Score E
Sequences producing significant alignments: (bits) Value
gb|AAF03497.1|AC010676_7 (AC010676) unknown protein [Arabid... 219 2e-56
gb|AAF07389.1|AC010675_12 (AC010675) unknown protein [Arabi... 216 2e-55
emb|CAA10289| (AJ131049) hypothetical protein [Cicer arieti... 206 2e-52
emb|CAB64583.1| (AL135941) hypothetical protein L391.06 [Le... 169 2e-41
emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Le... 165 5e-40
sp|P16148|PZ12_LUPPO PPLZ12 PROTEIN >gi|81843|pir||S14688 h... 118 7e-26
emb|CAB11132.1| (Z98551) predicted using hexExon; MAL3P6.19... 90 3e-17
gb|AAD35948.1|AE001753_4 (AE001753) conserved hypothetical ... 83 3e-15
emb|CAB45288.1| (AL079332) conserved hypothetical protein [... 80 2e-14
emb|CAB38270| (AL035602) putative protein [Arabidopsis thal... 76 2e-13
gb|AAF11687.1|AE002048_7 (AE002048) conserved hypothetical ... 75 6e-13
emb|CAB50468.1| (AJ248288) STOMATIN-LIKE PROTEIN [Pyrococcu... 75 6e-13
sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|262177... 75 7e-13
emb|CAA14788| (AJ235271) unknown [Rickettsia prowazekii] 75 1e-12
dbj|BAA29558| (AP000002) 298aa long hypothetical membrane p... 75 1e-12
sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KD PROTEIN RV1488 >g... 71 8e-12
emb|CAA19027.1| (AL023554) conserved hypothetical protein. ... 71 1e-11
gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridi... 69 3e-11
sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-T... 69 6e-11
emb|CAB03018.1| (Z81072) predicted using Genefinder; Simila... 68 7e-11
sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >... 68 7e-11
gb|AAF09142.1|AF190167_1 (AF190167) membrane associated pro... 66 4e-10
gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens] 65 6e-10
emb|CAA14591| (AJ235270) HFLK PROTEIN (hflK) [Rickettsia pr... 62 4e-09
sp|O28852|YE20_ARCFU HYPOTHETICAL PROTEIN AF1420 >gi|264915... 61 1e-08
emb|CAB49571.1| (AJ248285) STOMATIN-LIKE PROTEIN [Pyrococcu... 61 2e-08
gi|2984585 (AC004472) P1.11659_4 [Homo sapiens] 60 3e-08
sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|325793... 59 4e-08
gi|2183273 (AF002133) MAV266 [Mycobacterium avium] 58 1e-07
sp|P40605|HFLK_VIBPA HFLK PROTEIN >gi|507734 (U09005) HflK ... 58 1e-07
sp|P25662|HFLK_ECOLI HFLK PROTEIN >gi|280067|pir||B43653 pr... 56 4e-07
gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major] 55 7e-07
gb|AAD36886.1|AE001819_9 (AE001819) ftsH protease activity ... 55 7e-07
dbj|BAA17070| (D90903) hypothetical protein [Synechocystis ... 54 1e-06
sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|212910... 54 2e-06
ref|NP_031557.1|| B-cell receptor-associated protein 37 >gi... 53 2e-06
dbj|BAA81164.1| (AP000063) 278aa long hypothetical erythroc... 52 5e-06
gi|2983432 (AE000713) erythrocyte band 7 homolog [Aquifex a... 52 5e-06
sp|O32076|YUAG_BACSU HYPOTHETICAL 56.0 KD PROTEIN IN GLGB-G... 52 8e-06
gb|AAD36885.1|AE001819_8 (AE001819) ftsH protease activity ... 49 4e-05
emb|CAA21750.1| (AL032659) predicted using Genefinder; simi... 48 1e-04
gi|2622911 (AE000933) stomatin-like protein [Methanobacteri... 47 2e-04
sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|p... 47 2e-04
emb|CAA18987| (AL023517) hypothetical protein SC1B5.13c [St... 45 0.001
gi|2231128 (L36867) growth-associated protein [Carassius au... 44 0.002
gi|3115387 (AF044916) flotillin-2 [Drosophila melanogaster] 43 0.002
emb|CAA16891.1| (AL021749) prohibitin-like protein [Arabido... 42 0.005
ref|NP_032857.1|| prohibitin >gi|130020|sp|P24142|PHB_MOUSE... 42 0.005
ref|NP_002625.1|| prohibitin >gi|464371|sp|P35232|PHB_HUMAN... 42 0.007
gb|AAF03497.1|AC010676_7 (AC010676) unknown protein [Arabidopsis thaliana]
>gi|6714460|gb|AAF26146.1|AC008261_3 (AC008261) unknown
protein [Arabidopsis thaliana]
Length = 285
Score = 219 bits (552), Expect = 2e-56
Identities = 120/271 (44%), Positives = 166/271 (60%), Gaps = 3/271 (1%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGI-DRIAARVQLRLLQTEMTVETKTADNVF 84
+VKQ VA+ ERFGK+Q NPG +PW I D +A + LRL Q ++ ETKT DNVF
Sbjct: 9 LVKQSDVAVKERFGKFQKVLNPGLQF-VPWVIGDYVAGTLTLRLQQLDVQCETKTKDNVF 67
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
VT+ + QYRV DA+Y+L NP QIKAY+ D +R+ VPKL LDDVFE+K+EIA
Sbjct: 68 VTVVASIQYRVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQKNEIAKS 127
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
V++ + + M YGY I++TLI +EPD +VK++MNEINAA R + A+ A A KI +
Sbjct: 128 VEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEAEKIIQIK 187
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLN 264
AE EAE L G+GIA QR+AIVDGL + + ++ +++ QY DT+
Sbjct: 188 RAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAGNVPGTSAKDVLDMVMMTQYFDTMR 247
Query: 265 QF-AAGGNSTIFLPSGAEGAESLRTQILSAI 294
A +S +F+P G + QI + +
Sbjct: 248 DIGATSKSSAVFIPHGPGAVSDVAAQIRNGL 278
gb|AAF07389.1|AC010675_12 (AC010675) unknown protein [Arabidopsis thaliana]
Length = 286
Score = 216 bits (544), Expect = 2e-55
Identities = 117/273 (42%), Positives = 164/273 (59%), Gaps = 3/273 (1%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGI-DRIAARVQLRLLQTEMTVETKTADNVFV 85
V Q VAI E FGK+ PG H LPW + ++A + LR+ Q ++ ETKT DNVFV
Sbjct: 10 VDQSNVAIKETFGKFDEVLEPGCHC-LPWCLGSQVAGHLSLRVQQLDVRCETKTKDNVFV 68
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
T+ + QYR +S +DA+YKL N QI+AY+ D +R++VPKL LD FE+K++IA V
Sbjct: 69 TVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQKNDIAKTV 128
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTA 205
+ + + M YGY IV+TLI +EPD VK++MNEINAA R ++A+ A A KI +
Sbjct: 129 ETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEAEKILQIKR 188
Query: 206 AEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQ 265
AE EAE L G+GIA QR+AIVDGL + + + +M ++L QY DTL +
Sbjct: 189 AEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQYFDTLKE 248
Query: 266 FAAGGNS-TIFLPSGAEGAESLRTQILSAIKAG 297
A S ++F+P G + +QI + G
Sbjct: 249 IGASSKSNSVFIPHGPGAVRDIASQIRDGLLQG 281
emb|CAA10289| (AJ131049) hypothetical protein [Cicer arietinum]
Length = 286
Score = 206 bits (518), Expect = 2e-52
Identities = 115/273 (42%), Positives = 162/273 (59%), Gaps = 3/273 (1%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGID-RIAARVQLRLLQTEMTVETKTADNVFV 85
V Q VAI E+FG++ PG H LPW + +IA + LR+ Q ++ ETKT DNVFV
Sbjct: 10 VDQSNVAIKEQFGRFVDVLEPGCHC-LPWCLGYQIAGGLSLRVQQLDVKCETKTKDNVFV 68
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
+ + QYR DA+Y+L N EQI++Y+ D +R++VPKL LD VFE+K++IA V
Sbjct: 69 MVVASVQYRAVADKASDAFYRLTNTREQIQSYVFDVIRASVPKLELDAVFEQKNDIAKAV 128
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTA 205
+ + + M YGY IV+TLI VEPD VK++MNEINAA R + A+ A A KI +
Sbjct: 129 EDELEKAMSNYGYEIVQTLIVDVEPDVNVKRAMNEINAAARLRLAANDKAEAEKILQIKK 188
Query: 206 AEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQ 265
AE EAE L G+GIA QR+AIVDGL + + + +M ++L QY DT+ +
Sbjct: 189 AEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVTQYFDTMKE 248
Query: 266 FAAGG-NSTIFLPSGAEGAESLRTQILSAIKAG 297
A +S++F+P G + QI + G
Sbjct: 249 IGASSKSSSVFIPHGPGAVRDIAVQIRDGLLQG 281
emb|CAB64583.1| (AL135941) hypothetical protein L391.06 [Leishmania major]
Length = 277
Score = 169 bits (425), Expect = 2e-41
Identities = 94/268 (35%), Positives = 152/268 (56%), Gaps = 2/268 (0%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVT 86
+ Q V IVE G++ +TA+PG H W + RV LRL + E+ VE+KT DNVFVT
Sbjct: 7 ISQSEVGIVETCGRFSYTADPGIHCL--WCGSVLVRRVTLRLQEYELKVESKTKDNVFVT 64
Query: 87 MNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQ 146
+++ QY+V+ + + YY + + ++ Y+ +++R+ +P L+ ++ ++ I+ +++
Sbjct: 65 LSLVIQYQVSPDKLAEVYYACDSSLQCMRDYVLNSIRAKIPLYKLEALYVERGTISQQLK 124
Query: 147 KTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAA 206
V + TYG IV LI+ ++P AE+ ++MNE+ QR + AS A K++ V AA
Sbjct: 125 DEVDAIIGTYGIEIVSALISDIDPGAEITKAMNEVQKFQRLRVASVDAAETEKLKRVRAA 184
Query: 207 EAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQF 266
EA E RL G G+AEQRKAIV GL I +++ L +LL NQY DTL
Sbjct: 185 EARCEARRLSGEGLAEQRKAIVAGLMHSIEDVQSEVRDLTSNDATNMLLMNQYYDTLQAI 244
Query: 267 AAGGNSTIFLPSGAEGAESLRTQILSAI 294
AA +S++ + G E + Q+ +
Sbjct: 245 AANSSSSVIMLESNGGLEKVAAQLRQGV 272
emb|CAB64584.1| (AL135941) hypothetical protein L391.07 [Leishmania major]
Length = 283
Score = 165 bits (413), Expect = 5e-40
Identities = 88/268 (32%), Positives = 150/268 (55%), Gaps = 2/268 (0%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVT 86
V V I+E GK+ TA+PG +P ++ + V L++ + + VETKT DN V
Sbjct: 9 VSTSEVGIIENCGKFDRTADPGCFCIVPC-VESVRGVVSLKVAISTVRVETKTRDNAVVN 67
Query: 87 MNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQ 146
+ Y+V + +DA+Y+ NP EQI ++ +R VPK TLD++F DEI V
Sbjct: 68 IETRLHYKVIAECAEDAFYRFSNPSEQIASFAASVVRGEVPKYTLDELFLMSDEIKKVVS 127
Query: 147 KTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAA 206
+ E+++ +G+ + TL+T++EP A VK ++++ ++ A++ + NKI V AA
Sbjct: 128 AELTEKLRGFGFSLESTLLTRIEPSASVKTAISQTQINAYRRTAAEHESELNKILAVKAA 187
Query: 207 EAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQF 266
EA+ E+ RL GVG+A++R+AI+ GL I ++ + +M +LL NQY D + +
Sbjct: 188 EADYEEKRLSGVGLAQERQAIMKGLKSSIESFVNAVPSMRAKDVMNLLLLNQYFDAMKEV 247
Query: 267 AAG-GNSTIFLPSGAEGAESLRTQILSA 293
+G N I +P+ A + +++A
Sbjct: 248 GSGKSNKLILMPNTCGAAPNFMADLVAA 275
sp|P16148|PZ12_LUPPO PPLZ12 PROTEIN >gi|81843|pir||S14688 hypothetical protein pPLZ12 -
large-leaved lupine >gi|19501|emb|CAA36070| (X51768)
pPLZ12 gene product (AA 1-184) [Lupinus polyphyllus]
Length = 184
Score = 118 bits (292), Expect = 7e-26
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 129 LTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQ 188
+ LDD+FE+K E+A V + + + M YGY I L+ + PD V+++MNEINAAQR Q
Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQ 60
Query: 189 DASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEE 248
AS A KI V AEAEAE L GVG+A QR+AI DGL + I +
Sbjct: 61 LASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAK 120
Query: 249 QIMAILLTNQYLDTLNQFA-AGGNSTIFLPSG----AEGAESLRTQILSAIKAG 297
++M +++ QY DT+ + N+T+F+P G + E +R ++ + +AG
Sbjct: 121 EVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESARAG 174
emb|CAB11132.1| (Z98551) predicted using hexExon; MAL3P6.19 (PFC0800w), Band
7-related protein, len: 375 aa; Similarity to S.pombe
hypothetical protein SPBC16G5.07C. S.pombe hypothetical
protein SPBC16G5.07C (TR:O60121) BLAST Score: 700,
sum...
Length = 374
Score = 89.7 bits (219), Expect = 3e-17
Identities = 70/270 (25%), Positives = 127/270 (46%), Gaps = 9/270 (3%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTA---DN 82
++ Q+T IVER GKY T G H +P+ ID+IA L+ + +T+ +TA DN
Sbjct: 81 IIPQETAYIVERLGKYNKTLLAGIHFLIPF-IDKIAYVFSLK--EETITIPNQTAITKDN 137
Query: 83 VFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIA 142
V T+NI + + ++ Y + + + + +RS + KLTLD F ++D +
Sbjct: 138 V--TLNIDGVLYIKCDNPYNSSYAIEDAVFAVTQLAQVTMRSELGKLTLDATFLERDNLN 195
Query: 143 LEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQV 202
++ K + E + +G ++ I + +K +M + A+R++ A + + +
Sbjct: 196 EKLVKAINESAKNWGIKCMRYEIRDIILPVNIKNAMEKQAEAERRKRAEILQSEGERESE 255
Query: 203 VTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDT 262
+ A + K L G + KA D A+ I I LD +++L+ QY+D
Sbjct: 256 INIAIGKKRKSILIAEGQSFAIKAKADATAEAIEIISNKIKKLDSNNAISLLVAEQYIDV 315
Query: 263 LNQFAAGGNSTIFLPSGAEGAESLRTQILS 292
+ N+T+ +P+ SL +Q LS
Sbjct: 316 FSNICK-NNNTVIIPADLNNISSLISQSLS 344
gb|AAD35948.1|AE001753_4 (AE001753) conserved hypothetical protein [Thermotoga maritima]
Length = 305
Score = 83.1 bits (202), Expect = 3e-15
Identities = 70/264 (26%), Positives = 122/264 (45%), Gaps = 19/264 (7%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFV 85
+V+ +VER GK++ G H +P+ I ++ +++ E T DNV V
Sbjct: 22 IVRPYERGLVERLGKFKREVGAGVHFIIPFFERMIKVDMREKVIDVPPQ-EVITRDNVVV 80
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDA---LRSAVPKLTLDDVFEKKDEIA 142
T++ Y + DAY + N A I+ A LR+ + +L LD ++ I
Sbjct: 81 TVDAVIYYEIT-----DAYRVVYNVSNFEMATIKLAQTNLRNVIGELELDQTLTSRERIN 135
Query: 143 LEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQV 202
++++ + E +G I + I K++P ++ +M++ A+R + A+ + A K
Sbjct: 136 MKLRTVLDEATDKWGVRITRVEIKKIDPPQDITDAMSKQMKAERTKRAAILEAEGYKQAE 195
Query: 203 VTAAE---------AEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAI 253
+ AE AE E + + V A +K I++ Q IK + A+ E
Sbjct: 196 ILKAEGQKNAAILRAEGEAEAIKRVAEANMQKLILEARG-QAEAIKLVFNAIHEGNPTKD 254
Query: 254 LLTNQYLDTLNQFAAGGNSTIFLP 277
LLT +YL+TL + A G + IFLP
Sbjct: 255 LLTVRYLETLKEMANGQATKIFLP 278
emb|CAB45288.1| (AL079332) conserved hypothetical protein [Streptomyces coelicolor]
Length = 319
Score = 80.4 bits (195), Expect = 2e-14
Identities = 64/252 (25%), Positives = 119/252 (46%), Gaps = 7/252 (2%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
V+ Q + AIVERFG+Y T N G ++ +P+ ID I R+ LR + T DN+
Sbjct: 25 VIPQASAAIVERFGRYTRTLNAGLNIVVPF-IDTIRNRIDLREQVVPFPPQPVITQDNLV 83
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
V ++ Y+V + + A Y++ + + I+ LR+ + + L+ ++EI
Sbjct: 84 VNIDTVIYYQVTDA--RAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAA 141
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
++ + E +G + + + +EP ++ SM + A R + A+ + A + +
Sbjct: 142 LRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDKRAAILQAEGVRQSEIL 201
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLN 264
AE E + L G A+ +G AQ + + + A D +Q LL+ QYL L
Sbjct: 202 RAEGEKQSQILRAEGEAKAAALRAEGEAQAVRTVFEAIHAGDPDQ---KLLSYQYLQMLP 258
Query: 265 QFAAGGNSTIFL 276
+ A G + +++
Sbjct: 259 KIAEGDANKLWI 270
emb|CAB38270| (AL035602) putative protein [Arabidopsis thaliana]
Length = 515
Score = 76.5 bits (185), Expect = 2e-13
Identities = 69/288 (23%), Positives = 133/288 (45%), Gaps = 26/288 (9%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
+V ++ ++ERFGKY T G H +P+ +DRIA L+ + +T T DNV
Sbjct: 65 IVPERKAFVIERFGKYATTLPSGIHFLIPF-VDRIAYVHSLKEEAIPIPNQTAITKDNVS 123
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
+ ++ ++ + + A Y + +P + + +RS + K+TLD FE++D + +
Sbjct: 124 IHIDGVLYVKIVDPKL--ASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEERDTLNEK 181
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQM----------- 193
+ + + + +G ++ I + P V+ +M A+RK+ A +
Sbjct: 182 IVEAINVAAKDWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILESEGERQSHIN 241
Query: 194 LANANKIQVVTAAEAEAEKDRLH-----GVGIAEQRKAIVDGLAQQITEIKKLGVALDEE 248
+A+ K V+ A+EA A+ D+++ I + +A GL +K+ G
Sbjct: 242 IADGKKSSVILASEA-AKMDQVNRAQGEAEAILARAQATAKGLVLLSQSLKETGGV---- 296
Query: 249 QIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKA 296
+ ++ + QY+ A G + + LPSGA S+ Q L+ K+
Sbjct: 297 EAASLRVAEQYITAFGNIAKEG-TIMLLPSGASNPASMIAQALTMYKS 343
gb|AAF11687.1|AE002048_7 (AE002048) conserved hypothetical protein [Deinococcus radiodurans]
Length = 344
Score = 75.3 bits (182), Expect = 6e-13
Identities = 62/253 (24%), Positives = 117/253 (45%), Gaps = 17/253 (6%)
Query: 36 ERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEM-TVETKTADNVFVTMNIATQYR 94
ERFGK+Q T PG +L +P+ IDRI +V + ++ + E T DN VT++ Y+
Sbjct: 34 ERFGKFQRTLKPGLNLIIPY-IDRIGRKVNMMEQVFDVPSQEIITKDNALVTVDAVVFYQ 92
Query: 95 VNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQ 154
V + + A Y++ N + + +R+ + LD++ +D I ++ V E +
Sbjct: 93 VLDAA--KASYEVRNLEQAVLNLTMTNIRTVTGSMDLDELLSNRDTINAKLLVVVDEATE 150
Query: 155 TYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAE------- 207
+G + + + ++P A++ SM A+R++ A+ + A + + A+
Sbjct: 151 PWGVKVTRIEVKDIKPPADLVASMARQMKAEREKRANILDAEGFRQAAILKADGEKQAAV 210
Query: 208 --AEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQ 265
AE EK A +R+A + + T + +A Q + + QY++ L
Sbjct: 211 LKAEGEKQASFMESEARERRAQAEA---EATRVVSQAIAGGNVQAVNYFIAQQYVEALRD 267
Query: 266 FAAGGN-STIFLP 277
A+ N T+ LP
Sbjct: 268 VASAPNQKTLILP 280
emb|CAB50468.1| (AJ248288) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
Length = 299
Score = 75.3 bits (182), Expect = 6e-13
Identities = 65/275 (23%), Positives = 135/275 (48%), Gaps = 19/275 (6%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNVF 84
V++ +VER GK+ +PG H +P+ ++R+ V LR ++ E DNV
Sbjct: 27 VIRPYQKGLVERLGKFNRLLDPGIHFIIPF-MERVKV-VDLREHVIDVPPQEVICKDNVV 84
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDA---LRSAVPKLTLDDVFEKKDEI 141
VT++ Y++ + +K Y N + + A ++ A LR+ + ++ LD+ +D I
Sbjct: 85 VTVDAVVYYQILDP-VKAVY----NVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDII 139
Query: 142 ALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQ 201
++++ + + +G I + I +++P +++++M + A+R++ A ++A K
Sbjct: 140 NAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEA 199
Query: 202 VVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLD 261
+ AE + + L G +++ I +G A+ I ++ + DE+ LT QY++
Sbjct: 200 AIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLEALKMADEK-----YLTLQYIE 254
Query: 262 TLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKA 296
L A GN + +P E L ++L +K+
Sbjct: 255 KLPDLAKYGN--LIVPYDTESLIGL-LRVLQKVKS 286
sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|2621777 (AE000848) stomatin-like
protein [Methanobacterium thermoautotrophicum]
Length = 318
Score = 74.9 bits (181), Expect = 7e-13
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPW--GIDRIAARVQLRLLQTEMTVETKTADNV 83
+++ +VER GKYQ T G + +P+ I ++ R Q+ + + E T DN
Sbjct: 21 ILRPYEKGVVERLGKYQRTVESGLVVIIPFIEAIKKVDMREQVVDVPPQ---EVITKDNT 77
Query: 84 FVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIAL 143
V ++ Y V + +A Y +++ + I + LR+ + L LD ++ I
Sbjct: 78 VVVVDCVIFYEVVDPF--NAVYNVVDFYQAITKLAQTNLRNIIGDLELDQTLTSREMINT 135
Query: 144 EVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVV 203
++++ + E +G +V+ I ++EP ++ ++M++ A+R + A+ + A K +
Sbjct: 136 QLREVLDEATDKWGTRVVRVEIQRIEPPGDIVEAMSKQMKAERMKRAAILEAEGYKQSEI 195
Query: 204 TAAEAEAEKDRLHGVGIAEQRK-----------AIVDGLAQQITEIKKLGVALDEEQIMA 252
AE + + L G AE K AI +G A+ I + + A+ E
Sbjct: 196 KRAEGDKQAAILEAEGKAEAIKKVADANKYREIAIAEGQAKAILSVFR---AMHEGDPTN 252
Query: 253 ILLTNQYLDTLNQFAAGGNSTIFLPSGAEG 282
++ +YL+ L + A G + I LP A G
Sbjct: 253 DIIALKYLEALEKVADGRATKILLPVEATG 282
emb|CAA14788| (AJ235271) unknown [Rickettsia prowazekii]
Length = 311
Score = 74.5 bits (180), Expect = 1e-12
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 16/279 (5%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFV 85
VV QQ +VE+ GK+ PG +L +P I R+A + L+ ++T +T + N V
Sbjct: 22 VVPQQQAWVVEKLGKFDKVLQPGLNLLIPI-IQRVAYKHTLKEEAIDVTAQTAIS-NDNV 79
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
T++I V A Y + NP I + +RS + KL LD FE++D + + +
Sbjct: 80 TLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERDTLNVAI 139
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQML----------- 194
+ + +G ++ I ++P + ++M E+ A +Q +Q+L
Sbjct: 140 VSAINQAAINWGIQCMRYEIKDIQPPQTILKAM-ELQVAAERQKRAQILESEGNRQAKIN 198
Query: 195 -ANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAI 253
A K Q+V +EA G AE + A I + +A+
Sbjct: 199 HAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSIEIVAAAIQKTGGSDAVAL 258
Query: 254 LLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILS 292
+ QY+ A N T+ LP+ S T L+
Sbjct: 259 KIAEQYISAFGNLAKDTN-TVILPTNLSEPSSFVTGALT 296
dbj|BAA29558| (AP000002) 298aa long hypothetical membrane protein [Pyrococcus
horikoshii]
Length = 298
Score = 74.5 bits (180), Expect = 1e-12
Identities = 64/269 (23%), Positives = 133/269 (48%), Gaps = 18/269 (6%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNVF 84
V++ +VER GK+ +PG H +P+ ++R+ V LR ++ E DNV
Sbjct: 30 VIRPYQKGLVERLGKFNRLLDPGIHFIIPF-MERVKI-VDLREHVIDVPPQEVICKDNVV 87
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDA---LRSAVPKLTLDDVFEKKDEI 141
VT++ Y+V + +K Y N + + A ++ A LR+ + ++ LD+ +D I
Sbjct: 88 VTVDAVVYYQVIDP-VKAVY----NVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDII 142
Query: 142 ALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQ 201
+++ + + +G I + I +++P +++++M + A+R++ A ++A K
Sbjct: 143 NARLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMILIAEGKKEA 202
Query: 202 VVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLD 261
+ AE + + L G +++ I +G A+ I ++ + + L +E+ +A+ QY++
Sbjct: 203 AIREAEGQKQAAILKAEGEKQRQILIAEGQAEAIRKVLE-ALKLADEKYLAL----QYIE 257
Query: 262 TLNQFAAGGNSTIFLPSGAEGAESLRTQI 290
L + A GN + +P E L I
Sbjct: 258 KLPELARYGN--LIVPYDTESLVGLLRMI 284
sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KD PROTEIN RV1488 >gi|1524234|emb|CAB02038|
(Z79701) hypothetical protein Rv1488 [Mycobacterium
tuberculosis]
Length = 381
Score = 71.4 bits (172), Expect = 8e-12
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 24/287 (8%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
++ Q A++ER G+Y T + L +P+ IDR+ ARV LR + T DN+
Sbjct: 28 LIPQAEAAVIERLGRYSRTVSGQLTLLVPF-IDRVRARVDLRERVVSFPPQPVITEDNL- 85
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
T+NI T + A Y++ N ++ LR+ V +TL+ +D+I +
Sbjct: 86 -TLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQ 144
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
++ + E +G + + + ++P ++ SM + A R++ A + A + +
Sbjct: 145 LRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGTREAAIK 204
Query: 205 AAEAE------------------AEKDRLHGVGIAEQRKAIVDGLAQ-QITEIKKLGVAL 245
AE + AE DR + A+ +A AQ Q I+K A+
Sbjct: 205 QAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQGERAAAYLQAQGQAKAIEKTFAAI 264
Query: 246 DEEQIMAILLTNQYLDTLNQFAAG-GNSTIFLPSGAEGAESLRTQIL 291
+ +L QYL TL + A G N +PS A T++L
Sbjct: 265 KAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFNAALQGFTRLL 311
emb|CAA19027.1| (AL023554) conserved hypothetical protein. [Schizosaccharomyces
pombe]
Length = 354
Score = 70.6 bits (170), Expect = 1e-11
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFV 85
V QQ +VER G++ PG P ID+IA L+ E+ ++ T DNV +
Sbjct: 56 VPQQVAYVVERMGRFSRILTPGVAFLAPI-IDKIAYIHSLKERALEIPTQSAITLDNVSL 114
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
++ +V + A Y + + I + +RS + +LTLD V ++ + + +
Sbjct: 115 GLDGVLYIQVYDPY--KASYGVEDADYAISQLAQTTMRSEIGRLTLDHVLRERQSLNIHI 172
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTA 205
+ + +++G ++ I + P V +M++ +A+R++ A + + + +
Sbjct: 173 TDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQVSAERQKRAEILESEGKRQAAINV 232
Query: 206 AEAEAEKDRLHGVG---------------IAEQRKAIVDGLAQQITEIKKLGVALDEEQI 250
AE + + + L G I E+ A G+A IKK L +
Sbjct: 233 AEGDKQAEILDSEGQKIKTINSALAEAQAIREKASATASGIAVLADSIKKQEHGL---EA 289
Query: 251 MAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIK 295
+++ + QY+ + A NS I +P+ + Q LS K
Sbjct: 290 VSLYIAQQYITNFGKLAKASNSMI-VPASTSDVSGMVAQALSIFK 333
gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium difficile]
Length = 320
Score = 69.5 bits (167), Expect = 3e-11
Identities = 65/290 (22%), Positives = 128/290 (43%), Gaps = 38/290 (13%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
V+KQ V I+ R GK+Q A G H +P+ +D++A + LR + + + T DNV
Sbjct: 25 VIKQSKVGIIMRLGKFQKVAETGVHFLIPF-LDKMAYVIDLREIVIDFPPQPVITKDNVT 83
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
+ ++ Y+V + +++ NP I+ LR+ + +L LD+ + +
Sbjct: 84 MQIDTVVYYKVTDPV--RYVFEIANPIAAIENLTATTLRNIIGELDLDETLTSQRYNKCK 141
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+ E +G + + + + P +++ +M + A+R++ + + A NK +
Sbjct: 142 NENYPDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAIL 201
Query: 205 AAE---------AEAEKDRLHGVGIAEQRKAIV--DGLAQQITE---------------- 237
AE AEA+K+ + V E+ AI+ +G A+ I +
Sbjct: 202 QAEGEKQSAILTAEAKKEAMVRVAEGEKESAILVAEGEAEAIRQTAIAKAQGEAEMIKRT 261
Query: 238 -------IKKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGA 280
+K + A+ E I +L + ++ L + A G ++ + LPS A
Sbjct: 262 QMATAEGLKLVFSAMKEADIDNNILALKSMEALEKMAEGKSTKLVLPSEA 311
sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-TESA INTERGENIC REGION
>gi|1773171 (U82664) similar to M. tuberculosis
MTCY277.09 [Escherichia coli] >gi|1786697 (AE000155)
putative protease [Escherichia coli]
Length = 305
Score = 68.7 bits (165), Expect = 6e-11
Identities = 62/260 (23%), Positives = 116/260 (43%), Gaps = 14/260 (5%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEM-TVETKTADNVF 84
+V Q VERFG+Y T PG L +P+ +DRI ++ + ++ + E + DN
Sbjct: 22 IVPQGYQWTVERFGRYTKTLQPGLSLVVPF-MDRIGRKINMMEQVLDIPSQEVISKDNAN 80
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
VT++ +V + A Y++ N I +R+ + + LD++ ++D I
Sbjct: 81 VTIDAVCFIQVIDAP--RAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSR 138
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+ + V E +G + + I V P AE+ SMN A+R + A + A + +
Sbjct: 139 LLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEIL 198
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQ--------ITEIKKLGVALDEEQIMAILLT 256
AE E + L G E++ A + A++ T++ +A + Q + +
Sbjct: 199 KAEGEKQSQILKAEG--ERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVA 256
Query: 257 NQYLDTLNQFAAGGNSTIFL 276
+Y + L Q + NS + +
Sbjct: 257 QKYTEALQQIGSSSNSKVVM 276
emb|CAB03018.1| (Z81072) predicted using Genefinder; Similarity to Human
erythrocyte band 7 integral membrane protein
(SW:BAN7_HUMAN); cDNA EST yk543b6.3 comes from this gene
[Caenorhabditis elegans]
Length = 334
Score = 68.3 bits (164), Expect = 7e-11
Identities = 62/279 (22%), Positives = 127/279 (45%), Gaps = 15/279 (5%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFV 85
V QQ +VER GK+ PG + LP ID+I LR + E+ + T DNV +
Sbjct: 48 VPQQEAWVVERMGKFYKILEPGLNFLLPI-IDKIKFVQNLREIAIEIPEQGAITIDNVQL 106
Query: 86 TMNIATQYRV-NEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
++ RV + DA Y + +P + + +RS V K+ LD VF++++ +
Sbjct: 107 RLDGVLYLRVFDPYKACDASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKERELLNEN 166
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+ + + +G ++ I ++ ++++++M A+RK+ A+ + + + +
Sbjct: 167 IVFAINKASAPWGIQCMRYEIRDMQMPSKIQEAMQMQVEAERKKRAAILESEGIREAAIN 226
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQI--------TEIKKLGVALDEE---QIMAI 253
AE + + L + +R + G A+ + I+++ +AL+++ +
Sbjct: 227 RAEGDKKSAILASEAVQAERINVAKGEAEAVILKAESRAKAIERIALALEKDGGANAAGL 286
Query: 254 LLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILS 292
+ QY+ A N T+ LP+ S+ +Q L+
Sbjct: 287 TVAEQYVGAFGNLAKESN-TVVLPANLSDPGSMVSQALA 324
sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >gi|1651729|dbj|BAA16657|
(D90899) erthyrocyte band 7 integral membrane protein,
protein 7.2B, stomatin [Synechocystis sp.]
Length = 321
Score = 68.3 bits (164), Expect = 7e-11
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 20/264 (7%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
+V ++ +VER G Y PG + +P +DR+ + R ++ ++ T DNV
Sbjct: 22 IVNEKNEYLVERLGSYNKKLTPGLNFTVPI-LDRVVFKQTTREKVIDIPPQSCITKDNVA 80
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
+T + +R+ + ++ AYYK+ N + + +RS + KL LD F + EI
Sbjct: 81 ITADAVVYWRIID--MEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINEL 138
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+ + + +G + + + + P V SM A+RK+ A+ + + + +
Sbjct: 139 LLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAIN 198
Query: 205 AA---------EAEAEKDRLHGVGIAEQRKAIVDGLAQQ-----ITEIKKLGVALDEEQI 250
+A EAEA+K AEQ+K +++ A +TE KL +
Sbjct: 199 SAQGDAQARVLEAEAKKKAAILNAEAEQQKKVLEAKATAEALSILTE--KLSSDNHAREA 256
Query: 251 MAILLTNQYLDTLNQFAAGGNSTI 274
+ LL QYL+ + +S +
Sbjct: 257 LQFLLAQQYLNMGTTIGSSDSSKV 280
gb|AAF09142.1|AF190167_1 (AF190167) membrane associated protein SLP-2 [Homo sapiens]
Length = 356
Score = 66.0 bits (158), Expect = 4e-10
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 16/282 (5%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFV 85
V QQ +VER G++ PG ++ +P +DRI L+ + + ++ T DNV +
Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPV-LDRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
++ R+ + A Y + +P + + +RS + KL+LD VF +++ + +
Sbjct: 100 QIDGVLYLRIMDPY--KASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTA 205
+ + +G ++ I + VK+SM A+R++ A+ + + + +
Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINV 217
Query: 206 AEAE-------AEKDRLHGVG-IAEQRKAIVDGLAQQITEIKKLGVALDE---EQIMAIL 254
AE + +E ++ + A + A++ + I+ L AL + + ++
Sbjct: 218 AEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAASLT 277
Query: 255 LTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKA 296
+ QY+ ++ A N TI LPS S+ Q + A
Sbjct: 278 VAEQYVSAFSKLAKDSN-TILLPSNPGDVTSMVAQAMGVYGA 318
gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens]
Length = 342
Score = 65.2 bits (156), Expect = 6e-10
Identities = 62/282 (21%), Positives = 121/282 (41%), Gaps = 16/282 (5%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFV 85
V QQ +VER G++ PG ++ +P +DRI L+ + + ++ T DNV +
Sbjct: 27 VPQQEAWVVERMGRFHRILEPGLNILIPV-LDRIRYVQSLKEIVINVPEQSAVTLDNVTL 85
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
++ R+ + A Y + +P + + +RS + KL+LD VF +++ + +
Sbjct: 86 QIDGVLYLRIMDPY--KASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 143
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMN-EINAAQRK----------QDASQML 194
+ + +G ++ I + VK+SM ++ A +RK ++++ +
Sbjct: 144 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRPTVLESEGTRESAINV 203
Query: 195 ANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAIL 254
A K + A+EAE + G A A A+ I + + + ++
Sbjct: 204 AEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAASLT 263
Query: 255 LTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKA 296
+ QY+ ++ A N TI LPS S+ Q + A
Sbjct: 264 VAEQYVSAFSKLAKDSN-TILLPSNPGDVTSMVAQAMGVYGA 304
emb|CAA14591| (AJ235270) HFLK PROTEIN (hflK) [Rickettsia prowazekii]
Length = 344
Score = 62.5 bits (149), Expect = 4e-09
Identities = 55/272 (20%), Positives = 113/272 (41%), Gaps = 34/272 (12%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-------- 78
+K+ A V RFG++ PG + P + I + + E+ T
Sbjct: 70 IKEGEEAAVIRFGRFVRKGYPGLNYHFPSPFENIIVEKVKQSRRIEIGYRTNSSMRSGGD 129
Query: 79 ----------TADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPK 128
T D V++N + ++ +++D + + P E +KA +E ++R +
Sbjct: 130 KNIVSESIMLTGDENIVSLNCDVMWHIS--NLEDFIFNVQRPEETVKATVESSIREVIGN 187
Query: 129 LTLDDVF-EKKDEIALEVQKTVAEEMQTY--GYIIVKTLITKVEPDAEVKQSMNEINAAQ 185
+ V ++K EI +++K + + +Y G +I K + K EP +EV + ++ ++
Sbjct: 188 TPISWVLSDQKQEITYKIEKLAQKILDSYNAGVMIEKVQLLKAEPPSEVIDAYRDVQTSK 247
Query: 186 RKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK---LG 242
++ A A +++ A A K G E+ + +G +Q+ I K G
Sbjct: 248 ADKEKEINQAQAYNNKILPEARGTAAKIIQEAEGYREEVISKAEGDSQRFNAIYKQYATG 307
Query: 243 VALDEEQIMAILLTNQYLDTLNQFAAGGNSTI 274
+ +++ YL+ + + G N TI
Sbjct: 308 RQVTRDRL--------YLEVVEEILGGSNKTI 331
sp|O28852|YE20_ARCFU HYPOTHETICAL PROTEIN AF1420 >gi|2649154 (AE001006) membrane protein
[Archaeoglobus fulgidus]
Length = 249
Score = 60.9 bits (145), Expect = 1e-08
Identities = 63/257 (24%), Positives = 114/257 (43%), Gaps = 41/257 (15%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEM-TVETKTADNVF 84
+VK+ ++ R G+ PG +P + + V LR + ++ + E T DNV
Sbjct: 22 IVKEYERGVIFRLGRLVGARGPGLFFIIPILENMVV--VDLRTVTYDVPSQEVVTKDNVT 79
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
V +N YRV + + A ++ + + LRS + + LD+V ++D++ ++
Sbjct: 80 VKVNAVVYYRVVDPA--KAVTEVFDYQYATAQLAQTTLRSIIGQAELDEVLSERDKLNVK 137
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+Q+ + EE +G + I VE E+++ M
Sbjct: 138 LQQIIDEETNPWGIKVTAVEIKDVELPEEMRRIM-------------------------- 171
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLN 264
A +AEAE++R + AE G Q ++++ L + + AILL +YL TLN
Sbjct: 172 AMQAEAERERRSKIIRAE-------GEYQAAMKLREAADVLAQSE-GAILL--RYLQTLN 221
Query: 265 QFAAGGNSTIFLPSGAE 281
+ +A N+TI +P E
Sbjct: 222 EISAEQNTTIVMPIPVE 238
emb|CAB49571.1| (AJ248285) STOMATIN-LIKE PROTEIN [Pyrococcus abyssi]
Length = 268
Score = 60.5 bits (144), Expect = 2e-08
Identities = 62/243 (25%), Positives = 110/243 (44%), Gaps = 32/243 (13%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNVF 84
+VK+ A++ R G+ PG +P I A V LR ++ V ET T DNV
Sbjct: 27 IVKEYERAVIFRLGRVVGARGPGLFFIIP--IFEKAVIVDLRTQVLDVPVQETITKDNVP 84
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYI-------EDALRSAVPKLTLDDVFEK 137
V +N +RV + + Q+K YI + LRS + + LD++ +
Sbjct: 85 VRVNAVVYFRVVDP---------VKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSE 135
Query: 138 KDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANA 197
+D++ +++Q+ + E +G + I VE A ++++M + A+R++ A LA A
Sbjct: 136 RDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEA 195
Query: 198 NKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTN 257
+ AEK R I+E A+ Q I++ VA D+ ++ ++L
Sbjct: 196 ER--------QAAEKLREAAEIISEHPMALQLRTLQTISD-----VASDKSNVIVLMLPM 242
Query: 258 QYL 260
+ L
Sbjct: 243 EML 245
gi|2984585 (AC004472) P1.11659_4 [Homo sapiens]
Length = 357
Score = 59.7 bits (142), Expect = 3e-08
Identities = 60/296 (20%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFV 85
V QQ +VER G++ PG ++ +P +DRI L+ + + ++ T DNV +
Sbjct: 28 VPQQEAWVVERMGRFHRILEPGLNILIPV-LDRIRYVQSLKEIVINVPEQSAVTLDNVTL 86
Query: 86 TMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEV 145
++ R+ + A Y + +P + + +RS + KL+LD VF +++ + +
Sbjct: 87 QIDGVLYLRIMDPY--KASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 144
Query: 146 QKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMN-EINAAQRKQDASQMLANANKIQVVT 204
+ + +G ++ I + VK+SM ++ A + + + A + + T
Sbjct: 145 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVGAKEGWEKGLRAPVEAERRKRAT 204
Query: 205 AAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK---------------------LGV 243
E+E ++ V +++ I+ A++ +I + L
Sbjct: 205 VLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAA 264
Query: 244 ALDE---EQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKA 296
AL + + ++ + QY+ ++ A N TI LPS S+ Q + A
Sbjct: 265 ALTQHNGDAAASLTVAEQYVSAFSKLAKDSN-TILLPSNPGDVTSMVAQAMGVYGA 319
sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|3257936|dbj|BAA30619| (AP000006)
266aa long hypothetical erythrocyte band7 integral
membrane protein [Pyrococcus horikoshii]
Length = 266
Score = 59.3 bits (141), Expect = 4e-08
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 32/243 (13%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNVF 84
+VK+ A++ R G+ PG +P I A V LR ++ V ET T DNV
Sbjct: 27 IVKEYERAVIFRLGRVVGARGPGLFFIIP--IFEKAVIVDLRTQVLDVPVQETITKDNVP 84
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYI-------EDALRSAVPKLTLDDVFEK 137
V +N +RV + + Q+K YI + LRS + + LD++ +
Sbjct: 85 VRVNAVVYFRVVDP---------VKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSE 135
Query: 138 KDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANA 197
+D++ +++Q+ + E +G + I VE A ++++M A+R++ A LA A
Sbjct: 136 RDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEA 195
Query: 198 NKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTN 257
+ AEK R I+E A+ Q I++ VA D+ ++ ++L
Sbjct: 196 ER--------QAAEKLREAAEIISEHPMALQLRTLQTISD-----VAGDKSNVIVLMLPM 242
Query: 258 QYL 260
+ L
Sbjct: 243 EML 245
gi|2183273 (AF002133) MAV266 [Mycobacterium avium]
Length = 266
Score = 57.8 bits (137), Expect = 1e-07
Identities = 43/181 (23%), Positives = 84/181 (45%), Gaps = 4/181 (2%)
Query: 33 AIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVFVTMNIAT 91
A++ER G+Y T + L +P+ IDRI ARV LR + T DN+ T+NI T
Sbjct: 35 AVIERLGRYSRTVSGSVTLLVPF-IDRIRARVDLRERVVSFPPQPVITEDNL--TLNIDT 91
Query: 92 QYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAE 151
+ A Y++ N ++ +R+ V +TL+ +D+I +++ + E
Sbjct: 92 VVYFQVTVPQAAVYEISNYIVGVEQLTTTTVRNVVGGMTLEQTLTSRDQINGQLRGVLDE 151
Query: 152 EMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAE 211
+G + + + ++P ++ SM + A R++ A + A ++ + A +
Sbjct: 152 ATGRWGLRVARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGSRESAIKEPRARSR 211
Query: 212 K 212
+
Sbjct: 212 R 212
sp|P40605|HFLK_VIBPA HFLK PROTEIN >gi|507734 (U09005) HflK [Vibrio parahaemolyticus]
Length = 400
Score = 57.8 bits (137), Expect = 1e-07
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 34 IVERFGKYQFTANPGFHLKLPWGIDRIAARVQ-LRLLQTEMTVETKTADNVFVTMNIATQ 92
+V R GKY +PG + + + + A VQ +R L+ + TK + V V M++ Q
Sbjct: 100 VVLRLGKYDRIVDPGLNWRPRFIDEYEAVNVQAIRSLRASGLMLTKDENVVTVAMDV--Q 157
Query: 93 YRVNEQSIKDAY---YKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEK-KDEIALEVQKT 148
YRV D Y Y++ N + ++ + ALR+ + +D + + +I Q+T
Sbjct: 158 YRV-----ADPYKYLYRVTNADDSLRQATDSALRAVIGDSLMDSILTSGRQQIRQSTQET 212
Query: 149 VAEEMQTY--GYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAA 206
+ + + +Y G +IV P +VK + ++ AA+ ++ A A K +++ A
Sbjct: 213 LNQIIDSYDMGLVIVDVNFQSARPPEQVKDAFDDAIAAREDEERFIREAEAYKNEILPKA 272
Query: 207 EAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKL 241
AE+ + G E+ + + Q+ + +KL
Sbjct: 273 TGRAERLKKEAQGYNER---VTNEALGQVAQFEKL 304
sp|P25662|HFLK_ECOLI HFLK PROTEIN >gi|280067|pir||B43653 probable integral membrane
proteinase hflK - Escherichia coli >gi|436157 (U00005)
putative integral membrane protein required for high
frequency lysogenization by bacteriophage lambda
[Escherichia coli] >gi|537015 (U14003) CG Site No. 639;
alternate gene name hflA; putative integral membrane
protease required for high frequency lysogenization by
bacteriophage lambda [Escherichia coli] >gi|1790616
(AE000489) protease specific for phage lambda cII
repressor [Escherichia coli]
Length = 419
Score = 55.8 bits (132), Expect = 4e-07
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 6/189 (3%)
Query: 27 VKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVT 86
+K+ +V RFGK+ PG + K P ID + + + + T+D V
Sbjct: 100 IKEAERGVVTRFGKFSHLVEPGLNWK-PTFIDEVKPVNVEAVRELAASGVMLTSDENVVR 158
Query: 87 MNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVF-EKKDEIALEV 145
+ + QYRV + Y + +P + ++ + ALR + K T+D + E + I +
Sbjct: 159 VEMNVQYRVTNP--EKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDT 216
Query: 146 QKTVAEEMQTY--GYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVV 203
Q+ + E ++ Y G ++ P EVK + ++ AA+ + A A +V
Sbjct: 217 QRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ 276
Query: 204 TAAEAEAEK 212
A +A++
Sbjct: 277 PRANGQAQR 285
gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major]
Length = 357
Score = 55.0 bits (130), Expect = 7e-07
Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETK-TADNVF 84
+V Q +VER G+Y T + G+ + +P+ ID+I ++ E+ ++ T+DNV
Sbjct: 64 IVPQGHEYVVERLGRYHRTLDSGWWVVVPF-IDKIRYNYNVKEQGIEIPNQSAITSDNVM 122
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
V ++ ++ + A Y + NP + + +RS + +++LD +F ++ +
Sbjct: 123 VEIDGVLFLKIVDSC--KASYNIENPVFNLINLAQTTMRSEIGRMSLDSLFRERASLNQS 180
Query: 145 VQKTVAEEMQTYGY---------IIVKTLITK---VEPDAEVK----------QSMNEIN 182
+ + E +G I+V L+ + ++ +AE K +S IN
Sbjct: 181 TVEVLRREANEWGIECKRYEIRDIVVSELVRRSMDLQAEAERKKRKLILESEGESTATIN 240
Query: 183 AAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLG 242
A + A Q +A+A K +E A R+ +++ + D + +
Sbjct: 241 RANGMKIAQQCVADAEKYTAERQSEGAAAAIRVKAAAVSDNISIVSDAIEK--------- 291
Query: 243 VALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILS 292
A + +++ + Y++ + A N T+ + TQ LS
Sbjct: 292 -AKHSNEAISLRVAESYIEKFGELAKESN-TVVMSQPVSDPAMFATQALS 339
gb|AAD36886.1|AE001819_9 (AE001819) ftsH protease activity modulator HflC [Thermotoga
maritima]
Length = 283
Score = 55.0 bits (130), Expect = 7e-07
Identities = 52/219 (23%), Positives = 102/219 (45%), Gaps = 25/219 (11%)
Query: 26 VVKQQTVAIVERFGKY-QFTANPGFHLKLPW--GIDRIAARVQLRLLQTEMTVETKTADN 82
V+ Q A+V RFGK PG H K P+ + R R+ L ++ E + AD
Sbjct: 26 VLDQTQQAVVLRFGKIVAVETEPGLHFKQPFVDNVVRFDKRILLYDIEPEKII---AADK 82
Query: 83 VFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAV----PKLTLDDVF-EK 137
+ ++ +R+ + +A+ K + + I+D + S V K D++ EK
Sbjct: 83 KTLVIDTYVLWRIKDA---EAFIKSLKSVKLALPRIDDVVYSHVRNIFAKANFDEIISEK 139
Query: 138 KDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQR----------- 186
++++ EV E+++ +G +V + + AE ++++ E A+R
Sbjct: 140 REDLLREVTALSREDLKDFGIEVVDVRVKHADLPAENEKAVYERMKAERYSIAAQIRAEG 199
Query: 187 KQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRK 225
+++A ++ A A+K V AEA+++ +++ G G A K
Sbjct: 200 EKEARKIRAEADKTAKVLIAEAQSKAEQIKGTGEASAVK 238
dbj|BAA17070| (D90903) hypothetical protein [Synechocystis sp.]
Length = 298
Score = 54.3 bits (128), Expect = 1e-06
Identities = 37/179 (20%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 67 RLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQ---IKAYIEDALR 123
RL + TV+T + + + ++++ QYR+N + + + L + +Q I + +R
Sbjct: 97 RLQDIKETVDTSSKEGLNFNIDVSLQYRLNPEKAGEVFSSLGSEEQQREIIISRFRSLIR 156
Query: 124 SAVPKLTLDDVF-EKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEIN 182
K L ++ +K+ EI+ + +++ E+++ G+++ + L+ V +++
Sbjct: 157 ENTAKYDLSSIYGDKRAEISGVLVQSMKEQLEPLGFVVEEALMRNVILPENIQK------ 210
Query: 183 AAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKL 241
A Q K + Q +N K + +A +AE+ + G+A+ ++ + L QI ++K +
Sbjct: 211 AIQAKVEVEQ--SNQKKQLELISARRDAERKIIEAQGVADSQRILSQSLTDQIIKLKAI 267
sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|2129105|pir||C64403 membrane
protein homolog - Methanococcus jannaschii >gi|1591514
(U67526) membrane protein, putative regulator of cation
conductance [Methanococcus jannaschii]
Length = 199
Score = 53.9 bits (127), Expect = 2e-06
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNVF 84
+V Q ++ R G+ PG ++ +P+ +D + +V +R T++ E T DN
Sbjct: 27 IVNQYEGGLIFRLGRVIGKLKPGINIIIPF-LD-VPVKVDMRTRVTDIPPQEMITKDNAV 84
Query: 85 VTMNIATQYRVNEQS-----IKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKD 139
V ++ YRV + ++D Y ++N + LR+ + + LD+V K++
Sbjct: 85 VKVDAVVYYRVIDVEKAILEVEDYEYAIIN-------LAQTTLRAIIGSMELDEVLNKRE 137
Query: 140 EIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANK 199
I ++ + + E +G I K + +++P ++K +M + A+R + A+ + A K
Sbjct: 138 YINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEK 197
ref|NP_031557.1|| B-cell receptor-associated protein 37 >gi|1085496|pir||S46996
B-cell receptor-associated protein BAP37 - mouse
>gi|541734|emb|CAA55350| (X78683) IgM B-cell receptor
associated protein (BAP) 37 [Mus musculus]
Length = 298
Score = 53.5 bits (126), Expect = 2e-06
Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 39 GKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQ 98
G Q T FH ++PW I ++ R +++ T + D V +++ R N Q
Sbjct: 57 GVQQDTILAEFHFRIPWFQYPIIYDIRAR--PRKISSPTGSKDLQMVNISLRVLSRPNAQ 114
Query: 99 SIKDAYYKLMNPGEQ--IKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTY 156
+ Y +L E+ + + + + L+S V K + ++ +++L +++ + E + +
Sbjct: 115 ELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDF 174
Query: 157 GYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQML---ANANKIQVVTAAEAEAEKD 213
I+ IT++ E ++ AQ++ +Q L A + Q + AE EAE
Sbjct: 175 SLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAA 234
Query: 214 RLHGVGIAE 222
++ G +++
Sbjct: 235 KMLGEALSK 243
dbj|BAA81164.1| (AP000063) 278aa long hypothetical erythrocyte band 7 integral
membrane protein [Aeropyrum pernix]
Length = 278
Score = 52.3 bits (123), Expect = 5e-06
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVE-TKTADNVF 84
+V++ A++ R G+ PG L +P+ +D + +V LR++ ++ + T T DNV
Sbjct: 41 IVREYERAVIFRLGRLIGVKGPGLFLIIPF-VDTLV-KVDLRIVTVDIPEQRTITKDNVT 98
Query: 85 VTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALE 144
V ++ Y+V + + A ++ N + + LR + ++ LDD+ K++EI +
Sbjct: 99 VGVDAVVYYKVFDP--EKAVVRIENYHYAVVMLAQTTLRDVIGQVELDDLLTKREEINKK 156
Query: 145 VQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVT 204
+Q+ + + +G + I +V+ + ++M + A+R + A + A +
Sbjct: 157 LQEILDQLTDPWGIKVTAVTIKEVKLPESMLRAMAKQAEAERWRRARIIEAEGERQAAKI 216
Query: 205 AAEA 208
AEA
Sbjct: 217 MAEA 220
gi|2983432 (AE000713) erythrocyte band 7 homolog [Aquifex aeolicus]
Length = 253
Score = 52.3 bits (123), Expect = 5e-06
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 51/268 (19%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEM-TVETKTADNVF 84
V+ + A+V R G+ PG + +P IDRI RV LR + ++ T + T DNV
Sbjct: 25 VIPEYERAVVFRLGRVIGAKGPGLIIVIPI-IDRIV-RVSLRTVTLDVPTQDVITKDNVT 82
Query: 85 VTMNIATQYRVNEQ-----SIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKD 139
V ++ +RV + ++D +Y + LRS + LD++ +++
Sbjct: 83 VQVDAVVYFRVVDPVKAIVEVEDYFYATSQ-------IAQTTLRSVCGEAELDELLSQRE 135
Query: 140 EIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANK 199
+I +++Q+ + + +G ++ + K++ E+++++ A+R++ A
Sbjct: 136 KINMKLQEIIDRQTDPWGVKVIAVELKKIDLPEELRKALARQAEAERERRAK-------- 187
Query: 200 IQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQY 259
+ +AEAE + AQ++ E ++ L +E I L +Y
Sbjct: 188 ---IISAEAEYQ-------------------AAQKLLEAARI---LAQEPIAIQL---RY 219
Query: 260 LDTLNQFAAGGNSTIFLPSGAEGAESLR 287
L+TL+ T+ P E E ++
Sbjct: 220 LETLHTIGLHNAKTVIFPFPLELVEFMK 247
sp|O32076|YUAG_BACSU HYPOTHETICAL 56.0 KD PROTEIN IN GLGB-GBSB INTERGENIC REGION
>gi|2635585|emb|CAB15079| (Z99119) alternate gene name:
yuaH; similar to epidermal surface antigen [Bacillus
subtilis]
Length = 509
Score = 51.5 bits (121), Expect = 8e-06
Identities = 30/128 (23%), Positives = 67/128 (51%), Gaps = 6/128 (4%)
Query: 112 EQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPD 171
++ + +E LRS + +T++++++ +++ + EVQ+ ++++ G +IV I V
Sbjct: 133 QEAREVLEGHLRSILGSMTVEEIYKNREKFSQEVQRVASQDLAKMGLVIVSFTIKDVRDK 192
Query: 172 AEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGL 231
+S+ + AQ K+DA A A+K + AEA+ + + +E +A
Sbjct: 193 NGYLESLGKPRIAQVKRDADIATAEADKETRIKRAEADKDAKK------SELERATEIAE 246
Query: 232 AQQITEIK 239
A++I ++K
Sbjct: 247 AEKINQLK 254
gb|AAD36885.1|AE001819_8 (AE001819) ftsH protease activity modulator HflK [Thermotoga
maritima]
Length = 308
Score = 49.2 bits (115), Expect = 4e-05
Identities = 50/233 (21%), Positives = 98/233 (41%), Gaps = 40/233 (17%)
Query: 32 VAIVERFGKYQFTANPGFHLKLPWGIDRIAA---------RVQLRLLQTEMTVETK---- 78
VA+++ FG++ G H LP+ I + R +Q + +
Sbjct: 29 VALLKTFGRFTSVVPSGIHYHLPYPIQSHVTVDVTTVRKIEIGFRSIQRGERISYQSVPQ 88
Query: 79 -----TADNVFVTMNIATQYRVNEQSIKDAY-YKLMNPGEQIKAYIEDALRSAVPKLTLD 132
T DN V++ QYRV + AY + + ++ E LR V ++D
Sbjct: 89 EAIMITGDNNLVSVEAVVQYRVKDPV---AYAFNITEADSIVRFTTESVLREKVAMRSID 145
Query: 133 DVFEK-KDEIALEVQKTVAEEMQTY--GYIIVKTLITKVEPDAEVKQSMNEINAAQRKQD 189
DV +DEI + + + E + +Y G + + +V P V + +++N A +QD
Sbjct: 146 DVLTSGRDEIGFKTAQMLQEILDSYNCGIKVENVYLQEVVPPDPVVDAFDDVNNA--RQD 203
Query: 190 ASQMLANANKI-------------QVVTAAEAEAEKDRLHGVGIAEQRKAIVD 229
+++ A K +++ AEA A++ L +G A++ + +++
Sbjct: 204 KERLINEARKYANDVVPKAQGQAQEILRQAEAYAQEVYLKALGEAKRFEEVLE 256
emb|CAA21750.1| (AL032659) predicted using Genefinder; similar to Erythrocyte band
7 protein [Caenorhabditis elegans]
Length = 298
Score = 47.6 bits (111), Expect = 1e-04
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 43/255 (16%)
Query: 26 VVKQQTVAIVERFGKYQ--FTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADN 82
V ++ A++ R G+ + PG +P ID ++ LR L E+ E + D
Sbjct: 57 VAQEYERAVIFRLGRVKPGGARGPGLFFVVPC-IDSYK-KIDLRTLSFEVPPQELLSKDA 114
Query: 83 VFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIA 142
V V ++ +R++ +I + + + K + LR+ + TL ++ +D I+
Sbjct: 115 VTVAVDAVVFFRISNATI--SVINIEDAARSTKLLAQTTLRNILGTKTLTEMLSDRDVIS 172
Query: 143 LEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQV 202
L++Q T+ E +G KVE + M ++ + +Q
Sbjct: 173 LQMQATLDETTIPWG--------VKVE-----RVEMKDVRLPYQ-------------LQR 206
Query: 203 VTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDT 262
V AAEAEA +D + + AE K LA+ A D + + +YL T
Sbjct: 207 VMAAEAEATRDAMAKIIAAEGEKNASTALAE----------AADVISMSPCAIQLRYLQT 256
Query: 263 LNQFAAGGNSTIFLP 277
LN ++ N+TI P
Sbjct: 257 LNSISSEKNNTIVFP 271
gi|2622911 (AE000933) stomatin-like protein [Methanobacterium
thermoautotrophicum]
Length = 297
Score = 46.9 bits (109), Expect = 2e-04
Identities = 59/259 (22%), Positives = 107/259 (40%), Gaps = 51/259 (19%)
Query: 26 VVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEM-TVETKTADNVF 84
+VKQ +V R GK PG + +P IDR+ RV LR++ + + + T DNV
Sbjct: 66 IVKQYERGVVFRLGKVIGVREPGLRIIIPI-IDRMV-RVSLRIVTMPIPSQKIITQDNVS 123
Query: 85 VTMNIATQYRVNEQ-----SIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKD 139
+ + ++V + +I+D YY +N Q +R+ + + LD+V +
Sbjct: 124 IDVAAVAYFKVADPLRAVVAIED-YYGAVNQISQT------TVRNVIGQFVLDEVLSETA 176
Query: 140 EIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANK 199
I ++++ + E + +G + I ++ ++++M
Sbjct: 177 RINEKIKEIIDEHSEPWGINVTTVEIKDIKLPEGMQRAM--------------------- 215
Query: 200 IQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQY 259
A +AEAE+D+ + AE + KLG A D + + L +
Sbjct: 216 -----ARQAEAERDKRAKIITAEG----------EYFSAAKLGEAADVIEKHPVALQLRN 260
Query: 260 LDTLNQFAAGGNSTIFLPS 278
L L + A NSTI P+
Sbjct: 261 LQVLAEIATEKNSTIVFPA 279
sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|pir||S60260 stomatin-like
protein - Caenorhabditis elegans >gi|973210 (U26735)
MEC-2 [Caenorhabditis elegans] >gi|973212 (U26736) MEC-2
[Caenorhabditis elegans] >gi|1086680 (U41021) C. elegans
mec-2 (GB:U26735) [Caenorhabditis elegans]
>gi|1585780|prf||2201490A stomatin-like protein
[Caenorhabditis elegans]
Length = 481
Score = 46.9 bits (109), Expect = 2e-04
Identities = 58/255 (22%), Positives = 108/255 (41%), Gaps = 43/255 (16%)
Query: 26 VVKQQTVAIVERFGKYQ--FTANPGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADN 82
VV++ A++ R G+ PG +P ID +V LR+L E+ E + D+
Sbjct: 143 VVQEYERAVIFRLGRLMPGGAKGPGIFFIVPC-IDTYR-KVDLRVLSFEVPPQEILSKDS 200
Query: 83 VFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIA 142
V V ++ +R++ +I + + + K + LR+ + TL ++ ++ I+
Sbjct: 201 VTVAVDAVVYFRISNATI--SVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAIS 258
Query: 143 LEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQV 202
++Q T+ E + +G + + + V +++++M
Sbjct: 259 HQMQTTLDEATEPWGVKVERVEVKDVRLPVQLQRAM------------------------ 294
Query: 203 VTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDT 262
AAEAEA ++ V +AE Q+ + K + E A+ L +YL T
Sbjct: 295 --AAEAEAAREARAKVIVAEGE--------QKASRALKEAAEVIAESPSALQL--RYLQT 342
Query: 263 LNQFAAGGNSTIFLP 277
LN +A NSTI P
Sbjct: 343 LNSISAEKNSTIIFP 357
emb|CAA18987| (AL023517) hypothetical protein SC1B5.13c [Streptomyces coelicolor]
Length = 262
Score = 44.5 bits (103), Expect = 0.001
Identities = 46/188 (24%), Positives = 89/188 (46%), Gaps = 6/188 (3%)
Query: 26 VVKQQTVAIVERFGKYQFTAN-PGFHLKLPWGIDRIAARVQLRLLQTEMTV-ETKTADNV 83
VVKQ +V R G+ A PGF + +P+ +DR+ +V ++++ + E T DNV
Sbjct: 26 VVKQYERGVVFRLGRLAGQARGPGFTMIVPF-VDRLH-KVNMQIITLPVPAQEGITRDNV 83
Query: 84 FVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIAL 143
V ++ ++V + + +A ++ + + + +LRS + K LDD+ ++++
Sbjct: 84 TVRVDAVVYFKVVDAA--NALVRVEDYRFAVSQMAQTSLRSIIGKSDLDDLLSDREKLNQ 141
Query: 144 EVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVV 203
++ + +G I + I V +K+SM A R++ A + A+A
Sbjct: 142 GLELMIDSPAVGWGVQIDRVEIKDVSLPDTMKRSMARQAEADRERRARVINADAELQASK 201
Query: 204 TAAEAEAE 211
AEA E
Sbjct: 202 VLAEAARE 209
gi|2231128 (L36867) growth-associated protein [Carassius auratus]
Length = 428
Score = 43.8 bits (101), Expect = 0.002
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 55 WGIDRIAARVQLRLLQTEMTVE-TKTADNVFVTMNIATQYRV--NEQSIKDAYYKLMNPG 111
W + R+ L ++ + E +TA+ V +T+ Q +V ++ + A + +
Sbjct: 36 WWLISDTQRITLEIMTLQPKCEDVETAEGVAITVTGVAQVKVMTDQDLLAVACEQFLGKS 95
Query: 112 E-QIKAYI----EDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLIT 166
+IKA + E LRS + LT++ +++ +DE A V++ A ++ G I+ I
Sbjct: 96 VMEIKAVVLQTLEGHLRSILGTLTVEQIYQDRDEFARLVREVAAPDVGRMGIEILSFTIK 155
Query: 167 KVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKA 226
V + S+ + A ++DA +A A + + EAE +K+ + +A+ R A
Sbjct: 156 DVYDKLDYLSSLGKTQTAAVQRDADIGVAEAERDAGI--REAECKKEMMDVKFLADTRMA 213
gi|3115387 (AF044916) flotillin-2 [Drosophila melanogaster]
Length = 376
Score = 43.4 bits (100), Expect = 0.002
Identities = 26/92 (28%), Positives = 48/92 (51%)
Query: 118 IEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQS 177
+E LR+ + LT+++V++ +D+ A V++ A ++ G I+ I V D + S
Sbjct: 58 LEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLAS 117
Query: 178 MNEINAAQRKQDASQMLANANKIQVVTAAEAE 209
+ + A K+DA +A AN+ + AE E
Sbjct: 118 LGKGQTAVVKRDADAGVAEANRDAGIREAECE 149
emb|CAA16891.1| (AL021749) prohibitin-like protein [Arabidopsis thaliana]
>gi|4097688 (U66591) prohibitin 1 [Arabidopsis thaliana]
>gi|4097694 (U66594) prohibitin 1 [Arabidopsis thaliana]
Length = 288
Score = 42.2 bits (97), Expect = 0.005
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 16/220 (7%)
Query: 48 GFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKL 107
G HL +PW + V+ R E T ++ V + + + T R + + Y L
Sbjct: 62 GTHLMIPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLT--RPMADQLPEIYRSL 119
Query: 108 -MNPGEQI-KAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLI 165
N E++ + I + L++ V + + +++ ++ E++K + E + + I
Sbjct: 120 GENYSERVLPSIINETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNVALDDVSI 179
Query: 166 TKVEPDAEVKQSMNEINAAQRKQDASQML---ANANKIQVVTAAEAEAEKDRLHGVGIAE 222
T + E ++ A ++ + ++ + A +K V A+ EA+ +L G IA
Sbjct: 180 TNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIAN 239
Query: 223 QRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDT 262
Q ++K+ A + Q +A YL +
Sbjct: 240 N---------QAFITLRKIEAAREIAQTIANSANKVYLSS 270
ref|NP_032857.1|| prohibitin >gi|130020|sp|P24142|PHB_MOUSE PROHIBITIN (B-CELL
RECEPTOR ASSOCIATED PROTEIN 32) (BAP 32)
>gi|92643|pir||A39682 prohibitin - rat >gi|206384
(M61219) prohibitin [Rattus norvegicus]
>gi|541732|emb|CAA55349| (X78682) prohibitin or B-cell
receptor associated protein (BAP) 32 [Mus musculus]
Length = 272
Score = 42.2 bits (97), Expect = 0.005
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 16/219 (7%)
Query: 34 IVERF-GKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVTMNI--- 89
I +RF G G H +PW I + R + +K NV +T+ I
Sbjct: 38 IFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFR 97
Query: 90 --ATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQK 147
A+Q SI + Y + + P + + L+S V + ++ +++ ++ +V
Sbjct: 98 PVASQLPRIYTSIGEDYDERVLP-----SITTEILKSVVARFDAGELITQRELVSRQVSD 152
Query: 148 TVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAE 207
+ E T+G I+ +T + E +++ AQ++ + ++ + + Q AA
Sbjct: 153 DLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAE-QQKKAAI 211
Query: 208 AEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALD 246
AE D IA DGL E++KL A D
Sbjct: 212 ISAEGDSKAAELIANSLATAGDGL----IELRKLEAAED 246
ref|NP_002625.1|| prohibitin >gi|464371|sp|P35232|PHB_HUMAN PROHIBITIN
>gi|2135978|pir||I52690 prohibitin - human
>gi|246483|bbs|85658 (S85655) prohibitin [human,
Peptide, 272 aa] [Homo sapiens]
Length = 272
Score = 41.8 bits (96), Expect = 0.007
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 16/219 (7%)
Query: 34 IVERF-GKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVTMNI--- 89
I +RF G G H +PW I + R + +K NV +T+ I
Sbjct: 38 IFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFR 97
Query: 90 --ATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQK 147
A+Q SI + Y + + P + + L+S V + ++ +++ ++ +V
Sbjct: 98 PVASQLPRIFTSIGEDYDERVLP-----SITTEILKSVVARFDAGELITQRELVSRQVSD 152
Query: 148 TVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAE 207
+ E T+G I+ +T + E +++ AQ++ + ++ + + Q AA
Sbjct: 153 DLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAE-QQKKAAI 211
Query: 208 AEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKKLGVALD 246
AE D IA DGL E++KL A D
Sbjct: 212 ISAEGDSKAAELIANSLATAGDGL----IELRKLEAAED 246
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.315 0.130 0.343
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59725760
Number of Sequences: 457798
Number of extensions: 2081268
Number of successful extensions: 7490
Number of sequences better than 1.0e-02: 49
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7422
Number of HSP's gapped (non-prelim): 52
length of query: 298
length of database: 140,871,481
effective HSP length: 64
effective length of query: 234
effective length of database: 111,572,409
effective search space: 26107943706
effective search space used: 26107943706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 95 (41.4 bits)