +G+ +AI N +R + K D+EF Y +A ++ A+
Sbjct: 264 NKDSDELYYLLGYSYLRFGDIE---KAILNLERAKNLKKDLEF--YNIALEESFFASN-- 316
Query: 254 KAALEMAKKGMKKNPNAVPLLHFASK--ICFKLKDKAAAERYLVDALNLPELHDETVFLL 311
+ +K N NA H+ ++ FK + A +A+++ +D FLL
Sbjct: 317 ------FRNFLKNNSNARISKHYENEGLKAFKSLNLNKALFNAKNAVDIWPDNDSARFLL 370
Query: 312 ANLY 315
+ +Y
Sbjct: 371 SKIY 374
gi|2983399 (AE000710) hypothetical protein [Aquifex aeolicus]
Length = 545
Score = 62.5 bits (149), Expect = 6e-09
Identities = 65/291 (22%), Positives = 130/291 (44%), Gaps = 24/291 (8%)
Query: 30 DNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEA---L 86
++ ++L LA+ G I+E+ KIY+++++ P +Y A + G D+A L
Sbjct: 217 NSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKIL 276
Query: 87 NYLYQIPVNDEN----YIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAES 142
LY + ++ N Y L +L + + +E +++ E ++ + L
Sbjct: 277 EELYYVNPSNPNVAFAYALTLEATGELKKAKEIYENLLNRFPENIKVIE------RLIGI 330
Query: 143 YFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEK-SLEFDE 201
Y + G+Y A + + K+L K I D Y++ ++ A+ L+K ++
Sbjct: 331 YLDLGNYEDA---KRLIEKAKVLAPDKKEILFLEADYYSKTKQYDKALEILKKLEKDYPN 387
Query: 202 KPETLYKIALLY---GETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQE-FKAAL 257
+ A++Y G+ N +A+ L+ + ++ NY L Y+ L +E + A
Sbjct: 388 DSRVYFMEAIVYDNLGDIKNAEKALRKAIELDPENPDYYNY-LGYSLLLWYGKERVEEAE 446
Query: 258 EMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETV 308
E+ KK ++K+P + + + D A +YL+ AL E +D+ V
Sbjct: 447 ELIKKALEKDPENPAYIDSMGWVYYLKGDYERAMQYLLKALR--EAYDDPV 495
Score = 60.1 bits (143), Expect = 3e-08
Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 74/398 (18%)
Query: 50 ESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADL 109
E K + + ++P+ YL + + +++ E + Y+ +EN + L A+
Sbjct: 70 ELAKEFLETYPDEPQAYIYLYTIYKFLKEDKKAFEVIKEAYKSFPFNENVVLFL---ANE 126
Query: 110 YQFEGDFETAISKLEEARELS-DSPLITFALAESYFEQGDYSAAITEYAKLSERKILHET 168
Y +G A L E E D+PL + L Y +GD + + K E+K +
Sbjct: 127 YINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAP 186
Query: 169 KISIYQRIGDSYAQLGNFENAISFLEKSLE-FDEKPETLYKIALLYGETHNETRAIANFK 227
+ +G+ Y Q F+ A + LE + P+ L K+A LY + AI ++
Sbjct: 187 AVL---SLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYE 243
Query: 228 RLEKMDVEFLNYE----------------------------------LAYAQTLEANQEF 253
+L + +NY+ AYA TLEA E
Sbjct: 244 KLINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGEL 303
Query: 254 KAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLAN 313
K A E+ + + + P + ++ I L + A+R + A L E +FL A+
Sbjct: 304 KKAKEIYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEAD 363
Query: 314 LYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKALENDSEAAALYEELIQTNLSENPEF 373
Y + ++ + + K NDS + E ++ NL
Sbjct: 364 YYSKTKQYDKALE--------------ILKKLEKDYPNDSRVYFM-EAIVYDNL------ 402
Query: 374 LEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLL 411
G I E + + +EL P++ + N L
Sbjct: 403 -----------GDIKNAEKALRKAIELDPENPDYYNYL 429
gb|AAD36836.1|AE001815_10 (AE001815) conserved hypothetical protein [Thermotoga maritima]
Length = 538
Score = 57.8 bits (137), Expect = 2e-07
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 23/261 (8%)
Query: 46 GFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEA-LNYLYQIPVNDENYIAALI 104
G +DE++KI ++ E Y + + G L EA + I +ND + A
Sbjct: 84 GKLDEAEKILEKA-KEVQYDYRYHFYRGLLLKHRGELGEAEIEMRLAISMNDR-FAPAYF 141
Query: 105 KIADLYQFEGDFETAISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERK 163
++A + + + + E ++ E+A E++ L+ + E+G AI EY ++ E+
Sbjct: 142 ELAGILKEKNEIEDSLLFYEKAYEVNKEFLLPLLKKGDLLLEEGRLEEAIEEYRRILEKD 201
Query: 164 ILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223
+ +Y+R+G Y QL F+ A F +K+LE + K Y ++ + A+
Sbjct: 202 ---SNFVEVYERLGVIYNQLQRFKEAEKFFKKALEIERKDHVEYNLSYTLIKLGKLFEAL 258
Query: 224 ANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPN--------AVPLLH 275
KRL + + + Y L+ ++ ALE+ + +++ LLH
Sbjct: 259 EILKRLYEKNPDDPMVANEYGLLLKTLGLYEEALEVFEDAYRRHKEEEILKYNYGTILLH 318
Query: 276 F--------ASKICFKLKDKA 288
F S+I +LKD+A
Sbjct: 319 FEKEKAVSILSEISGELKDRA 339
gi|2688000 (AE001123) B. burgdorferi predicted coding region BB0106 [Borrelia
burgdorferi]
Length = 569
Score = 57.8 bits (137), Expect = 2e-07
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 25 KALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDE 84
K L +DN + D +++ + + ++ +I+++I + + +LIN + + N+D
Sbjct: 168 KNLSSDNG--ILDFNKFIDKI-YKEKDARIFEEI-GLNLKNNAFLINAMLLYIEKKNIDS 223
Query: 85 ALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYF 144
A L++I D++++ L I+ Y D + IS L+ + D P + F LA++YF
Sbjct: 224 AKRILFRIK-EDKSFLKELAYIS--YNLN-DLDYTISNLKSIKNEED-PTLLFLLADAYF 278
Query: 145 EQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLE-FDEKP 203
++GD A EY KL R + + +Y + +++ AIS+L K+ E F +
Sbjct: 279 KKGDIKNAKNEYLKLYTR--FPDYNVLVYLNLALIANSENDYKRAISYLNKANEVFKDNK 336
Query: 204 ETLYKIALLYGETHNETRA---IANFK 227
Y +A +Y N +A IAN+K
Sbjct: 337 IINYYLANIYFGIKNYFKANEIIANYK 363
gi|2688072 (AE001129) cell division control protein 27, putative [Borrelia
burgdorferi]
Length = 379
Score = 55.8 bits (132), Expect = 6e-07
Identities = 47/197 (23%), Positives = 92/197 (45%), Gaps = 9/197 (4%)
Query: 39 AEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNY---LYQIPVN 95
A Y ++ F +S++ Y ++M P+ L+ + + D EAL Y +Y++ +
Sbjct: 134 ASYRKLKNF-QKSKQTYLKVMELIPDNDYALVGIGHLYYDFKEYKEALKYWLKMYELNQS 192
Query: 96 DENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLIT-FALAESYFEQGDYSAAIT 154
+ + L I + Y+ +F I ++A E+S S F LA+ Y +Y A+
Sbjct: 193 KVD-VRVLTSIGNCYRKLREFTRGIYFFKKALEISPSNFYAVFGLADCYRGNKEYKEALK 251
Query: 155 EYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYG 214
+ + E+ + ++ R+GD+Y L ++EN+ + +K+L+ D + +AL+
Sbjct: 252 YWLDIIEKDPKNNLVLT---RVGDAYRYLNDYENSQIYYKKALDVDFDMFAILGLALIQK 308
Query: 215 ETHNETRAIANFKRLEK 231
E A+ K L K
Sbjct: 309 EQGKYEEALIAIKSLIK 325
Score = 52.7 bits (124), Expect = 5e-06
Identities = 53/257 (20%), Positives = 107/257 (41%), Gaps = 7/257 (2%)
Query: 48 IDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIA 107
+ E++ ++ I+ +D E L+ L +I N D+A+ Y + V + AL +
Sbjct: 40 LSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAIVYYQKCLVKHPSNNYALFGLG 99
Query: 108 DLYQFEGDFETAISKLEEARELS-DSPLITFALAESYFEQGDYSAAITEYAKLSERKILH 166
D Y+ +++ A EE + ++ + +A SY + ++ + Y K+ E ++
Sbjct: 100 DCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAASYRKLKNFQKSKQTYLKVME--LIP 157
Query: 167 ETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKP---ETLYKIALLYGETHNETRAI 223
+ ++ IG Y ++ A+ + K E ++ L I Y + TR I
Sbjct: 158 DNDYALV-GIGHLYYDFKEYKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGI 216
Query: 224 ANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFK 283
FK+ ++ A N+E+K AL+ ++K+P +L
Sbjct: 217 YFFKKALEISPSNFYAVFGLADCYRGNKEYKEALKYWLDIIEKDPKNNLVLTRVGDAYRY 276
Query: 284 LKDKAAAERYLVDALNL 300
L D ++ Y AL++
Sbjct: 277 LNDYENSQIYYKKALDV 293
Score = 45.3 bits (105), Expect = 0.001
Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Query: 55 YDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEG 114
+ + + P + LA+ N EAL Y I D L ++ D Y++
Sbjct: 219 FKKALEISPSNFYAVFGLADCYRGNKEYKEALKYWLDIIEKDPKNNLVLTRVGDAYRYLN 278
Query: 115 DFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQ 174
D+E + ++A ++ LA EQG Y A+ L + + ++Y
Sbjct: 279 DYENSQIYYKKALDVDFDMFAILGLALIQKEQGKYEEALIAIKSLIKN---NPKNSALYV 335
Query: 175 RIGDSYAQLGNFENAISFLEKSLEFDEK 202
+ Y LG NA+ L L+ K
Sbjct: 336 NAAECYEALGQIGNAVDILSSFLQLGMK 363
sp|Q58208|Y798_METJA HYPOTHETICAL PROTEIN MJ0798 >gi|2128511|pir||F64399 hypothetical
protein MJ0798 - Methanococcus jannaschii >gi|1499620
(U67524) conserved hypothetical protein [Methanococcus
jannaschii]
Length = 334
Score = 55.8 bits (132), Expect = 6e-07
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 10/211 (4%)
Query: 25 KALK-NDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAE---IAEDNG 80
KAL+ N N+E+L + + D + K +++ +D L L + + DN
Sbjct: 127 KALELNQNTELLCKKGYALLKLYKRDLAIKYFEKASEKDRNNYKALFGLGKSYYLMSDNK 186
Query: 81 NLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPL-ITFAL 139
N ++ Y ++ + N + AL + +LY +E D E AI+ ++A EL + + +
Sbjct: 187 N---SIKYFEKVLELNPNDVEALEYLGELY-YEEDCEKAINYFKKALELKPDDIDLILKV 242
Query: 140 AESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEF 199
A +YF+ Y A+ + K + IY+ +G Y LG E AI EK E
Sbjct: 243 AFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLKEI 302
Query: 200 DEKPETLYK-IALLYGETHNETRAIANFKRL 229
+ +Y+ IAL Y E N +A +K+L
Sbjct: 303 NLYHYEIYEIIALTYEEVGNIEKAKEFYKKL 333
gi|3322323 (AE001191) conserved hypothetical protein [Treponema pallidum]
Length = 393
Score = 55.0 bits (130), Expect = 1e-06
Identities = 61/272 (22%), Positives = 115/272 (41%), Gaps = 16/272 (5%)
Query: 1 MSYSEDTIDFLHQGDLIGMQNSLAKALK--NDNSEMLADLAEYMQMMGFIDESQKIYDQI 58
M S D FL DL ++ K L+ DN+ L L + + E+ Y +
Sbjct: 40 MRLSRDGYAFLKVNDLERAESEFGKILQIEADNNYALVGLGDAARKRRAYQEASDYYTRC 99
Query: 59 MSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFET 118
+ P + L LA+ ++ +A+ Q D + IA L ++AD Y+ DF+
Sbjct: 100 LQHYPRNSYALFGLADCYKNMRRYVKAVEVWQQYLEQDSHNIAVLTRMADAYRKIHDFQN 159
Query: 119 AISKLEEARELSD-SPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIG 177
+ + + L + + LA +++ Y A+ + KL E H I + IG
Sbjct: 160 SRNLYSQVIALDEHNSYALIGLAHLHYDFKKYREALIYWKKLLE-CAEHSVDIRVLTSIG 218
Query: 178 DSYAQLGNFENAISFLEKSLEFDEKPETLY---KIALLYGETHNETRAIANFKRLEKMDV 234
+ Y ++ F + + +++L+ D P Y +A Y + + R+I ++++ + D
Sbjct: 219 NCYRKMKLFSQGLPYFQEALKRD--PGNFYGFFGMADCYRGMNMQERSIQYWEKILEKDT 276
Query: 235 E----FLNYELAYAQTLE---ANQEFKAALEM 259
+ AY E A+Q +K AL++
Sbjct: 277 QNRVILTRIADAYRHIGEYEKAHQTYKRALDI 308
Score = 48.0 bits (112), Expect = 1e-04
Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 3/169 (1%)
Query: 34 MLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIP 93
+L + + M + + + + DP +A+ + ++ Y +I
Sbjct: 213 VLTSIGNCYRKMKLFSQGLPYFQEALKRDPGNFYGFFGMADCYRGMNMQERSIQYWEKIL 272
Query: 94 VNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAI 153
D L +IAD Y+ G++E A + A ++ T LA QG Y A+
Sbjct: 273 EKDTQNRVILTRIADAYRHIGEYEKAHQTYKRALDIDYDAYATLGLAVLCKLQGRYEEAV 332
Query: 154 TEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEK 202
+L + L +Y + D Y +LG + A+ L +F K
Sbjct: 333 VSLDRLVQ---LDRKNYRVYVELADCYRKLGQKQKALETLRPFQQFGVK 378
gi|2983806 (AE000738) putative protein [Aquifex aeolicus]
Length = 670
Score = 53.9 bits (127), Expect = 2e-06
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 47/285 (16%)
Query: 41 YMQMMGFIDESQKIYDQIMSED------PETTDYLINLAEIAEDNGNLDEALNYLYQIPV 94
Y +GF E+ + +M E +Y L + +NG++ E + LY
Sbjct: 279 YKMALGFDKENLRAIKGLMYASLALKRYEEAYNYARELGRLGVENGDI-ERVKALY---- 333
Query: 95 NDENYIAALIKIADLYQFEGDFETAISKLEEARELS-DSPLITFALAESYFEQGDYSAAI 153
L K A+ + +++ A L+EA +L+ D P + L + YF +GDY+ A
Sbjct: 334 --------LAKKAEDFVKRKEYDKAYIYLKEAEKLAPDDPYVLLLLGDIYFGRGDYTQAY 385
Query: 154 TEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLY 213
Y + +RK + + I + A L N++ ++L + ++ E E
Sbjct: 386 KYYVEAYKRKRDFDFLLKILYAL----ANLNNYDLINTYLSQ-IDVSELNEA-------- 432
Query: 214 GETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPL 273
+ R + NF ++ + V+ +Y L+ ++++ A +AK+G+ P L
Sbjct: 433 -----QRRKLKNFYKV--LYVKASSYYLS-------QKDYEKAYRIAKEGLILFPKNRTL 478
Query: 274 LHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNE 318
L + C L+D AE AL+L E + ++ LA Y E
Sbjct: 479 LKNLAWSCLNLEDYKCAEENFKKALSLYENDYDALYGLALTYARE 523
Score = 50.0 bits (117), Expect = 4e-05
Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 27/289 (9%)
Query: 43 QMMGFIDESQKIYDQIMSEDPETTDY----LINLAEIAEDNGNLDEALNYLYQIPVNDEN 98
+M +++ ++ + Q ++ T++ + LA I GN ++A ++P +
Sbjct: 133 EMYDYLNANKLVEAQTLAYSLLNTEFRNEAIFVLALINMKKGNHEKACELFSKLPDKFKP 192
Query: 99 YIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAK 158
+ L I+ LY + + + K E+ +D A QG+ AI +
Sbjct: 193 NLEELRSISCLYAEKIKEKPEVKKEEKTVYRAD-----LTQAGKLLAQGNPEEAI----E 243
Query: 159 LSERKILHE-TKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYK------IAL 211
L+++ +L + T + IGD+Y +LG++ NA S+ + +L FD++ K +AL
Sbjct: 244 LAKKVLLSDPTNVEAMLIIGDAYMELGDYSNAYSYYKMALGFDKENLRAIKGLMYASLAL 303
Query: 212 -LYGETHNETRAIANFKRLEKMDVEFLN--YELAYAQTLEANQEFKAALEMAKKGMKKNP 268
Y E +N R + +E D+E + Y A+ +E+ A K+ K P
Sbjct: 304 KRYEEAYNYARELGRL-GVENGDIERVKALYLAKKAEDFVKRKEYDKAYIYLKEAEKLAP 362
Query: 269 NAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHD---ETVFLLANL 314
+ +L I F D A +Y V+A D + ++ LANL
Sbjct: 363 DDPYVLLLLGDIYFGRGDYTQAYKYYVEAYKRKRDFDFLLKILYALANL 411
gi|2266992 (U77412) O-linked GlcNAc transferase [Caenorhabditis elegans]
Length = 1151
Score = 53.5 bits (126), Expect = 3e-06
Identities = 57/223 (25%), Positives = 97/223 (42%), Gaps = 22/223 (9%)
Query: 36 ADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVN 95
+DL ++ MG ++E++ Y + + P+ NL + G + A+++ +
Sbjct: 265 SDLGNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTL 324
Query: 96 DENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAIT 154
D N++ A I + ++ + F+ A+S A LS + + LA Y+EQG AI
Sbjct: 325 DPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAID 384
Query: 155 EYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYG 214
Y K I + D+Y L N + EK + E +Y AL
Sbjct: 385 TYKK----------AIDLQPHFPDAYCNLAN-----ALKEKGSVVE--AEQMYMKALELC 427
Query: 215 ETHNETR-AIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAA 256
TH +++ +AN KR E+ +E + Y + LE EF AA
Sbjct: 428 PTHADSQNNLANIKR-EQGKIE--DATRLYLKALEIYPEFAAA 467
Score = 48.8 bits (114), Expect = 8e-05
Identities = 92/408 (22%), Positives = 156/408 (37%), Gaps = 53/408 (12%)
Query: 23 LAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNL 82
LA + N +E ++L Y + G + ++ + Y + PE D INLA G+L
Sbjct: 184 LAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDL 243
Query: 83 DEALN-YLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLIT---FA 138
++A+ Y + +N + Y +DL G+ A+ +LEEA+ + T FA
Sbjct: 244 EQAVTAYFNALQINPDLYCVR----SDL----GNLLKAMGRLEEAKVCYLKAIETQPQFA 295
Query: 139 LAES-----YFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFL 193
+A S + QG+ AI + K L + Y +G+ + F+ A+S
Sbjct: 296 VAWSNLGCVFNSQGEIWLAIHHFEK---AVTLDPNFLDAYINLGNVLKEARIFDRAVSAY 352
Query: 194 EKSLEFDEKPETLY-KIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTL----- 247
++L ++ +A +Y E AI +K+ + F + A L
Sbjct: 353 LRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANALKEKGS 412
Query: 248 --EANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHD 305
EA Q + ALE+ N + KI A R + AL E++
Sbjct: 413 VVEAEQMYMKALELCPTHADSQNNLANIKREQGKI-------EDATRLYLKAL---EIYP 462
Query: 306 ETVFLLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAH-------KALENDSEAAAL 358
E +NL + + +N FA A+ K + + S A A
Sbjct: 463 EFAAAHSNLASILQQ-QGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIAC 521
Query: 359 YEELIQTNLSENPEFLEDYIDFL---KEIGQISKTEPIIEQYLELVPD 403
Y IQ NP F + + + K+ G +++ L+L PD
Sbjct: 522 YNRAIQI----NPAFADAHSNLASIHKDAGNMAEAIQSYSTALKLKPD 565
Score = 43.8 bits (101), Expect = 0.003
Identities = 49/252 (19%), Positives = 105/252 (41%), Gaps = 12/252 (4%)
Query: 21 NSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNG 80
N +++ LK +A+LA G E++K + + DP L+ L+ I
Sbjct: 119 NGVSETLKK-----VAELAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLLSAINFQTK 173
Query: 81 NLDEALNY-LYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA- 138
NL++++ Y + I VN++ A + + Y+ +G + A+ + A +L + +
Sbjct: 174 NLEKSMQYSMLAIKVNNQ-CAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYIN 232
Query: 139 LAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLE 198
LA + GD A+T Y + ++ + +G+ +G E A K++E
Sbjct: 233 LAAALVSGGDLEQAVTAYFNALQ---INPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIE 289
Query: 199 FDEKPETLY-KIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAAL 257
+ + + ++ AI +F++ +D FL+ + L+ + F A+
Sbjct: 290 TQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 349
Query: 258 EMAKKGMKKNPN 269
+ + + N
Sbjct: 350 SAYLRALNLSGN 361
gi|687844 (U21320) contains TPR domain-like repeats [Caenorhabditis elegans]
Length = 1194
Score = 53.5 bits (126), Expect = 3e-06
Identities = 57/223 (25%), Positives = 97/223 (42%), Gaps = 22/223 (9%)
Query: 36 ADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVN 95
+DL ++ MG ++E++ Y + + P+ NL + G + A+++ +
Sbjct: 308 SDLGNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTL 367
Query: 96 DENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAIT 154
D N++ A I + ++ + F+ A+S A LS + + LA Y+EQG AI
Sbjct: 368 DPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAID 427
Query: 155 EYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYG 214
Y K I + D+Y L N + EK + E +Y AL
Sbjct: 428 TYKK----------AIDLQPHFPDAYCNLAN-----ALKEKGSVVE--AEQMYMKALELC 470
Query: 215 ETHNETR-AIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAA 256
TH +++ +AN KR E+ +E + Y + LE EF AA
Sbjct: 471 PTHADSQNNLANIKR-EQGKIE--DATRLYLKALEIYPEFAAA 510
Score = 48.8 bits (114), Expect = 8e-05
Identities = 92/408 (22%), Positives = 156/408 (37%), Gaps = 53/408 (12%)
Query: 23 LAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNL 82
LA + N +E ++L Y + G + ++ + Y + PE D INLA G+L
Sbjct: 227 LAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDL 286
Query: 83 DEALN-YLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLIT---FA 138
++A+ Y + +N + Y +DL G+ A+ +LEEA+ + T FA
Sbjct: 287 EQAVTAYFNALQINPDLYCVR----SDL----GNLLKAMGRLEEAKVCYLKAIETQPQFA 338
Query: 139 LAES-----YFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFL 193
+A S + QG+ AI + K L + Y +G+ + F+ A+S
Sbjct: 339 VAWSNLGCVFNSQGEIWLAIHHFEK---AVTLDPNFLDAYINLGNVLKEARIFDRAVSAY 395
Query: 194 EKSLEFDEKPETLY-KIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTL----- 247
++L ++ +A +Y E AI +K+ + F + A L
Sbjct: 396 LRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANALKEKGS 455
Query: 248 --EANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHD 305
EA Q + ALE+ N + KI A R + AL E++
Sbjct: 456 VVEAEQMYMKALELCPTHADSQNNLANIKREQGKI-------EDATRLYLKAL---EIYP 505
Query: 306 ETVFLLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAH-------KALENDSEAAAL 358
E +NL + + +N FA A+ K + + S A A
Sbjct: 506 EFAAAHSNLASILQQ-QGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIAC 564
Query: 359 YEELIQTNLSENPEFLEDYIDFL---KEIGQISKTEPIIEQYLELVPD 403
Y IQ NP F + + + K+ G +++ L+L PD
Sbjct: 565 YNRAIQI----NPAFADAHSNLASIHKDAGNMAEAIQSYSTALKLKPD 608
Score = 42.2 bits (97), Expect = 0.008
Identities = 48/252 (19%), Positives = 104/252 (41%), Gaps = 12/252 (4%)
Query: 21 NSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNG 80
N +++ LK + +LA G E++K + + DP L+ L+ I
Sbjct: 162 NGVSETLKK-----VTELAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLLSAINFQTK 216
Query: 81 NLDEALNY-LYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA- 138
NL++++ Y + I VN++ A + + Y+ +G + A+ + A +L + +
Sbjct: 217 NLEKSMQYSMLAIKVNNQ-CAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYIN 275
Query: 139 LAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLE 198
LA + GD A+T Y + ++ + +G+ +G E A K++E
Sbjct: 276 LAAALVSGGDLEQAVTAYFNALQ---INPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIE 332
Query: 199 FDEKPETLY-KIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAAL 257
+ + + ++ AI +F++ +D FL+ + L+ + F A+
Sbjct: 333 TQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 392
Query: 258 EMAKKGMKKNPN 269
+ + + N
Sbjct: 393 SAYLRALNLSGN 404
emb|CAA18877.1| (AL023287) tpr domain protein [Schizosaccharomyces pombe]
Length = 1102
Score = 53.1 bits (125), Expect = 4e-06
Identities = 59/281 (20%), Positives = 121/281 (42%), Gaps = 26/281 (9%)
Query: 58 IMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENY-IAALIKIADLYQFEGDF 116
++S + ET + LAE+ +D D+AL+ Y+ + Y I A+++IA + + F
Sbjct: 329 LISLNEETWIQIGRLAELFDDQ---DKALS-AYESALRQNPYSIPAMLQIATILRNREQF 384
Query: 117 ETAISKLEEARELSDSP-LITFALAESYFEQGDYSAAITEYAKLSERKILHETKI----S 171
AI + + I AL Y Q D S A + Y R+ L+ K
Sbjct: 385 PLAIEYYQTILDCDPKQGEIWSALGHCYLMQDDLSRAYSAY-----RQALYHLKDPKDPK 439
Query: 172 IYQRIGDSYAQLGNFENA----ISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFK 227
++ IG Y + G+ E+A + L F++ E +++ ++Y + H +++ F+
Sbjct: 440 LWYGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLELFR 499
Query: 228 RL---EKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFK- 283
+ + L+ E +E+K A E ++ + + PN +L +C +
Sbjct: 500 HILDNPPKPLTVLDIYFQIGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQ 559
Query: 284 ---LKDKAAAERYLVDALNLPELHDETVFLLANLYFNEEDF 321
++ A +YL +L + ++ +L+ Y ++ +
Sbjct: 560 SSSFTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKY 600
sp|Q58350|Y940_METJA HYPOTHETICAL PROTEIN MJ0940 >gi|2129316|pir||D64417 transformation
sensitive protein homolog - Methanococcus jannaschii
>gi|1591608 (U67537) transformation sensitive protein
[Methanococcus jannaschii]
Length = 318
Score = 52.7 bits (124), Expect = 5e-06
Identities = 75/339 (22%), Positives = 130/339 (38%), Gaps = 52/339 (15%)
Query: 64 ETTDYLINLAEIAE-----DNGNLDEALNYLYQ-IPVNDENYIAALIKIADLYQFEGDFE 117
ET+D L++L + + D GNL E+L YL + + +N + A +K L GD
Sbjct: 10 ETSDVLLSLTYLIKSYEYRDRGNLLESLYYLDKALELNPDFKFAKFLKAISL-AILGDIN 68
Query: 118 TAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIG 177
+I LE+ S+ P+ Y +G
Sbjct: 69 KSIECLEDITSNSNDPVA-------------------------------------YALLG 91
Query: 178 DSYAQLGNFENAISFLEKSLEFDEKPETLYKIALL-YGETHNETRAIANFKRLEKMDVEF 236
Y LGNF+NA+ EKSL +EK T + + +L G + + RL F
Sbjct: 92 QLYELLGNFDNALECYEKSLGIEEKFATAFFLKVLCLGLSGKYDELLKCCDRLISFAPNF 151
Query: 237 LNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERY--- 293
+ + A L ++ AL K ++ N ++ + I ++ + A +Y
Sbjct: 152 IPAYIIKANMLRKLGRYEEALACVNKVLELKENDTNAIYLKALILNRIGNCDEALKYYEK 211
Query: 294 LVDALNLP--ELHDETVFLLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKALEN 351
L+D LN+ E+ E ++L + FN+ D + W F G +N
Sbjct: 212 LIDELNVTWIEVIREAIYL--SFLFNKLDKAEKYIEMGLKLRPDDASLWYFKGKLYEKQN 269
Query: 352 DSEAAALYEELIQTNLSENPEFLEDYIDFLKEIGQISKT 390
E A Y + + + L L+++G+I ++
Sbjct: 270 KFEEALKYYNKAIQLMPHHTKALLAKARVLEKLGRIEES 308
gb|AAF26789.1|AC016829_13 (AC016829) putative O-linked GlcNAc transferase [Arabidopsis
thaliana]
Length = 977
Score = 51.5 bits (121), Expect = 1e-05
Identities = 60/296 (20%), Positives = 115/296 (38%), Gaps = 13/296 (4%)
Query: 36 ADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVN 95
++L M+ G I E+ Y + + P NLA + ++G+L+ AL Y +
Sbjct: 193 SNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKL 252
Query: 96 DENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAIT 154
+ A + + ++Y+ G AI + A ++ + + F +A Y+EQG AI
Sbjct: 253 KPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIR 312
Query: 155 EYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFD-EKPETLYKIALLY 213
Y + R + Y +G++ +G + A+ + L P+ + + +Y
Sbjct: 313 HYKQALSR---DPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIY 369
Query: 214 GETHNETRAIANFKR----LEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPN 269
E + A + FK + F N + Y Q + A+ + ++ +P
Sbjct: 370 MEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQ----QGNYSDAISCYNEVLRIDPL 425
Query: 270 AVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNEEDFEAVI 325
A L ++ A + + A+N E LA+ Y + EA I
Sbjct: 426 AADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAI 481
Score = 47.6 bits (111), Expect = 2e-04
Identities = 46/207 (22%), Positives = 87/207 (41%), Gaps = 5/207 (2%)
Query: 24 AKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLD 83
A ++ +++ ++A G +D + + Y Q +S DP + NL +D G +D
Sbjct: 283 ALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVD 342
Query: 84 EALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITF-ALAES 142
EA+ Q N+ A+ + ++Y A S + ++ F LA
Sbjct: 343 EAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAII 402
Query: 143 YFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEF-DE 201
Y +QG+YS AI+ Y +E + G++Y ++G AI ++ F
Sbjct: 403 YKQQGNYSDAISCY---NEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPT 459
Query: 202 KPETLYKIALLYGETHNETRAIANFKR 228
E +A Y ++ + AI ++K+
Sbjct: 460 MAEAHANLASAYKDSGHVEAAITSYKQ 486
gb|AAD17225.1| (AF117151) tetratricopeptide repeat protein; TprN [Nostoc
punctiforme]
Length = 265
Score = 50.0 bits (117), Expect = 4e-05
Identities = 46/181 (25%), Positives = 87/181 (47%), Gaps = 6/181 (3%)
Query: 115 DFETAISKLEEARELSD-SPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIY 173
+F+ AI+ L++A+ L+ + I FAL + F+Q +Y AA+ Y K+ ++
Sbjct: 82 EFDGAIASLKKAQSLNPKNGDILFALGSANFQQKNYQAAVVNYQ--DGLKLKPNDPEGLF 139
Query: 174 QRIGDSYAQLGNFENAISFLEKSLEFDEK-PETLYKIALLYGETHNETRAIANFKRLEKM 232
+G++Y LG +AI+ +K++ D+K L I L+ E N + AI ++ +
Sbjct: 140 D-LGNAYYLLGKLPDAIAQYDKAVSQDKKFWPALNNIGLINYEQGNTSEAIKRWQSAVTL 198
Query: 233 DVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAER 292
D + LA A L + L + ++G+ A+ + + + F LK+ +R
Sbjct: 199 DKQAAEPLLALAVALYTQGDASGELRLRQQGLSLGEAALRIDQRYANLNF-LKENLWGDR 257
Query: 293 Y 293
Y
Sbjct: 258 Y 258
ref|NP_006522.1|| Probe hTg737 (polycystic kidney disease, autosomal recessive, in)
>gi|755486 (U20362) mutations in the mouse Tg737 gene
cause polycystic kidney disease [Homo sapiens]
Length = 824
Score = 49.2 bits (115), Expect = 6e-05
Identities = 55/266 (20%), Positives = 96/266 (35%), Gaps = 39/266 (14%)
Query: 46 GFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIK 105
G +++ + Y + + D T+ L N+ E LDEAL+ ++ N L +
Sbjct: 498 GDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQ 557
Query: 106 IADLYQFEGDFETAISKL-EEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKI 164
IA++Y+ + AI L + + P + L E Y +GD S A Y
Sbjct: 558 IANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYY-------- 609
Query: 165 LHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIA 224
E F E + + Y +T +AI
Sbjct: 610 ----------------------------YESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 225 NFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKIC--F 282
F+R + + ++L A + ++ AL+ K +K P V L F ++C
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 283 KLKDKAAAERYLVDALNLPELHDETV 308
LKD R L + E+ ++ +
Sbjct: 702 GLKDAQEYARKLKRLEKMKEIREQRI 727
emb|CAA76834| (Y17720) SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 48.8 bits (114), Expect = 8e-05
Identities = 63/279 (22%), Positives = 109/279 (38%), Gaps = 31/279 (11%)
Query: 13 QGDLIGMQNSLAKALKNDNSE---------MLADLAEYMQMMGFIDESQKIYDQIMSEDP 63
+G L+ S KALK D S +L D+ +++ G E + Y + + D
Sbjct: 129 EGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLKLAGNSQEGIQKYYEAIKIDS 188
Query: 64 ETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKL 123
NL + + D ALN + + Y A + +Y+ GD E+AI+
Sbjct: 189 HYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACY 248
Query: 124 EEARELSDSPLITFA----------LAESYFEQGDYSAAITEYAKLSERKILHETKISIY 173
E R L+ SP A L +GD + + Y K + +
Sbjct: 249 E--RCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAM--- 303
Query: 174 QRIGDSYAQLGNFENAISFLEKSLEFDEK-PETLYKIALLYGETHNETRAIANFKRLEKM 232
+G +Y ++ F+ AI F E + F+ E + ++Y + N +A+ ++ +
Sbjct: 304 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALTI 363
Query: 233 DVEF---LNYELAYAQTLEANQEFKAALEMAKKGMKKNP 268
F LN L T++ + AA M +K + NP
Sbjct: 364 KPNFSQSLN-NLGVVYTVQGKMD--AAASMIEKAIIANP 399
gi|2984229 (AE000766) putative protein [Aquifex aeolicus]
Length = 853
Score = 48.8 bits (114), Expect = 8e-05
Identities = 92/416 (22%), Positives = 158/416 (37%), Gaps = 73/416 (17%)
Query: 23 LAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNL 82
+ K +K+ + E L E + DE K ++I + P+ Y GN
Sbjct: 376 ILKNVKDRDREYYRLLLEVLYSTDMEDEFLKTLEEIAGKYPKL--YKEYYGWYLFKKGNW 433
Query: 83 DEALNYLYQIPVNDENYIAALI--------KIADLYQFEGDFETAISKLEEAREL----- 129
EA Y D Y A+ K+ +L + + +E + K + A L
Sbjct: 434 LEAEKYF------DNPYYKAVAYFNAGDYEKVLELLKDDNSYEARVLKAKAAISLGKGEL 487
Query: 130 ------SDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQL 183
+++P + SYF G+Y AI + KL++ + E ++ ++ DSY L
Sbjct: 488 ARKFLYNETPEEVYLTGLSYFIDGEYEKAIPYFEKLTQNE---EYRLKALLKLADSYYNL 544
Query: 184 GNFENAISFLEKSL-EFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELA 242
G E A + L ++ + PE K ALL G E A K LEK+ +F
Sbjct: 545 GQKEKARAIYTLILSKYSQNPEA--KEALL-GVAQIEIEAPT--KELEKIVKDF------ 593
Query: 243 YAQTLEANQEFKAALEMAKKGMKKNPNAVPLLH----FASKICFKLKDKAAAERYLVDAL 298
+K PN+ PLL ++I K K A+ L +
Sbjct: 594 ---------------------EEKYPNS-PLLPELKLQLARIYAKEGRKVEAQFILRKLV 631
Query: 299 NLPELHDETVFLLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKALENDSEAAAL 358
N PE D LLA++ N + E ++ A+ FA E L
Sbjct: 632 NNPEYRDRASLLLADVVDNPSEKERIL-INLLKSKDKAVAEEAFAKLVTFYEERGNLLKL 690
Query: 359 YEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDL 414
L + + E + ++ Y+ ++G+I + E + + ++ P+ E ++ + L
Sbjct: 691 ARLLEKRSDPEKVKAIQIYL----KLGRIKEAERLFNRLIKKYPESEELKEVALKL 742
gi|2688100 (AE001131) surface-located membrane protein 1 (lmp1) [Borrelia
burgdorferi]
Length = 1119
Score = 48.8 bits (114), Expect = 8e-05
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 21 NSLAKALKNDNS--EMLADLAEYMQMMGFIDESQK-------IYDQIMSEDPETTDYLIN 71
N L ++L+ N ++ + +EY+ + I+ ++ +Y ++ ++PE T IN
Sbjct: 925 NKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYIN 984
Query: 72 LAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSD 131
LA+ E +GN +A++ L +I +N N + AL + LY+ E +++ AI E+A SD
Sbjct: 985 LAKAYEKSGNKSQAISTLEKI-INKNNKL-ALNNLGILYKKEKNYQKAIEIFEKAIINSD 1042
Query: 132 SPLITFALAESYFEQGDYSAA---ITEYAKL--SERKILHETKISIYQRIGDSYAQLGNF 186
+ LA + E D + A + EY KL + + LH I Y N
Sbjct: 1043 IE-AKYNLATTLIEINDNTRAKDLLREYTKLKPNNPEALHALGIIEYNE--------NNN 1093
Query: 187 ENAISFLEKSLEFDEKPETLYKI 209
+ + L K +K E + KI
Sbjct: 1094 DQTLRELIKKFPNYKKNENIKKI 1116
ref|NP_006810.1|| stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)
>gi|400042|sp|P31948|IEFS_HUMAN TRANSFORMATION-SENSITIVE
PROTEIN IEF SSP 3521 >gi|539700|pir||A38093
transformation-sensitive protein IEF SSP 3521 - human
>gi|184565 (M86752) transformation-sensitive protein
[Homo sapiens]
Length = 543
Score = 48.0 bits (112), Expect = 1e-04
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 115 DFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKL----SERKILHETK 169
DF+TA+ ++A+EL + + A YFE+GDY+ K E + +
Sbjct: 240 DFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQI 299
Query: 170 ISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
Y RIG+SY + +++AI F KSL P+ L K +A K
Sbjct: 300 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKC----------QQAEKILKEQ 349
Query: 230 EKMDVEFLNYELAYAQTLEANQ-----EFKAALEMAKKGMKKNPNAVPL 273
E++ ++N +LA + + N+ ++ A++ + +K+NP L
Sbjct: 350 ERL--AYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKL 396
ref|NP_033402.1|| transgene insert site 737, insertional mutation, polycystic kidney
disease >gi|2137649|pir||I49564 polycystic kidney
disease-related protein - mouse >gi|499647 (L31959) [Mus
musculus (strain C3HF/RL) ORF mRNA, complete cds.], gene
product [Mus musculus]
Length = 824
Score = 47.3 bits (110), Expect = 2e-04
Identities = 53/225 (23%), Positives = 97/225 (42%), Gaps = 12/225 (5%)
Query: 46 GFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIK 105
G +++ + Y + + D T+ L N+ + LDEAL+ ++ N L +
Sbjct: 498 GDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDSFLKLHAILRNSAQVLCQ 557
Query: 106 IADLYQFEGDFETAISKLEEAREL--SDSPLITFALAESYFEQGDYSAAITEYAKLSERK 163
IA++Y+ D AI L + + +DS ++ L E Y +GD S A Y E
Sbjct: 558 IANIYELMEDPNQAIEWLMQLISVVPTDSQALS-KLGELYDSEGDKSQAFQYY---YESY 613
Query: 164 ILHETKISIYQRIGDSYAQLGNFENAISFLEK-SLEFDEKPETLYKIALLYGETHNETRA 222
+ I + + +G Y E AI + E+ SL + + +A + + N +A
Sbjct: 614 RYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKA 673
Query: 223 IANFKRLEKM---DVEFLNY--ELAYAQTLEANQEFKAALEMAKK 262
+ +K + + +VE L + L L+ QE+ L+ +K
Sbjct: 674 LDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEK 718
dbj|BAA30049| (AP000004) 753aa long hypothetical protein [Pyrococcus horikoshii]
Length = 753
Score = 46.9 bits (109), Expect = 3e-04
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 47 FIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALI-- 104
F+ + + + + +S E YL ++ + + ++ + Y I V I L+
Sbjct: 380 FVHDMVREFVREVSNQEEKEVYLRHVNFLLKSKTPINFLRAFKYAIKVGSSELIRNLVEL 439
Query: 105 KIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKI 164
++ + Y+ DF +L E+ D+P +A ++G + AI + K +E +
Sbjct: 440 RVKEFYRIIVDFPRMYQRL--LMEVEDNPYAKIEIAIIEVQRGLFEKAI-KLLKEAEPYV 496
Query: 165 LHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGE 215
K IY + D+Y +L N E A +L+K+ E EK +Y Y E
Sbjct: 497 DEFFKCEIYSWLADAYMELENLEKAERYLKKTKEIVEKINDMYAWFSYYAE 547
pir||A41604 myosin heavy chain, smooth muscle, long splic form - rabbit
Length = 1972
Score = 46.5 bits (108), Expect = 4e-04
Identities = 54/230 (23%), Positives = 99/230 (42%), Gaps = 23/230 (10%)
Query: 38 LAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDE 97
LA+ + +G + Q + + E + + L ++ ++ +L E L+ + N E
Sbjct: 1306 LAKEVASLG--SQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQEQLDEEMEAKQNLE 1363
Query: 98 NYIAAL-IKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEY 156
+I+ L I+++D + DF + + LEE ++ + ES +Q + AA Y
Sbjct: 1364 RHISTLNIQLSDSKKKLQDFASTVESLEEGKKRFQKEI------ESLTQQYEEKAAA--Y 1415
Query: 157 AKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLE-KSLEFDEKPETLYKIALLYGE 215
KL + TK + Q + D L N +S LE K +FD+ I+ Y +
Sbjct: 1416 DKLEK------TKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQLLAEEKNISSKYAD 1469
Query: 216 THNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMK 265
+ A A K + + L+ A + LEA +E + +M K M+
Sbjct: 1470 ERDRAEAEAREK-----ETKALSLARALEEALEAKEELERTNKMLKAEME 1514
sp|P35748|MYST_RABIT MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOFORM (SMMHC) >gi|165490 (M77812)
myosin heavy chain [Oryctolagus cuniculus]
Length = 1972
Score = 46.5 bits (108), Expect = 4e-04
Identities = 54/230 (23%), Positives = 99/230 (42%), Gaps = 23/230 (10%)
Query: 38 LAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDE 97
LA+ + +G + Q + + E + + L ++ ++ +L E L+ + N E
Sbjct: 1306 LAKEVASLG--SQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQEQLDEEMEAKQNLE 1363
Query: 98 NYIAAL-IKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEY 156
+I+ L I+++D + DF + + LEE ++ + ES +Q + AA Y
Sbjct: 1364 RHISTLNIQLSDSKKKLQDFASTVESLEEGKKRFQKEI------ESLTQQYEEKAAA--Y 1415
Query: 157 AKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLE-KSLEFDEKPETLYKIALLYGE 215
KL + TK + Q + D L N +S LE K +FD+ I+ Y +
Sbjct: 1416 DKLEK------TKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQLLAEEKNISSKYAD 1469
Query: 216 THNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMK 265
+ A A K + + L+ A + LEA +E + +M K M+
Sbjct: 1470 ERDRAEAEAREK-----ETKALSLARALEEALEAKEELERTNKMLKAEME 1514
gb|AAD36762.1|AE001810_1 (AE001810) conserved hypothetical protein [Thermotoga maritima]
Length = 357
Score = 46.1 bits (107), Expect = 5e-04
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 36/266 (13%)
Query: 9 DFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDY 68
D L++GD ++ + K +N E ++ + +DE+ +Y+ ++ PE ++
Sbjct: 29 DLLYEGDWELLKEDMKK---KENIMKEVQTCEKLEKVVHLDET--VYEPLIF--PEFQEW 81
Query: 69 LINLAEIAEDNGNLDEALNYLYQIPVN--DENYIAALIKIA-DLYQFEGDFETAISKLEE 125
L +D N+ +L LY + + D N L IA D+ +F D +
Sbjct: 82 LREENITPKDFKNV--SLKGLYDLALEYADRN----LYDIAHDIIKFMLDID---ENYAP 132
Query: 126 ARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGN 185
A EL S L+ EQG I K E + + Y +G++Y LG+
Sbjct: 133 AYELKGSLLV---------EQGKIEEGIKFLDKAVE---IDPWLVQAYASLGEAYYNLGD 180
Query: 186 FENAISFLEKSLEFDEKPE-TLYKIALLYGETHNETRAIANFKRLEKMDVEFLN--YELA 242
+E AI + E+ LE++ + T + I Y E + + A+ +RL ++D + + Y+L+
Sbjct: 181 YEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDLAVKTLERLLEIDPDNIPALYQLS 240
Query: 243 YAQTLEANQEFKAALEMAKKGMKKNP 268
N+E A EM +K M P
Sbjct: 241 QLYRELGNEE--KAREMEEKIMNCKP 264
sp|P10587|MYSG_CHICK MYOSIN HEAVY CHAIN, GIZZARD SMOOTH MUSCLE
Length = 1979
Score = 46.1 bits (107), Expect = 5e-04
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 27/246 (10%)
Query: 22 SLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGN 81
SL ++ N ++ D+A + Q + + E + + L ++ +D +
Sbjct: 1300 SLLNEAESKNIKLTKDVATLGSQL------QDTQELLQEETRQKLNVTTKLRQLEDDKNS 1353
Query: 82 LDEALNYLYQIPVNDENYIAAL-IKIADLYQFEGDFETAISKLEEARELSDSPLITFALA 140
L E L+ + N E +I+ L I+++D + +F + +EE ++ +
Sbjct: 1354 LQEQLDEEVEAKQNLERHISTLTIQLSDSKKKLQEFTATVETMEEGKKKLQREI------ 1407
Query: 141 ESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLE-KSLEF 199
ES +Q + AA Y KL + TK + Q + D L N +S LE K +F
Sbjct: 1408 ESLTQQFEEKAA--SYDKLEK------TKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKF 1459
Query: 200 DEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEM 259
D+ I+ Y + + A A K + + L+ A + LEA +E + +M
Sbjct: 1460 DQMLAEEKNISSKYADERDRAEAEAREK-----ETKALSLARALEEALEAKEELERTNKM 1514
Query: 260 AKKGMK 265
K M+
Sbjct: 1515 LKAEME 1520
gi|3322760 (AE001223) T. pallidum predicted coding region TP0471 [Treponema
pallidum]
Length = 469
Score = 46.1 bits (107), Expect = 5e-04
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 20/243 (8%)
Query: 30 DNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYL 89
D E +A+ I+E+ K Y ++ DP DY + ++ E D A Y
Sbjct: 115 DEVEFRKTIAQLYLQFDQIEEALKEYTLLIRLDPTCADYHYRIGQLFERKNVTDRAAAYY 174
Query: 90 YQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQG-- 147
Q D + AA + L G A ++L+ L A AE+ F QG
Sbjct: 175 RQCIGMDAAHPAAHAALGSLLLRSGHLAEARAELDTVLALEP------ANAEALFCQGQL 228
Query: 148 -----DYSAAITEYAKLSERKILHETKIS----IYQRIGDSYAQLGNFENAISFLEKSLE 198
+Y+AA+ + + S +L + + Y D + F+ A+ +S E
Sbjct: 229 LRKEREYAAALRSFEQASRSPVLRQKCFTERGCCYMDAKDVDRAIVEFDRALRCKSQSGE 288
Query: 199 FDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEF--LNYELAYAQTLEANQEFKAA 256
+E + Y +A Y + + +AI ++ + F + +LA Q + N K
Sbjct: 289 -NEDLQIRYLLASCYEKKRDVEKAIEQWEAINARSAGFKDVTIKLAQYQDIRLNDRMKEY 347
Query: 257 LEM 259
L +
Sbjct: 348 LTL 350
pir||S03166 myosin heavy chain, gizzard smooth muscle - chicken
>gi|63634|emb|CAA29793| (X06546) MHC (AA 1-1979) [Gallus
gallus]
Length = 1979
Score = 46.1 bits (107), Expect = 5e-04
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 27/246 (10%)
Query: 22 SLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGN 81
SL ++ N ++ D+A + Q + + E + + L ++ +D +
Sbjct: 1300 SLLNEAESKNIKLTKDVATLGSQL------QDTQELLQEETRQKLNVTTKLRQLEDDKNS 1353
Query: 82 LDEALNYLYQIPVNDENYIAAL-IKIADLYQFEGDFETAISKLEEARELSDSPLITFALA 140
L E L+ + N E +I+ L I+++D + +F + +EE ++ +
Sbjct: 1354 LQEQLDEEVEAKQNLERHISTLTIQLSDSKKKLQEFTATVETMEEGKKKLQREI------ 1407
Query: 141 ESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLE-KSLEF 199
ES +Q + AA Y KL + TK + Q + D L N +S LE K +F
Sbjct: 1408 ESLTQQFEEKAA--SYDKLEK------TKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKF 1459
Query: 200 DEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEM 259
D+ I+ Y + + A A K + + L+ A + LEA +E + +M
Sbjct: 1460 DQMLAEEKNISSKYADERDRAEAEAREK-----ETKALSLARALEEALEAKEELERTNKM 1514
Query: 260 AKKGMK 265
K M+
Sbjct: 1515 LKAEME 1520
dbj|BAA17814| (D90909) hypothetical protein [Synechocystis sp.]
Length = 294
Score = 45.7 bits (106), Expect = 7e-04
Identities = 40/162 (24%), Positives = 81/162 (49%), Gaps = 7/162 (4%)
Query: 106 IADLYQFEGDFETAISKLEEARELSDSPL-ITFALAESYFEQGDYSAAI-TEYAKLSERK 163
+ LY + + E I+ L++A L+ I F L +YF++G Y A+ A L++R
Sbjct: 89 LGTLYLQQEEVEPGITVLKKAEALAPEEAGIKFTLGNAYFQKGQYDQAVEVLLAGLAQRP 148
Query: 164 ILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEK-PETLYKIALLYGETHNETRA 222
+T +++ +G++Y +L + +A++ +K+L+ +E+ L I L+ E A
Sbjct: 149 ---DTPAALFD-LGNAYLKLVKYPDAVTAYQKALKAEEQFWPALNNIGLIEYEQGKIDTA 204
Query: 223 IANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGM 264
+ ++ + K+D E +LA A L + + L A+ +
Sbjct: 205 LKRWQEVIKIDSEQPEPQLAIAVALYKQGKTEEGLRKAQDAL 246
gi|2984175 (AE000762) hypothetical protein [Aquifex aeolicus]
Length = 342
Score = 45.3 bits (105), Expect = 0.001
Identities = 40/162 (24%), Positives = 82/162 (49%), Gaps = 12/162 (7%)
Query: 20 QNSLAKALK-NDN-SEMLADLAEYMQMMGFIDESQKIYDQIMSED--PETTDYLINLAEI 75
+ S KAL N N SE +L +G +E+ K + +++ + + LA++
Sbjct: 79 EESFKKALSINPNYSEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKV 138
Query: 76 AEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELS--DSP 133
E +L + YL + + N++ A +++A Y+ G +E A K+ ++ L+ + P
Sbjct: 139 YEAKQDLKNYVRYLEKAVAYNPNFVQAQLELAQAYENLGKYEEA-EKIYKSLLLNGFNKP 197
Query: 134 LITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQR 175
+ + LAE Y+++GDY E A+ +++L++ ++ QR
Sbjct: 198 FLKYKLAEVYYKKGDY-----ERAREIIKELLYKENLTNEQR 234
dbj|BAA36971| (D10667) smooth muscle myosin heavy chain [Homo sapiens]
Length = 1052
Score = 44.5 bits (103), Expect = 0.002
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 52 QKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAAL-IKIADLY 110
Q + + E + + L ++ E+ +L + L+ + N E +I+ L I+++D
Sbjct: 432 QDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 491
Query: 111 QFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKI 170
+ DF + + LEE ++ + E+ +Q + AA Y KL + TK
Sbjct: 492 KKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAA--YDKLEK------TKN 537
Query: 171 SIYQRIGDSYAQLGNFENAISFLE-KSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
+ Q + D L N +S LE K +FD+ I+ Y + + A A K
Sbjct: 538 RLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREK-- 595
Query: 230 EKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMK 265
+ + L+ A + LEA +E + +M K M+
Sbjct: 596 ---ETKALSLARALEEALEAKEELERTNKMLKAEME 628
gi|2622708 (AE000918) O-linked GlcNAc transferase [Methanobacterium
thermoautotrophicum]
Length = 351
Score = 44.5 bits (103), Expect = 0.002
Identities = 63/247 (25%), Positives = 97/247 (38%), Gaps = 15/247 (6%)
Query: 30 DNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEAL-NY 88
D M+ A+ + G +S+ Y + DP L L + G DEAL NY
Sbjct: 96 DEKAMITRRADILFDSGKFSKSELCYTAALRIDPNDVYILNRLGDNLTRLGRFDEALENY 155
Query: 89 LYQIPVNDEN-YIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQG 147
I + EN YI + I L G + A+ E A ++ P + + G
Sbjct: 156 RRAIMIEPENPYIWNNMAITLLN--AGRVDEALEASERALKIKHDPDLLYWRGVMLEVAG 213
Query: 148 DYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAI----SFLEKSLEFDEKP 203
A+ Y + E + ++ G+ + LG E AI S LE +LE ++ P
Sbjct: 214 KPLEALESYERSLE---IDPRNAEVWTARGNLLSDLGRMEEAIESYNSALELALEDEQDP 270
Query: 204 ETLYK--IALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAK 261
+ ALL E NE A+ ++R +M+ E Y L + F ALE
Sbjct: 271 NVWNRKGNALLELERFNE--ALECYRRAIEMEPENDVYWTNMGVALLELERFDEALEAFN 328
Query: 262 KGMKKNP 268
+ + NP
Sbjct: 329 RALMINP 335
sp|P35749|MYST_HUMAN MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOFORM (SMMHC)
>gi|2104553|gb|AAC31665.1| (AF001548) Myosin heavy chain
(MHY11) (5'partial) [Homo sapiens]
Length = 1857
Score = 44.5 bits (103), Expect = 0.002
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 52 QKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAAL-IKIADLY 110
Q + + E + + L ++ E+ +L + L+ + N E +I+ L I+++D
Sbjct: 1203 QDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 1262
Query: 111 QFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKI 170
+ DF + + LEE ++ + E+ +Q + AA Y KL + TK
Sbjct: 1263 KKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAA--YDKLEK------TKN 1308
Query: 171 SIYQRIGDSYAQLGNFENAISFLE-KSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
+ Q + D L N +S LE K +FD+ I+ Y + + A A K
Sbjct: 1309 RLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREK-- 1366
Query: 230 EKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMK 265
+ + L+ A + LEA +E + +M K M+
Sbjct: 1367 ---ETKALSLARALEEALEAKEELERTNKMLKAEME 1399
sp|P56558|OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE
110 KD SUBUNIT (O-GLCNAC TRANSFERASE P110 SUBUNIT)
>gi|1931579 (U76557) O-GlcNAc transferase, p110 subunit
[Rattus norvegicus]
Length = 1036
Score = 44.5 bits (103), Expect = 0.002
Identities = 52/268 (19%), Positives = 111/268 (41%), Gaps = 49/268 (18%)
Query: 37 DLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVND 96
+LA ++ G + E++ Y+ + P D L NLA I + GN++EA+ +
Sbjct: 288 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 347
Query: 97 ENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEY 156
+ AA +A + Q +G + A+ +EA +S TFA A
Sbjct: 348 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP----TFADA---------------- 387
Query: 157 AKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEK-PETLYKIALLYGE 215
Y +G++ ++ + + A+ ++++ + + +A ++ +
Sbjct: 388 ----------------YSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 431
Query: 216 THNETRAIANFKRLEKMDVEFLNYELAYAQTLEA-------NQEFKAALEMAKKGMKKNP 268
+ N AIA+++ K+ +F + A L+ ++ K + + + ++K
Sbjct: 432 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAEQLEK-- 489
Query: 269 NAVPLLHFASKICFKLKD---KAAAERY 293
N +P +H + + L KA AER+
Sbjct: 490 NRLPSVHPHHSMLYPLSHGFRKAIAERH 517
sp|Q58741|YD45_METJA HYPOTHETICAL PROTEIN MJ1345 >gi|2128804|pir||H64467 hypothetical
protein MJ1345 - Methanococcus jannaschii >gi|1591987
(U67574) O-linked GlnNAc transferase [Methanococcus
jannaschii]
Length = 314
Score = 44.5 bits (103), Expect = 0.002
Identities = 72/267 (26%), Positives = 108/267 (39%), Gaps = 31/267 (11%)
Query: 54 IYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFE 113
+ D+I+ E E+ D + A I G D+AL Y + YI A +
Sbjct: 34 LIDKIL-EVRESPDVYVRKARILRTLGENDKALEYFDKALKLKPKYILANF-------LK 85
Query: 114 GDFETAISKLEEAREL---------SDSPLITFALAESYFEQGDYSAAITEYAKLSER-- 162
G ++ KLEEA+E+ SD P + + A + G+Y A+ K+ ++
Sbjct: 86 GALLVSLGKLEEAKEVFLKLCRLEKSDLP-VKYVTAFILKKLGEYDYALKIIDKILKKYP 144
Query: 163 --KILHETKISIYQRIGDSYAQLGNFENAISFLEKSLE-FDEKPETLYKIALLYGETHNE 219
I K I R G L F+NA+ K + K E L+K+ YGE
Sbjct: 145 KSAIAWAEKGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEILFKLGR-YGEALKC 203
Query: 220 TRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASK 279
+ + F+R K D+ L Y + Q L ALE KK +K NP+ L +
Sbjct: 204 LKKV--FERNNK-DIRALMYII---QILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGI 257
Query: 280 ICFKLKDKAAAERYLVDALNL-PELHD 305
I KL A +Y L + P + D
Sbjct: 258 ILNKLGKYNEAIKYFDKVLEINPNIPD 284
gi|1213541 (U50193) weak similarity to SP:YAD5_CLOAB (P33746) hypothetical
protein and to PIR:C48583 stress-inducible protein STI1
[Caenorhabditis elegans]
Length = 1115
Score = 44.5 bits (103), Expect = 0.002
Identities = 61/257 (23%), Positives = 108/257 (41%), Gaps = 26/257 (10%)
Query: 28 KNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDP-------ETTDYLINLAEIAEDNG 80
+N+N E + L +Q+ + S+ ++ S D E D L ++ I E
Sbjct: 378 RNENDEAIKTLKMALQIPRK-EPSKNLFQPKESADTHKISVQLELIDTLQHMKRIQEAET 436
Query: 81 NLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARE-LSDSPLITFAL 139
+ +AL P D+ IA A LY +G E A+ L++ + S+ L +
Sbjct: 437 TMTDALAEWAGQPEQDQLVIAQ----AQLYLTKGHVERALGILKKIQPGQSNFHLSRIKM 492
Query: 140 AESYFEQGD----YSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEK 195
AE Y E+ ++A E K+ E Y +GD++ ++ E+AI+F E+
Sbjct: 493 AEIYLEEKKDKRMFAACYRELLKV-------EATPGSYSLLGDAFMKVQEPEDAINFYEQ 545
Query: 196 SLEFDEKPETL-YKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFK 254
+L+ K L KI Y H ++A+ NF + N L A L + F+
Sbjct: 546 ALKMQSKDVQLAEKIGEAYVMAHLYSKAV-NFYESSMNIYKDKNMRLKLANLLLKLRNFE 604
Query: 255 AALEMAKKGMKKNPNAV 271
++ + +++P V
Sbjct: 605 KCEKVLRAPFERDPEPV 621
emb|CAA49154| (X69292) smooth muscle mysosin heavy chain [Homo sapiens]
Length = 881
Score = 44.5 bits (103), Expect = 0.002
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 52 QKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAAL-IKIADLY 110
Q + + E + + L ++ E+ +L + L+ + N E +I+ L I+++D
Sbjct: 227 QDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 286
Query: 111 QFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKI 170
+ DF + + LEE ++ + E+ +Q + AA Y KL + TK
Sbjct: 287 KKLQDFASTVEALEEGKKRFQKEI------ENLTQQYEEKAAA--YDKLEK------TKN 332
Query: 171 SIYQRIGDSYAQLGNFENAISFLE-KSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
+ Q + D L N +S LE K +FD+ I+ Y + + A A K
Sbjct: 333 RLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADERDRAEAEAREK-- 390
Query: 230 EKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMK 265
+ + L+ A + LEA +E + +M K M+
Sbjct: 391 ---ETKALSLARALEEALEAKEELERTNKMLKAEME 423
sp|P33746|YAD5_CLOAB HYPOTHETICAL 36.9 KD PROTEIN IN ADHE 5'REGON (ORF5)
>gi|421549|pir||S33433 hypothetical protein 5 -
Clostridium acetobutylicum >gi|298082|emb|CAA51342|
(X72831) ORF5 [Clostridium acetobutylicum] >gi|3790106
(L14817) transcriptional repressor [Clostridium
acetobutylicum]
Length = 318
Score = 44.5 bits (103), Expect = 0.002
Identities = 32/111 (28%), Positives = 60/111 (53%), Gaps = 6/111 (5%)
Query: 110 YQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKLSERKILHET 168
Y G+ E A+ A EL + I++ LA Y+ G Y AI + E+ I +
Sbjct: 109 YHILGEPERALKYFLRAVELQPNVGISYENLAWFYYLTGKYDKAIENF----EKAISMGS 164
Query: 169 KISIYQRIGDSYAQLGNFENAISFLEKSLEFD-EKPETLYKIALLYGETHN 218
S+Y+ +G +YA++G+++ + +L+K+L+ + EKP T + L +T++
Sbjct: 165 TNSVYRSLGITYAKIGDYKKSEEYLKKALDAEPEKPSTHIYFSYLKRKTND 215
pir||B36972 aad 5'-region hypothetical protein - Clostridium acetobutylicum
(ATCC 824)
Length = 318
Score = 44.5 bits (103), Expect = 0.002
Identities = 32/111 (28%), Positives = 60/111 (53%), Gaps = 6/111 (5%)
Query: 110 YQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKLSERKILHET 168
Y G+ E A+ A EL + I++ LA Y+ G Y AI + E+ I +
Sbjct: 109 YHILGEPERALKYFLRAVELQPNVGISYENLAWFYYLTGKYDKAIENF----EKAISMGS 164
Query: 169 KISIYQRIGDSYAQLGNFENAISFLEKSLEFD-EKPETLYKIALLYGETHN 218
S+Y+ +G +YA++G+++ + +L+K+L+ + EKP T + L +T++
Sbjct: 165 TNSVYRSLGITYAKIGDYKKSEEYLKKALDAEPEKPSTHIYFSYLKRKTND 215
gi|2688230 (AE001139) B. burgdorferi predicted coding region BB0326 [Borrelia
burgdorferi]
Length = 931
Score = 44.1 bits (102), Expect = 0.002
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 77 EDNGNLDEALNYLYQIPVN-DENYIAALIKIADLYQFEGDFETAISKLEEA--------- 126
++N N++ + Y+ + +N + NY AL + + GDF+ A L +A
Sbjct: 609 DNNVNMNSEIEYILRKILNKNPNYDKALFESGRYSYYIGDFKKAEVYLLKALNSFRHKNS 668
Query: 127 -RELSDSPLITFALAESYFEQGD-------YSAAITEYAKLSERKILHETK--ISIYQRI 176
+ D L LA+ Y + D A+++Y+ + ++ +K SIY++
Sbjct: 669 IEDAGDKILAYKILADIYEKTRDSLRASNIIGLALSDYSFYKKHNLIKGSKEISSIYEKQ 728
Query: 177 GDSYAQLGNFENAISFLEKSL-EFDEKPETLYKIALLYGETHNETRAIANFKRLEKM 232
GD L +F++AIS + ++ E + P+ YK+ LL +N A+ ++E M
Sbjct: 729 GDILRSLNDFKSAISSYKLAINEGVDYPDVYYKVGLLSYRENNYDDALKYLFKVESM 785
Score = 42.2 bits (97), Expect = 0.008
Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 49/309 (15%)
Query: 70 INLAEIAEDNGNLDEALNY-LYQ---IPVNDENYIAALIKIADLYQFE-GDFETAISKLE 124
I L E +E N LDE ++Y LY + + +NY ++ Y+ + +SK
Sbjct: 451 IGLGEHSEANSILDEVISYDLYDYDALVLKGDNYFKWAKTNSNYYKDSINSYTVVLSKYG 510
Query: 125 EARELSDSPLITFALAESYFEQG--DYSAAITEYAKLSERKILHETKISIY-QRIGDSYA 181
+ +E I F L +Y E S + + K +E + E + Y +++ D Y
Sbjct: 511 QKKE------ILFKLFNAYIEANLDTESDNVNNFIKSNEILDIDEVVYTKYAKKLVDKYI 564
Query: 182 QLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYEL 241
+ + L +L + L G+T+ + ++FKR + + L+
Sbjct: 565 SFVTYNQRANNLAINLNY------------LNGQTNLLNKEFSDFKRNDGRTIFKLD--- 609
Query: 242 AYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALN-- 299
+ N E + L +K + KNPN L + + + + D AE YL+ ALN
Sbjct: 610 ---NNVNMNSEIEYIL---RKILNKNPNYDKALFESGRYSYYIGDFKKAEVYLLKALNSF 663
Query: 300 -----LPELHDETVF--LLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKALEND 352
+ + D+ + +LA++Y D + + + F H ++
Sbjct: 664 RHKNSIEDAGDKILAYKILADIYEKTRD-----SLRASNIIGLALSDYSFYKKHNLIKGS 718
Query: 353 SEAAALYEE 361
E +++YE+
Sbjct: 719 KEISSIYEK 727
dbj|BAA18162| (D90912) hypothetical protein [Synechocystis sp.]
Length = 296
Score = 44.1 bits (102), Expect = 0.002
Identities = 46/174 (26%), Positives = 75/174 (42%), Gaps = 11/174 (6%)
Query: 83 DEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARE-LSDSPLITFALAE 141
D A +Y + ENY A + DF AI + A + L T+ L E
Sbjct: 73 DAAESYDNACQIQPENYWAWYDQGCVYLNEIDDFAQAIPCFQRALDYLPKDYWATYRLGE 132
Query: 142 SYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDE 201
SY G Y AAI A + + + + R D + + G++ A+ +KSLE
Sbjct: 133 SYRLSGQYEAAI---ASFRQTLTIRQDDFWSWYRQADCFRRWGHYAEALQCYKKSLEI-- 187
Query: 202 KPE---TLYKIALLYGETHNETRAIANFKRL--EKMDVEFLNYELAYAQTLEAN 250
+P ++ L+ + + RAIA + R ++D ++ YE+A Q L+ N
Sbjct: 188 RPNDYWAWFRQGELWQQIYRYGRAIACYHRALDVEVDDDYSWYEIALCQVLQKN 241
gi|3037137 (AF056198) Hsp70/Hsp90 organizing protein homolog [Drosophila
melanogaster]
Length = 489
Score = 43.8 bits (101), Expect = 0.003
Identities = 73/301 (24%), Positives = 123/301 (40%), Gaps = 36/301 (11%)
Query: 115 DFETAISKLEEARELSDSPLITFA--LAESYFEQGDYSAAITEYAKLSE--RKILHETKI 170
DFETA+ A E D ITF +A +FE+ +Y I + K E R+ + K+
Sbjct: 189 DFETALKHYHAAIE-HDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRESRADFKL 247
Query: 171 --SIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKR 228
+ RIG++Y +L N++ A + EK++ PE ++ + + E +R
Sbjct: 248 IAKSFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEE-------ER 300
Query: 229 LEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKA 288
+ ++ E E N ++ A++ + +K+NP+ P L+ C+ A
Sbjct: 301 MAYINPEKAEEEKEQGNLFFKNGDYSTAVKHYTEAIKRNPDD-PKLYSNRAACY--TKLA 357
Query: 289 AAERYLVDALNLPELHDETVFLLANLYFNEEDFEAVINXXXXXXXXXXXAKWLFAGAHKA 348
A + L D +L +E+ + I +K A KA
Sbjct: 358 AFDLGLKDCDTCIKL-------------DEKFIKGYIRKGKILQGMQQQSK-AQAAYQKA 403
Query: 349 LE---NDSEAAALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDE 405
LE N++EA Y + N NP+ + EI QI K +P + LE + D
Sbjct: 404 LELDPNNAEAIEGYRQ-CSMNFQRNPQEVLKNAMSDPEIQQILK-DPAMRMILEQMQSDP 461
Query: 406 N 406
N
Sbjct: 462 N 462
emb|CAA75351| (Y15068) p60 protein [Rattus norvegicus]
Length = 543
Score = 43.8 bits (101), Expect = 0.003
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 115 DFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKL----SERKILHETK 169
DF+ A+ ++A+EL + + A +FE+GDY+ K E + +
Sbjct: 240 DFDKALKHYDKAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQI 299
Query: 170 ISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
Y RIG+SY + +++AI F KSL P+ L K +A K
Sbjct: 300 AKAYARIGNSYFKEERYKDAIHFYNKSLAEHRTPDVLKKC----------QQAEKILKEQ 349
Query: 230 EKMDVEFLNYELAYAQTLEANQ-----EFKAALEMAKKGMKKNPNAVPL 273
E++ ++N +LA + + N+ ++ A++ + +K+NP L
Sbjct: 350 ERL--AYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKL 396
ref|NP_003596.1|| O-linked GlcNAc transferase; beta-N-acetylglucosaminyl transferase;
GlcNAc transferase; uridine
diphospho-N-acetylglucosamine:polypeptide
beta-N-acetylglucosaminyl transferase
>gi|6919938|sp|O15294|OGT1_HUMAN
UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
N-ACETYLGLUCOSAMINYLTRANSFERASE 100 KD SUBUNIT (O-GLCNAC
TRANSFERASE P100 SUBUNIT) >gi|2266994 (U77413) O-linked
GlcNAc transferase [Homo sapiens]
>gi|6911265|gb|AAF31458.1| (AF223393) HRNT1 [Homo
sapiens]
Length = 920
Score = 43.8 bits (101), Expect = 0.003
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 37 DLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVND 96
+LA ++ G + E++ Y+ + P D L NLA I + GN++EA+ +
Sbjct: 172 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 231
Query: 97 ENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITE 155
+ AA +A + Q +G + A+ +EA +S + ++ + + E D A+
Sbjct: 232 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQC 291
Query: 156 YAKLSERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPE 204
Y + + ++ + + + GN AI+ +L+ KP+
Sbjct: 292 YTRAIQ---INPAFADAHSNLASIHKDSGNIPEAIASYRTALKL--KPD 335
dbj|BAA17116| (D90903) hypothetical protein [Synechocystis sp.]
Length = 398
Score = 43.8 bits (101), Expect = 0.003
Identities = 58/299 (19%), Positives = 107/299 (35%), Gaps = 36/299 (12%)
Query: 60 SEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETA 119
++D + L+ + DNGN +A+ Q + D + LY +G F A
Sbjct: 68 TDDRRQFNELLRQGKAYVDNGNFPQAIAIYQQAAMLDGENAELFGSMGYLYARQGQFAEA 127
Query: 120 ISKLEEARELS-DSPLITFALAESYFEQGDYSAAITEYAKL------SERKILHETKISI 172
++A ++ ++P L SY QG + A + YA S + + + I
Sbjct: 128 SRSFQQALRVNPNNPDYYDGLGFSYARQGLLNEAASAYATAISLGPSSRESVKYRLALGI 187
Query: 173 -------YQRI---------------------GDSYAQLGNFENAISFLEKSLE-FDEKP 203
Y R+ G + Q +E I+F ++L F +
Sbjct: 188 IMLQQGDYNRVRQLYNEIHSLQSDNEEAAVMMGAALLQSSEYEQLITFNNQALRLFPNRS 247
Query: 204 ETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKG 263
E ++ Y + A + D + L +A+ LE F AL+ K+
Sbjct: 248 ELTLQLGKAYLAQGDLVAARRALEPRLNPDWRSFSLYLTWAELLEREGNFAGALDAYKQA 307
Query: 264 MKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNEEDFE 322
++ P A+ ++ +L + A A D L + + +LL Y +E +
Sbjct: 308 LRNEPTAIAAKIGTGRMYLELDNPAEAVWVFRDLTRLQPSNADFYYLLGEAYAVDEKID 366
gb|AAB94760.1| (AF039202) Hsp70/Hsp90 organizing protein; hop [Cricetulus griseus]
Length = 543
Score = 43.4 bits (100), Expect = 0.004
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 115 DFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKL----SERKILHETK 169
DF+ A+ + A+EL + + A +FE+GDY+ K E + +
Sbjct: 240 DFDMALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQI 299
Query: 170 ISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
Y RIG+SY + +++AI F KSL P+ L K +A K
Sbjct: 300 AKAYARIGNSYFKEERYKDAIHFYNKSLAEHRTPDVLKKC----------QQAEKILKEQ 349
Query: 230 EKMDVEFLNYELAYAQTLEANQ-----EFKAALEMAKKGMKKNPNAVPL 273
E++ ++N +LA + + N+ ++ A++ + +K+NP L
Sbjct: 350 ERL--AYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKL 396
gi|881485 (U27830) extendin [Mus musculus]
Length = 543
Score = 43.4 bits (100), Expect = 0.004
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 115 DFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKL----SERKILHETK 169
DF+ A+ + A+EL + + A +FE+GDY+ K E + +
Sbjct: 240 DFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQI 299
Query: 170 ISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRL 229
Y RIG+SY + +++AI F KSL P+ L K +A K
Sbjct: 300 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKC----------QQAEKILKEQ 349
Query: 230 EKMDVEFLNYELAYAQTLEANQ-----EFKAALEMAKKGMKKNPNAVPL 273
E++ ++N +LA + + N+ ++ A++ + +K+NP L
Sbjct: 350 ERL--AYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKL 396
pir||A56534 P58 protein - bovine >gi|468012 (U04631) PKR inhibitor P58 [Bos
taurus]
Length = 504
Score = 43.4 bits (100), Expect = 0.004
Identities = 57/265 (21%), Positives = 107/265 (39%), Gaps = 20/265 (7%)
Query: 16 LIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEI 75
L+ +Q A+ N + E +L + + G + ++ + + DP+ A +
Sbjct: 21 LVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATV 80
Query: 76 AEDNGNLDEALNYLYQIPVNDENYIAA-------LIKIADLYQFEGDFETAISKLEEARE 128
G AL L ++ ++ AA L+K L + E DF+ + E
Sbjct: 81 FLAMGKSKAALPDLTKVIELKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENE 140
Query: 129 ---------LSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDS 179
SD + A FE D++AAIT K+ E + + + +
Sbjct: 141 EKEAQSQLVKSDEMQRLRSQALDAFESSDFTAAITFLDKILEVCVWDA---ELRELRAEC 197
Query: 180 YAQLGNFENAISFLEKSLEF-DEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLN 238
+ + G AIS L+ S + ++ E YKI+ LY E + +++ + K+D +
Sbjct: 198 FIKEGEPRKAISDLKASSKLKNDNTEAFYKISTLYYELGDHELSLSEVRECLKLDQDHKR 257
Query: 239 YELAYAQTLEANQEFKAALEMAKKG 263
Y Q + N+ ++A E+ K+G
Sbjct: 258 CFAHYKQVKKLNKLIESAEELIKEG 282
sp|Q04737|Y751_SYNY3 HYPOTHETICAL 27.8 KD PROTEIN SLR0751 >gi|79702|pir||JT0603
hypothetical 27.8K protein (frxC 3' region) -
Synechocystis sp. (PCC 6803) >gi|217095|dbj|BAA01277|
(D10474) ORF248 [Synechocystis sp.]
>gi|1653838|dbj|BAA18748| (D90917) hypothetical protein
[Synechocystis sp.]
Length = 248
Score = 43.0 bits (99), Expect = 0.005
Identities = 33/141 (23%), Positives = 64/141 (44%), Gaps = 4/141 (2%)
Query: 50 ESQKIYDQIMSEDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADL 109
E+ +++ +++ P++ + N E GN+D+A+ + D YI I +L
Sbjct: 79 EAVELFSVVLNLSPDSPETHYNRGLAWERLGNVDQAIADYGRSIALDRYYIPPYINRGNL 138
Query: 110 YQFEGDFETAISKLEEARELSDSPLITFA-LAESYFEQGDYSAAITEYAKLSERKILHET 168
Y + D TAI +A + + A SYF+ G Y+ AI +Y ++ +L
Sbjct: 139 YSQQQDHHTAIQDFTQAITYDPNRYKAYYNRANSYFQLGQYAQAIADYNRV---LVLRPD 195
Query: 169 KISIYQRIGDSYAQLGNFENA 189
I+ G ++ Q G +++
Sbjct: 196 YINAIYNRGLAHFQAGQLDSS 216
emb|CAB41081.1| (AL035453) cB42E1.1 (PUTATIVE novel protein similar to various
different known and predicted proteins) [Homo sapiens]
Length = 263
Score = 42.2 bits (97), Expect = 0.008
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 16/142 (11%)
Query: 70 INLAEIAEDNGNLDEALNYLYQIPVNDE--NYIAALIKIADLYQFEGDFETAISKLEE-- 125
+N+ + E G ++ L L Q+ N+ + A + D Y+ GD+E AI E+
Sbjct: 6 MNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYL 65
Query: 126 -----ARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHE-----TKISIYQR 175
+ D L + G A+ + K + HE K Y
Sbjct: 66 SVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEK--RLVVAHELGEAFNKAQAYGE 123
Query: 176 IGDSYAQLGNFENAISFLEKSL 197
+G ++QLGN+E AIS LE+ L
Sbjct: 124 LGSLHSQLGNYEQAISCLERQL 145
pir||G64502 hypothetical protein MJ1626 - Methanococcus jannaschii >gi|1500524
(U67602) M. jannaschii predicted coding region MJ1626
[Methanococcus jannaschii]
Length = 765
Score = 42.2 bits (97), Expect = 0.008
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 153 ITEYAKLSERKILHETKISIY------QRIGDSYAQLGNFENAISFLEKSLEF-DEKPET 205
+TE A++ ++ +L+ KI IY +IG+ + + ++F+ +F DEK
Sbjct: 561 VTEKAEMEDKDVLNANKIMIYASLNRVDKIGEIINMAEGYYSKLAFINGVKKFIDEKLLD 620
Query: 206 LYKIALLYGETHNETRAIANFKRLEKMDVEFL-NYELAYAQTLEANQ------EFKAALE 258
KI LL + I + K+L M +EF NY + N+ E K ++
Sbjct: 621 EEKINLLIPKI---AEMIYSTKKLRLMALEFFKNYPNELVLPILINEIGNYRGEDKLMID 677
Query: 259 MAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLY--F 316
+ + K PN + H ++ K +A + L + PEL ++ ++LLA +Y
Sbjct: 678 VISNVIFKYPNNI---HSIRELLNTDKRNSALKILLKVSEKRPELLEDFIYLLAGMYSSA 734
Query: 317 NEED 320
NEED
Sbjct: 735 NEED 738
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.315 0.133 0.362
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105563476
Number of Sequences: 457798
Number of extensions: 4251276
Number of successful extensions: 11352
Number of sequences better than 1.0e-02: 52
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 11204
Number of HSP's gapped (non-prelim): 122
length of query: 418
length of database: 140,871,481
effective HSP length: 61
effective length of query: 357
effective length of database: 112,945,803
effective search space: 40321651671
effective search space used: 40321651671
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 97 (42.2 bits)