Score E
Sequences producing significant alignments: (bits) Value
sp|P05332|YP20_BACLI HYPOTHETICAL P20 PROTEIN >gi|80106|pir... 87 8e-17
gi|2618995 (AF027868) putative alanine acetyl transferase [... 76 3e-13
gi|1750115 (U66480) YnaD [Bacillus subtilis] >gi|2634136|em... 68 4e-11
gb|AAD15401.1| (AC006223) putative alanine acetyl transfera... 68 6e-11
gb|AAD15402.1| (AC006223) putative alanine acetyl transfera... 64 9e-10
emb|CAA03913.1| (AJ000084) putative acetyl transferase [Pro... 63 2e-09
emb|CAA15130| (AJ235272) RIBOSOMAL-PROTEIN-ALANINE ACETYLTR... 61 7e-09
emb|CAB75318.1| (AL139164) putative acetyltransferase [Stre... 59 2e-08
gb|AAF11097.1|AE001997_3 (AE001997) acetyltransferase, puta... 57 8e-08
emb|CAB13046| (Z99110) similar to ribosomal-protein-alanine... 54 1e-06
emb|CAB61817.1| (AL133236) putative acetyl transferase [Str... 50 2e-05
gb|AAF11273.1|AE002013_3 (AE002013) conserved hypothetical ... 49 3e-05
gb|AAD36047.1|AE001759_11 (AE001759) conserved hypothetical... 49 3e-05
emb|CAB49323.1| (AJ248284) ACETYL TRANSFERASE [Pyrococcus a... 47 1e-04
sp|P49855|YKKB_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN HMP-PR... 45 5e-04
emb|CAB44535.1| (AL078618) putative acetyltransferase [Stre... 43 0.002
emb|CAB53262.1| (AL109972) putative acetyltransferase [Stre... 43 0.002
sp|P09454|RIMJ_ECOLI RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSF... 41 0.009
sp|P05332|YP20_BACLI HYPOTHETICAL P20 PROTEIN >gi|80106|pir||S00875 hypothetical protein
P20 - Bacillus licheniformis >gi|39573|emb|CAA30415|
(X07542) P20 (AA 1-178) [Bacillus licheniformis]
Length = 178
Score = 87.4 bits (213), Expect = 8e-17
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 14 QTLQTERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKF---FLPNS 70
+TL TERL LRK++LEDA + Y S+PEV ++ + P + R I L
Sbjct: 2 ETLYTERLTLRKMELEDADVLCQYWSDPEVTKYMNITPFTDVSQARDMIQMINDLSLEGQ 61
Query: 71 LYHWGIVEKTSGQLIGEIFLNPINEKT--VELGWILNQDHWGKGIMPEATECLLALSFDK 128
+ I+ K + ++IG N I+++ E+G+ L ++HWGKG EA + L+ F
Sbjct: 62 ANRFSIIVKETDEVIGTCGFNMIDQENGRAEIGYDLGRNHWGKGFASEAVQKLIDYGFTS 121
Query: 129 LEVKVIQAKHFTENAKSGRVMEKLGMKHLGKVYSYFPKFKNPLLTDY-WAITKDEY 183
L + I+AK EN S +++ L + G + Y K K L+ Y +++ K EY
Sbjct: 122 LNLNRIEAKVEPENTPSIKLLNSLSFQKEGLLRDY-EKAKGRLIDVYMFSLLKREY 176
gi|2618995 (AF027868) putative alanine acetyl transferase [Bacillus subtilis]
>gi|2634247|emb|CAB13746| (Z99114) similar to
hypothetical proteins [Bacillus subtilis]
Length = 165
Score = 75.7 bits (183), Expect = 3e-13
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 16 LQTERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRA---TIAKFFLPNSLY 72
L+T+RLILR++ +DA +F SN EV R+ E +S+E + T A +
Sbjct: 5 LETDRLILRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISMIQTFAALYQEKRGI 64
Query: 73 HWGIVEKTSGQLIGEIFLNPINEK--TVELGWILNQDHWGKGIMPEATECLLALSFDKLE 130
WGI + + +LIG I + + +K E+G+ + +HW G E +++ F L
Sbjct: 65 RWGIERRDTKELIGTIGFHALAQKHRRAEIGYEIIPEHWRNGFASEVISKVVSYGFSALG 124
Query: 131 VKVIQAKHFTENAKSGRVMEKLGMKHLGKVYSY 163
+ I A FT+N S R++ K+G + G + Y
Sbjct: 125 LSRIGAVVFTDNEASNRLLLKMGFQKEGVLRQY 157
gi|1750115 (U66480) YnaD [Bacillus subtilis] >gi|2634136|emb|CAB13636|
(Z99113) similar to hypothetical proteins [Bacillus
subtilis]
Length = 170
Score = 68.3 bits (164), Expect = 4e-11
Identities = 48/170 (28%), Positives = 85/170 (49%), Gaps = 3/170 (1%)
Query: 16 LQTERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKFFLPNSLYHWG 75
+ T+RL++R+ + +D ++ Y S+ V ++ E + E +A + K N+ +
Sbjct: 3 ITTKRLLIREFEFKDWQAVYEYTSDSNVMKYIP-EGVFTEEDAKAFVNKNKGDNA-EKFP 60
Query: 76 IVEKTSGQLIGEI-FLNPINEKTVELGWILNQDHWGKGIMPEATECLLALSFDKLEVKVI 134
++ + LIG I F E T E+GW+ N ++ KG EA + +L F ++ + I
Sbjct: 61 VILRDEDCLIGHIVFYKYFGEHTYEIGWVFNPNYQNKGYASEAAQAILEYGFKEMNLHRI 120
Query: 135 QAKHFTENAKSGRVMEKLGMKHLGKVYSYFPKFKNPLLTDYWAITKDEYD 184
A EN S RVM+K+GM+ G PK Y+AI ++E++
Sbjct: 121 IATCQPENIPSYRVMKKIGMRREGFFKKCIPKGNEWWDEYYYAILEEEWN 170
gb|AAD15401.1| (AC006223) putative alanine acetyl transferase [Arabidopsis
thaliana]
Length = 188
Score = 67.9 bits (163), Expect = 6e-11
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 19 ERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKFFLPNSLYHWGIVE 78
E++ LR + L D + +A++ V RF ++EP+ S E A + LP+ ++
Sbjct: 23 EKIHLRPMTLSDVDDFMVWATDSNVTRFCTWEPYTSREAAIAYLNDALLPHPWLRAICLD 82
Query: 79 KTSGQLIGEIFLNPINEKTVELGWILNQDHWGKGIMPEATECLLALSF-DKLEVKVIQAK 137
+ + IG I + P++E E+G++L +WGKGI EA + F +K E++ ++A
Sbjct: 83 --NDRPIGSISVTPVDEIRGEIGYVLGSKYWGKGIATEAVRLVAGEIFKEKPEMQRLEAL 140
Query: 138 HFTENAKSGRVMEKLG 153
+N S +V+EK+G
Sbjct: 141 VDVDNVGSQKVLEKVG 156
gb|AAD15402.1| (AC006223) putative alanine acetyl transferase [Arabidopsis
thaliana]
Length = 183
Score = 64.0 bits (153), Expect = 9e-10
Identities = 43/142 (30%), Positives = 74/142 (51%), Gaps = 7/142 (4%)
Query: 20 RLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKFFLPNSLYH-W-GIV 77
R+ LR + L D + +A++P+VARF ++EP T+R K+ L H W +
Sbjct: 19 RISLRPMTLSDVDDYMVWATDPKVARFCTWEPC----TSRDEAIKYITDRVLTHPWLRAI 74
Query: 78 EKTSGQLIGEIFLNPINEKTVELGWILNQDHWGKGIMPEATECLLALSFDKL-EVKVIQA 136
+ IG I + ++ E+G++L + +WGKG EA + A F++ E++ ++A
Sbjct: 75 CLEDDRPIGYILIMAVDNIRKEIGYVLARKYWGKGFATEAVRLVTAEVFEEFPEIERLEA 134
Query: 137 KHFTENAKSGRVMEKLGMKHLG 158
+N S RV+EK+G G
Sbjct: 135 LVDVDNVGSQRVLEKVGFTREG 156
emb|CAA03913.1| (AJ000084) putative acetyl transferase [Proteus mirabilis]
Length = 185
Score = 62.8 bits (150), Expect = 2e-09
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 16 LQTERLILRKLQLED-APEMFNYASNPEVARF-----TSFEPHDSLETTRATIAKFFLPN 69
L T RL LR+ + D AP + ++ V R+ T E ++T R KF N
Sbjct: 3 LATPRLRLREWRESDKAPFFLHINASASVMRYFPSPLTRAESDAMVDTLRD---KFIQQN 59
Query: 70 SLYHWGIVEKTSGQLIGEIFLNPIN-----EKTVELGWILNQDHWGKGIMPEATECLLAL 124
W + K + +LIG + LN N VE+GW + Q HW KG EA +L
Sbjct: 60 GWGFWAVELKETQELIGFVGLNIPNAPLPFNPCVEIGWRIAQSHWRKGYTYEAALTVLKY 119
Query: 125 SFDKLEVKVIQAKHFTENAKSGRVMEKLGMK 155
+F++L+++ + A N S VM+KLGMK
Sbjct: 120 AFEQLKLEEVVAFTAVTNLPSEGVMKKLGMK 150
emb|CAA15130| (AJ235272) RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE (rimJ)
[Rickettsia prowazekii]
Length = 183
Score = 60.9 bits (145), Expect = 7e-09
Identities = 46/168 (27%), Positives = 79/168 (46%), Gaps = 9/168 (5%)
Query: 3 MVNINLVLAEHQTLQTERLILRKLQLEDAPEMFNYASNPEVARFT--SFEPHDSLETTRA 60
M+NI + ++LR+L D + Y S E+ + S P D LE R
Sbjct: 1 MINIGYLHTTFPVFDLGNIVLRELAESDVQDYLCYMSRSEMGLYITESNRPKD-LEEARK 59
Query: 61 TI---AKFFLPNSLYHWGIVEKTSGQLIGEIFLNPIN--EKTVELGWILNQDHWGKGIMP 115
I + + + ++WGI KT +LIG N IN E+ + L+ + WG+GIM
Sbjct: 60 EIFYWSNLYTLHRSFYWGIALKTDNKLIGTAGFNIINLEHHRAEISYDLDPNFWGQGIML 119
Query: 116 EATECLLALSFDKLEVKVIQAKHFTENAKSGRVMEKLGMKHLGKVYSY 163
++ + +L + D + + +QA T+N +S ++E+ G G + Y
Sbjct: 120 KSIKNILKFA-DCIGIIRVQATVITDNFRSVNLLERCGFSKEGILKKY 166
emb|CAB75318.1| (AL139164) putative acetyltransferase [Streptomyces coelicolor
A3(2)]
Length = 202
Score = 59.3 bits (141), Expect = 2e-08
Identities = 39/147 (26%), Positives = 74/147 (49%), Gaps = 5/147 (3%)
Query: 11 AEHQTLQTERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHD--SLETTRATIAKFFLP 68
+E L +R +LR EDA M+ ++PEV RFT FEP +L+ R+
Sbjct: 7 SEKPVLTGDRTVLRPFTAEDADTMWEIVNDPEVVRFT-FEPSTELTLDGLRSWYGVRTAD 65
Query: 69 NSLYHWGIVEKTSGQLIGEIFLNPINE--KTVELGWILNQDHWGKGIMPEATECLLALSF 126
+ ++ +G+L+GE+ L + + ++ G+G+ EAT ++ +F
Sbjct: 66 PDRLDLAVTDRATGELVGEVVLYEWDPAARGCTFRTLVGPRGRGRGLCSEATRLIVGHAF 125
Query: 127 DKLEVKVIQAKHFTENAKSGRVMEKLG 153
+++ + +Q + + +NA++ RV EK G
Sbjct: 126 ERVGLHRVQLEVYADNARARRVYEKAG 152
gb|AAF11097.1|AE001997_3 (AE001997) acetyltransferase, putative [Deinococcus radiodurans]
Length = 182
Score = 57.4 bits (136), Expect = 8e-08
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 18 TERLILRKLQLEDAPEMFNYASNPEVARFTSFEPH---DSLETTRATIAKFFLPNSLYHW 74
T RL LR + D + Y P V R+ EP D+ E + + L
Sbjct: 11 TPRLKLRLYESRDLDALLGYYRQPAVTRYLLEEPWTRADAEEQGQKREQRRGLDTPAGAL 70
Query: 75 GIVEKTSGQLIGE--IFLNPINEKTVELGWILNQDHWGKGIMPEATECLLALSFDKLEVK 132
+V G++IG+ ++L+ + E+GW+++ + G+G+ EA LL L+FD +
Sbjct: 71 ALVWDYGGRVIGDAALWLSDETRQVAEIGWVMDPAYAGQGLATEAVAPLLTLAFDSYGLH 130
Query: 133 VIQAKHFTENAKSGRVMEKLGMK 155
+ A+ N S R+ E+LG++
Sbjct: 131 RVTAQMDARNVASARLCERLGLR 153
emb|CAB13046| (Z99110) similar to ribosomal-protein-alanine N-acetyltransferase
[Bacillus subtilis]
Length = 181
Score = 53.9 bits (127), Expect = 1e-06
Identities = 44/153 (28%), Positives = 74/153 (47%), Gaps = 10/153 (6%)
Query: 16 LQTERLILRKLQLEDAPEMFNYASNPE--VARFTSFEPHD--SLETTRATIAKF---FLP 68
L+ + + +R L++ DA E S +F+ D ++E R I ++
Sbjct: 2 LKGKTIYVRPLEVTDAEENLGLQSENRDFFEQFSMIRADDYYTVEGQRKRITEYQERLEK 61
Query: 69 NSLYHWGIVEKTSGQLIGEIFLNPINE---KTVELGWILNQDHWGKGIMPEATECLLALS 125
+ YH+GI + +LIG + L I +T +G+ L++ H GKGIM EA ++ +
Sbjct: 62 DEEYHFGIFTASDDRLIGTVSLFQIIRGALQTAFIGYFLDKAHNGKGIMTEAVRLVVDYA 121
Query: 126 FDKLEVKVIQAKHFTENAKSGRVMEKLGMKHLG 158
F +L++ I+A N S RV+EK G G
Sbjct: 122 FHELKLHRIEAGVMPRNLGSMRVLEKAGFHKEG 154
emb|CAB61817.1| (AL133236) putative acetyl transferase [Streptomyces coelicolor
A3(2)]
Length = 195
Score = 49.6 bits (116), Expect = 2e-05
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 23 LRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLET-----TRATIAKFFLPNSLYHWGIV 77
L ++ D + ++A P+ RF + P+ +T A P L H V
Sbjct: 8 LHRIVFTDWLAVHSWAGLPDACRFQPWGPNTEEQTRDFVRAAAEAWTHIRPRRLAH---V 64
Query: 78 EKTSGQLIG--EIFLNPINEKTVELGWILNQDHWGKGIMPEATECLLALSFDKLEVKVIQ 135
+ ++G ++ + ++ E+ +I++ WG+GI E LL+L FD+ + I+
Sbjct: 65 ARVGNAVVGMGDLHVRSHTQRQGEISYIVHPRVWGQGIGTEIGRSLLSLGFDRWGLHRIR 124
Query: 136 AKHFTENAKSGRVMEKLGMKHLGK 159
A N S RV+ KLGM + G+
Sbjct: 125 ATCDPRNQASSRVLTKLGMTYEGR 148
gb|AAF11273.1|AE002013_3 (AE002013) conserved hypothetical protein [Deinococcus radiodurans]
Length = 184
Score = 48.8 bits (114), Expect = 3e-05
Identities = 27/83 (32%), Positives = 45/83 (53%), Gaps = 1/83 (1%)
Query: 78 EKTSGQLIGEIFLNPINEKTVELGWILNQDH-WGKGIMPEATECLLALSFDKLEVKVIQA 136
E G+L+G + L I + E G + + H WG+G A + LLA +F L + V++A
Sbjct: 72 EGQGGELVGYVDLGDITAGSAEFGIAIGEPHRWGQGTGTRAGQLLLAHAFGPLGLSVLRA 131
Query: 137 KHFTENAKSGRVMEKLGMKHLGK 159
K N +S +M++LG +G+
Sbjct: 132 KVHAPNVRSHALMQRLGFIPVGE 154
gb|AAD36047.1|AE001759_11 (AE001759) conserved hypothetical protein [Thermotoga maritima]
Length = 182
Score = 48.8 bits (114), Expect = 3e-05
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 23 LRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKFF-----LPNSLYHWGIV 77
LR + ED + +A++PEV + P + K++ Y + I
Sbjct: 9 LRAYRKEDIEKALEFANDPEVKK--CLVPGIPFPWRKEDEEKWYQSLNPFSTDSYSFAIE 66
Query: 78 EKTSGQLIGEIFLNPINEKT--VELGWILNQDHWGKGIMPEATECLLALSFDKLEVKVIQ 135
+ + G+ IG +N I+ K E+G L + +W +G +A L+ F+++ + I+
Sbjct: 67 KLSDGEYIGGCSINKIDWKNSVAEVGIFLGRPYWSQGYGTDAMRVLVRFIFNEMNMNKIK 126
Query: 136 AKHFTENAKSGRVMEKLGMK 155
F+ N ++ RV EK+G K
Sbjct: 127 LHVFSFNERAKRVYEKIGFK 146
emb|CAB49323.1| (AJ248284) ACETYL TRANSFERASE [Pyrococcus abyssi]
Length = 141
Score = 46.9 bits (109), Expect = 1e-04
Identities = 25/101 (24%), Positives = 51/101 (49%), Gaps = 4/101 (3%)
Query: 71 LYHWGIVEKTSGQLIGEIFLNPIN--EKTVELGWILNQDHWGKGIMPEATECLLALSFDK 128
+ ++ +VE +L+G + I+ + + +++ ++HWGKG E L +F+
Sbjct: 28 MINFAVVENEKEELVGFCGIGDIDWRSRNAMVWYLIGKEHWGKGYGTETLALLCRFAFEN 87
Query: 129 LEVKVIQAKHFTENAKSGRVMEKLGMKHLG--KVYSYFPKF 167
+ ++ + + N S RV+EK G K +G K + Y P +
Sbjct: 88 MNLRKLYTHVYEPNRASIRVLEKNGFKLVGRLKKHVYLPDY 128
sp|P49855|YKKB_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN HMP-PROB INTERGENIC REGION
>gi|1063250|dbj|BAA11261| (D78189) low homology to P20
protein of Bacillus lichiniformis and bleomycin
acetyltransferase of Streptomyces verticillus [Bacillus
subtilis] >gi|2632028|emb|CAA05587| (AJ002571) YkkB
[Bacillus subtilis] >gi|2633662|emb|CAB13165| (Z99110)
similar to N-acetyltransferase [Bacillus subtilis]
Length = 172
Score = 44.9 bits (104), Expect = 5e-04
Identities = 25/86 (29%), Positives = 43/86 (49%), Gaps = 3/86 (3%)
Query: 74 WGIVEKTSGQLIGEIFLNPI---NEKTVELGWILNQDHWGKGIMPEATECLLALSFDKLE 130
W +K +G+ +G+ + P N+ +E+G++ + HWG G EA L F++ +
Sbjct: 67 WIAEDKRTGEFLGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNERQ 126
Query: 131 VKVIQAKHFTENAKSGRVMEKLGMKH 156
+ A N S RV EK+GM +
Sbjct: 127 FGKMAALIDPGNKASIRVAEKIGMHY 152
emb|CAB44535.1| (AL078618) putative acetyltransferase [Streptomyces coelicolor]
Length = 187
Score = 43.0 bits (99), Expect = 0.002
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 74 WGIVEKTSGQLIGEIFLNPIN-----EKTVELGWILNQDHWGKGIMPEATECLLALSFDK 128
W +V++ SGQ+IG P E +E+GW L + HWGKG + A L D
Sbjct: 63 WTMVDE-SGQVIGFTGAQPWPGDWGPEGEIEIGWRLGRAHWGKGYVTAAARQTLERVRDA 121
Query: 129 LEVKVIQAKHFTENAKSGRVMEKLGMKHLGKVYS 162
+V+ A NA+S V E+LGM+ L +V++
Sbjct: 122 GVAEVV-AMVNARNARSIAVTERLGMR-LAEVFT 153
emb|CAB53262.1| (AL109972) putative acetyltransferase [Streptomyces coelicolor
A3(2)]
Length = 177
Score = 42.6 bits (98), Expect = 0.002
Identities = 41/148 (27%), Positives = 64/148 (42%), Gaps = 10/148 (6%)
Query: 16 LQTERLILRKLQLEDAPEMFNYASNPEVARFTSFEPHDSLETTRATIAKF---FLPNSLY 72
++T RL+LR +D M + ++P V R+T L+ T I ++ +
Sbjct: 4 IRTPRLLLRSWHDDDLTPMADINADPRVMRWTDDGSVRDLDHTAEDIERWEEEWDEEGFG 63
Query: 73 HWGIVEKTSGQLIGEIFLN-----PINEKTVELGWILNQDHWGKGIMPEATECLLALSF- 126
+ + SG+LIG L+ P V + W L WG+G EA L +
Sbjct: 64 LFAVELLASGELIGFTGLSVPEFLPEVMPAVAISWRLGSPFWGQGYASEAAHATLEFALQ 123
Query: 127 DKLEVKVIQAKHFTENAKSGRVMEKLGM 154
D+ +VI +NA S V+ KLGM
Sbjct: 124 DRGLDRVISISRMGDNA-SENVIRKLGM 150
sp|P09454|RIMJ_ECOLI RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE (ACETYLATING ENZYME FOR
N-TERMINAL OF RIBOSOMAL PROTEIN S5)
>gi|78757|pir||S01084 peptide N-acetyltransferase rimJ
(EC 2.3.1.-) - Escherichia coli >gi|42744|emb|CAA29490|
(X06118) S5 (AA 1-194) [Escherichia coli] >gi|147655
(M99278) acetylase [Escherichia coli]
>gi|1651524|dbj|BAA35874| (D90743)
Ribosomal-protein-alanine acetyltransferase (EC
2.3.1.128) (acetylating enzyme for N-terminal of
ribosomal protein S5). [Escherichia coli] >gi|1787305
(AE000207) acetylation of N-terminal alanine of 30S
ribosomal subunit protein S5 [Escherichia coli]
Length = 194
Score = 40.6 bits (93), Expect = 0.009
Identities = 37/158 (23%), Positives = 65/158 (40%), Gaps = 10/158 (6%)
Query: 16 LQTERLILRKLQLEDAPEMFNYASNP-------EVARFTSFEPHDSLETTRATIAKFFLP 68
L T+RL++R + DA + +Y + E R S + I +F
Sbjct: 13 LTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQ 72
Query: 69 NSLYHWGIVEKTSGQLIGEI-FLNPINEK--TVELGWILNQDHWGKGIMPEATECLLALS 125
S +++G+ + ++IG F N + LG+ + Q GKG+M EA +
Sbjct: 73 GSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYM 132
Query: 126 FDKLEVKVIQAKHFTENAKSGRVMEKLGMKHLGKVYSY 163
+ I A + N +SG ++ +LG + G Y
Sbjct: 133 QRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDY 170
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.137 0.411
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51886440
Number of Sequences: 457798
Number of extensions: 2066002
Number of successful extensions: 6443
Number of sequences better than 1.0e-02: 18
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6420
Number of HSP's gapped (non-prelim): 18
length of query: 187
length of database: 140,871,481
effective HSP length: 52
effective length of query: 135
effective length of database: 117,065,985
effective search space: 15803907975
effective search space used: 15803907975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 93 (40.6 bits)