BLASTP 2.0.11 [Jan-20-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ykaE (1009 kb forward) BIO16.01
         (68 letters)

           457,798 sequences; 140,871,481 total letters

Searching..................................................done

 ***** No hits found ******

    Posted date:  Mar 2, 2000 12:24 PM
  Number of letters in database: 140,871,481
  Number of sequences in database:  457,798
  
Lambda     K      H
   0.322    0.141    0.404 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17196267
Number of Sequences: 457798
Number of extensions: 537784
Number of successful extensions: 1035
Number of sequences better than 1.0e-02: 0
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1035
Number of HSP's gapped (non-prelim): 0
length of query: 68
length of database: 140,871,481
effective HSP length: 47
effective length of query: 21
effective length of database: 119,354,975
effective search space: 2506454475
effective search space used: 2506454475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 86 (37.9 bits)