Score E
Sequences producing significant alignments: (bits) Value
sp|O32823|TRXB_LISMO THIOREDOXIN REDUCTASE >gi|2246749 (AF0... 367 e-101
sp|P80880|TRXB_BACSU THIOREDOXIN REDUCTASE (GENERAL STRESS ... 351 5e-96
emb|CAB60740.1| (Y18636) thioredoxine reductase [Staphyloco... 347 9e-95
emb|CAA11546| (AJ223781) thioredoxin reductase [Staphylococ... 344 6e-94
sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE >gi|2117556|pir|... 280 1e-74
pir||D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Eu... 277 7e-74
sp|P50971|TRXB_EUBAC THIOREDOXIN REDUCTASE >gi|1353197 (L04... 277 7e-74
dbj|BAA30532| (AP000006) 336aa long hypothetical thioredoxi... 268 6e-71
emb|CAB42713.1| (AL049826) thioredoxin reductase (NADPH) [S... 265 3e-70
emb|CAA07451| (AJ007313) thioredoxin reductase (NADPH) [Str... 265 3e-70
sp|P52215|TRXB_STRCO THIOREDOXIN REDUCTASE >gi|4376081|emb|... 264 6e-70
sp|O83790|TRXB_TREPA THIOREDOXIN REDUCTASE >gi|3323124 (AE0... 263 1e-69
gb|AAD35951.1|AE001753_7 (AE001753) thioredoxin reductase [... 263 1e-69
gb|AAF11534.1|AE002036_5 (AE002036) thioredoxin reductase [... 262 2e-69
emb|CAB49645.1| (AJ248285) thioredoxin reductase (trxB) [Py... 262 2e-69
sp|P23160|R34K_CLOPA 34.2 KD PROTEIN IN RUBREDOXIN OPERON (... 257 1e-67
sp|Q05741|TRXB_STRCL THIOREDOXIN REDUCTASE >gi|1076065|pir|... 255 4e-67
emb|CAA63075| (X92104) thioredoxin reductase [Streptomyces ... 252 3e-66
sp|Q9ZD97|TRXB_RICPR THIOREDOXIN REDUCTASE >gi|3861002|emb|... 245 5e-64
emb|CAB61258.1| (AJ251005) putative thioredoxin reductase [... 244 8e-64
gb|AAD18463| (AE001616) Thioredoxin Reductase [Chlamydia pn... 243 2e-63
sp|O30973|TRXB_MYCSM THIOREDOXIN REDUCTASE >gi|2511764 (AF0... 238 5e-62
sp|P51978|TRXB_NEUCR THIOREDOXIN REDUCTASE >gi|757510|dbj|B... 236 2e-61
emb|CAA65070| (X95798) thioredoxin [Mycobacterium tuberculo... 235 4e-61
gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase ... 233 2e-60
sp|P52214|TRXB_MYCTU THIOREDOXIN REDUCTASE (TR) >gi|2808698... 232 3e-60
sp|P46843|TRXB_MYCLE BIFUNCTIONAL THIOREDOXIN REDUCTASE/THI... 232 3e-60
ref|NP_010640.1|TRR1| Thioredoxin reductase; Trr1p >gi|1717... 232 3e-60
emb|CAB54874.1| (AL117188) thioredoxin reductase (NADPH) 2 ... 225 3e-58
pdb|1VDC| Structure Of Nadph Dependent Thioredoxin Reductase 223 2e-57
gb|AAC67690.1| (AE001284) Thioredoxin Reductase [Chlamydia ... 222 2e-57
gb|AAB86519.1| (AC002329) putative thioredoxin reductase [A... 222 2e-57
gi|2621795 (AE000850) thioredoxin reductase [Methanobacteri... 220 1e-56
sp|Q92375|TRXB_SCHPO THIOREDOXIN REDUCTASE >gi|1498486 (U63... 217 8e-56
gb|AAF30479.1|AE002107_3 (AE002107) thioredoxin reductase [... 216 2e-55
pir||S44027 thioredoxin reductase (NADPH) (EC 1.6.4.5) B - ... 216 2e-55
dbj|BAA80046.1| (AP000060) 343aa long hypothetical thioredo... 215 3e-55
gi|4155329 (AE001507) THIOREDOXIN REDUCTASE [Helicobacter p... 215 4e-55
gi|2649006 (AE000995) thioredoxin reductase (trxB) [Archaeo... 213 1e-54
sp|P56431|TRXB_HELPY THIOREDOXIN REDUCTASE >gi|2313959|gb|A... 213 2e-54
gi|520501 (U10274) thioredoxin reductase [Saccharomyces cer... 210 1e-53
sp|Q39243|TRB1_ARATH THIOREDOXIN REDUCTASE 1 (NADPH-DEPENDE... 209 3e-53
gb|AAB84351.1| (AC002510) putative thioredoxin reductase [A... 207 1e-52
sp|P43788|TRXB_HAEIN THIOREDOXIN REDUCTASE >gi|1075348|pir|... 206 1e-52
ref|NP_011974.1|TRR2| mitochondrial thioredoxin reductase; ... 203 2e-51
sp|P43496|TRXB_PENCH THIOREDOXIN REDUCTASE >gi|1078637|pir|... 201 6e-51
sp|P75531|TRXB_MYCPN THIOREDOXIN REDUCTASE >gi|2146661|pir|... 197 1e-49
gi|2983154 (AE000693) thioredoxin reductase [Aquifex aeolicus] 195 4e-49
sp|P47348|TRXB_MYCGE THIOREDOXIN REDUCTASE >gi|1361862|pir|... 194 8e-49
emb|CAB72630.1| (AL139074) thioredoxin reductase [Campyloba... 194 1e-48
sp|Q39242|TRB2_ARATH THIOREDOXIN REDUCTASE 2 (NADPH-DEPENDE... 194 1e-48
pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxi... 192 4e-48
pdb|1TDE| Thioredoxin Reductase (E.C.1.6.4.5) (Wild Type) 192 4e-48
sp|P09625|TRXB_ECOLI THIOREDOXIN REDUCTASE >gi|66129|pir||R... 192 4e-48
sp|P94284|TRXB_BORBU THIOREDOXIN REDUCTASE >gi|2688441 (AE0... 190 9e-48
sp|P81433|TRXB_BUCAP THIOREDOXIN REDUCTASE >gi|2947035 (L43... 189 2e-47
gi|1785609 (U82978) thioredoxin reductase [Borrelia burgdor... 189 2e-47
pdb|1TDF| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With... 188 6e-47
pdb|1TRB| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With... 188 6e-47
sp|P39916|TRXB_COXBU THIOREDOXIN REDUCTASE >gi|1075485|pir|... 188 6e-47
sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT ... 187 1e-46
pir||G64491 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Me... 186 2e-46
sp|O82864|AHPF_PSEPU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT ... 186 2e-46
sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT ... 186 2e-46
gb|AAD52148.1|AF129406_2 (AF129406) alkyl hydroperoxide red... 184 7e-46
sp|P19480|AHPF_SALTY ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT ... 183 2e-45
emb|CAA56112| (X79603) disulphide oxidoreductase [Entamoeba... 183 2e-45
sp|P42974|DHNA_BACSU NADH DEHYDROGENASE (ALKYL HYDROPEROXID... 179 2e-44
gi|1778524 (U82598) AhpF homolog [Escherichia coli] >gi|178... 178 4e-44
sp|P35340|AHPF_ECOLI ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT ... 178 4e-44
sp|P26829|DHNA_BACSP NADH DEHYDROGENASE (ALKYL HYDROPEROXID... 175 5e-43
pir||A49911 NADH oxidase (hydrogen peroxide-forming) (EC 1.... 171 7e-42
gb|AAC82839.1| (AF016485) trxB [Halobacterium sp. NRC-1] >g... 171 9e-42
dbj|BAA25696| (AB010712) NADH oxidase/alkyl hydroperoxidase... 164 1e-39
pir||JC2311 NADH oxidase (hydrogen peroxide-forming) (EC 1.... 164 1e-39
emb|CAB57297.1| (AJ243598) NADH oxidase [Sulfolobus solfata... 126 2e-28
emb|CAB51948.1| (AJ243915) thioredoxin reductase [Staphyloc... 106 3e-22
emb|CAB07954.1| (Z93939) thioredoxine reductase [Bacillus s... 103 2e-21
dbj|BAA75319.1| (AB011836) alkyl hydroperoxide reductase la... 99 6e-20
emb|CAB12121| (Z99105) similar to thioredoxin reductase [Ba... 94 1e-18
dbj|BAA21091| (D86223) glutamate synthase [Pyrococcus sp.] 92 6e-18
emb|CAA14966| (AJ235272) THIOREDOXIN REDUCTASE (trxB2) [Ri... 89 5e-17
gb|AAD35465.1|AE001718_2 (AE001718) NADH oxidase [Thermotog... 88 1e-16
dbj|BAA18866| (D90917) hypothetical protein [Synechocystis ... 86 4e-16
emb|CAB50632.1| (AJ248288) GLUTAMATE SYNTHASE SMALL CHAIN. ... 80 2e-14
dbj|BAA29970| (AP000004) 472aa long hypothetical glutamate ... 80 2e-14
sp|P35484|DLDH_ACHLA DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COM... 80 3e-14
sp|P08663|MERA_STAAU MERCURIC REDUCTASE (HG(II) REDUCTASE) ... 78 1e-13
gb|AAD35227.1|AE001699_4 (AE001699) thioredoxin reductase-r... 76 3e-13
emb|CAB61613.1| (AL133210) putative reductase [Streptomyces... 76 4e-13
emb|CAB49858.1| (AJ248286) GLUTAMATE SYNTHASE SMALL CHAIN [... 76 4e-13
dbj|BAA30995.1| (AP000007) 476aa long hypothetical glutamat... 76 5e-13
sp|P75393|DLDH_MYCPN DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COM... 75 8e-13
pir||JC4089 3alpha,7alpha,12alpha-trihydroxycholestan-26-al... 74 2e-12
gb|AAD43039.1|AF108213_1 (AF108213) NADPH-dependent thiored... 73 2e-12
gi|3582500 (U63923) thioredoxin reductase [Rattus rattus] >... 73 2e-12
gb|AAF15900.1|AF208018_1 (AF208018) thioredoxin reductase [... 72 5e-12
gi|406456 (U02197) Homology to thioredoxin reductase M60116... 72 7e-12
dbj|BAA86985.1| (AB027565) thioredoxin reductase 1 [Mus mus... 71 9e-12
sp|P90597|DLDH_TRYCR DIHYDROLIPOAMIDE DEHYDROGENASE >gi|184... 71 1e-11
ref|NP_003321.1|| thioredoxin reductase 1 >gi|2500118|sp|Q1... 71 1e-11
sp|O62768|TRXB_BOVIN THIOREDOXIN REDUCTASE 70 3e-11
gi|3323040 (AE001245) glutamate synthase (gltA) [Treponema ... 70 3e-11
gi|2997700 (AF053984) thioredoxin reductase [Bos taurus] 70 3e-11
gi|3820535 (AF077367) thioredoxin reductase GRIM-12 [Homo s... 69 4e-11
gb|AAD18970| (AE001663) Lipoamide Dehydrogenase [Chlamydia ... 69 5e-11
emb|CAA04503| (AJ001050) thioredoxin reductase [Homo sapiens] 69 5e-11
dbj|BAA13674| (D88687) KM-102-derived reductase-like factor... 69 5e-11
gb|AAD51325.1|AF171055_1 (AF171055) thioredoxin reductase T... 68 1e-10
emb|CAA73084| (Y12481) glutamine--pyruvate aminotransferase... 68 1e-10
gi|2648692 (AE000975) NADH oxidase (noxA-5) [Archaeoglobus ... 68 1e-10
emb|CAA72132| (Y11262) dihydrolipoamide dehydrogenase [Tryp... 68 1e-10
gb|AAD39929.1|AF133519_1 (AF133519) thioredoxin reductase 3... 67 2e-10
sp|P23189|GSHR_PSEAE GLUTATHIONE REDUCTASE (GR) (GRASE) >gi... 67 2e-10
emb|CAA72131| (Y11261) dihydrolipoamide dehydrogenase [Tryp... 66 3e-10
dbj|BAA08961| (D50453) homologue of thioredoxin reductase o... 66 4e-10
gb|AAD36503.1|AE001795_6 (AE001795) oxidoreductase, putativ... 66 5e-10
gb|AAD35836.1|AE001745_3 (AE001745) oxidoreductase [Thermot... 65 7e-10
gi|2984275 (AE000770) glutamate synthase small subunit gltD... 65 7e-10
emb|CAA15231| (AJ235273) DIHYDROLIPOAMIDE DEHYDROGENASE (p... 65 9e-10
pir||E35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Cl... 65 9e-10
emb|CAA70224| (Y09024) mercuric reductase [Bacillus cereus] 64 2e-09
sp|P42433|NASB_BACSU ASSIMILATORY NITRATE REDUCTASE ELECTRO... 64 2e-09
emb|CAA71040| (Y09907) mercuric reductase [Bacillus megater... 63 3e-09
gi|536838 (L36129) NADPH thioredoxin reductase [Helianthus ... 63 3e-09
gb|AAD56915.1|AF180145_7 (AF180145) glutamate synthase smal... 63 4e-09
gi|2649317 (AE001017) NADH oxidase (noxB-2) [Archaeoglobus ... 62 8e-09
emb|CAB49194.1| (AJ248283) PROBABLE MONOOXYGENASE [Pyrococc... 61 1e-08
emb|CAA76564| (Y16963) thioredoxin reductase [Klebsiella ox... 61 1e-08
emb|CAA05635| (AJ002606) redA2 [Sphingomonas sp.] 61 1e-08
gi|2650172 (AE001073) NADH oxidase (noxB-1) [Archaeoglobus ... 61 1e-08
gb|AAF16001.1|AF187159_1 (AF187159) TrxB [Streptomyces coel... 61 2e-08
sp|P16171|MERA_BACSR MERCURIC REDUCTASE (HG(II) REDUCTASE) ... 61 2e-08
emb|CAB61868.1| (AL133252) putative oxidoreductase [Strepto... 60 3e-08
dbj|BAA86117.1| (AB024961) MerA [Clostridium butyricum] 60 3e-08
emb|CAA67822| (X99457) mercuric reductase [Exiguobacterium ... 59 4e-08
gi|2650233 (AE001077) NADH oxidase (noxA-3) [Archaeoglobus ... 59 4e-08
gb|AAF09991.1|AE001901_6 (AE001901) pyridine nucleotide-dis... 59 5e-08
gb|AAD17483| (AF047034) dihydrolipoamide dehydrogenase [Str... 59 5e-08
dbj|BAA29661| (AP000002) 445aa long hypothetical NADH oxida... 59 5e-08
dbj|BAA30863.1| (AP000007) 482aa long hypothetical D-nopali... 58 1e-07
emb|CAA73495| (Y13052) ORF454 [Staphylococcus sciuri] 57 2e-07
emb|CAB50317.1| (AJ248287) NADH oxidase (noxA-1) [Pyrococcu... 57 2e-07
emb|CAA73535| (Y13094) ORF503 [Staphylococcus sciuri] 57 2e-07
gi|1263179 (U24215) p-cumate dioxygenase ferredoxin reducta... 55 6e-07
emb|CAB49234.1| (AJ248284) sarcosine oxidase, subunit alpha... 55 1e-06
sp|P95596|DLDH_RHOCA DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COM... 55 1e-06
gb|AAD36707.1|AE001806_17 (AE001806) glutamate synthase, be... 54 2e-06
gi|1788468 (AE000303) putative oxidoreductase [Escherichia ... 53 3e-06
emb|CAA71191| (Y10104) mercuric reductase [Bacillus cereus] 52 7e-06
gi|2983078 (AE000688) putative protein [Aquifex aeolicus] 52 9e-06
emb|CAA17417| (AL021933) hypothetical protein Rv0462 [Mycob... 51 1e-05
pir||S57658 glutathione reductase - Plasmodium falciparum >... 51 2e-05
gb|AAD08209.1| (AE000622) thioredoxin reductase (trxB) [Hel... 50 2e-05
pir||S35706 NADH oxidase - Thermoanaerobacter brockii 49 4e-05
gi|3169863 (AF031406) NADPH dependent glutamate synthase sm... 49 6e-05
gi|2649644 (AE001038) NADH oxidase (noxA-4) [Archaeoglobus ... 49 6e-05
sp|P43783|GSHR_HAEIN GLUTATHIONE REDUCTASE (GR) (GRASE) >gi... 49 6e-05
sp|P32382|NADO_THEBR NADH OXIDASE >gi|98755|pir||S25102 NAD... 49 6e-05
sp|P94702|MERA_ENTAG MERCURIC REDUCTASE (HG(II) REDUCTASE) ... 48 8e-05
pir||S55381 glutathione reductase - Plasmodium falciparum (... 48 8e-05
emb|CAA58583| (X83603) thioredoxin reductase [Plasmodium fa... 48 8e-05
gi|832876 (L41345) ascorbate free radical reductase [Solanu... 48 8e-05
gi|2792490 (AF041467) coenzyme A disulfide reductase [Staph... 48 1e-04
emb|CAA70231| (Y09025) mercuric reductase [Enterobacter clo... 48 1e-04
gi|887828 (U28375) was o492p and o826p before splice [Esche... 48 1e-04
emb|CAB69774.1| (AL137187) putative nitrite reductase [Stre... 46 4e-04
dbj|BAA12349| (D84417) monodehydroascorbate reductase [Arab... 46 4e-04
gi|4155677 (AE001536) putative THIOREDOXIN REDUCTASE [Helic... 46 5e-04
dbj|BAA25627| (D88021) ferredoxin reductase [Rhodococcus er... 45 7e-04
sp|P54805|YNH2_METBA HYPOTHETICAL 19.9 KD PROTEIN IN NIFH2 ... 45 7e-04
sp|P10331|FIXC_BRAJA FIXC PROTEIN >gi|1209050 (U32228) FixC... 45 9e-04
gi|2650363 (AE001086) sarcosine oxidase, subunit alpha (sox... 45 0.001
dbj|BAA81436.1| (AP000064) 436aa long hypothetical electoro... 44 0.001
dbj|BAA77214.1| (D85764) cytosolic monodehydroascorbate red... 43 0.003
emb|CAB13727| (Z99113) glutamate synthase (small subunit) [... 43 0.003
sp|P31046|DLD3_PSEPU DIHYDROLIPOAMIDE DEHYDROGENASE 3 (LPD-... 43 0.004
emb|CAA19251| (AL023702) putative flavoprotein oxidoreducta... 42 0.006
sp|P80892|TRXB_VIBFI THIOREDOXIN REDUCTASE 42 0.006
sp|P77337|YDIS_ECOLI PROBABLE ELECTRON TRANSFER FLAVOPROTEI... 42 0.006
sp|Q53208|FIXC_RHISN FIXC PROTEIN >gi|1486437|emb|CAA92415|... 42 0.008
sp|O32823|TRXB_LISMO THIOREDOXIN REDUCTASE >gi|2246749 (AF009622) thioredoxin reductase
[Listeria monocytogenes]
Length = 319
Score = 367 bits (932), Expect = e-101
Identities = 177/305 (58%), Positives = 225/305 (73%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPE 62
EK YDV+IIG+GPAGMTAA+YT+R+++ TL++ERGVPGGQM NTAE+ENYPG+++I+GP+
Sbjct: 5 EKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQMVNTAEVENYPGFDSILGPD 64
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG 122
LS KM + G E AYG + + D ++K + + ++IIIATGA HRKL G
Sbjct: 65 LSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAG 124
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
EEE RGVSYCAVCDGAFF+N+E++V+GGGDSAVEE YLTR+ VTI+HRRDKLRAQ
Sbjct: 125 EEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQ 184
Query: 183 EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP 242
+I+Q RAFK+EK++FIW+S EI GD KKV + G + G+FIYVGL P
Sbjct: 185 QILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVP 244
Query: 243 VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
+ + NLGITD+ G+I+TD+ MRT+LPGIFA GDVR K RQI TA GDG A Q A K
Sbjct: 245 LTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNAQK 304
Query: 303 FVAEL 307
+V EL
Sbjct: 305 YVEEL 309
sp|P80880|TRXB_BACSU THIOREDOXIN REDUCTASE (GENERAL STRESS PROTEIN 35) (GSP35)
>gi|1945648|emb|CAB08055| (Z94043) hypothetical protein
[Bacillus subtilis] >gi|2635992|emb|CAB15484| (Z99121)
thioredoxin reductase [Bacillus subtilis]
Length = 316
Score = 351 bits (891), Expect = 5e-96
Identities = 166/305 (54%), Positives = 225/305 (73%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPE 62
EK YDV+IIG+GPAGMTAA+YT+R+ + TL++ERG+PGGQM NT ++ENYPG+E+I+GPE
Sbjct: 4 EKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDVENYPGFESILGPE 63
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG 122
LS KM E + G E AYG + + D +YK + E+ +++IIA GA ++K+ +PG
Sbjct: 64 LSNKMFEHAKKFGAEYAYGDIKEVIDGKEYKVVKAGSKEYKARAVIIAAGAEYKKIGVPG 123
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
E+E G RGVSYCAVCDGAFF+ +E++V+GGGDSAVEE +YLTRF VTI+HRRDKLRAQ
Sbjct: 124 EKELGGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQ 183
Query: 183 EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP 242
I+Q RAF EK++F+W+ EI ++ KV +V + TGE +E G+FIY+G+ P
Sbjct: 184 SILQARAFDNEKVDFLWNKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLP 243
Query: 243 VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
+++ NLGIT+E G+I T+D M T + GIFA GD+R+K RQI TA GDG+ AAQ
Sbjct: 244 LSKPFENLGITNEEGYIETNDRMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQSVQH 303
Query: 303 FVAEL 307
+V EL
Sbjct: 304 YVEEL 308
emb|CAB60740.1| (Y18636) thioredoxine reductase [Staphylococcus aureus]
Length = 311
Score = 347 bits (880), Expect = 9e-95
Identities = 165/308 (53%), Positives = 219/308 (70%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
MTE +D+ IIG+GPAGMTAA+Y +R+ +KT+++ERG+PGGQM NT E+EN+PG+E I G
Sbjct: 1 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG 60
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P+LS KM E + G YG + ++ED G+YK I + E K++IIATGA ++K+ +
Sbjct: 61 PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV 120
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE+E G RGVSYCAVCDGAFF+N+ + VIGGGDSAVEE +LT+F VTI+HRRD+LR
Sbjct: 121 PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 180
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
AQ I+Q RAFK +KI+FIW I D KV SV + K G G+FIY+G+
Sbjct: 181 AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM 240
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P+ +LGIT++ G+I+T D M TS+PGIFA GDVR K RQI TA GDG+ AAQ A
Sbjct: 241 KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA 300
Query: 301 YKFVAELD 308
+++ L+
Sbjct: 301 AEYIEHLN 308
emb|CAA11546| (AJ223781) thioredoxin reductase [Staphylococcus aureus]
Length = 311
Score = 344 bits (873), Expect = 6e-94
Identities = 164/308 (53%), Positives = 217/308 (70%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
MTE +D+ IIG+GPAGMTAA+Y +R+ +KT+++ERG+PGGQM NT E+EN+PG+E I G
Sbjct: 1 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG 60
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P+LS KM E + G YG + ++ED G+YK I + E K++IIATGA ++K+ +
Sbjct: 61 PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAGYKKIGV 120
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE+E G RGVSYCAVCDGAFF+N+ + VIGGGDSAVEE +LT+F VTI+HRRD+LR
Sbjct: 121 PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 180
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
AQ I+Q RAFK +KI+FIW I D KV SV + K G G+FIY+G+
Sbjct: 181 AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM 240
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P+ +LGIT++ G+I+T D M TS+PGIFA GDVR K RQI TA GDG+ AAQ
Sbjct: 241 KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQST 300
Query: 301 YKFVAELD 308
++ L+
Sbjct: 301 SGYIEHLN 308
sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE >gi|2117556|pir||S63990 thioredoxin reductase
chain B - Clostridium litorale >gi|1171125 (U24268)
thioredoxin reductase [Clostridium litorale]
Length = 315
Score = 280 bits (709), Expect = 1e-74
Identities = 148/312 (47%), Positives = 203/312 (64%), Gaps = 8/312 (2%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMGP 61
E YD+ IIGSGPAG+ AA+Y AR++MKTLLLE GGQ+ T E+ NYPG GP
Sbjct: 2 ENVYDIAIIGSGPAGLAAALYGARAKMKTLLLEGMKVGGQIVITHEVANYPGSVPEATGP 61
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
L +M E +E G E + ++ K + E+ K++I+ATGA+ + P
Sbjct: 62 SLIGRMEEQVEEFGAERVMDNIVDVDFTDKIKVLKGAKGEYKAKAVIVATGASPKLAGCP 121
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
GE+E +GVSYCA CD FF + E+ VIGGGD+AVEEA++LT+F + VTI+HRR +LRA
Sbjct: 122 GEKELTGKGVSYCATCDADFFEDMEVFVIGGGDTAVEEAMFLTKFARKVTIVHRRAELRA 181
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVT------EKAFGGIF 235
+ IQ++AFK EK+NF+W++V EIKGD V+S V+KN +TGEVT E GIF
Sbjct: 182 AKSIQEKAFKNEKLNFMWNTVIEEIKGDG-IVESAVFKNRETGEVTEFVAPEEDGTFGIF 240
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQ 295
+++G DP + DE G+I TDD+M+T++ G+FA GD+R K RQ+ TA DGA
Sbjct: 241 VFIGYDPKSALVEGKLELDETGYIPTDDNMKTNVEGVFAAGDIRVKSLRQVVTATADGAI 300
Query: 296 AAQEAYKFVAEL 307
AA +A K++ EL
Sbjct: 301 AAVQAEKYIEEL 312
pir||D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Eubacterium
acidaminophilum
Length = 315
Score = 277 bits (702), Expect = 7e-74
Identities = 147/310 (47%), Positives = 203/310 (65%), Gaps = 10/310 (3%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMGP 61
E YD+ IIGSGPAG+ AA+Y AR++MKT+++E GGQ+ T E+ NYPG GP
Sbjct: 2 ENVYDLAIIGSGPAGLAAALYGARAKMKTIMIEGQKVGGQIVITHEVANYPGSVREATGP 61
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
L +M E G E + ++ G K I E E+ KS+I+ATGA R P
Sbjct: 62 SLIERMEEQANEFGAEKVMDKIVDVDLDGKIKVIKGEKAEYKAKSVILATGAAPRLAGCP 121
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
GE+E +GVSYCA CD FF + E+ V+GGGD+AVEEA+YL +F + VTI+HRRD+LRA
Sbjct: 122 GEQELTGKGVSYCATCDADFFEDMEVFVVGGGDTAVEEAMYLAKFARKVTIVHRRDELRA 181
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVT------EKAFGGIF 235
+ IQ++AFK K++F+W+S EIKGD V+S V+KN+ TGE T E GIF
Sbjct: 182 AKSIQEKAFKNPKLDFMWNSAIEEIKGDG-IVESAVFKNLVTGETTEYFANEEDGTFGIF 240
Query: 236 IYVGLDPVAE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+++G P ++ F G + + D+AG+IITDD+M+T++ G+FA GD+R K RQ+ TA DGA
Sbjct: 241 VFIGYIPKSDVFKGKITL-DDAGYIITDDNMKTNVDGVFAAGDIRVKSLRQVVTACADGA 299
Query: 295 QAAQEAYKFV 304
AA +A K+V
Sbjct: 300 IAATQAEKYV 309
sp|P50971|TRXB_EUBAC THIOREDOXIN REDUCTASE >gi|1353197 (L04500) thioredoxin reductase
[Eubacterium acidaminophilum]
Length = 315
Score = 277 bits (702), Expect = 7e-74
Identities = 147/310 (47%), Positives = 203/310 (65%), Gaps = 10/310 (3%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMGP 61
E YD+ IIGSGPAG+ AA+Y AR++MKT+++E GGQ+ T E+ NYPG GP
Sbjct: 2 ENVYDLAIIGSGPAGLAAALYGARAKMKTIMIEGQKVGGQIVITHEVANYPGSVREATGP 61
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
L +M E G E + ++ G K I E E+ KS+I+ATGA R P
Sbjct: 62 SLIERMEEQANEFGAEKVMDKIVDVDLDGKIKVIKGEKAEYKAKSVILATGAAPRLAGCP 121
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
GE+E +GVSYCA CD FF + E+ V+GGGD+AVEEA+YL +F + VTI+HRRD+LRA
Sbjct: 122 GEQELTGKGVSYCATCDADFFEDMEVFVVGGGDTAVEEAMYLAKFARKVTIVHRRDELRA 181
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVT------EKAFGGIF 235
+ IQ++AFK K++F+W+S EIKGD V+S V+KN+ TGE T E GIF
Sbjct: 182 AKSIQEKAFKNPKLDFMWNSAIEEIKGDG-IVESAVFKNLVTGETTEYFANEEDGTFGIF 240
Query: 236 IYVGLDPVAE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+++G P ++ F G + + D+AG+IITDD+M+T++ G+FA GD+R K RQ+ TA DGA
Sbjct: 241 VFIGYIPKSDVFKGKITL-DDAGYIITDDNMKTNVEGVFAAGDIRVKSLRQVVTACADGA 299
Query: 295 QAAQEAYKFV 304
AA +A K+V
Sbjct: 300 IAATQAEKYV 309
dbj|BAA30532| (AP000006) 336aa long hypothetical thioredoxin reductase
[Pyrococcus horikoshii]
Length = 336
Score = 268 bits (677), Expect = 6e-71
Identities = 150/310 (48%), Positives = 203/310 (65%), Gaps = 13/310 (4%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMGPE 62
K +DV+IIG+GPAG TAA+Y AR + T+++ + + GG M T IENYPG+ E I G E
Sbjct: 22 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSE 80
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIED------HGDYKKII--TEDDEFVTKSIIIATGAN 114
LS KM + ++ GVE V I+ G ++ E+ K+IIIA GA
Sbjct: 81 LSKKMYDQVKKYGVEVIIDEVIRIDPAECAYYEGPCNFVVKTANGKEYKAKTIIIAVGAE 140
Query: 115 HRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMH 174
RKL +PGE+E+ RGVSYCA CDG F +E++V+GGG++A++EALYL G VT++H
Sbjct: 141 PRKLNVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVH 200
Query: 175 RRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGI 234
RRDK RA +I+Q R FK+ I I ++V EIKG + KV+SVV KNVKTGE EK G+
Sbjct: 201 RRDKFRADKILQDR-FKQAGIPAILNTVVTEIKGTN-KVESVVLKNVKTGETVEKKVDGV 258
Query: 235 FIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
FI++G +P +F +LGITDE G+I D +MRT +PGIFA GD+ F+QI A+G GA
Sbjct: 259 FIFIGYEPKTDFVKHLGITDEYGYIPVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGA 317
Query: 295 QAAQEAYKFV 304
AA A +F+
Sbjct: 318 IAANSAKEFI 327
emb|CAB42713.1| (AL049826) thioredoxin reductase (NADPH) [Streptomyces coelicolor]
Length = 322
Score = 265 bits (671), Expect = 3e-70
Identities = 142/305 (46%), Positives = 198/305 (64%), Gaps = 5/305 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYET-IMGPELS 64
+V+IIGSGPAG TAA+YTAR+ +K L+ E V GG + NT E+EN+PG++ IMGPEL
Sbjct: 6 NVIIIGSGPAGYTAALYTARASLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMGPELM 65
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANHRKLEIPGE 123
M E G E V A++ G+ K + T K++I+ TG+ HRKL +P E
Sbjct: 66 DNMRAQAERFGAELIPDDVVAVDLSGEIKTVTDTAGTVHRAKAVIVTTGSQHRKLGLPNE 125
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+ RGVS+CA CDG FF++Q+I VIGGGD+A+EEA +L+RF +SVTI+HRRD LRA +
Sbjct: 126 DALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKSVTIVHRRDTLRASK 185
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPV 243
+Q+RAF + KI+F+WDS E++G D+K+ + +NVKTGE+++ G+FI +G DP
Sbjct: 186 AMQERAFADPKISFVWDSEVAEVQG-DQKLAGLKLRNVKTGELSDLPVTGLFIAIGHDPR 244
Query: 244 AE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
E F G L + E + RT+L G+F GDV +RQ TA G G AA +A +
Sbjct: 245 TELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITAAGTGCSAALDAER 304
Query: 303 FVAEL 307
F+A L
Sbjct: 305 FLAAL 309
emb|CAA07451| (AJ007313) thioredoxin reductase (NADPH) [Streptomyces coelicolor]
Length = 322
Score = 265 bits (671), Expect = 3e-70
Identities = 142/305 (46%), Positives = 197/305 (64%), Gaps = 5/305 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYET-IMGPELS 64
+V+IIGSGPAG TAA+YTAR +K L+ E V GG + NT E+EN+PG++ IMGPEL
Sbjct: 6 NVIIIGSGPAGYTAALYTARRSLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMGPELM 65
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANHRKLEIPGE 123
M +G G E V A++ G+ K + T K++I+ TG+ HRKL +P E
Sbjct: 66 DNMRAQADGFGAELIPDDVVAVDLSGEIKTVTDTAGTVHRAKAVIVTTGSQHRKLGLPNE 125
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+ RGVS+CA CDG FF++Q+I VIGGGD+A+EEA +L+RF +SVTI+HRRD LRA +
Sbjct: 126 DALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKSVTIVHRRDTLRASK 185
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPV 243
+Q+RAF + KI+F+WDS E++G D+K+ + +NVKTGE+++ G+FI +G DP
Sbjct: 186 AMQERAFADPKISFVWDSEVAEVQG-DQKLAGLKLRNVKTGELSDLPVTGLFIAIGHDPR 244
Query: 244 AE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
E F G L + E + RT+L G+F GDV +RQ TA G G AA +A
Sbjct: 245 TELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITAAGTGCSAAVDAEP 304
Query: 303 FVAEL 307
F+A L
Sbjct: 305 FLAAL 309
sp|P52215|TRXB_STRCO THIOREDOXIN REDUCTASE >gi|4376081|emb|CAA63076| (X92105)
thioredoxin reductase (NADPH) [Streptomyces coelicolor]
Length = 322
Score = 264 bits (668), Expect = 6e-70
Identities = 142/305 (46%), Positives = 197/305 (64%), Gaps = 5/305 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYET-IMGPELS 64
+V+IIGSGPAG TAA+YTAR+ +K L+ E V GG + NT E+EN+PG++ IMGPEL
Sbjct: 6 NVIIIGSGPAGYTAALYTARASLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMGPELM 65
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANHRKLEIPGE 123
M E G E V A++ G+ K + T K++I+ TG+ HRKL +P E
Sbjct: 66 DNMRAQAERFGAELIPDDVVAVDLSGEIKTVTDTAGTVHRAKAVIVTTGSQHRKLGLPNE 125
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+ RGVS+CA CDG FF++Q+I VIGGGD+A+EEA +L+RF +SVTI+HRRD LRA +
Sbjct: 126 DALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKSVTIVHRRDTLRASK 185
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPV 243
+Q+RAF + KI+F+WDS E++G D+K+ + +NVKTGE+++ G+FI +G DP
Sbjct: 186 AMQERAFADPKISFVWDSEVAEVQG-DQKLAGLKLRNVKTGELSDLPVTGLFIAIGHDPR 244
Query: 244 AE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
E F G L + E + RT+L G+F GDV +RQ TA G G AA +A
Sbjct: 245 TELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITAAGTGCSAAVDAEP 304
Query: 303 FVAEL 307
F+A L
Sbjct: 305 FLAAL 309
sp|O83790|TRXB_TREPA THIOREDOXIN REDUCTASE >gi|3323124 (AE001252) thioredoxin reductase
(trxB) [Treponema pallidum]
Length = 307
Score = 263 bits (666), Expect = 1e-69
Identities = 139/306 (45%), Positives = 188/306 (61%), Gaps = 3/306 (0%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGP 61
E YDV+I+G+G AG++AA Y R+ ++TL++E GGQ +ENYPGY T I G
Sbjct: 2 ETDYDVIIVGAGAAGLSAAQYACRANLRTLVIESKAHGGQALLIDSLENYPGYATPISGF 61
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
E + M + G + AY VT I I T + S+I+ATGA HRK+ IP
Sbjct: 62 EYAENMKKQAVAFGAQIAYEEVTTIGKRDSVFHITTGTGAYTAMSVILATGAEHRKMGIP 121
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
GE E+ RGVSYCA CDG FFRN+ ++VIGGGD+A +E+L L+R VT++HRRD LRA
Sbjct: 122 GESEFLGRGVSYCATCDGPFFRNKHVVVIGGGDAACDESLVLSRLTDRVTMIHRRDTLRA 181
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLD 241
Q+ I +R K I W++ ++G + KV SV+ K+VKTGE E A +F ++G+
Sbjct: 182 QKAIAERTLKNPHIAVQWNTTLEAVRG-ETKVSSVLLKDVKTGETRELACDAVFFFIGMV 240
Query: 242 PVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
P+ + D G+I+TDD MRTS+ GIFA GDVR K FRQ+ TA DGA AA A
Sbjct: 241 PITGLLPD-AEKDSTGYIVTDDEMRTSVEGIFAAGDVRAKSFRQVITATSDGALAAHAAA 299
Query: 302 KFVAEL 307
++ L
Sbjct: 300 SYIDTL 305
gb|AAD35951.1|AE001753_7 (AE001753) thioredoxin reductase [Thermotoga maritima]
Length = 317
Score = 263 bits (665), Expect = 1e-69
Identities = 130/300 (43%), Positives = 195/300 (64%), Gaps = 4/300 (1%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS 64
KYD+V++G GPAG+T+A+Y R+ + L++E+ + GG +N T +ENYPG+ I G EL+
Sbjct: 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYPGFPAISGEELA 76
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDD--EFVTKSIIIATGANHRKLEIPG 122
K E E G + V +E GD KK++ DD +I+ATGAN +KL +PG
Sbjct: 77 SKFKEHAEKFGADIYNAEVVKLEVQGD-KKVVELDDGKRIEAPVVIVATGANPKKLNVPG 135
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
E+E+ +GVSYCA CDG F ++++V+GGGDSA +E+++L+ +T++ + L A
Sbjct: 136 EKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDESIFLSNIVNKITMIQLLETLTAA 195
Query: 183 EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP 242
+++Q+R KI I++S EI+G D KV+ VV +NVKTGE G+FI++GLDP
Sbjct: 196 KVLQERVLNNPKIEVIYNSTVREIRGKD-KVEEVVIENVKTGETKVLKADGVFIFIGLDP 254
Query: 243 VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
++ L D G++ITD++M TS+ GI+AVGDVR+K+ RQI TA+ DGA A + A K
Sbjct: 255 NSKLLEGLVELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVEHAAK 314
gb|AAF11534.1|AE002036_5 (AE002036) thioredoxin reductase [Deinococcus radiodurans]
Length = 325
Score = 262 bits (663), Expect = 2e-69
Identities = 134/312 (42%), Positives = 202/312 (63%), Gaps = 6/312 (1%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMG 60
T YDVVIIG GPAG+TAA+YT R+++ TL+LE+G+PGGQ+ + E+EN+PG+ E I G
Sbjct: 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAG 64
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIE----DHGDYKKIITEDDEFVTKSIIIATGANHR 116
EL+ +M + E G + V ++ H + + E+ K++I+ATGA+ R
Sbjct: 65 MELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124
Query: 117 KLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRR 176
KL IPGE+ + +GVS CA CDG F++ ++++VIGGGD+AVEE ++LT+F VT++HRR
Sbjct: 125 KLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRR 184
Query: 177 DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFI 236
D LRA ++ Q RAF K+ FIWD+ EI+G D V V +N+KTGEV+E A G+FI
Sbjct: 185 DTLRANKVAQARAFANPKMKFIWDTAVEEIQGAD-SVSGVKLRNLKTGEVSELATDGVFI 243
Query: 237 YVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQA 296
++G P F + + G++ D + T++P +FA GDV +RQ+ T++G G +A
Sbjct: 244 FIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRA 303
Query: 297 AQEAYKFVAELD 308
A + +A L+
Sbjct: 304 AMMTERQLAALE 315
emb|CAB49645.1| (AJ248285) thioredoxin reductase (trxB) [Pyrococcus abyssi]
Length = 345
Score = 262 bits (663), Expect = 2e-69
Identities = 146/310 (47%), Positives = 202/310 (65%), Gaps = 13/310 (4%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMGPE 62
K +DV+IIG+GPAG TAA+Y AR + T+++ + + GG M T IENYPG+ E I G E
Sbjct: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSE 89
Query: 63 LSMKMAEPLEGLGVENAYGFVTAI--------EDHGDYKKIITEDDEFVTKSIIIATGAN 114
L+ +M E ++ GV+ + V I E ++ E+ K+IIIA GA
Sbjct: 90 LAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAE 149
Query: 115 HRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMH 174
RKL +PGE+E+ RGVSYCA CDG F +E++V+GGG++A++EALYL G VT++H
Sbjct: 150 PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVH 209
Query: 175 RRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGI 234
RRDK RA +I+Q R K+ I I ++V EI+G + KV+SVV KNVKTGE EK G+
Sbjct: 210 RRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGV 267
Query: 235 FIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
FI++G +P +F +LGITDE G+I D +MRT +PGIFA GD+ F+QI A+G GA
Sbjct: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGA 326
Query: 295 QAAQEAYKFV 304
AA A +F+
Sbjct: 327 IAANSAKEFI 336
sp|P23160|R34K_CLOPA 34.2 KD PROTEIN IN RUBREDOXIN OPERON (ORF A) >gi|322212|pir||S29117
hypothetical protein 1 - Clostridium pasteurianum
>gi|144906 (M60116) product homologous to E.coli
thioredoxin reductase: J.Biol.Chem. (1988)
263:9015-9019, and to F52a protein of alkyl
hydroperoxide reductase from S.typhimurium: J.Biol.Chem.
(1990) 265:10535-10540; open reading frame A
[Clostridium pa...
Length = 308
Score = 257 bits (649), Expect = 1e-67
Identities = 127/303 (41%), Positives = 202/303 (65%), Gaps = 2/303 (0%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPE 62
EK+ D+VIIG+GPAG+TAA+Y R+++ TL+LE + GGQ+ T +EN+PG+ I G +
Sbjct: 4 EKQLDLVIIGAGPAGLTAAIYAIRAKLNTLVLENELVGGQIRETYTVENFPGFNVISGAD 63
Query: 63 LSMKMAEPLEGLGVE-NAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
L+ KM E +GV + + + I+ D K I TED + K++IIATGA R+L IP
Sbjct: 64 LADKMEEHAASIGVNIDQFSNIEKIKLSDDEKIIETEDVIYKVKALIIATGAKSRRLPIP 123
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
EE+ + + YC +CDGA ++ ++++V+GGG+SAVE A++LT++ +++TI+H+ D L+A
Sbjct: 124 EEEKLHGKVIHYCELCDGALYQGKDLVVVGGGNSAVEAAIFLTKYARNITIVHQFDYLQA 183
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLD 241
Q+ Q FK + + IWDS I G++ +++ +V +NVKT + TE G+F+Y+G +
Sbjct: 184 QKYSQDELFKHKNVKIIWDSEIRNIVGEN-EIEKIVVENVKTKQKTELKADGVFVYIGYE 242
Query: 242 PVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
P E + ++ G+I TD++M T++ G+FA GDVR K RQ+TTA+ DG AA A
Sbjct: 243 PKTELFKDSININKWGYIETDENMETNIKGVFAAGDVRSKLIRQLTTAVSDGTVAALMAE 302
Query: 302 KFV 304
K++
Sbjct: 303 KYI 305
sp|Q05741|TRXB_STRCL THIOREDOXIN REDUCTASE >gi|1076065|pir||A53307 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Streptomyces clavuligerus
>gi|581639|emb|CAA79940| (Z21946) thioredoxin reductase
[Streptomyces clavuligerus]
Length = 322
Score = 255 bits (644), Expect = 4e-67
Identities = 139/306 (45%), Positives = 197/306 (63%), Gaps = 7/306 (2%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGY-ETIMGPELS 64
+V+IIGSGPAG TAA+YTAR+ ++ L+ E V GG + NT ++EN+PG+ + IMGP+L
Sbjct: 6 NVIIIGSGPAGYTAALYTARASLQPLVFEGAVTAGGALMNTTDVENFPGFRDGIMGPDLM 65
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV--TKSIIIATGANHRKLEIPG 122
M E G E V +++ GD K + T+ V K++I+ TG+ HRKL +P
Sbjct: 66 DNMRAQAERFGAELIPDDVVSVDLTGDIKTV-TDSAGTVHRAKAVIVTTGSQHRKLGLPR 124
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
E+ RGVS+CA CDG FF++Q+I+V+GGGD+A+EEA +L+RF +SVTI+HRRD LRA
Sbjct: 125 EDALSGRGVSWCATCDGFFFKDQDIVVVGGGDTAMEEATFLSRFAKSVTIVHRRDSLRAS 184
Query: 183 EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP 242
+ +Q RAF + KI+F W+S I G ++K+ + ++ KTGE E A G+FI VG DP
Sbjct: 185 KAMQDRAFADPKISFAWNSEVATIHG-EQKLTGLTLRDTKTGETRELAATGLFIAVGHDP 243
Query: 243 VAE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
E F G L + DE + RT+L G+FA GDV +RQ TA G G AA +A
Sbjct: 244 RTELFKGQLDLDDEGYLKVASPSTRTNLTGVFAAGDVVDHTYRQAITAAGTGCSAALDAE 303
Query: 302 KFVAEL 307
+++A L
Sbjct: 304 RYLAAL 309
emb|CAA63075| (X92104) thioredoxin reductase [Streptomyces coelicolor]
Length = 320
Score = 252 bits (637), Expect = 3e-66
Identities = 141/306 (46%), Positives = 197/306 (64%), Gaps = 9/306 (2%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYET-IMGPELS 64
+V+IIGSGPAG TAA+YTAR +K L+ E V GG + NT E+EN+PG++ IMGPEL
Sbjct: 6 NVIIIGSGPAGYTAALYTARRSLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMGPELM 65
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANHRKLEIPGE 123
M +G G E V A++ G+ K + T K++I+ TG+ HRKL +P E
Sbjct: 66 DNMRAQADGFGAELIPDDVVAVDLSGEIKTVTDTAGTVHRAKAVIVTTGSQHRKLGLPNE 125
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+ RGVS+CA CDG FF++Q+I VIGG D+A+EEA +L+RF +SVTI+HRRD LRA +
Sbjct: 126 DALSGRGVSWCATCDGFFFKDQDIAVIGG-DTAMEEATFLSRFAKSVTIVHRRDTLRASK 184
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPV 243
+Q+RAF + KI+F+WDS E++G D+K+ + +NVKTGE+++ +FI +G DP
Sbjct: 185 AMQERAFADPKISFVWDSEVAEVQG-DQKLAGLKLRNVKTGELSDLPVTALFIAIGHDPR 243
Query: 244 AE-FAGNLGITDEAGWIITD-DHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
E F G L + E ++ D RT+L G+F GDV +RQ TA G G AA +A
Sbjct: 244 TELFKGQLDLDPE--YLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITAAGTGCSAAVDAE 301
Query: 302 KFVAEL 307
F+A L
Sbjct: 302 PFLAAL 307
sp|Q9ZD97|TRXB_RICPR THIOREDOXIN REDUCTASE >gi|3861002|emb|CAA14902| (AJ235271)
THIOREDOXIN REDUCTASE (trxB1) [Rickettsia prowazekii]
Length = 310
Score = 245 bits (618), Expect = 5e-64
Identities = 136/302 (45%), Positives = 187/302 (61%), Gaps = 5/302 (1%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMGPELSMK 66
V+IIGSGPAG++AA+YTARS +K +L+ PGGQ+ T ++ENYPG+ ETI GP L +
Sbjct: 7 VLIIGSGPAGLSAAIYTARSALKPILINGMQPGGQLTMTTDVENYPGFAETIQGPWLMEQ 66
Query: 67 MAEPLEGLGVENAYGFVTAIEDHGDYKKIIT-EDDEFVTKSIIIATGANHRKLEIPGEEE 125
M+ + +G E +V ++ KI T +E+ SIII TGA + L I E+E
Sbjct: 67 MSMQAKNVGTEIISDYVERVDLSKRPFKIFTGTGNEYEADSIIICTGAESKWLGIASEQE 126
Query: 126 YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEII 185
+ GVS CA+CDG FF+NQEI+V+GGG+SA+EEALYLT VT++HRR+ RA++I+
Sbjct: 127 FRGFGVSSCAICDGFFFKNQEIVVVGGGNSALEEALYLTNHANKVTVVHRRNSFRAEKIL 186
Query: 186 QQRAFKEEKINFIWDSVPMEIKGDD--KKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP- 242
Q R FK KI+ IWD + EI G + K V V +NV T E+ G+FI +G P
Sbjct: 187 QDRLFKNPKISVIWDHIIDEIVGSNKPKAVTGVKIQNVYTNEINLVNCSGVFIAIGHAPN 246
Query: 243 VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
A F G + I D+ + RT++ G+FA GDV+ K +RQ TA G AA E K
Sbjct: 247 TALFKGQIAIDDDNYIVTQSGSTRTNVEGVFAAGDVQDKIYRQAVTAAASGCMAALEVAK 306
Query: 303 FV 304
F+
Sbjct: 307 FL 308
emb|CAB61258.1| (AJ251005) putative thioredoxin reductase [Streptomyces coelicolor
A3(2)] >gi|6900903|emb|CAB71847.1| (AL138667) putative
thioredoxin reductase. [Streptomyces coelicolor A3(2)]
Length = 326
Score = 244 bits (616), Expect = 8e-64
Identities = 125/303 (41%), Positives = 188/303 (61%), Gaps = 4/303 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGV-PGGQMNNTAEIENYPGY-ETIMGPELS 64
DV++IGSGPAG TAA+YTAR+ + L+ + GG + T E+EN+PG+ + + GPEL
Sbjct: 9 DVIVIGSGPAGYTAALYTARASLNPLVFGGAIFVGGSLTTTTEVENFPGFPDGVQGPELM 68
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANHRKLEIPGE 123
M E G E + A++ GD K + T +++I+ATG+ +RKL +P E
Sbjct: 69 ENMRAQAERFGAEMVDDDIVAVDLTGDVKTVTDTAGTVHRARTVIVATGSGYRKLGVPKE 128
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+E RGVS+CA CDG FFR+++I+V+GGGD+A+EEA +LTRF +SVT++HRR LRA +
Sbjct: 129 DELSGRGVSWCATCDGFFFRDRDIVVVGGGDTAMEEATFLTRFARSVTVVHRRSALRASQ 188
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPV 243
++Q RAF E+KI+ +DS + ++ + + ++ TGE E A G+FI +G DP
Sbjct: 189 VMQNRAFSEDKISLAFDSEVATLHEENGMLSGMTLRDTLTGETRELATTGLFIAIGHDPR 248
Query: 244 AE-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
E F G L + E ++ RT++PG+F GDV +RQ TA G AA +A +
Sbjct: 249 TELFKGQLHLDSEGYLMVESPSTRTNVPGVFGAGDVVDHTYRQAITAASSGCAAALDAER 308
Query: 303 FVA 305
++A
Sbjct: 309 YLA 311
gb|AAD18463| (AE001616) Thioredoxin Reductase [Chlamydia pneumoniae]
Length = 311
Score = 243 bits (613), Expect = 2e-63
Identities = 132/306 (43%), Positives = 200/306 (65%), Gaps = 10/306 (3%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLE---RGVPGGQMNNTAEIENYPGY-ETIMGPEL 63
++IIGSGP+G TAA+Y +R+ + LL E G+ GGQ+ T E+EN+PG+ E I+GP+L
Sbjct: 6 LIIIGSGPSGYTAAIYASRALLHPLLFEGFFSGISGGQLMTTTEVENFPGFPEGILGPKL 65
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG- 122
M E G + + +++ + ++++ + + IIATGA+ ++LEIPG
Sbjct: 66 MNNMKEQAVRFGTKTLAQDIISVDFSVRPFILKSKEETYSCDACIIATGASAKRLEIPGA 125
Query: 123 -EEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL 179
+E+ +GV+ CAVCDGA F+N+++ VIGGGDSA+EEALYLTR+G V ++HRRDKL
Sbjct: 126 GNDEFWQKGVTACAVCDGASPIFKNKDLYVIGGGDSALEEALYLTRYGSHVYVVHRRDKL 185
Query: 180 RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVG 239
RA + ++ RA EKI F+W+S ++I G D V+SV KNV+T E+T + G+F +G
Sbjct: 186 RASKAMEARAQNNEKITFLWNSEIVKISG-DSIVRSVDIKNVQTQEITTREAAGVFFAIG 244
Query: 240 LDPVAEFAGNLGITDEAGWIITD-DHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
P +F G DE+G+I+T+ +TS+PG+FA GDV+ K +RQ T+ G G AA
Sbjct: 245 HKPNTDFLGGQLTLDESGYIVTEKGTSKTSVPGVFAAGDVQDKYYRQAVTSAGSGCIAAL 304
Query: 299 EAYKFV 304
+A +F+
Sbjct: 305 DAERFL 310
sp|O30973|TRXB_MYCSM THIOREDOXIN REDUCTASE >gi|2511764 (AF023161) thioredoxin reductase
[Mycobacterium smegmatis]
Length = 311
Score = 238 bits (601), Expect = 5e-62
Identities = 131/305 (42%), Positives = 190/305 (61%), Gaps = 3/305 (0%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMGPELS 64
+DV+IIGSGPAG TAA+Y AR+++K L+ E GG + T E+ENYPG+ E I GPEL
Sbjct: 8 HDVIIIGSGPAGYTAAIYAARAQLKPLVFEGTQFGGALMTTTEVENYPGFREGITGPELM 67
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEE 124
+M E + V A++ G K ++ D+ +++I+A GA R L +PGEE
Sbjct: 68 DQMREQALRFRADLRMEDVDAVQLEGPVKTVVVGDETHQARAVILAMGAAARHLGVPGEE 127
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
GVS CA CDG FFR+Q+I+V+GGGDSA+EEA +LTRF +SVT++HRRD+ RA +I
Sbjct: 128 ALTGMGVSTCATCDGFFFRDQDIVVVGGGDSAMEEATFLTRFARSVTLIHRRDEFRASKI 187
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+ +RA EKI F+ ++ +I+G D KV V ++ TGE ++ G+F+ +G DP +
Sbjct: 188 MLERARANEKITFLTNTEITQIEG-DPKVTGVRLRDTVTGEESKLDVTGVFVAIGHDPRS 246
Query: 245 EFA-GNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
E G + + DE + TSL G+FA GD+ +RQ TA G G A+ +A ++
Sbjct: 247 ELVRGQVELDDEGYVKVQGRTTYTSLDGVFAAGDLVDHTYRQAITAAGSGCAASIDAERW 306
Query: 304 VAELD 308
+AE D
Sbjct: 307 LAEQD 311
sp|P51978|TRXB_NEUCR THIOREDOXIN REDUCTASE >gi|757510|dbj|BAA08090| (D45049) Thioredoxin
Reductase (NADPH) [Neurospora crassa]
Length = 334
Score = 236 bits (596), Expect = 2e-61
Identities = 138/312 (44%), Positives = 191/312 (60%), Gaps = 13/312 (4%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLE----RGVP-GGQMNNTAEIENYPGY-ETIMGP 61
VVIIGSGPA TAA+Y AR+E+K +L E G+ GGQ+ T EIEN+PG+ + IMG
Sbjct: 5 VVIIGSGPAAHTAAIYLARAELKPVLYEGFMANGIAAGGQLTTTTEIENFPGFPDGIMGQ 64
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE---DDEFVTKSIIIATGANHRKL 118
EL KM E G + V ++ K TE ++ SII+ATGA+ R+L
Sbjct: 65 ELMDKMKAQSERFGTQIISETVAKVDLSARPFKYATEWSPEEYHTADSIILATGASARRL 124
Query: 119 EIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRR 176
+PGEE+Y G+S CAVCDGA FRN+ ++VIGGGDSA EEA+YLT++G VT++ R+
Sbjct: 125 HLPGEEKYWQNGISACAVCDGAVPIFRNKHLVVIGGGDSAAEEAMYLTKYGSHVTVLVRK 184
Query: 177 DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQS-VVYKNVKTGEVTEKAFGGIF 235
DKLRA I+ R EK+ +++V +E+KGDDK + S +V K+V TG+ G+F
Sbjct: 185 DKLRASSIMAHRLLNHEKVTVRFNTVGVEVKGDDKGLMSHLVVKDVTTGKEETLEANGLF 244
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIITDDHMR-TSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G DP TD G+++T TS+ G+FA GDV+ K +RQ T+ G G
Sbjct: 245 YAIGHDPATALVKGQLETDADGYVVTKPGTTLTSVEGVFAAGDVQDKRYRQAITSAGTGC 304
Query: 295 QAAQEAYKFVAE 306
AA +A KF++E
Sbjct: 305 MAALDAEKFLSE 316
emb|CAA65070| (X95798) thioredoxin [Mycobacterium tuberculosis]
Length = 335
Score = 235 bits (593), Expect = 4e-61
Identities = 126/303 (41%), Positives = 184/303 (60%), Gaps = 4/303 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGPELSM 65
DV++IGSGPAG TAA+Y AR+++ L+ E GG + T ++ENYPG+ I GPEL
Sbjct: 16 DVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMD 75
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE-FVTKSIIIATGANHRKLEIPGEE 124
+M E G + V ++ HG K ++T D + +++I+A GA R L++PGE+
Sbjct: 76 EMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGARARYLQVPGEQ 135
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
E RGVS CA CDG FFR+Q+I VIGGGDSA+EEA +LTRF +SVT++HRRD+ RA +I
Sbjct: 136 ELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKI 195
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+ RA +KI F+ + + G D V + Y++ TG T G+F+ +G +P +
Sbjct: 196 MLDRARNNDKIRFLTNHTVCAVDG-DTTVTGLRYRDTNTGAETTLPVTGVFVAIGHEPRS 254
Query: 245 EFAGNLGITDEAGWIITDDH-MRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
D G+++ TSLPG+FA GD+ + +RQ TA G G AA +A ++
Sbjct: 255 GLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERW 314
Query: 304 VAE 306
+AE
Sbjct: 315 LAE 317
gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase [Zymomonas mobilis]
Length = 318
Score = 233 bits (588), Expect = 2e-60
Identities = 128/305 (41%), Positives = 185/305 (59%), Gaps = 4/305 (1%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIMGPELSMK 66
V I+GSGPAG+TAA+Y AR+ + ++ + PGGQ+ T E+EN+PG+ E I GP L +
Sbjct: 10 VFILGSGPAGLTAAIYAARAGLNPIVAQGLQPGGQLTITTEVENFPGFREPIQGPWLMEE 69
Query: 67 MAEPLEGLGVENAYGFVTAIE-DHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEE 125
M E +G + + +T+++ Y+ + ++ S+II+TGA R L + E
Sbjct: 70 MQAQAENVGAKLVWDIITSVDFSQRPYRLMGDGGQVYLADSLIISTGAQARWLGLESETA 129
Query: 126 YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEII 185
+G+S CA CDG FFR ++++VIGGG++AVEEALYLT VT++HRRD LRA++I+
Sbjct: 130 LRGKGISACATCDGFFFRGKKVVVIGGGNTAVEEALYLTNHSPEVTLIHRRDSLRAEKIM 189
Query: 186 QQRAFKEEKINFIWDSVPME-IKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
Q+R KI W+S E I G+D + +V K+ KTGE + G FI +G P
Sbjct: 190 QKRLLANPKIKIRWNSEVAEFIAGEDSALSAVKLKDTKTGEESLLETEGAFIAIGHKPAT 249
Query: 245 E-FAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
E F G+L + DE +T +TS+ GIFA GDV K +RQ TA G G AA EA +F
Sbjct: 250 ELFQGHLKLDDEGYIEVTPGTTQTSIKGIFACGDVMDKHYRQAVTAAGTGCMAALEAERF 309
Query: 304 VAELD 308
+ E+D
Sbjct: 310 LGEID 314
sp|P52214|TRXB_MYCTU THIOREDOXIN REDUCTASE (TR) >gi|2808698|emb|CAA16226| (AL021426)
trxB2 [Mycobacterium tuberculosis]
Length = 335
Score = 232 bits (585), Expect = 3e-60
Identities = 125/303 (41%), Positives = 184/303 (60%), Gaps = 4/303 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGPELSM 65
DV++IGSGPAG TAA+Y AR+++ L+ E GG + T ++ENYPG+ I GPEL
Sbjct: 16 DVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMD 75
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE-FVTKSIIIATGANHRKLEIPGEE 124
+M E G + V ++ HG K ++T D + +++I+A GA R L++PGE+
Sbjct: 76 EMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQ 135
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
E RGVS CA CDG FFR+Q+I VIGGGDSA+EEA +LTRF +SVT++HRRD+ RA +I
Sbjct: 136 ELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKI 195
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+ RA +KI F+ + + + G D V + ++ TG T G+F+ +G +P +
Sbjct: 196 MLDRARNNDKIRFLTNHTVVAVDG-DTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRS 254
Query: 245 EFAGNLGITDEAGWIITDDH-MRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
D G+++ TSLPG+FA GD+ + +RQ TA G G AA +A ++
Sbjct: 255 GLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERW 314
Query: 304 VAE 306
+AE
Sbjct: 315 LAE 317
sp|P46843|TRXB_MYCLE BIFUNCTIONAL THIOREDOXIN REDUCTASE/THIOREDOXIN [INCLUDES:
THIOREDOXIN REDUCTASE ; THIOREDOXIN]
>gi|871419|emb|CAA61150| (X87899) thioredoxin
/thioredoxin reductase hybrid protein [Mycobacterium
leprae] >gi|886315 (L39923) thioredoxin
reductase/thioredoxin [Mycobacterium leprae]
Length = 458
Score = 232 bits (585), Expect = 3e-60
Identities = 127/307 (41%), Positives = 186/307 (60%), Gaps = 4/307 (1%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGP 61
E ++V++IGSGPAG TAA+Y AR+++ L+ E GG + T E+ENYPG+ I GP
Sbjct: 9 ETIHEVIVIGSGPAGYTAALYAARAQLTPLVFEGTSFGGALMTTTEVENYPGFRNGITGP 68
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIIT-EDDEFVTKSIIIATGANHRKLEI 120
EL M E G E V ++ G K ++T E + +++I+A G + R L+I
Sbjct: 69 ELMDDMREQALRFGAELRTEDVESVSLRGPIKSVVTAEGQTYQARAVILAMGTSVRYLQI 128
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE+E RGVS CA CDG+FFR Q+I VIGGGDSA+EEAL+LTRF +SVT++HRRD+ R
Sbjct: 129 PGEQELLGRGVSACATCDGSFFRGQDIAVIGGGDSAMEEALFLTRFARSVTLVHRRDEFR 188
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A +I+ RA +KI FI + + + G V + +N TGE T G+F+ +G
Sbjct: 189 ASKIMLGRARNNDKIKFITNHTVVAVNG-YTTVTGLRLRNTTTGEETTLVVTGVFVAIGH 247
Query: 241 DPVAEFAGNLGITDEAGWIITDDH-MRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQE 299
+P + ++ D G+++ TS+ G+FA GD+ + +RQ TA G G AA +
Sbjct: 248 EPRSSLVSDVVDIDPDGYVLVKGRTTSTSMDGVFAAGDLVDRTYRQAITAAGSGCAAAID 307
Query: 300 AYKFVAE 306
A +++AE
Sbjct: 308 AERWLAE 314
ref|NP_010640.1|TRR1| Thioredoxin reductase; Trr1p >gi|1717781|sp|P29509|TRB1_YEAST
THIOREDOXIN REDUCTASE 1 >gi|2117554|pir||S61150
thioredoxin reductase (NADPH) (EC 1.6.4.5) - yeast
(Saccharomyces cerevisiae) >gi|849175 (U28372) Similar
to Thioredoxin reductase (Swiss Prot. accession numbers
P09625 and Q05741), Alkyl hydroperoxide reductase F52A
protein (Swiss Prot. accession number P19480), NADH
Dehydrogenase (Swiss Prot. accession number P26829), and
other...
Length = 319
Score = 232 bits (585), Expect = 3e-60
Identities = 134/314 (42%), Positives = 190/314 (59%), Gaps = 13/314 (4%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLE----RGVP-GGQMNNTAEIENYPGY-ETIMGP 61
V IIGSGPA TAA+Y AR+E+K +L E G+ GGQ+ T EIEN+PG+ + + G
Sbjct: 6 VTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 65
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE----FVTKSIIIATGANHRK 117
EL +M E G E V+ ++ K+ TE +E T +II+ATGA+ ++
Sbjct: 66 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 125
Query: 118 LEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHR 175
+ +PGEE Y +G+S CAVCDGA FRN+ + VIGGGDSA EEA +LT++G V ++ R
Sbjct: 126 MHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVR 185
Query: 176 RDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIF 235
+D LRA I+Q+RA K EKI ++++V +E KGD K + ++ KN K E T+ G+F
Sbjct: 186 KDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLF 245
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G P + TDEAG+I T TS+PG FA GDV+ +RQ T+ G G
Sbjct: 246 YAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGC 305
Query: 295 QAAQEAYKFVAELD 308
AA +A K++ L+
Sbjct: 306 MAALDAEKYLTSLE 319
emb|CAB54874.1| (AL117188) thioredoxin reductase (NADPH) 2 [Arabidopsis thaliana]
Length = 333
Score = 225 bits (568), Expect = 3e-58
Identities = 128/313 (40%), Positives = 188/313 (59%), Gaps = 15/313 (4%)
Query: 10 IIGSGPAGMTAAMYTARSEMKTLLLERGV-----PGGQMNNTAEIENYPGY-ETIMGPEL 63
I+GSGPA TAA+Y AR+E+K LL E + PGGQ+ T ++EN+PG+ E I+G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ K + E G VT ++ K+ T+ + ++I+ATGA ++L G
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILATGAVAKRLSFVGS 132
Query: 124 EE----YGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
E + RG+S CAVCDGA FRN+ + VIGGGDSA+EEA +LT++G V I+HRRD
Sbjct: 133 GEASGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192
Query: 178 KLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK--VQSVVYKNVKTGEVTEKAFGGIF 235
RA +I+QQRA KI+ IW+S +E GD ++ + + KNV TG+V++ G+F
Sbjct: 193 AFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 252
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G +P +F D G+++T +TS+PG+FA GDV+ K +RQ TA G G
Sbjct: 253 FAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGC 312
Query: 295 QAAQEAYKFVAEL 307
AA +A ++ E+
Sbjct: 313 MAALDAEHYLQEI 325
pdb|1VDC| Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 223 bits (562), Expect = 2e-57
Identities = 127/313 (40%), Positives = 187/313 (59%), Gaps = 15/313 (4%)
Query: 10 IIGSGPAGMTAAMYTARSEMKTLLLERGV-----PGGQMNNTAEIENYPGY-ETIMGPEL 63
I+GSGPA TAA+Y AR+E+K LL E + PGGQ+ T ++EN+PG+ E I+G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ K + E G VT ++ K+ T+ + ++I+A GA ++L G
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFVGS 132
Query: 124 EE----YGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
E + RG+S CAVCDGA FRN+ + VIGGGDSA+EEA +LT++G V I+HRRD
Sbjct: 133 GEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192
Query: 178 KLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK--VQSVVYKNVKTGEVTEKAFGGIF 235
RA +I+QQRA KI+ IW+S +E GD ++ + + KNV TG+V++ G+F
Sbjct: 193 AFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 252
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G +P +F D G+++T +TS+PG+FA GDV+ K +RQ TA G G
Sbjct: 253 FAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGC 312
Query: 295 QAAQEAYKFVAEL 307
AA +A ++ E+
Sbjct: 313 MAALDAEHYLQEI 325
gb|AAC67690.1| (AE001284) Thioredoxin Reductase [Chlamydia trachomatis]
Length = 351
Score = 222 bits (561), Expect = 2e-57
Identities = 128/313 (40%), Positives = 192/313 (60%), Gaps = 12/313 (3%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLE---RGVPGGQMNNTAEIENYPGY-E 56
MT K +VIIGSGPAG TAA+Y +R+ + +L E G+ GGQ+ T E+EN+PG+ E
Sbjct: 40 MTHAK--LVIIGSGPAGYTAAIYASRALLTPVLFEGFFSGIAGGQLMTTTEVENFPGFPE 97
Query: 57 TIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHR 116
++G +L M + G + +TA++ + + + F + IIATGA+ +
Sbjct: 98 GVLGHQLMDLMKTQAQRFGTQVLSKDITAVDFSVRPFVLKSGKETFTCDACIIATGASAK 157
Query: 117 KLEIPG--EEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTI 172
+L IPG + E+ +GV+ CAVCDGA FR++++ V+GGGDSA+EEA++LTR+G+ V +
Sbjct: 158 RLSIPGAGDNEFWQKGVTACAVCDGASPIFRDKDLFVVGGGDSALEEAMFLTRYGKRVFV 217
Query: 173 MHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFG 232
+HRRD LRA +++ +A EKI F+W+S ++I GD +Y NV T +A
Sbjct: 218 VHRRDTLRASKVMVNKAQANEKIFFLWNSEIVKISGDTLVRSIDIYNNVDETTTTMEA-A 276
Query: 233 GIFIYVGLDPVAEFAGNLGITDEAGWIITD-DHMRTSLPGIFAVGDVRQKDFRQITTAIG 291
G+F +G P F G DE G+IIT+ RTS+PG+FA GDV+ K +RQ T+ G
Sbjct: 277 GVFFAIGHQPNTAFLGGQVALDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAG 336
Query: 292 DGAQAAQEAYKFV 304
G AA +A +F+
Sbjct: 337 SGCMAALDAERFL 349
gb|AAB86519.1| (AC002329) putative thioredoxin reductase [Arabidopsis thaliana]
Length = 383
Score = 222 bits (561), Expect = 2e-57
Identities = 128/322 (39%), Positives = 189/322 (57%), Gaps = 15/322 (4%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGV-----PGGQMNNTAEIENYPGY 55
M K V I+GSGPA TAA+Y +R+E+K LL E + PGGQ+ T ++EN+PG+
Sbjct: 54 METHKTKVCIVGSGPAAHTAAIYASRAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 113
Query: 56 -ETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGAN 114
E I+G ++ K + E G V ++ K+ T+ + S+II+TGA
Sbjct: 114 PEGILGIDIVEKFRKQSERFGTTIFTETVNKVDFSSKPFKLFTDSRTVLADSVIISTGAV 173
Query: 115 HRKLEIPGEEE----YGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQ 168
++L G E + RG+S CAVCDGA FRN+ ++VIGGGDSA+EEA +LT++G
Sbjct: 174 AKRLSFTGSGEGNGGFWNRGISACAVCDGAAPIFRNKPLVVIGGGDSAMEEANFLTKYGS 233
Query: 169 SVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDD--KKVQSVVYKNVKTGEV 226
V I+HRRD RA +I+QQRA KI IW+S +E GD+ + + + KNV TG+V
Sbjct: 234 KVYIIHRRDTFRASKIMQQRALSNPKIEVIWNSAVVEAYGDENGRVLGGLKVKNVVTGDV 293
Query: 227 TEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQ 285
++ G+F +G +P +F DE G+++T +TS+ G+FA GDV+ K +RQ
Sbjct: 294 SDLKVSGLFFAIGHEPATKFLDGQLELDEDGYVVTKPGTTKTSVVGVFAAGDVQDKKYRQ 353
Query: 286 ITTAIGDGAQAAQEAYKFVAEL 307
TA G G AA +A ++ E+
Sbjct: 354 AITAAGTGCMAALDAEHYLQEI 375
gi|2621795 (AE000850) thioredoxin reductase [Methanobacterium
thermoautotrophicum]
Length = 303
Score = 220 bits (555), Expect = 1e-56
Identities = 119/298 (39%), Positives = 179/298 (59%), Gaps = 5/298 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YD+++IG+GPAG+TA +Y R L+L++G GG +ENYPG+E I G L
Sbjct: 5 YDMIVIGAGPAGLTAGIYGGRQGSSVLMLDKGPAGGLGLEVPMMENYPGFEMIAGMSLVT 64
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEE 125
KM + + V IE GD + T D + +II ATG+ HR+L +PGE +
Sbjct: 65 KMKKQATAVAELREMEEVKEIEK-GDVFTVKTSRDTYTASAIIFATGSKHRQLGVPGEND 123
Query: 126 YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEII 185
RGV YCA CDG ++ +++L++GGG+SA +EA++L G V+I+HRRD+LRA + +
Sbjct: 124 LLGRGVCYCATCDGPLYKGRKVLMVGGGNSAAQEAVFLKNIGCDVSIVHRRDELRADKYL 183
Query: 186 QQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAE 245
Q + +E +I IW+SV EI G D++V+ V+ N TG G+FI +G +P+ +
Sbjct: 184 QDK-LREMEIPVIWNSVVKEI-GGDERVEEVIIHNRVTGRDETLKVDGVFIAIGEEPLNQ 241
Query: 246 FAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
A +LG+ D+ G+IITD RT++P ++A GD+ Q TA +GA AA AY+
Sbjct: 242 LAVDLGVEVDKGGYIITDKFQRTNVPLVYAAGDI-TGGLNQWVTACAEGAIAATYAYR 298
sp|Q92375|TRXB_SCHPO THIOREDOXIN REDUCTASE >gi|1498486 (U63713) thioredoxin reductase
[Schizosaccharomyces pombe] >gi|2924500|emb|CAA17692.1|
(AL022019) thioredoxin reductase [Schizosaccharomyces
pombe]
Length = 322
Score = 217 bits (548), Expect = 8e-56
Identities = 130/321 (40%), Positives = 185/321 (57%), Gaps = 15/321 (4%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLE----RGVP-GGQMNNTAEIENYPGY 55
MT K VVIIGSGPAG TAA+Y AR E+K ++ E G+ GGQ+ T ++EN+PG+
Sbjct: 1 MTHNK--VVIIGSGPAGHTAAIYLARGELKPVMYEGMLANGIAAGGQLTTTTDVENFPGF 58
Query: 56 -ETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKI----ITEDDEFVTKSIIIA 110
+ I G L+ G E V+ ++ K E++ S+I+A
Sbjct: 59 PDGINGTTLTENFRAQSLRFGTEIITETVSKLDLSSRPFKYWLEGAEEEEPHTADSVILA 118
Query: 111 TGANHRKLEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQ 168
TGA+ R+L I GE+ Y G+S CAVCDGA +RN+ + V+GGGDSA EEA +LT++G
Sbjct: 119 TGASARRLHITGEDTYWQAGISACAVCDGAVPIYRNKPLAVVGGGDSAAEEAQFLTKYGS 178
Query: 169 SVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTE 228
V ++ RRDKLRA I+ +R K+ +W++V E +GD K + ++ KN T EV++
Sbjct: 179 KVYVLVRRDKLRASPIMAKRLLANPKVEVLWNTVAEEAQGDGKLLNNLRIKNTNTNEVSD 238
Query: 229 KAFGGIFIYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQIT 287
G+F +G P + DEAG+I T + RTS+PG FA GDV+ K FRQ
Sbjct: 239 LQVNGLFYAIGHIPATKLVAEQIELDEAGYIKTINGTPRTSIPGFFAAGDVQDKVFRQAI 298
Query: 288 TAIGDGAQAAQEAYKFVAELD 308
T+ G G QAA A ++ EL+
Sbjct: 299 TSAGSGCQAALLAMHYLEELE 319
gb|AAF30479.1|AE002107_3 (AE002107) thioredoxin reductase [Ureaplasma urealyticum]
Length = 309
Score = 216 bits (544), Expect = 2e-55
Identities = 118/305 (38%), Positives = 182/305 (58%), Gaps = 2/305 (0%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
M ++ YD+VIIG+GPAG+ AA+Y RS + +++E+ PGG++ T+ +ENY G +I G
Sbjct: 1 MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPG 60
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
PEL+ KM E + L V Y I YKKI +TK++IIATG +R+L I
Sbjct: 61 PELAYKMYEQVLNLNVSIIYEAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNI 120
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
GE E+ +G+SYCA+CDG ++N+ + VIG G+SAVEEA+YL + V ++ + + +
Sbjct: 121 LGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEAIYLATIAKEVHLIANKPQFK 180
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A++ + Q A I ++ E G + ++ + ++++ T EVT F ++GL
Sbjct: 181 AEQQLVQIANNTPNIKIYYNKQTFEFFG-HQFLEGLKFRDLITNEVTTLNIEANFTFIGL 239
Query: 241 DPVAEFAGNLGITDEA-GWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQE 299
P NL I +E G+I TD +M+TS+ GIFA GD+ K+ RQI TA DG AA
Sbjct: 240 LPSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALY 299
Query: 300 AYKFV 304
A +++
Sbjct: 300 AKEYI 304
pir||S44027 thioredoxin reductase (NADPH) (EC 1.6.4.5) B - Arabidopsis thaliana
Length = 333
Score = 216 bits (544), Expect = 2e-55
Identities = 126/313 (40%), Positives = 184/313 (58%), Gaps = 15/313 (4%)
Query: 10 IIGSGPAGMTAAMYTARSEMKTLLLERGV-----PGGQMNNTAEIENYPGY-ETIMGPEL 63
I+GSGPA TAA+Y AR+E+K LL E + PGGQ+ T ++EN+PG+ E I+G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ K + E G VT ++ K+ T+ + ++I+A GA + L G
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKWLSFVGS 132
Query: 124 EEYGA----RGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
E RG+S CAVCDGA FRN+ + VIGGGDSA+EEA +LT++G V I+ RRD
Sbjct: 133 GEVLGGLWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIDRRD 192
Query: 178 KLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK--VQSVVYKNVKTGEVTEKAFGGIF 235
RA +I+QQRA KI+ IW+S +E GD ++ + + KNV TG+V++ G+F
Sbjct: 193 AFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 252
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G +P +F D G+++T +TS+PG+FA GDV+ K +RQ TA G G
Sbjct: 253 FAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGC 312
Query: 295 QAAQEAYKFVAEL 307
AA +A ++ E+
Sbjct: 313 MAALDAEHYLQEI 325
dbj|BAA80046.1| (AP000060) 343aa long hypothetical thioredoxin reductase [Aeropyrum
pernix]
Length = 343
Score = 215 bits (543), Expect = 3e-55
Identities = 127/310 (40%), Positives = 179/310 (56%), Gaps = 9/310 (2%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPEL 63
++YD VI+G+GPAG++AA+YT R M TL++ V GGQ+N T I++YPG + +L
Sbjct: 23 EEYDTVIVGAGPAGLSAAIYTTRFLMSTLIVSMDV-GGQLNLTNWIDDYPGMGGLEASKL 81
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDD---EFVTKSIIIATGANHRKLEI 120
E G + G D D + E +++I+A G+ RKL +
Sbjct: 82 VESFKSHAEMFGAKIVTGVQVKTVDRLDDGWFLVRGSRGLEVKARTVILAVGSRRRKLGV 141
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQE-ILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL 179
PGE E RGVSYC+VCD F+ ++ ++V+GGGDSA+E AL L+ + V ++HRR
Sbjct: 142 PGEAELAGRGVSYCSVCDAPLFKGKDAVVVVGGGDSALEGALLLSGYVGKVYLVHRRQGF 201
Query: 180 RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVG 239
RA+ + A K+ I FI DS+ EI+G D +V+SVV KN TGE E GIFI +G
Sbjct: 202 RAKPFYVEEARKKPNIEFILDSIVTEIRGRD-RVESVVVKNKVTGEEKELRVDGIFIEIG 260
Query: 240 LDPVAEFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQ--KDFRQITTAIGDGAQA 296
+P E +G+ TD G ++ D+ MRTS+PGIFA GD FRQ+ TA GA A
Sbjct: 261 SEPPKELFEAIGLETDSMGNVVVDEWMRTSIPGIFAAGDCTSMWPGFRQVVTAAAMGAVA 320
Query: 297 AQEAYKFVAE 306
A AY ++ E
Sbjct: 321 AYSAYTYLQE 330
gi|4155329 (AE001507) THIOREDOXIN REDUCTASE [Helicobacter pylori J99]
Length = 311
Score = 215 bits (542), Expect = 4e-55
Identities = 122/306 (39%), Positives = 172/306 (55%), Gaps = 8/306 (2%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKT-LLLERGVPGGQMNNTAEIENYPGY-ETIMGPELS 64
D IIG GPAG++A +Y R +K +L E+G+PGGQ+ ++EIENYPG E + G +
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFM 62
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE-FVTKSIIIATGANHRKLEIPGE 123
E G+++ + + G + I+ ED + F KS+IIATG + ++ I GE
Sbjct: 63 QPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGE 122
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
EY +GVS CA CDG F++N+E+ V+GGGD+AVEEA+YL + V ++HRRD R
Sbjct: 123 SEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAP 182
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP- 242
I + A KI F+ V EIKGD V S+ KN T E E G+FI+VG D
Sbjct: 183 ITLEHAKNNSKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGLFIFVGYDVN 242
Query: 243 ----VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
E L DE G I+ D M+T++ G+FA GD+R +Q+ A DGA AA
Sbjct: 243 NAVLKQEDNSMLCECDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAAL 302
Query: 299 EAYKFV 304
++
Sbjct: 303 SVISYL 308
gi|2649006 (AE000995) thioredoxin reductase (trxB) [Archaeoglobus fulgidus]
Length = 300
Score = 213 bits (537), Expect = 1e-54
Identities = 121/300 (40%), Positives = 172/300 (57%), Gaps = 4/300 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDV IIG GPAG+TAA+Y+AR +KT+ E P Q++ A+IENYPG+E G EL
Sbjct: 2 YDVAIIGGGPAGLTAALYSARYGLKTVFFETVDPVSQLSLAAKIENYPGFEG-SGMELLE 60
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEE 125
KM E G E V +E +G+ +I E E+ K+II+ATG H++ I GE
Sbjct: 61 KMKEQAVKAGAEWKLEKVERVERNGETFTVIAEGGEYEAKAIIVATGGKHKEAGIEGESA 120
Query: 126 YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEII 185
+ RGVSYCA CDG FFR ++++V G G A+E+A+YL G VTI+ R RA++ +
Sbjct: 121 FIGRGVSYCATCDGNFFRGKKVIVYGSGKEAIEDAIYLHDIGCEVTIVSRTPSFRAEKAL 180
Query: 186 QQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAE 245
+ ++ I + + +I G KV+ VV N + E E GIF+ +G+ P +
Sbjct: 181 VEEV-EKRGIPVHYSTTIRKIIGSG-KVEKVVAYNREKKEEFEIEADGIFVAIGMRPATD 238
Query: 246 FAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
LG+ D G+I D RT++ G+FA GD +Q+ TA GDGA AA AYK++
Sbjct: 239 VVAELGVERDSMGYIKVDKEQRTNVEGVFAAGDCCDNPLKQVVTACGDGAVAAYSAYKYL 298
sp|P56431|TRXB_HELPY THIOREDOXIN REDUCTASE >gi|2313959|gb|AAD07875.1| (AE000594)
thioredoxin reductase (trxB) [Helicobacter pylori 26695]
Length = 311
Score = 213 bits (536), Expect = 2e-54
Identities = 122/306 (39%), Positives = 171/306 (55%), Gaps = 8/306 (2%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKT-LLLERGVPGGQMNNTAEIENYPGY-ETIMGPELS 64
D IIG GPAG++A +Y R +K +L E+G+PGGQ+ ++EIENYPG E + G +
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFM 62
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE-FVTKSIIIATGANHRKLEIPGE 123
E G+++ V + + I+ ED + F KS+IIATG + ++ I GE
Sbjct: 63 QPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGE 122
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
EY +GVS CA CDG F++N+E+ V+GGGD+AVEEA+YL + V ++HRRD R
Sbjct: 123 SEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAP 182
Query: 184 IIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP- 242
I + A +KI F+ V EIKGD V S+ KN T E E G FI+VG D
Sbjct: 183 ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVN 242
Query: 243 ----VAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
E L DE G I+ D M+T++ G+FA GD+R +Q+ A DGA AA
Sbjct: 243 NAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAAL 302
Query: 299 EAYKFV 304
++
Sbjct: 303 SVISYL 308
gi|520501 (U10274) thioredoxin reductase [Saccharomyces cerevisiae]
Length = 319
Score = 210 bits (530), Expect = 1e-53
Identities = 124/314 (39%), Positives = 180/314 (56%), Gaps = 13/314 (4%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLE----RGVP-GGQMNNTAEIENYPGY-ETIMGP 61
V IIGSGPA T A+Y AR+E+K +L E G+ GGQ+ T EIEN+PG+ + + G
Sbjct: 6 VTIIGSGPAAHTVAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 65
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE----FVTKSIIIATGANHRK 117
EL +M E G E V+ ++ K+ E +E T +II+ATGA+ ++
Sbjct: 66 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWAEFNEDAEPVATDAIILATGASAKR 125
Query: 118 LEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHR 175
+ +PGEE Y +G+S CAVCDGA FRN+ + VIGGGDSA EEA +LT++G +
Sbjct: 126 MHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKCLCLSE 185
Query: 176 RDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIF 235
+ + ++RA K EKI ++++V +E KGD K + ++ KN K E T+ G+F
Sbjct: 186 KTICVLLPLCKKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLF 245
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G P + TDEAG+I T TS+PG FA GDV+ +RQ T+ G G
Sbjct: 246 YAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGC 305
Query: 295 QAAQEAYKFVAELD 308
AA +A K++ L+
Sbjct: 306 MAALDAEKYLTSLE 319
sp|Q39243|TRB1_ARATH THIOREDOXIN REDUCTASE 1 (NADPH-DEPENDENT THIOREDOXIN REDUCTASE 1)
(NTR 1) >gi|468526|emb|CAA80656| (Z23109) Thioredoxin
reductase [Arabidopsis thaliana]
Length = 332
Score = 209 bits (526), Expect = 3e-53
Identities = 126/313 (40%), Positives = 182/313 (57%), Gaps = 16/313 (5%)
Query: 10 IIGSGPAGMTAAMYTARSEMKTLLLERGV-----PGGQMNNTAEIENYPGY-ETIMGPEL 63
I+GSGPA TAA+Y AR+E+K LL E + PGGQ+N EN+PG+ E I+G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLNQPPR-ENFPGFPEGILGVEL 71
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ K + E G VT ++ K+ T+ + ++I+A GA + L G
Sbjct: 72 TDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKWLSFVGS 131
Query: 124 EEYGA----RGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
E RG+S CAVCDGA FRN+ + VIGGGDSA+EEA +LT++G V I+ RRD
Sbjct: 132 GEVLGGLWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIDRRD 191
Query: 178 KLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK--VQSVVYKNVKTGEVTEKAFGGIF 235
RA +I+QQRA KI+ IW+S +E GD ++ + + KNV TG+V++ G+F
Sbjct: 192 AFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 251
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
+G +P +F D G+++T +TS+PG+FA GDV+ K +RQ TA G G
Sbjct: 252 FAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGC 311
Query: 295 QAAQEAYKFVAEL 307
AA +A ++ E+
Sbjct: 312 MAALDAEHYLQEI 324
gb|AAB84351.1| (AC002510) putative thioredoxin reductase [Arabidopsis thaliana]
Length = 535
Score = 207 bits (521), Expect = 1e-52
Identities = 117/307 (38%), Positives = 183/307 (59%), Gaps = 9/307 (2%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLER----GVPGGQMNNTAEIENYPGY-ETIMGP 61
+VVIIGSGPAG TAA+Y AR+ +K ++ E GVPGGQ+ T E+EN+PG+ + I GP
Sbjct: 85 NVVIIGSGPAGYTAAIYAARANLKPVVFEGYQMGGVPGGQLMTTTEVENFPGFPDGITGP 144
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
+L KM + E G E V ++ + T + + SII ATGA R+L +P
Sbjct: 145 DLMEKMRKQAERWGAELYPEDVESLSVTTAPFTVQTSERKVKCHSIIYATGATARRLRLP 204
Query: 122 GEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL 179
EEE+ +RG+S CA+CDGA F+ Q + V+GGGD+A EEALYLT++ + V ++ RRD+L
Sbjct: 205 REEEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEALYLTKYARHVHLLVRRDQL 264
Query: 180 RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVKTGEVTEKAFGGIFIYV 238
RA + +Q R I +++ +++ + K ++ ++ + + TGE TE G+F +
Sbjct: 265 RASKAMQDRVINNPNITVHYNTETVDVLSNTKGQMSGILLRRLDTGEETELEAKGLFYGI 324
Query: 239 GLDPVAEFAGNLGITDEAGWI-ITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAA 297
G P ++ D +G++ + + TS+ G+FA GDV+ ++RQ TA G G AA
Sbjct: 325 GHSPNSQLLEGQVELDSSGYVLVREGTSNTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAA 384
Query: 298 QEAYKFV 304
A +++
Sbjct: 385 LSAERYL 391
sp|P43788|TRXB_HAEIN THIOREDOXIN REDUCTASE >gi|1075348|pir||G64186 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Haemophilus influenzae (strain Rd
KW20) >gi|1574715 (U32795) thioredoxin reductase (trxB)
[Haemophilus influenzae Rd]
Length = 318
Score = 206 bits (520), Expect = 1e-52
Identities = 120/311 (38%), Positives = 176/311 (56%), Gaps = 12/311 (3%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMGPE 62
K ++I+GSGPAG TAA+Y AR+ +K +L+ GGQ+ T EIEN+PG +E G
Sbjct: 5 KHAKLLILGSGPAGYTAAIYAARANLKPVLVTGLQQGGQLTTTDEIENWPGDFEMTTGSG 64
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG 122
L +M + E E + + ++ K+ + F ++IIATGA+ R + +P
Sbjct: 65 LMQRMLQHAEKFETEIVFDHINRVDLSSRPFKLFGDVQNFTCDALIIATGASARYIGLPS 124
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
EE Y RGVS CA CDG F+RN+ + VIGGG++AVEEALYL +V ++HRRD RA+
Sbjct: 125 EENYKGRGVSACATCDGFFYRNKPVGVIGGGNTAVEEALYLANIASTVHLIHRRDSFRAE 184
Query: 183 EIIQQRAFK---EEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVG 239
+I+ R +K E KI D E+ GD+ V + N KTGE E G+F+ +G
Sbjct: 185 KILIDRLYKKVEEGKIVLHTDRTLDEVLGDNMGVTGLRLANTKTGEKEELKLDGLFVAIG 244
Query: 240 LDPVAE-FAGNLGITDEAGWIITDDHM-----RTSLPGIFAVGDVRQKDFRQITTAIGDG 293
P E F G L + + G+I+ + TS+ G+FA GDV ++RQ T+ G G
Sbjct: 245 HSPNTEIFQGQLELNN--GYIVVKSGLDGNATATSVEGVFAAGDVMDHNYRQAITSAGTG 302
Query: 294 AQAAQEAYKFV 304
AA +A +++
Sbjct: 303 CMAALDAERYL 313
ref|NP_011974.1|TRR2| mitochondrial thioredoxin reductase; Trr2p
>gi|731695|sp|P38816|TRB2_YEAST THIOREDOXIN REDUCTASE 2,
MITOCHONDRIAL PRECURSOR >gi|630122|pir||S48948 peroxide
reductase homolog - yeast (Saccharomyces cerevisiae)
>gi|529123 (U00059) Yhr106wp [Saccharomyces cerevisiae]
Length = 342
Score = 203 bits (511), Expect = 2e-51
Identities = 121/313 (38%), Positives = 180/313 (56%), Gaps = 13/313 (4%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLE----RGVP-GGQMNNTAEIENYPGY-ETIM 59
+ V IIGSGPA TAA+Y AR+EMK L E G+ GGQ+ T +IEN+PG+ E++
Sbjct: 27 HKVTIIGSGPAAHTAAIYLARAEMKPTLYEGMMANGIAAGGQLTTTTDIENFPGFPESLS 86
Query: 60 GPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE----FVTKSIIIATGANH 115
G EL +M + G V+ ++ ++ TE +E T +II+ATGA+
Sbjct: 87 GSELMERMRKQSAKFGTNIITETVSKVDLSSKPFRLWTEFNEDAEPVTTDAIILATGASA 146
Query: 116 RKLEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIM 173
+++ +PGEE Y +G+S CAVCDGA FRN+ + VIGGGDSA EEA +LT++ V I+
Sbjct: 147 KRMHLPGEETYWQQGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAEFLTKYASKVYIL 206
Query: 174 HRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGG 233
R+D RA I+Q+R K I ++++V +E KGD K + + KN K+ + G
Sbjct: 207 VRKDHFRASVIMQRRIEKNPNIIVLFNTVALEAKGDGKLLNMLRIKNTKSNVENDLEVNG 266
Query: 234 IFIYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTSLPGIFAVGDVRQKDFRQITTAIGD 292
+F +G P + +E G+I T TS+PG FA GDV+ +RQ T+ G
Sbjct: 267 LFYAIGHSPATDIVKGQVDEEETGYIKTVPGSSLTSVPGFFAAGDVQDSRYRQAVTSAGS 326
Query: 293 GAQAAQEAYKFVA 305
G AA +A ++++
Sbjct: 327 GCIAALDAERYLS 339
sp|P43496|TRXB_PENCH THIOREDOXIN REDUCTASE >gi|1078637|pir||B49888 72k broad-range
disulfide reductase (NADPH) (EC 1.-.-.-) - Penicillium
chrysogenum >gi|4379348|emb|CAA53725| (X76119)
thioredoxin reductase [Penicillium chrysogenum]
Length = 334
Score = 201 bits (506), Expect = 6e-51
Identities = 129/322 (40%), Positives = 182/322 (56%), Gaps = 23/322 (7%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-----GGQMNNTAEIENYPGYET-IMGP 61
VVIIGSG TAA+Y +R+E++ +L E + GGQ+ T ++EN+PG+ + I G
Sbjct: 6 VVIIGSGAGAHTAAIYLSRAELQPVLYEGMLANGTAAGGQLTTTTDVENFPGFPSGIGGA 65
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE--DDEF-----VTKSIIIATGAN 114
EL M E G E ++ ++ K+ TE DDE ++IIATGAN
Sbjct: 66 ELMDNMRAQSERFGTEIITETISKLDLSSRPFKMWTEWNDDEGSEPVRTADAVIIATGAN 125
Query: 115 HRKLEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTI 172
R+L +PGEE Y G+S CAVCDGA FRN+ + VIGGGDSA EEA++L ++G SVT+
Sbjct: 126 ARRLNLPGEETYWQNGISACAVCDGAVPIFRNKPLYVIGGGDSAAEEAMFLAKYGSSVTV 185
Query: 173 MHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVK-----TGEVT 227
+ R+DKLRA I+ R K +++V E+ G++K + + VK EV
Sbjct: 186 LVRKDKLRASNIMADRLLAHPKCKVRFNTVATEVIGENKPNGLMTHLRVKDVLSNAEEVV 245
Query: 228 EKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMR-TSLPGIFAVGDVRQKDFRQI 286
E G+F VG DP + D+ G+IIT T++ G+FA GDV+ K +RQ
Sbjct: 246 EA--NGLFYAVGHDPASGLVKGQVELDDEGYIITKPGTSFTNVEGVFACGDVQDKRYRQA 303
Query: 287 TTAIGDGAQAAQEAYKFVAELD 308
T+ G G AA EA KF+AE +
Sbjct: 304 ITSAGSGCVAALEAEKFIAETE 325
sp|P75531|TRXB_MYCPN THIOREDOXIN REDUCTASE >gi|2146661|pir||S73917 thioredoxin reductase
trxB - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1674293 (AE000058) Mycoplasma pneumoniae,
thioredoxin reductase; similar to GenBank Accession
Number S38988, from E. acidaminophilum [Mycoplasma
pneumoniae] >gi|2231181 (U51988) thioredoxin reductase
K04_orf315 [Mycoplasma pneumoniae]
Length = 315
Score = 197 bits (495), Expect = 1e-49
Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 3/290 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDV I+G+GPAG+ A +Y R+ + ++E PGG++ T +ENYPGY++I GP+L +
Sbjct: 16 YDVAIVGAGPAGIAAGIYGKRANLNLAIIEGSTPGGKVVKTNIVENYPGYKSITGPDLGL 75
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEIPGEE 124
+M L L Y + ++ D + +D V K++I ATG RKL + E+
Sbjct: 76 EMYNHLIDLEPTFFYANLIKLDKAADTFILYLDDKTVVFAKTVIYATGMLERKLGVAKED 135
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
+ +G+SYCA+CDG+ +++Q + V+GGG+SA++EALYL ++V ++HRR+ RA E
Sbjct: 136 HFYGKGISYCAICDGSLYKDQVVGVVGGGNSAIQEALYLASMAKTVHLIHRREGFRADET 195
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+ + F + E+ G++ + +V +N + +F Y+G + +
Sbjct: 196 ALNKLRNLPNVVFHLNYTVKELLGNN-TLNGIVLQNTLDHSTKQIDLNCVFPYIGFESIT 254
Query: 245 EFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDG 293
+ +L + D G++IT++ M TSL G+FA GD R K FRQI TAI DG
Sbjct: 255 KPVEHLNLKLDPQGFLITNEQMETSLKGLFAAGDCRSKHFRQIGTAINDG 304
gi|2983154 (AE000693) thioredoxin reductase [Aquifex aeolicus]
Length = 323
Score = 195 bits (491), Expect = 4e-49
Identities = 119/306 (38%), Positives = 171/306 (54%), Gaps = 4/306 (1%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYE-TIMGP 61
+K YDV+IIG+GPAG TAA+YTAR+ KTL+L R G + T +IENYPG + G
Sbjct: 10 DKVYDVIIIGAGPAGTTAAIYTARAGWKTLVLYRAEADGALGVTQKIENYPGVPGPLSGY 69
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDD-EFVTKSIIIATGANHRKLEI 120
EL M E + G E G V A + + D KK+ T D EF K+II+A+GA R +
Sbjct: 70 ELLKIMREQAKSFGAEFVRGKVIATDLNSDPKKVYTIDGREFRGKTIIVASGAMERANKF 129
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
GEEE+ RGVSYC VCD AFF++Q + VIG D A+EEA ++ RF V + K++
Sbjct: 130 KGEEEFLGRGVSYCGVCDAAFFKDQPVAVIGDDDYAIEEAEFIARFANKVFFVVPGSKIK 189
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYV-G 239
A + + K + + P+EI G D+ V+ + K+++ E G+FI++ G
Sbjct: 190 APPEVIEHFEKLPNVEILLRHRPIEIVG-DQVVKGIKLKDLEKKEEKLLEVNGVFIFLGG 248
Query: 240 LDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQE 299
P +F E I+ ++ M TS+PG+FA GDV + +Q A G +AA
Sbjct: 249 TKPSVDFLMGQVEMTEGDCIVVNEEMMTSVPGVFAAGDVLCNEVKQAVVAAAMGCKAALA 308
Query: 300 AYKFVA 305
KF++
Sbjct: 309 VDKFLS 314
sp|P47348|TRXB_MYCGE THIOREDOXIN REDUCTASE >gi|1361862|pir||C64211 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Mycoplasma genitalium (SGC3)
>gi|3844690 (U39690) thioredoxin reductase (trxB)
[Mycoplasma genitalium]
Length = 315
Score = 194 bits (488), Expect = 8e-49
Identities = 103/296 (34%), Positives = 176/296 (58%), Gaps = 9/296 (3%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YD+VI+G+GPAG+ +A+Y R+ + ++E PGG++ T +ENYPG++TI GPEL +
Sbjct: 16 YDLVIVGAGPAGIASAIYGKRANLNLAIIEGNTPGGKIVKTNIVENYPGFKTITGPELGL 75
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEIPGEE 124
+M L Y + I+ D + ++ V +K++I ATG RKL I E+
Sbjct: 76 EMYNHLLAFEPVVFYNNLIKIDHLNDTFILYLDNKTTVFSKTVIYATGMEERKLGIEKED 135
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
+ +G+SYCA+CD A ++ + + V+GGG+SA++EA+YL+ ++V ++HRR+ R+ +
Sbjct: 136 YFYGKGISYCAICDAALYKGKTVGVVGGGNSAIQEAIYLSSIAKTVHLIHRREVFRSDAL 195
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLD--- 241
+ ++ K + F ++ ++ G + K+Q+V + +E A +F Y+G +
Sbjct: 196 LVEKLKKISNVVFHLNATVKQLIGQE-KLQTVKLASTVDKSESEIAIDCLFPYIGFESNN 254
Query: 242 -PVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQA 296
PV + NL D+ G+I+ D++M+T++ G + GD R K FRQI TAI DG A
Sbjct: 255 KPVLDLKLNL---DQNGFILGDENMQTNIKGFYVAGDCRSKSFRQIATAISDGVTA 307
emb|CAB72630.1| (AL139074) thioredoxin reductase [Campylobacter jejuni]
Length = 312
Score = 194 bits (487), Expect = 1e-48
Identities = 113/310 (36%), Positives = 173/310 (55%), Gaps = 10/310 (3%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLL-ERGVPGGQMNNTAEIENYPGYETIM-GPELS 64
DV IIG GPAG++A +Y R +K +++ E+G+PGGQ+ +++EIENYPG +M G
Sbjct: 3 DVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFM 62
Query: 65 MKMAEPLEGLGVENAYGFVTAI--EDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG 122
+E G+++ V I G + + + K++I+ TG+ +K G
Sbjct: 63 APWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKG 122
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ 182
E+E+ +GVS CA CDG F++N+E+ V+GGGD+A+EEALYL + ++HRRD+ RA
Sbjct: 123 EDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA 182
Query: 183 EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP 242
++ K EKI I + E+ GD V V K +K G + + GIF +VGL+
Sbjct: 183 PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNV 241
Query: 243 VAEFAGN-----LGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAA 297
E L +E G + D M+TS+ G+FA GD+R+ +Q+ A GDGA AA
Sbjct: 242 RNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAA 301
Query: 298 QEAYKFVAEL 307
A ++ L
Sbjct: 302 LSAMAYIESL 311
sp|Q39242|TRB2_ARATH THIOREDOXIN REDUCTASE 2 (NADPH-DEPENDENT THIOREDOXIN REDUCTASE 2)
(NTR 2) >gi|1076358|pir||S44026 thioredoxin reductase
(NADPH) (EC 1.6.4.5) A - Arabidopsis thaliana (fragment)
>gi|468524|emb|CAA80655| (Z23108) NADPH thioredoxin
reductase [Arabidopsis thaliana]
Length = 302
Score = 194 bits (487), Expect = 1e-48
Identities = 109/279 (39%), Positives = 163/279 (58%), Gaps = 10/279 (3%)
Query: 39 PGGQMNNTAEIENYPGY-ETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIIT 97
PGGQ+ T ++EN+PG+ E I+G ++ K + E G V ++ K+ T
Sbjct: 16 PGGQLTTTTDVENFPGFPEGILGIDIVEKFRKQSERFGTTIFTETVNKVDFSSKPFKLFT 75
Query: 98 EDDEFVTKSIIIATGANHRKLEIPGEEE----YGARGVSYCAVCDGA--FFRNQEILVIG 151
+ + S+II+TGA ++L G E + RG+S CAVCDGA FRN+ ++VIG
Sbjct: 76 DSRTVLADSVIISTGAVAKRLSFTGSGEGNGGFWNRGISACAVCDGAAPIFRNKPLVVIG 135
Query: 152 GGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDD- 210
GGDSA+EEA +LT++G V I+HRRD RA +I+QQRA KI IW+S +E GD+
Sbjct: 136 GGDSAMEEANFLTKYGSKVYIIHRRDTFRASKIMQQRALSNPKIEVIWNSAVVEAYGDEN 195
Query: 211 -KKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIIT-DDHMRTS 268
+ + + KNV TG+V++ G+F +G P +F DE G+++T +TS
Sbjct: 196 GRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHQPATKFLDGQLELDEDGYVVTKPGTTKTS 255
Query: 269 LPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAEL 307
+ G+FA GDV+ K +RQ TA G G AA +A ++ E+
Sbjct: 256 VVGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEI 294
pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli.
Length = 320
Score = 192 bits (482), Expect = 4e-48
Identities = 117/314 (37%), Positives = 178/314 (56%), Gaps = 13/314 (4%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P L +M E E + + ++ ++ ++ E+ ++IIATGA+ R L +
Sbjct: 62 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 121
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
P EE + RGVS CA CDG F+RNQ++ VIGGG++AVEEALYL+ V ++HRRD R
Sbjct: 122 PSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 181 AQEIIQQRAF-KEEKINFI--WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA-FGGIFI 236
A++I+ +R K E N I + E+ GD V V ++ + + E G+F+
Sbjct: 182 AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241
Query: 237 YVGLDP-VAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAI 290
+G P A F G L + E G+I I + +TS+PG+FA GDV +RQ T+
Sbjct: 242 AIGHSPNTAIFEGQLEL--ENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 291 GDGAQAAQEAYKFV 304
G G AA +A +++
Sbjct: 300 GTGCMAALDAERYL 313
pdb|1TDE| Thioredoxin Reductase (E.C.1.6.4.5) (Wild Type)
Length = 316
Score = 192 bits (482), Expect = 4e-48
Identities = 117/314 (37%), Positives = 178/314 (56%), Gaps = 13/314 (4%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P L +M E E + + ++ ++ ++ E+ ++IIATGA+ R L +
Sbjct: 62 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 121
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
P EE + RGVS CA CDG F+RNQ++ VIGGG++AVEEALYL+ V ++HRRD R
Sbjct: 122 PSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 181 AQEIIQQRAF-KEEKINFI--WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA-FGGIFI 236
A++I+ +R K E N I + E+ GD V V ++ + + E G+F+
Sbjct: 182 AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241
Query: 237 YVGLDP-VAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAI 290
+G P A F G L + E G+I I + +TS+PG+FA GDV +RQ T+
Sbjct: 242 AIGHSPNTAIFEGQLEL--ENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 291 GDGAQAAQEAYKFV 304
G G AA +A +++
Sbjct: 300 GTGCMAALDAERYL 313
sp|P09625|TRXB_ECOLI THIOREDOXIN REDUCTASE >gi|66129|pir||RDECT thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Escherichia coli >gi|148073
(J03762) thioredoxin reductase [Escherichia coli]
>gi|1651410|dbj|BAA35613| (D90726) Thioredoxin reductase
(NADPH) (EC 1.6.4.5) [Escherichia coli]
>gi|1651416|dbj|BAA35620| (D90727) Thioredoxin reductase
(NADPH) (EC 1.6.4.5) [Escherichia coli] >gi|1787114
(AE000190) thioredoxin reductase [Escherichia coli]
Length = 321
Score = 192 bits (482), Expect = 4e-48
Identities = 117/314 (37%), Positives = 178/314 (56%), Gaps = 13/314 (4%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 3 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 62
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P L +M E E + + ++ ++ ++ E+ ++IIATGA+ R L +
Sbjct: 63 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 122
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
P EE + RGVS CA CDG F+RNQ++ VIGGG++AVEEALYL+ V ++HRRD R
Sbjct: 123 PSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 182
Query: 181 AQEIIQQRAF-KEEKINFI--WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA-FGGIFI 236
A++I+ +R K E N I + E+ GD V V ++ + + E G+F+
Sbjct: 183 AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 242
Query: 237 YVGLDP-VAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAI 290
+G P A F G L + E G+I I + +TS+PG+FA GDV +RQ T+
Sbjct: 243 AIGHSPNTAIFEGQLEL--ENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 300
Query: 291 GDGAQAAQEAYKFV 304
G G AA +A +++
Sbjct: 301 GTGCMAALDAERYL 314
sp|P94284|TRXB_BORBU THIOREDOXIN REDUCTASE >gi|2688441 (AE001154) thioredoxin reductase
(trxB) [Borrelia burgdorferi]
Length = 326
Score = 190 bits (479), Expect = 9e-48
Identities = 107/300 (35%), Positives = 171/300 (56%), Gaps = 3/300 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGPELSM 65
DV+I+GSGPAG+TA +Y+ S K +LE PGGQ+ T E+ NYPG++ I G L +
Sbjct: 27 DVIIVGSGPAGLTAGIYSVMSNYKAAILEGPEPGGQLTTTTEVYNYPGFKNGISGRNLML 86
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLE-IPGEE 124
M E + LG + V +I+ G+ + TE+ + +K++IIA G+ +KLE +
Sbjct: 87 NMREQVVNLGAKTFPETVFSIKRKGNIFYLYTENYIYKSKAVIIAVGSKPKKLETLKNSG 146
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
+ +G+S CA+CDG F+ + + VIGGG++A+ E++YL++ V ++ R++ LRA +
Sbjct: 147 LFWNKGISVCAICDGHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYLIVRKNNLRAIAM 206
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
++ K I +++S +E+ G V SV N K V E +F+ VG P
Sbjct: 207 LRDSVAKLPNIEILYNSEAIEVDG-KSSVSSVKIFNKKDNVVYELEVSAVFMAVGYKPNT 265
Query: 245 EFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
EF DE G+I+T D ++TS+ G+F+ GDV K + Q TA +G A+ E F+
Sbjct: 266 EFLKGFLDLDEEGFIVTKDVVKTSVDGVFSCGDVSNKLYAQAITAAAEGFIASVELGNFL 325
sp|P81433|TRXB_BUCAP THIOREDOXIN REDUCTASE >gi|2947035 (L43549) thioredoxin reductase
[Buchnera aphidicola]
Length = 319
Score = 189 bits (476), Expect = 2e-47
Identities = 110/312 (35%), Positives = 186/312 (59%), Gaps = 14/312 (4%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMGPELSMK 66
++I+GSGPAG TAA+Y++R+ + LL+ GGQ+ NT EIEN+PG ++ I GPEL +
Sbjct: 9 IIILGSGPAGYTAAIYSSRANLNPLLITGINKGGQLMNTNEIENWPGDFKKITGPELMNR 68
Query: 67 MAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEEY 126
M E E Y + ++E ++ E +++ ++IIATGAN R L + E ++
Sbjct: 69 MHEHSLKFKTEIVYDNIISVEFKKKPFFLLGEYNKYTCDAVIIATGANPRYLGLSSENKF 128
Query: 127 GARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQ 186
+G+S CAVCDG F++N+EI V+GGG++A+EE LYL+ F + + ++HRR+ +A++I+
Sbjct: 129 KGKGISTCAVCDGFFYKNKEIAVVGGGNTAIEETLYLSNFVKKIYLIHRRNNFKAEKILI 188
Query: 187 QRAF---KEEKINFIWDSVPMEIKGDDKKVQSVVY--KNVKTGEVTEKAFGGIFIYVGLD 241
R K +K+ +S +I G++K V ++ KN+K + + A G+F+ +G
Sbjct: 189 DRLLKIVKTKKVILHLNSTIEDILGNNKGVTHLLIKNKNLKEKKKLKIAVSGLFVAIGYI 248
Query: 242 PVAE-FAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQ 295
P + F L + D G+I ++ +T++PG+FA GDV +RQ T+ G
Sbjct: 249 PNTDIFTDQLKMKD--GYIKIKKGTHGNYTQTNIPGVFAAGDVIDHVYRQAITSSASGCM 306
Query: 296 AAQEAYKFVAEL 307
AA ++ +++ L
Sbjct: 307 AALDSERYLNSL 318
gi|1785609 (U82978) thioredoxin reductase [Borrelia burgdorferi]
Length = 320
Score = 189 bits (476), Expect = 2e-47
Identities = 104/289 (35%), Positives = 166/289 (56%), Gaps = 3/289 (1%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGPELSM 65
DV+I+GSGPAG+TA +Y+ S K +LE PGGQ+ T E+ NYPG++ I G L +
Sbjct: 27 DVIIVGSGPAGLTAGIYSVMSNYKAAILEGPEPGGQLTTTTEVYNYPGFKNGISGRNLML 86
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLE-IPGEE 124
M E + LG + V +I+ G+ + TE+ + +K++IIA G+ +KLE +
Sbjct: 87 NMREQVVNLGAKTFPETVFSIKRKGNIFYLYTENYIYKSKAVIIAVGSKPKKLETLKNSG 146
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
+ +G+S CA+CDG F+ + + VIGGG++A+ E++YL++ V ++ R++ LRA +
Sbjct: 147 LFWNKGISVCAICDGHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYLIVRKNNLRAIAM 206
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
++ K I +++S +E+ G V SV N K V E +F+ VG P
Sbjct: 207 LRDSVAKLPNIEILYNSEAIEVDG-KSSVSSVKIFNKKDNVVYELEVSAVFMAVGYKPNT 265
Query: 245 EFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDG 293
EF DE G+I+T D ++TS+ G+F+ GDV K + Q TA +G
Sbjct: 266 EFLKGFLDLDEEGFIVTKDVVKTSVDGVFSCGDVSNKPYAQAITAAAEG 314
pdb|1TDF| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys 138 Replaced
By Ser (C138s)
Length = 316
Score = 188 bits (472), Expect = 6e-47
Identities = 116/314 (36%), Positives = 177/314 (55%), Gaps = 13/314 (4%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P L +M E E + + ++ ++ ++ E+ ++IIATGA+ R L +
Sbjct: 62 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 121
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
P EE + RGVS CA DG F+RNQ++ VIGGG++AVEEALYL+ V ++HRRD R
Sbjct: 122 PSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 181 AQEIIQQRAF-KEEKINFI--WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA-FGGIFI 236
A++I+ +R K E N I + E+ GD V V ++ + + E G+F+
Sbjct: 182 AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241
Query: 237 YVGLDP-VAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAI 290
+G P A F G L + E G+I I + +TS+PG+FA GDV +RQ T+
Sbjct: 242 AIGHSPNTAIFEGQLEL--ENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 291 GDGAQAAQEAYKFV 304
G G AA +A +++
Sbjct: 300 GTGCMAALDAERYL 313
pdb|1TRB| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys 138 Replaced
By Ser (C138s)
Length = 320
Score = 188 bits (472), Expect = 6e-47
Identities = 116/314 (36%), Positives = 177/314 (55%), Gaps = 13/314 (4%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
P L +M E E + + ++ ++ ++ E+ ++IIATGA+ R L +
Sbjct: 62 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGL 121
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
P EE + RGVS CA DG F+RNQ++ VIGGG++AVEEALYL+ V ++HRRD R
Sbjct: 122 PSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 181 AQEIIQQRAF-KEEKINFI--WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA-FGGIFI 236
A++I+ +R K E N I + E+ GD V V ++ + + E G+F+
Sbjct: 182 AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241
Query: 237 YVGLDP-VAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAI 290
+G P A F G L + E G+I I + +TS+PG+FA GDV +RQ T+
Sbjct: 242 AIGHSPNTAIFEGQLEL--ENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 291 GDGAQAAQEAYKFV 304
G G AA +A +++
Sbjct: 300 GTGCMAALDAERYL 313
sp|P39916|TRXB_COXBU THIOREDOXIN REDUCTASE >gi|1075485|pir||S43131 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Coxiella burnetii
>gi|468528|emb|CAA53288| (X75627) thioredoxin reductase
(NADPH) [Coxiella burnetii]
Length = 321
Score = 188 bits (472), Expect = 6e-47
Identities = 106/313 (33%), Positives = 179/313 (56%), Gaps = 10/313 (3%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYET-IMGPELS 64
+ ++I+GSGPAG T A+Y AR+ +K +++ GGQ+ T ++ N+PG + GP+L
Sbjct: 7 HSLIILGSGPAGYTDAIYVARANLKPIMITGMEQGGQLMTTTDVANWPGEAPGLQGPKLL 66
Query: 65 MKMAEPLEG-LGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+M + G L + + + + + + ++ + ++IIATGA+ R L +P E
Sbjct: 67 ERMQKHAGGALNTQFIFDHINKPDLNPRPFLLQGDNATYSCDALIIATGASARYLGLPSE 126
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQE 183
+ Y +GVS CA CDG F+R +++ V+GGG+++VEEALYL+ VT++HRRDKLRA++
Sbjct: 127 KPYMGKGVSACATCDGFFYRAKKVAVVGGGNTSVEEALYLSHIASHVTLIHRRDKLRAEK 186
Query: 184 IIQQRAFK---EEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
++ + K E K+ +W V E+ GDD+ V V K+VK + + G+FI +G
Sbjct: 187 MLSAQLIKKVEEGKVAIVWSHVIEEVLGDDQGVTGVHLKHVKEEKTQDLTIDGLFIAIGH 246
Query: 241 DPVAEFAGNLGITDEAGWI-----ITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQ 295
DP + DEAG++ + + T++PG+F VR + +RQ A G G
Sbjct: 247 DPNTKIFKEQLEMDEAGYLRAKSGLQGNATATNIPGVFPAVVVRGQLYRQTIAAAGMGCM 306
Query: 296 AAQEAYKFVAELD 308
A +A +++ L+
Sbjct: 307 PALDAERYLDSLN 319
sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|1916317 (U92441) alkyl
hydroperoxide reductase subunit F [Staphylococcus
aureus]
Length = 507
Score = 187 bits (470), Expect = 1e-46
Identities = 108/304 (35%), Positives = 175/304 (57%), Gaps = 4/304 (1%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPE 62
++ YDV+I+G GPA +AA+YTAR ++T ++ + GGQ+N+TA IEN+ + G E
Sbjct: 203 KEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRI-GGQVNDTAGIENFITVKETTGSE 261
Query: 63 LSMKMAEPLEGLGVENAYGF-VTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEI 120
S +A ++ ++ G T IE + K+ E+ + +K++IIATGA RKL I
Sbjct: 262 FSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNI 321
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGEE+ +GV++C CDG F N+++ VIGGG+S VE A+ L VT+ +L+
Sbjct: 322 PGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELK 381
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A ++Q R ++ ++ E+ G+D V + Y+++ TGE GIF+ +GL
Sbjct: 382 ADNVLQDRLRSLSNVDIKTNAKTTEVVGED-HVTGIRYEDMNTGEEHLLNLDGIFVQIGL 440
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P + + +E G I+ D + T++PGIFA GDV + +QI ++G GA AA A
Sbjct: 441 LPNTSWLNDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNA 500
Query: 301 YKFV 304
+ ++
Sbjct: 501 FDYI 504
pir||G64491 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Methanococcus
jannaschii >gi|1592167 (U67594) thioredoxin reductase
(trxB) [Methanococcus jannaschii]
Length = 301
Score = 186 bits (468), Expect = 2e-46
Identities = 111/304 (36%), Positives = 175/304 (57%), Gaps = 7/304 (2%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+D +IIG+GP G+TA +Y R ++ L +E+ GG++ +ENYPG+E I G EL+
Sbjct: 3 HDTIIIGAGPGGLTAGIYAMRGKLNALCIEKENAGGRIAEAGIVENYPGFEEIRGYELAE 62
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEE 125
K E + Y V IE K+IT++ E++TK+I+IATG +KL + E++
Sbjct: 63 KFKNHAEKFKLPIIYDEVIKIETKERPFKVITKNSEYLTKTIVIATGTKPKKLGL-NEDK 121
Query: 126 YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEII 185
+ RG+SYC +CD F+ N+E++VIG A+ A+ L + V ++ + +L+A E I
Sbjct: 122 FIGRGISYCTMCDAFFYLNKEVIVIGRDTPAIMSAINLKDIAKKVIVITDKSELKAAESI 181
Query: 186 QQRAFKE-EKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
KE + I+++ P+EI G+++ + N K E KA GIFI +G P
Sbjct: 182 MLDKLKEANNVEIIYNAKPLEIVGEERAEGVKISVNGK--EEIIKA-DGIFISLGHVPNT 238
Query: 245 EFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
EF + GI D+ G+I TD++ RT++ GI+AVGDVR Q+ A+GDG A K+
Sbjct: 239 EFLKDSGIELDKKGFIKTDENCRTNIDGIYAVGDVR-GGVMQVAKAVGDGCVAMANIIKY 297
Query: 304 VAEL 307
+ +L
Sbjct: 298 LQKL 301
sp|O82864|AHPF_PSEPU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|3298356|dbj|BAA31469|
(AB010689) AhpF [Pseudomonas putida]
Length = 520
Score = 186 bits (467), Expect = 2e-46
Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 9/305 (2%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKT-LLLERGVPGGQMNNTAEIENYPGYETIMGP 61
++ +DV+++G GPAG AA+Y AR ++T + ER GGQ+ +T IEN+ + GP
Sbjct: 209 KEAFDVLVVGGGPAGAAAAIYAARKGIRTGVAAERF--GGQVLDTLAIENFISVQETEGP 266
Query: 62 ELSMKMAEPLEG-----LGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHR 116
+L+ + E ++ + ++ + A E G ++ + K++I+ATGA R
Sbjct: 267 KLATALEEHVKQYDVDIMNLQRGEALIPAAEG-GLHEVRLAGGASLKAKTVILATGARWR 325
Query: 117 KLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRR 176
++ +PGE+EY RGV+YC CDG F+ + + VIGGG+S VE A+ L VT++
Sbjct: 326 EMNVPGEQEYRGRGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAQVTLIEFD 385
Query: 177 DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFI 236
+LRA ++Q++ +N I ++ E+ G+ +KV + YK+ T E E A GIF+
Sbjct: 386 SQLRADAVLQRKLRSLPNVNVITSALTTEVLGNGEKVTGLRYKDRSTDEQHEVALEGIFV 445
Query: 237 YVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQA 296
+GL P ++ G II D +TS+PG+FA GDV ++QI A+G+GA+A
Sbjct: 446 QIGLLPNTDWLKGTVELSPRGEIIVDAKGQTSIPGVFAAGDVTTVPYKQIVIAVGEGAKA 505
Query: 297 AQEAY 301
+ A+
Sbjct: 506 SLAAF 510
sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|2098747 (U94336) alkyl
hydroperoxide reductase subunit F [Xanthomonas
campestris]
Length = 530
Score = 186 bits (467), Expect = 2e-46
Identities = 102/305 (33%), Positives = 172/305 (55%), Gaps = 9/305 (2%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKT-LLLERGVPGGQMNNTAEIENYPGYETIMGP 61
++ +DV+++G GPAG AA+Y AR ++T + ER GGQ+ +T IEN+ GP
Sbjct: 210 KEAFDVLVVGGGPAGSAAAVYAARKGIRTGVAAERF--GGQVLDTMSIENFISVPETEGP 267
Query: 62 ELSMKMAE-----PLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHR 116
+++ + + ++ + ++ A + A D G + + +K++I++TGA R
Sbjct: 268 KMAAALEQHVRQYDVDIMNLQRAEQLIPAGAD-GLIEIKLANGASLKSKTVILSTGARWR 326
Query: 117 KLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRR 176
++ +PGE++Y +GV+YC CDG F+ + + VIGGG+S VE A+ L VT++
Sbjct: 327 QMNVPGEDQYKNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLVEFD 386
Query: 177 DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFI 236
DKLRA E++Q++ + I + E+ GD +KV +VYK+ G++ G+F+
Sbjct: 387 DKLRADEVLQRKLRSLHNVRIITSAQTTEVLGDGQKVTGLVYKDRTGGDIQHIELEGVFV 446
Query: 237 YVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQA 296
+GL P EF G II DD +T +PG+FA GD ++QI A+G+G++A
Sbjct: 447 QIGLLPNTEFLRGTVALSPRGEIIVDDRGQTDVPGVFAAGDATTVPYKQIVIAMGEGSKA 506
Query: 297 AQEAY 301
A A+
Sbjct: 507 ALSAF 511
gb|AAD52148.1|AF129406_2 (AF129406) alkyl hydroperoxide reductase subunit F [Bacteroides
fragilis]
Length = 516
Score = 184 bits (463), Expect = 7e-46
Identities = 101/301 (33%), Positives = 170/301 (55%), Gaps = 3/301 (0%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPEL 63
KKYDV++ G GPAG AA+Y+AR + ++ + GGQ+ T IEN + G +L
Sbjct: 210 KKYDVIVAGGGPAGSAAAIYSARKGLNVAVIAERI-GGQVKETVGIENLISVPSTTGSQL 268
Query: 64 SMKMAEPLEGLGVENA-YGFVTAIEDHGDYKKIITEDDE-FVTKSIIIATGANHRKLEIP 121
+ + + ++ + + IE G K + + E F ++I+ATGA+ RKL +P
Sbjct: 269 ADNLKTHMSQYPIDLLEHRQIEKIELDGKDKVLTAKGGERFSAPAVIVATGASWRKLNVP 328
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
GE EY RGV++C CDG F++ +++ V+GGG+S +E A+ L VT++ D+L+A
Sbjct: 329 GEAEYIGRGVAFCPHCDGPFYKGKQVAVVGGGNSGIEAAIDLAGICSKVTVLEFMDELKA 388
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLD 241
+++Q++ + + S E+ G+ KV + K+ KT E + GIF+ +GL
Sbjct: 389 DQVLQEKLKSLPNVEVLVHSQTTEVVGNGDKVTGIRVKDRKTEEERVISLDGIFVQIGLV 448
Query: 242 PVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ ++ + G I+ D H RT++PGI+A GDV ++QI A+G+GA+AA A+
Sbjct: 449 ANSGIFRDVVEVNRPGEIVIDAHCRTNVPGIYAAGDVSTVPYKQIIIAMGEGAKAALAAF 508
Query: 302 K 302
+
Sbjct: 509 E 509
sp|P19480|AHPF_SALTY ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (ALKYL HYDROPEROXIDE
REDUCTASE F52A PROTEIN) >gi|96722|pir||B35441 alkyl
hydroperoxide reductase (EC 1.6.-.-) F52a protein -
Salmonella typhimurium >gi|153863 (J05478) alkyl
hydroperoxide reductase [Salmonella typhimurium]
Length = 521
Score = 183 bits (460), Expect = 2e-45
Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDV+I+GSGPAG AA+Y+AR ++T L+ GGQ+ +T +IENY G +L+
Sbjct: 213 YDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-GGQVLDTVDIENYISVPKTEGQKLAG 271
Query: 66 KMAEPLEGLGVE-----NAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
+ + V+ +A V A + G ++ +SIIIATGA R + +
Sbjct: 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNV 331
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE++Y +GV+YC CDG F+ + + VIGGG+S VE A+ L + VT++ +++
Sbjct: 332 PGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A +++Q + + ++ I ++ E+KGD KV + Y++ +G++ A GIF+ +GL
Sbjct: 392 ADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P + + G II D TS+ G+FA GD ++QI A G+GA+A+ A
Sbjct: 452 LPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 511
Query: 301 YKFV 304
+ ++
Sbjct: 512 FDYL 515
emb|CAA56112| (X79603) disulphide oxidoreductase [Entamoeba histolytica]
>gi|1098299|prf||2115369A disulfide oxidoreductase-like
protein [Entamoeba histolytica]
Length = 316
Score = 183 bits (459), Expect = 2e-45
Identities = 116/310 (37%), Positives = 171/310 (54%), Gaps = 12/310 (3%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLER----GVP-GGQMNNTAEIENYPGYET--- 57
+DVVIIGSGPA TAA+Y RS +K ++ E GV GGQ+ T IEN+
Sbjct: 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFRISRISNW 64
Query: 58 IMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDD-EFVTKSIIIATGANHR 116
I G EL M M + + + +T + K+ TE+ E +TKS+IIA+ A +
Sbjct: 65 IDGNELMMNMRTQSRSMELLSLQKLLTMLNFSTQPFKLFTEEGKEVLTKSVIIASNATAK 124
Query: 117 KLEIPGEEEYGARGVSYCAVCDGA--FFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMH 174
+ + GVS CA+CDGA FRN+ ++V GGGD+A+EEAL+LT++G V I+H
Sbjct: 125 EACSRRRQILAKIGVSACAICDGAVPIFRNKVLMVEGGGDAAMEEALHLTKYGSKVIILH 184
Query: 175 RRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGI 234
RRD RA + +Q+R KI IW+S +E++GD + N+ +GE G+
Sbjct: 185 RRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGL 244
Query: 235 FIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGA 294
F +G ++F G T + G+I+T+ +TS+ G+FA GDV + +RQ A G G
Sbjct: 245 FYAIGHSQNSKFLGGQVKTADDGYILTEG-PKTSVDGVFACGDVCDRVYRQAIVAAGSGC 303
Query: 295 QAAQEAYKFV 304
AA K++
Sbjct: 304 MAALSCEKWL 313
sp|P42974|DHNA_BACSU NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE REDUCTASE)
>gi|1064783|dbj|BAA11269| (D78193) alkyl hydroperoxide
reductase [Bacillus subtilis] >gi|2636557|emb|CAB16047|
(Z99124) alkyl hydroperoxide reductase (large subunit)
and NADH dehydrogenase [Bacillus subtilis]
Length = 509
Score = 179 bits (450), Expect = 2e-44
Identities = 99/304 (32%), Positives = 173/304 (56%), Gaps = 5/304 (1%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKT-LLLERGVPGGQMNNTAEIENYPGYETIMGP 61
++ +DV+++G GPAG +AA+YTAR ++T ++ ER GGQ+ +T IEN+ + GP
Sbjct: 206 KEPFDVLVVGGGPAGASAAIYTARKGIRTGVVAERF--GGQVLDTMSIENFISVKATEGP 263
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEI 120
+L+ + E ++ ++ + D ++ E+ + +K++I++TGA R + +
Sbjct: 264 KLAASLEEHVKEYDIDVMNLQRAKRLEKKDLFELELENGAVLKSKTVILSTGARWRNVNV 323
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE+E+ +GV+YC CDG F +++ VIGGG+S +E A+ L VT++ +L+
Sbjct: 324 PGEQEFKNKGVAYCPHCDGPLFEGKDVAVIGGGNSGIEAAIDLAGIVNHVTVLEFAPELK 383
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A E++Q+R + + + ++ EI G D+ V + Y + +TGE G+F+ +GL
Sbjct: 384 ADEVLQKRLYSLPNVTVVKNAQTKEITG-DQSVNGITYVDRETGEEKHVELQGVFVQIGL 442
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P E+ + G II D H TS+PG+FA GD + QI ++G GA AA A
Sbjct: 443 VPNTEWLEGTVERNRMGEIIVDKHGATSVPGLFAAGDCTDSAYNQIIISMGSGATAALGA 502
Query: 301 YKFV 304
+ ++
Sbjct: 503 FDYL 506
gi|1778524 (U82598) AhpF homolog [Escherichia coli] >gi|1786823 (AE000166)
alkyl hydroperoxide reductase, F52a subunit;
detoxification of hydroperoxides [Escherichia coli]
Length = 531
Score = 178 bits (448), Expect = 4e-44
Identities = 98/304 (32%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDV+I+GSGPAG AA+Y+AR ++T L+ GGQ+ +T +IENY G +L+
Sbjct: 223 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-GGQILDTVDIENYISVPKTEGQKLAG 281
Query: 66 KMAEPLEGLGVE-----NAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
+ ++ V+ +A + A + G ++ +SII+ATGA R + +
Sbjct: 282 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNV 341
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE++Y +GV+YC CDG F+ + + VIGGG+S VE A+ L + VT++ +++
Sbjct: 342 PGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 401
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A +++Q + + ++ I ++ E+KGD KV + Y++ +G++ GIF+ +GL
Sbjct: 402 ADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 461
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P + + G II D T++ G+FA GD ++QI A G+GA+A+ A
Sbjct: 462 LPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 521
Query: 301 YKFV 304
+ ++
Sbjct: 522 FDYL 525
sp|P35340|AHPF_ECOLI ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (ALKYL HYDROPEROXIDE
REDUCTASE F52A PROTEIN) >gi|1651247|dbj|BAA35236|
(D90701) Alkyl hydroperoxide reductase F52a protein (EC
1.6.4.-) . [Escherichia coli] >gi|1651252|dbj|BAA35245|
(D90702) Alkyl hydroperoxide reductase F52a protein (EC
1.6.4.-) . [Escherichia coli]
Length = 521
Score = 178 bits (448), Expect = 4e-44
Identities = 98/304 (32%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDV+I+GSGPAG AA+Y+AR ++T L+ GGQ+ +T +IENY G +L+
Sbjct: 213 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-GGQILDTVDIENYISVPKTEGQKLAG 271
Query: 66 KMAEPLEGLGVE-----NAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
+ ++ V+ +A + A + G ++ +SII+ATGA R + +
Sbjct: 272 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNV 331
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE++Y +GV+YC CDG F+ + + VIGGG+S VE A+ L + VT++ +++
Sbjct: 332 PGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A +++Q + + ++ I ++ E+KGD KV + Y++ +G++ GIF+ +GL
Sbjct: 392 ADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 451
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P + + G II D T++ G+FA GD ++QI A G+GA+A+ A
Sbjct: 452 LPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 511
Query: 301 YKFV 304
+ ++
Sbjct: 512 FDYL 515
sp|P26829|DHNA_BACSP NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE REDUCTASE)
>gi|80165|pir||JX0166 NADH dehydrogenase (EC 1.6.99.3) -
Bacillus sp >gi|216304|dbj|BAA01545| (D10701) NADH
dehydrogenase, alpha-2 subunit [Bacillus alcalophilus]
Length = 519
Score = 175 bits (439), Expect = 5e-43
Identities = 98/300 (32%), Positives = 168/300 (55%), Gaps = 3/300 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+DV+++G GPAG ++A+Y AR ++T ++ GGQ+ +T IEN+ + GP+L+
Sbjct: 209 FDVLVVGGGPAGASSAIYAARKGIRTGIVADRF-GGQIMDTLSIENFISQKYTEGPKLAA 267
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEIPGEE 124
+ E ++ ++ + D +I E+ + +KS+I++TGA R + +PGE+
Sbjct: 268 SLEEHVKEYDIDVMKLQRAKRLEKKDLIEIELENGAVLKSKSVILSTGARWRNVGVPGEQ 327
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
E+ +GV+YC CDG F +++ VIGGG+S VE A+ L VT++ +L+A E+
Sbjct: 328 EFKNKGVAYCPHCDGPLFEGKDVAVIGGGNSGVEAAIDLAGIVNHVTVLEFMPELKADEV 387
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+Q+R + I ++ EI GDD KV + Y + T EV G+F+ +GL P
Sbjct: 388 LQERLNSLPNVTVIKNAQTKEITGDD-KVNGISYMDRDTEEVHHIELAGVFVQIGLVPNT 446
Query: 245 EFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
++ + G I+ D H T++PG+FA GD ++QI ++G GA AA A+ ++
Sbjct: 447 DWLDGTLERNRFGEIVVDSHGATNVPGVFAAGDCTNSAYKQIIISMGSGATAALGAFDYL 506
pir||A49911 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -
Amphibacillus xylanus >gi|216220|dbj|BAA33809|
(AB018435) NADH oxidase [Amphibacillus xylanus]
Length = 509
Score = 171 bits (429), Expect = 7e-42
Identities = 103/304 (33%), Positives = 168/304 (54%), Gaps = 11/304 (3%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+DV++IG GPAG ++A+Y AR ++ ++ GGQ+ +T IEN+ G + GP+L
Sbjct: 209 FDVLVIGGGPAGASSAIYAARKGIRVGIIADRF-GGQVMDTLGIENFIGTKYTEGPKLIS 267
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE---DDEFVTKS--IIIATGANHRKLEI 120
++ + + ++ G + H KK + E D+ V KS II+ATGA R + +
Sbjct: 268 EIEQHVNEYNIDVMKG----LRAHNIEKKDLFEVQLDNGAVLKSKTIILATGARWRDIGV 323
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR 180
PGE+EY +GV+YC CD F + + V+GGG+S +E AL L + VT+ +L+
Sbjct: 324 PGEKEYKNKGVAYCTHCDAPLFEGKHVAVVGGGNSGIESALDLAGIVKHVTVFEFMSELK 383
Query: 181 AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGL 240
A ++Q+R ++ I ++ EI GD+ V+ + Y + T E G FI +GL
Sbjct: 384 ADAVLQERLRSLPNVDVILNAQTTEITGDE-TVKGISYIDRTTNEEKHVELQGAFIQIGL 442
Query: 241 DPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
P E+ G+ ++ G I+ D +TS+PGIFA GD ++QI ++G GA AA A
Sbjct: 443 APNTEWLGDTVERNQIGEIVIDKKGQTSVPGIFAAGDCTDTPYKQIIVSMGAGATAALGA 502
Query: 301 YKFV 304
+ ++
Sbjct: 503 FDYL 506
gb|AAC82839.1| (AF016485) trxB [Halobacterium sp. NRC-1]
>gi|2822432|gb|AAC82938.1| (AF016485) trxB
[Halobacterium sp. NRC-1]
Length = 205
Score = 171 bits (428), Expect = 9e-42
Identities = 86/203 (42%), Positives = 134/203 (65%), Gaps = 2/203 (0%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY-ETIM 59
MTE +D+VI GSG AG++AA+Y AR++++ L+LE PGGQ+ T ++ENY G+ + +
Sbjct: 1 MTEDSHDLVIAGSGIAGLSAAVYAARADLEPLVLEGDEPGGQLTLTTDVENYLGFPDGVG 60
Query: 60 GPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKI-ITEDDEFVTKSIIIATGANHRKL 118
G +L + E E G + +G + A + G ++ ++ D T+S+I+ATGA+ R +
Sbjct: 61 GMDLVQRGKEQAEQFGAQFEHGRIEAADLDGQPLELSLSTGDTLYTRSLIVATGASARWV 120
Query: 119 EIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDK 178
E+E G+S CA CDGAF R ++LV+GGGDSA+EEAL+L +F SVT++HRR++
Sbjct: 121 GAENEDELMGAGLSTCATCDGAFHRGDDVLVVGGGDSAMEEALFLAKFADSVTVVHRREE 180
Query: 179 LRAQEIIQQRAFKEEKINFIWDS 201
LRA EI+ RA + + F W++
Sbjct: 181 LRASEIMADRARDHDDVQFRWNT 203
dbj|BAA25696| (AB010712) NADH oxidase/alkyl hydroperoxidase reductase
[Streptococcus mutans]
Length = 510
Score = 164 bits (410), Expect = 1e-39
Identities = 100/301 (33%), Positives = 164/301 (54%), Gaps = 4/301 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+DV++IG GPAG +AA+Y AR +KT LL + GGQ+ T IEN G + GP+L
Sbjct: 209 FDVLVIGGGPAGNSAAIYAARKGVKTGLLAETM-GGQVMETVGIENMIGTPYVEGPQLMA 267
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEIPGEE 124
++ E + V+ D ++ ++ + K+ ++A GA RK+ +PGE+
Sbjct: 268 QVEEHTKSYSVDIMKAPRAKSIQKTDLVEVELDNGAHLKAKTAVLALGAKWRKINVPGEK 327
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
E+ +GV+YC CDG F ++++ VIGGG+S +E A+ L V I+ +L+A +I
Sbjct: 328 EFFNKGVTYCPHCDGPLFTDKKVAVIGGGNSGLEAAIDLAGLASHVYILEFLPELKADKI 387
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+Q RA + I + + EI G+D V+ + Y + T E G+F+ +GL P
Sbjct: 388 LQDRAEALDNITILTNVATKEIIGND-HVEGLRYSDRTTNEEYLLDLEGVFVQIGLVPST 446
Query: 245 EFAGNLGIT-DEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
++ + G+ +E G II T++P IFA GD ++QI ++G GA AA A+ +
Sbjct: 447 DWLKDSGLALNEKGEIIVAKDGATNIPAIFAAGDCTDSAYKQIIISMGSGATAALGAFDY 506
Query: 304 V 304
+
Sbjct: 507 L 507
pir||JC2311 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) precursor -
Streptococcus mutans >gi|464216|dbj|BAA04825| (D21803)
NADH oxidase [Streptococcus mutans]
Length = 510
Score = 164 bits (410), Expect = 1e-39
Identities = 100/301 (33%), Positives = 164/301 (54%), Gaps = 4/301 (1%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+DV++IG GPAG +AA+Y AR +KT LL + GGQ+ T IEN G + GP+L
Sbjct: 209 FDVLVIGGGPAGNSAAIYAARKGVKTGLLAETM-GGQVMETVGIENMIGTPYVEGPQLMA 267
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANHRKLEIPGEE 124
++ E + V+ D ++ ++ + K+ ++A GA RK+ +PGE+
Sbjct: 268 QVEEHTKSYSVDIMKAPRAKSIQKTDLVEVELDNGAHLKAKTAVLALGAKWRKINVPGEK 327
Query: 125 EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEI 184
E+ +GV+YC CDG F ++++ VIGGG+S +E A+ L V I+ +L+A +I
Sbjct: 328 EFFNKGVTYCPHCDGPLFTDKKVAVIGGGNSGLEAAIDLAGLASHVYILEFLPELKADKI 387
Query: 185 IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVA 244
+Q RA + I + + EI G+D V+ + Y + T E G+F+ +GL P
Sbjct: 388 LQDRAEALDNITILTNVATKEIIGND-HVEGLRYSDRTTNEEYLLDLEGVFVQIGLVPST 446
Query: 245 EFAGNLGIT-DEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKF 303
++ + G+ +E G II T++P IFA GD ++QI ++G GA AA A+ +
Sbjct: 447 DWLKDSGLALNEKGEIIVAKDGATNIPAIFAAGDCTDSAYKQIIISMGSGATAALGAFDY 506
Query: 304 V 304
+
Sbjct: 507 L 507
emb|CAB57297.1| (AJ243598) NADH oxidase [Sulfolobus solfataricus]
Length = 332
Score = 126 bits (314), Expect = 2e-28
Identities = 97/313 (30%), Positives = 150/313 (46%), Gaps = 16/313 (5%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQMNNTAE---IENYPGYETIMG 60
+YD+V+IG GP G+ Y +MKTLL++ + GGQ+ + + + G I
Sbjct: 3 EYDIVVIGGGPVGLFGTFYAGLRDMKTLLIDAQDELGGQLVSLYPEKIVYDVGGLAGIQA 62
Query: 61 PELSMKMAEPLEGLGVE-NAYGFVTAIEDHGDYKKII-TEDDEFVTKSIIIATGANH--- 115
EL+ ++ E + G + IE D I+ T+ + TK+I IA G
Sbjct: 63 YELAQRLIEQAKMFGPDIKVNELADMIEKTNDNMWIVKTDKATYKTKTIFIAAGIGKIVP 122
Query: 116 RKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHR 175
+L GE EY RGV Y V F + +L++GGGDSAV+ AL L +SVT++HR
Sbjct: 123 SRLGAKGEIEYENRGVYY-TVRRKKDFEGKRVLIVGGGDSAVDWALTLAPVAKSVTLIHR 181
Query: 176 RDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIF 235
RD+LRA E + F+ + ++W + E+KGD KV + + +T E +
Sbjct: 182 RDQLRAHERSVKELFRVANV-YVWHEL-KEVKGDGNKVTQAIIFDNRTKEEKVLDVDSVI 239
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKD----FRQITTAIG 291
I +G G+T + I+ + M T+LPG++A GD+ Q + I
Sbjct: 240 ISIGYKGDLGNIPKWGVTMKGRDIVVNGRMETNLPGVYAGGDIVQMEGSPKLALIAVGFA 299
Query: 292 DGAQAAQEAYKFV 304
A A A K+V
Sbjct: 300 HAAIAISVAKKYV 312
emb|CAB51948.1| (AJ243915) thioredoxin reductase [Staphylococcus xylosus]
Length = 92
Score = 106 bits (261), Expect = 3e-22
Identities = 45/85 (52%), Positives = 65/85 (75%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+D+ IIG+GPAGMTAA+Y +R+ + T+++ERG+PGGQM NT E+EN+PG+E + GP+LS
Sbjct: 7 FDIAIIGAGPAGMTAAVYASRANLSTVMIERGMPGGQMANTEEVENFPGFEMVTGPDLST 66
Query: 66 KMAEPLEGLGVENAYGFVTAIEDHG 90
KM E + G + YG + +IED G
Sbjct: 67 KMFEHAKKFGAKYQYGDIKSIEDKG 91
emb|CAB07954.1| (Z93939) thioredoxine reductase [Bacillus subtilis]
>gi|2635708|emb|CAB15201| (Z99120) similar to
thioredoxin reductase [Bacillus subtilis]
Length = 332
Score = 103 bits (254), Expect = 2e-21
Identities = 90/314 (28%), Positives = 143/314 (44%), Gaps = 18/314 (5%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP--GGQMNNTAE---IENYPGYETI 58
K YD+ IIG GP G+ A Y + ++E +P GGQ++ I + G+ I
Sbjct: 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIE-SLPQLGGQLSALYPEKYIYDVAGFPKI 64
Query: 59 MGPELSMKMAEPL----EGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIA-TGA 113
EL + E + + + +E A V D G +K + + + +S I A GA
Sbjct: 65 RAQELINNLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLVQMKKPTTLKRSCITAGNGA 123
Query: 114 -NHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTI 172
RKLE+ E+Y + + Y V D F + + ++GGGDSAV+ AL L + V+I
Sbjct: 124 FKPRKLELENAEQYEGKNLHYF-VDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSI 182
Query: 173 MHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFG 232
+HRRDK RA E + K+N + VP E+ G+D K++ +V + VK
Sbjct: 183 IHRRDKFRAHEHSVEN-LHASKVNVLTPFVPAELIGED-KIEQLVLEEVKGDRKEILEID 240
Query: 233 GIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDV--RQKDFRQITTAI 290
+ + G N G+ E I+ M T++ G FA GD+ + I +
Sbjct: 241 DLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGF 300
Query: 291 GDGAQAAQEAYKFV 304
G+ A A ++
Sbjct: 301 GEAPTAVNNAKAYM 314
dbj|BAA75319.1| (AB011836) alkyl hydroperoxide reductase large subunit [Bacillus
halodurans]
Length = 305
Score = 98.7 bits (242), Expect = 6e-20
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 35/303 (11%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMN------------NTAE 48
M +++ DV IIG GPAG+ AA+ R+ + +++ G P + + A+
Sbjct: 1 MEKQQLDVAIIGGGPAGLNAALVLGRARKQVAVIDEGRPRNAVTREAHGFLTRDGISPAD 60
Query: 49 IENYPGYETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSII 108
E I P +S + + GV+ + VTA E F TK ++
Sbjct: 61 FRRIAKEEIIAYPNVSFVADKAVSIAGVDGQFQIVTA------------EGISFETKKLL 108
Query: 109 IATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQ 168
A G R L+IPG E + C CDG R++ ++VI G+ + A ++ +
Sbjct: 109 FAVGMKDRPLDIPGLVEAYGKSAFVCPYCDGWELRDESLVVINKGEELLHFAPIISGWTD 168
Query: 169 SVTI-MHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVT 227
TI + D+L Q+ + ++ ++DS I +D V VV + + T
Sbjct: 169 RFTICTNGPDELTED---QREELRRHQVP-VYDSPIRSIDSNDGIVHQVVLQ-----DGT 219
Query: 228 EKAFGGIFIYVGLDPVAEFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQI 286
GIF L P ++ ++G EAG ++ DD +TS+PG+++ GDV K ++ I
Sbjct: 220 IIPCRGIFFKPELIPGSDLPQSIGCDITEAGMVVVDDFGKTSVPGVYSAGDVASKMYQAI 279
Query: 287 TTA 289
A
Sbjct: 280 AAA 282
emb|CAB12121| (Z99105) similar to thioredoxin reductase [Bacillus subtilis]
Length = 336
Score = 94.0 bits (230), Expect = 1e-18
Identities = 85/319 (26%), Positives = 149/319 (46%), Gaps = 24/319 (7%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP--GGQMN---NTAEIENYPGYET 57
++ YDV IIG GP G+ A Y E+KT ++E +P GG+++ I + G
Sbjct: 5 QEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEF-LPKLGGKVSLFFPEKIIRDIGGIPG 63
Query: 58 IMGPELSMKMAEPLEGLGVENAYGF-VTAIEDHGDYKKIIT--EDDEFVTKSIIIATGAN 114
I G +L ++ E + VT E D ++T E + T+++I+A G
Sbjct: 64 IAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDDGTIVLTGSEGKKHYTRTVILACGMG 123
Query: 115 HRKL-EIPGEE--EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVT 171
++ E E+ Y + + Y AF + + +++ GGGD+AV+ A L SVT
Sbjct: 124 TLEVNEFDSEDAARYAGKNLHYGVEKLDAF-KGKRVVISGGGDTAVDWANELEPIAASVT 182
Query: 172 IMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAF 231
++HRR++ E + K+ + + ++ GD++ ++SV + ++G+ +
Sbjct: 183 VVHRREEFGGMESSVTK-MKQSSVRVLTPYRLEQLNGDEEGIKSVTVCHTESGQRKDIEI 241
Query: 232 GGIFIYVG----LDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVR--QKDFRQ 285
+ I G L P+ E+ G+ E G + D HMRT+LPG+F GD + R
Sbjct: 242 DELIINHGFKIDLGPMMEW----GLEIEEGRVKADRHMRTNLPGVFVAGDAAFYESKLRL 297
Query: 286 ITTAIGDGAQAAQEAYKFV 304
I +G A A ++
Sbjct: 298 IAGGFTEGPTAVNSAKAYL 316
dbj|BAA21091| (D86223) glutamate synthase [Pyrococcus sp.]
Length = 481
Score = 92.1 bits (225), Expect = 6e-18
Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 48/336 (14%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGP 61
+K V IIG+GPAG+TAA A+ + E PGG + Y E +
Sbjct: 154 KKGQKVAIIGAGPAGLTAAGELAKLGYDVTIYEALHEPGGVLM-------YGIPEFRLPK 206
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANH-RKLEI 120
E+ K E L LGV+ + DH + + E+ ++ I +GA R +
Sbjct: 207 EIVNKEIEKLRKLGVK-------ILTDHVVGRTVTIEELLQEYDAVFIGSGAGTPRLINA 259
Query: 121 PGEEEYGARGVSYCAV------------CDGAFFRNQEILVIGGGDSAVEEALYLTRFGQ 168
PG G + D + ++++VIG G++A++ A RFG
Sbjct: 260 PGINLNGIYTANEFLTRVNLMKAYLFPEYDTPVYVGKKVIVIGAGNTAMDAARSARRFGA 319
Query: 169 SVTIMHRR--DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVK--- 222
VTI +RR + + A+E + A KEE I F++ P+E GD+ +V++V ++ +K
Sbjct: 320 EVTIAYRRGEEDVSAREEEVEHA-KEEGIKFVYFVNPVEFIGDENGRVKAVKFEKMKALD 378
Query: 223 ------------TGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLP 270
TGE + I +G P G+ E G I+ D+++ TS+P
Sbjct: 379 ERDARGKRKIVGTGEYVTLEADTVIIAIGKHPNRLIINTPGLKVERGKIVVDENLMTSIP 438
Query: 271 GIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAE 306
G+FA GD + + + A+GDG +AA+ ++++ +
Sbjct: 439 GVFAGGDAIRGE-ATVILAMGDGRKAAKAIHEYLTK 473
emb|CAA14966| (AJ235272) THIOREDOXIN REDUCTASE (trxB2) [Rickettsia prowazekii]
Length = 334
Score = 88.9 bits (217), Expect = 5e-17
Identities = 88/314 (28%), Positives = 142/314 (45%), Gaps = 19/314 (6%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQ---MNNTAEIENYPGYETIMGPE 62
D+VIIGSGP G+ A MK +++ + V GGQ + I + P Y I E
Sbjct: 5 DIVIIGSGPVGLFAVFQAGMLGMKCHVIDAQEVIGGQCITLYPEKHIYDIPAYPKIAAKE 64
Query: 63 LSMKMAEPLEGLG-VENAYGFVTAIEDHGDYKKIITEDDEFV-TKSIIIATGANH---RK 117
L ++ V + T + H D+ +I T + + +K IIIA GA K
Sbjct: 65 LIKQLESQAAPFNPVYHLNQQATELNKHDDFFEIKTSKNTLIKSKVIIIAAGAGAFGPNK 124
Query: 118 LEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
I E + + + Y + D + F + I+V GGGDSAV+ A+ L+ + ++HRRD
Sbjct: 125 PPIANIEAFEGKSIFYF-INDKSKFLGKNIVVAGGGDSAVDWAITLSEIANKIYLVHRRD 183
Query: 178 KLRA--QEIIQQRAFKEE-KINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGI 234
K A + + Q R E KI + + G + +++SV+ K+++ K I
Sbjct: 184 KFTAATESVRQLRHIAETGKIELVTGYQLNNLDGHNSELRSVIVKDLQNN--IRKLDANI 241
Query: 235 FI-YVGLDPVAEFAGNLGITDEAGWIITDD-HMRTSLPGIFAVGDVRQ--KDFRQITTAI 290
+ + GL N G I D+ + +T++ GI+A+GDV + I T
Sbjct: 242 LLPFFGLKQDLGPLANWGFNVRLQHIEVDNYYYQTNIKGIYAIGDVAHYVGKLKLIITGF 301
Query: 291 GDGAQAAQEAYKFV 304
+ A + AY V
Sbjct: 302 AEAACSLHHAYSRV 315
gb|AAD35465.1|AE001718_2 (AE001718) NADH oxidase [Thermotoga maritima]
Length = 443
Score = 87.8 bits (214), Expect = 1e-16
Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 43/302 (14%)
Query: 5 KYDVVIIGSGPAGMTAAMYTAR--SEMKTLLLERG----VPGGQ---MNNTAEIEN-YPG 54
+YDVV++G GPAG+ AA T R + K L++++ VP G + +EN Y G
Sbjct: 2 RYDVVVVGGGPAGLVAAFTTKRFFGDKKILVVKKTEKEMVPCGIPYIFHTLGSVENDYMG 61
Query: 55 YETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVT-KSIIIATGA 113
E + +G G++ V ++ + D KK+ T+ + ++ +IIATG+
Sbjct: 62 IE------------DRFKGAGIDLLIDEV--VDGNPDEKKLFTKSGKEISYDKLIIATGS 107
Query: 114 NHRKLEIPGEEEYGA----RGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQS 169
+ +IPG + G + Y + ++++IGGG VE A + + G++
Sbjct: 108 SPNIPKIPGVDLKGVFTVPKEADYLKLLHEKVKDANDVVIIGGGFIGVEVADEIKKSGKN 167
Query: 170 VTIMHRRDKLRAQEI------IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKT 223
VT++ D L + ++ + + + + EI G +K V+ V + +
Sbjct: 168 VTLVEIMDSLLPVSFDPDFGELARKELESDNVKVLTGRKVTEILGTEK-VEGV---KLDS 223
Query: 224 GEVTEKAFGGIFIYVGLDPVAEFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGD-VRQK 281
GE + + G P +E A LG+ E G+I TD++MRTS P IFA GD V+ K
Sbjct: 224 GETIPADV--VVLATGYKPNSELARKLGLKVTELGFIETDEYMRTSKPDIFAAGDCVQHK 281
Query: 282 DF 283
DF
Sbjct: 282 DF 283
dbj|BAA18866| (D90917) hypothetical protein [Synechocystis sp.]
Length = 326
Score = 85.8 bits (209), Expect = 4e-16
Identities = 81/313 (25%), Positives = 143/313 (44%), Gaps = 31/313 (9%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYE-TIMGPELS 64
YD +++G G G++AA+Y AR +K L++E+G G+ ++ NY G + G ++
Sbjct: 16 YDAIVLGGGMGGLSAAIYLARYGLKCLVVEKG--RGRSFWMQDLRNYVGLDPDTPGRDII 73
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGD---YKKIITEDDE----FVTKSIIIATGA--NH 115
+ G + G+V + D GD K + + D F TK +I ATG N
Sbjct: 74 THSTQQALHWGADLLRGYVEDVTDEGDTLAVKVKVGKKDSLYPIFRTKYVIAATGIIDNL 133
Query: 116 RKLE-IPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMH 174
+LE + +Y + C +CDG +Q+ ++I G + + A L F +T++
Sbjct: 134 PQLEDMQNVYDYAGYTLHVCMICDGFDMWDQKAVLIAGTEGQINAAFVLNWFTPYITVLT 193
Query: 175 R-----RDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEK 229
D+++A+ E I + G+D K+ V + G V E
Sbjct: 194 HGLCTVGDEMKAKLADHGYPLHEAAIT--------KFLGEDHKMSGV---ELVDGTVVE- 241
Query: 230 AFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTA 289
A G+ + G G+ + ++T+D +TS P IFA+GD++ K Q++ A
Sbjct: 242 ATTGLINMGSVYHNHYLKGIEGLEWDGENLVTNDMAQTSHPRIFALGDLK-KGLNQVSVA 300
Query: 290 IGDGAQAAQEAYK 302
+ DG AA + ++
Sbjct: 301 VADGTLAATQIWR 313
emb|CAB50632.1| (AJ248288) GLUTAMATE SYNTHASE SMALL CHAIN. [Pyrococcus abyssi]
Length = 475
Score = 80.4 bits (195), Expect = 2e-14
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 56/336 (16%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPELSMK 66
V +IG+GPAG+T A A+ + + E PGG + Y E + E+ K
Sbjct: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLA-------YGIPEFRLPKEILRK 209
Query: 67 MAEPLEGLGVE----NAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKL-EIP 121
+ L+ LGVE + G I + ++ E D +I I+TGA KL +IP
Sbjct: 210 ELKKLKFLGVEIKTDHIVGRTVTIPE------LLEEYD-----AIFISTGAGTPKLLKIP 258
Query: 122 GEEEYGARGVSYCAV------------CDGAFFRNQEILVIGGGDSAVEEALYLTRFGQS 169
G G + D + ++VIG G++A++ A R G
Sbjct: 259 GINLNGIYSANEFLTRINLMKAYKFPEYDTPIVVGKRVIVIGAGNTAMDAARSALRLGAE 318
Query: 170 VTIMHRRDKLRAQEIIQQ-RAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVKTGEVT 227
V I +RR K I++ + KEE + F++ P+E GD++ +V++V ++ +K E
Sbjct: 319 VIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAVKFEKMKPLEER 378
Query: 228 EK------AFGGIFIYVGLDPVAEFAGNL----------GI-TDEAGWIITDDHMRTSLP 270
+K G +I V D V G G+ E G II D+++ TS+P
Sbjct: 379 DKRGKRKIVGTGEYITVEADTVIIAIGQTPNKILWRTTPGLKVREDGTIIVDENLMTSIP 438
Query: 271 GIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAE 306
G+FA GD + + + A+GDG +AA+ ++++++
Sbjct: 439 GVFAGGDAIRGE-ATVILAMGDGRKAAKAIHEYLSK 473
dbj|BAA29970| (AP000004) 472aa long hypothetical glutamate synthase small chain
[Pyrococcus horikoshii]
Length = 472
Score = 80.0 bits (194), Expect = 2e-14
Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 55/336 (16%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPEL 63
K V ++G+GPAG+T A A+ K + E PGG + I + + I+ EL
Sbjct: 148 KGKVAVVGAGPAGLTCAGELAKMGYKVTIFEALHKPGGVL--AYGIPEFRLPKEILDHEL 205
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKL-EIPG 122
+ L+ LGVE DH K + ++ ++ I TGA KL IPG
Sbjct: 206 -----KKLKMLGVEIR-------TDHVVGKTVTLDELLQEYDAVFIGTGAGTPKLLNIPG 253
Query: 123 ---EEEYGARGV--------SY-CAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSV 170
+ Y A +Y D ++++VIG G++A++ A R G V
Sbjct: 254 ILLDRIYSANEFLTRINLMKAYEFPEYDTPIAVGKKVIVIGAGNTAMDAARSALRLGAEV 313
Query: 171 TIMHRRDK----LRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVK--- 222
TI +RR + R +EI + +EE + F + P+E GD+ +V++V ++ K
Sbjct: 314 TIAYRRGREDMTAREEEI---KHAEEEGVKFEFFLQPVEFIGDENGRVKAVKFERTKPLE 370
Query: 223 ------------TGEVTEKAFGGIFIYVGLDP--VAEFAGNLGITDEAGWIITDDHMRTS 268
TGE + I +GL+P + G L T+ G I+ D+++ TS
Sbjct: 371 ERDSKGKRKIVGTGEYVTLEADTVIIAIGLEPNKIITEDGRLK-TNPDGTIVVDENLMTS 429
Query: 269 LPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
+PG+FA GD + + + A+GDG +AA+ +++
Sbjct: 430 IPGVFAGGDAIRGE-ATVILAMGDGKRAAKAIDEYI 464
sp|P35484|DLDH_ACHLA DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE COMPLEX)
>gi|285175|pir||D42653 36K protein - Acholeplasma
laidlawii (fragment) >gi|141811 (M81753)
dihydrolipoamide dehydrogenase [Acholeplasma laidlawii]
Length = 336
Score = 79.6 bits (193), Expect = 3e-14
Identities = 85/333 (25%), Positives = 141/333 (41%), Gaps = 41/333 (12%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNN-----------TAEIENY 52
K+Y+++I+G GP G AA+ A+ K L+E+ V GG N +A++ N
Sbjct: 3 KEYEIIIVGGGPGGYVAAIKAAQYGAKVALVEKEVVGGICLNHGCIPTKTFLKSAKVFNT 62
Query: 53 PGYETIMGPELS-------MKMAEPLEGL--GVENAYGF------VTAIEDHGDYK---K 94
G S K+ +G+ + N F V GD K +
Sbjct: 63 VKKSMDFGVSTSGEVGFDWSKIVSRKDGVVKQLTNGVAFLLKKNGVDVYNGFGDIKSANE 122
Query: 95 IITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN-----QEILV 149
++ + TK++IIATG++ IPG +E +G+ V N + I++
Sbjct: 123 VVVNGESLKTKNVIIATGSSAVVPPIPGVKEAYEKGI----VVTSRELLNVKNYPKSIVI 178
Query: 150 IGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGD 209
+GGG VE A FG VTI+ D + R + + D + + K +
Sbjct: 179 VGGGVIGVEFATVFNSFGSKVTIIEMMDGILPTMDDDIRVAYAKTLKR--DGIEILTKAE 236
Query: 210 DKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSL 269
KKV G+ T I + VG ++ +LG+ + I T+++++T++
Sbjct: 237 VKKVDDHKVTYSLDGKETTIEGDLILMSVGTRANSKGLEHLGLEMDRANIKTNEYLQTNV 296
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
PG++A+GDV K F A +G A Q K
Sbjct: 297 PGVYAIGDVNGK-FMLAHVAEHEGITAVQHILK 328
sp|P08663|MERA_STAAU MERCURIC REDUCTASE (HG(II) REDUCTASE) >gi|79885|pir||E29504
mercury(II) reductase (EC 1.16.1.1) - Staphylococcus
aureus plasmid pI258 >gi|459907 (L29436) mercuric
reductase [Plasmid pI258]
Length = 547
Score = 77.6 bits (188), Expect = 1e-13
Identities = 81/313 (25%), Positives = 132/313 (41%), Gaps = 49/313 (15%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNNTAE 48
YD++IIGSG A +AA+ + K ++ERG G G++N A+
Sbjct: 86 YDLLIIGSGGAAFSAAIKANENGAKVAMVERGTVGGTCVNIGCVPSKTMLRAGEINGLAQ 145
Query: 49 IENYPGYETIMGPELSMKMAEPLEGLGVE-NAYGFVTAIEDHG-----------DYKKII 96
+ G +T G ++ E +GL + ++ IE++G D K I
Sbjct: 146 NNPFTGLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQ 205
Query: 97 TEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIGGGD 154
+KS +IATGA+ EIPG E V Y + Q + VIG G
Sbjct: 206 VNGQNITSKSFLIATGASPAVPEIPGMNE-----VDYLTSTSALELKEVPQRLAVIGSGY 260
Query: 155 SAVEEALYLTRFGQSVTIMHRRDKL------RAQEIIQQRAFKEEKINFIWDSVPMEIKG 208
A E G VT+M R ++L E I + + E+ +N I +++
Sbjct: 261 IAAELGQMFHNLGTEVTLMQRSERLFKTYDPEISEAIDE-SLTEQGLNLITGVTYQKVEQ 319
Query: 209 DDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGI-TDEAGWIITDDHM 265
+ K +Y V E +A + + G P E + G+ T + G ++T++++
Sbjct: 320 NGKSTS--IYIEVNGQEQVIEA-DQVLVATGRKPNTETLNLESAGVKTGKKGEVLTNEYL 376
Query: 266 RTSLPGIFAVGDV 278
+TS I+A GDV
Sbjct: 377 QTSNNRIYAAGDV 389
gb|AAD35227.1|AE001699_4 (AE001699) thioredoxin reductase-related protein [Thermotoga
maritima]
Length = 284
Score = 76.5 bits (185), Expect = 3e-13
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSMKM 67
V I+G+GPAG+ AA++ R + + E+ GG + N +EN P G E+ +
Sbjct: 3 VGIVGAGPAGVAAAVFLRRYNVHVTVFEKNRVGGLLRNAHLVENIPVLPPASGEEICKTL 62
Query: 68 AEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEEYG 127
+ L G E + V +E+ +KI+TE + +I+A+G R++ E
Sbjct: 63 EKRLFESGAELIWEEVVKVEN----EKILTEREIHSFDYVIVASGTIPRRI----PEFEV 114
Query: 128 ARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQ 187
+ V Y + F +++ + G GD+A + AL G+ V + +R ++RA ++ +
Sbjct: 115 SEKVVYEFIDLPEF---EKLAIYGAGDAAFDSALNALVRGKEVHLFNRGSRIRALPLLVE 171
Query: 188 RAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFA 247
RA K EK + ++++ + K V+ V T F + + VG P F
Sbjct: 172 RAKKYEKFYYHERCPILKVEEESKMVKLKTEHGVFT-------FDALLLSVGRLPNTSFV 224
Query: 248 GNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQE 299
E G F VGD R FRQ++ A+G + A E
Sbjct: 225 -------EPG------------ERNFIVGDAR-GGFRQVSIAMGSAIETAME 256
emb|CAB61613.1| (AL133210) putative reductase [Streptomyces coelicolor A3(2)]
Length = 311
Score = 76.1 bits (184), Expect = 4e-13
Identities = 72/302 (23%), Positives = 130/302 (42%), Gaps = 23/302 (7%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS 64
+YDVV++G G AG++AA+ RS ++TL+++ G P A ++ GY T G +
Sbjct: 16 RYDVVVVGGGAAGLSAALVLGRSRLRTLVVDAGEP-----RNAPSDHMQGYLTRDGMSPA 70
Query: 65 MKMA---EPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
+A E + GV+ + GD+ + D + +I+ TG +P
Sbjct: 71 EFLALGREEIARYGVDLVRDRAVDVSSDGDFAVELGGGDTVHARRLIVTTGLRDELPAVP 130
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTI-MHR-RDKL 179
G E R V +C C G R++ V+ +V +AL ++ + VT+ +H ++
Sbjct: 131 GVAERYGRDVLHCPFCHGWEVRDERFGVLASSPLSVHQALMVSGWSDDVTLFLHTVAERE 190
Query: 180 RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVG 239
+ + +++ A K+ VP E+ +V+ V+ + T +F+
Sbjct: 191 LSDDDLRRLAAAGVKV------VPGEVAA--LRVEDDRLTGVRLADGTAHDRTVVFVAPK 242
Query: 240 LDPVAEFAGNLGI----TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQ 295
P LG T + + D RTS+PG++ G+ Q+ A G +
Sbjct: 243 AVPQTGLMERLGAELQETPFGAYPVVDPTGRTSVPGVWTAGNA-MGFAEQVVHAASGGYR 301
Query: 296 AA 297
AA
Sbjct: 302 AA 303
emb|CAB49858.1| (AJ248286) GLUTAMATE SYNTHASE SMALL CHAIN [Pyrococcus abyssi]
Length = 474
Score = 76.1 bits (184), Expect = 4e-13
Identities = 89/336 (26%), Positives = 147/336 (43%), Gaps = 59/336 (17%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPELSMK 66
V +IG+GPAG+T A A+ + + E PGG + Y E + E+ K
Sbjct: 157 VAVIGAGPAGLTCAAELAKMGYEVTIFEALHEPGGVLA-------YGIPEFRLPKEIVKK 209
Query: 67 MAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDD---EFVTKSIIIATGANHRKL-EIPG 122
E L+ LGV+ IE + K +T ++ EF +I I TGA ++ PG
Sbjct: 210 EVEKLKRLGVK--------IETNVLVGKTVTFEELREEF--DAIFIGTGAGTPRIYPWPG 259
Query: 123 EEEYGARGVSYCAV------------CDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSV 170
G + D + + VIG G++A++ A R G V
Sbjct: 260 VNLNGIYSANEFLTRINLMKAYKFPEYDTPIKIGKRVAVIGAGNTAMDAARSALRLGAEV 319
Query: 171 TIMHRRDK----LRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVKTGE 225
I++RR + R +EI + +EE + F++ P GD+ ++++ + +K GE
Sbjct: 320 WILYRRTRKEMTAREEEI---KHAEEEGVKFMFLVSPKRFIGDENGNLKAIELEKMKLGE 376
Query: 226 VTEKA--------------FGGIFIYVGLDPVAEFAGNLGI--TDEAGWIITDDHMRTSL 269
E F I +G P F + DE G II D+++ TS+
Sbjct: 377 PDETGRRRPIPTGETFVMEFDTAIIAIGQTPNKTFLQTVPELKVDEKGRIIVDENLMTSI 436
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVA 305
PG+FA GD + + + A+GDG +AA+ +K+++
Sbjct: 437 PGVFAGGDAIRGE-ATVILAMGDGRKAAKAIHKYLS 471
dbj|BAA30995.1| (AP000007) 476aa long hypothetical glutamate synthase small chain
[Pyrococcus horikoshii]
Length = 476
Score = 75.7 bits (183), Expect = 5e-13
Identities = 87/337 (25%), Positives = 150/337 (43%), Gaps = 58/337 (17%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPELSMK 66
V +IG+GPAG+T A A+ + E PGG + Y E + E+ K
Sbjct: 157 VAVIGAGPAGLTCAAELAKMGYDVTIYEALHEPGGVLA-------YGIPEFRLPKEILRK 209
Query: 67 MAEPLEGLGV----ENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKL-EIP 121
+ L LGV ++ G I + ++ E D +I I TGA KL +IP
Sbjct: 210 ELKKLSILGVKIKTDHIVGRTVTIPE------LLKEYD-----AIFIGTGAGTPKLLKIP 258
Query: 122 GEEEYGARGVSYCAV------------CDGAFFRNQEILVIGGGDSAVEEALYLTRFGQS 169
G G + D + ++VIG G++A++ A R G
Sbjct: 259 GINLNGIYSANEFLTRINLMKAYKFPEYDTPIIVGKRVIVIGAGNTAMDAARSALRLGAE 318
Query: 170 VTIMHRR-DKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVK----- 222
V I +RR ++ I + + KEE + F++ P+E GD+ +V++V ++ +K
Sbjct: 319 VIIAYRRGEEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDENGRVKAVKFEKMKPLEER 378
Query: 223 ----------TGEVTEKAFGGIFIYVGLDP---VAEFAGNLGITDEAGWIITDDHMRTSL 269
TGE + I +G P + + L + E G I+ D+++ TS+
Sbjct: 379 DSRGKRKIIGTGEYVTVETDTVVIAIGQTPNRIIWKTTPGLKVR-ENGTIVVDENLMTSI 437
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAE 306
PG+FA GD + + + A+GDG +AA+ ++++++
Sbjct: 438 PGVFAGGDAIRGE-ATVILAMGDGRKAAKAIHEYLSK 473
sp|P75393|DLDH_MYCPN DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE COMPLEX)
>gi|2146099|pir||S73774 dihydrolipoamide dehydrogenase
(EC 1.8.1.4) pdhD - Mycoplasma pneumoniae (SGC3) (ATCC
29342) >gi|1674136 (AE000044) Mycoplasma pneumoniae,
dihydrolipoamide dehydrogenase; similar to Swiss-Prot
Accession Number P11959, from B. stearothermophilus
[Mycoplasma pneumoniae]
Length = 457
Score = 74.9 bits (181), Expect = 8e-13
Identities = 78/313 (24%), Positives = 133/313 (41%), Gaps = 53/313 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNT-----------AEIENY-- 52
YD++IIG+GPAG AA Y + ++KTL++E+ GG N A+I +Y
Sbjct: 3 YDLIIIGAGPAGYVAAEYAGKHKLKTLVVEKEYFGGVCLNVGCIPTKTLLKRAKIVDYLR 62
Query: 53 --PGYETIMGPELSMKMAEPLEGLG--VENAYGFVTAIEDHGDYKKIITE---------- 98
Y + ++++ + LE G V G V AI + ++ E
Sbjct: 63 HAQDYGISINGQVALNWNQLLEQKGKVVSKLVGGVKAIIASAKAETVMGEAKVLDPNTVE 122
Query: 99 --DDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE-----ILVIG 151
+ TKSI++ATG+ R L +PG E G V D + E ++V+G
Sbjct: 123 VAGKTYTTKSIVVATGSRPRYLTLPGFAEARQNGF----VIDSTQALSLEGVPRKLVVVG 178
Query: 152 GGDSAVEEALYLTRFGQSVTIMHRRDKL------RAQEIIQQRAFKEEKINFIWDSVPME 205
GG +E A G VTI+ D++ +++ + + + + I ++
Sbjct: 179 GGVIGIEFAFLYASLGSEVTILQGVDRILEIFDTEVSDLVA-KLLQTKNVKIITNAQVTR 237
Query: 206 IKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGIT-DEAGWIITDDH 264
++ V Y + G+ I + +G P E L + DE I+ +
Sbjct: 238 ANNNE-----VFYS--QNGQEGSVVGDRILVSIGRIPNTECLDGLNLQRDERNRIVLNQD 290
Query: 265 MRTSLPGIFAVGD 277
++TS+P I+ VGD
Sbjct: 291 LQTSIPNIYIVGD 303
pir||JC4089 3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-oxidoreductase
(EC 1.2.1.40) - Saccharopolyspora erythraea >gi|603923
(L38646) NADH-ferredoxin oxidoreductase
[Saccharopolyspora erythraea]
Length = 456
Score = 73.7 bits (178), Expect = 2e-12
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 51/316 (16%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQ-----------MNNTAEI 49
MT+ D+VI+G G G A A + +L+E+ GG + + AE+
Sbjct: 1 MTDTSADLVILGGGSGGYACAFRAAELGLSVVLIEKDKLGGTCLHRGCIPTKALLHAAEV 60
Query: 50 ENYPGYETIMGPELSMKMAEPLEGLGVENAYGF--------------------VTAIEDH 89
+ G + +K + LEG+ + + +T +E
Sbjct: 61 AD----SARDGDQFGVKTS--LEGIDIAGVNSYKDGVVSKLYKGVQGLFKAHKITVVEGA 114
Query: 90 G---DYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE 146
G D K + + + +++++ATG+ + L PG E G S A+ F ++
Sbjct: 115 GTLVDAKTVRVDGTRYTGRNVVLATGSYSKSL--PGLELGGRVIASEQAL--NLDFVPEK 170
Query: 147 ILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL--RAQEIIQQRAFKEEKINFIWDSVPM 204
++V+GGG VE A FG VTI+ L E I +R +E + I +
Sbjct: 171 VVVLGGGVIGVEFASVWRSFGAEVTIVEALPHLVPNEDEFISKRLEREFRKRGIKFKTEV 230
Query: 205 EIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGITDEAGWIITD 262
+ G + + V + ++ G+ + + + VG P G G+T E G++ TD
Sbjct: 231 KFTGAQQSAEGVSVR-LENGDQYDADL--LLVAVGRGPNTAALGFEEAGVTMERGFVRTD 287
Query: 263 DHMRTSLPGIFAVGDV 278
D +RTS+ G++AVGD+
Sbjct: 288 DRLRTSVDGVYAVGDI 303
gb|AAD43039.1|AF108213_1 (AF108213) NADPH-dependent thioredoxin reductase [Rattus
norvegicus]
Length = 496
Score = 73.4 bits (177), Expect = 2e-12
Identities = 87/353 (24%), Positives = 142/353 (39%), Gaps = 64/353 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
+D++IIG G G+ AA A+ + K ++L+ P GG N I ++
Sbjct: 13 FDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNGGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELS-----------------MKMAEPLEGLGVENAYGFVTAIEDH--------- 89
++G L KM E ++ +G+ A+ +
Sbjct: 73 AALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYG 132
Query: 90 ---GDYKKIIT----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF- 141
G +K + T ++ + + +IATG R L IPG++EY C D F
Sbjct: 133 KFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEY-------CISSDDLFS 185
Query: 142 --FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFKEEKI 195
+ + LV+G A+E A +L G VT+M R LR Q++ + +E I
Sbjct: 186 LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGI 245
Query: 196 NFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG---- 248
FI VP +I+ + V K+ + E E F + + VG D G
Sbjct: 246 KFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETV 305
Query: 249 NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 306 GVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
gi|3582500 (U63923) thioredoxin reductase [Rattus rattus]
>gi|6942216|gb|AAF32362.1|AF220760_1 (AF220760)
thioredoxin reductase 1 [Rattus norvegicus]
Length = 498
Score = 73.4 bits (177), Expect = 2e-12
Identities = 87/353 (24%), Positives = 142/353 (39%), Gaps = 64/353 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
+D++IIG G G+ AA A+ + K ++L+ P GG N I ++
Sbjct: 13 FDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNGGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELS-----------------MKMAEPLEGLGVENAYGFVTAIEDH--------- 89
++G L KM E ++ +G+ A+ +
Sbjct: 73 AALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYG 132
Query: 90 ---GDYKKIIT----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF- 141
G +K + T ++ + + +IATG R L IPG++EY C D F
Sbjct: 133 KFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEY-------CISSDDLFS 185
Query: 142 --FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFKEEKI 195
+ + LV+G A+E A +L G VT+M R LR Q++ + +E I
Sbjct: 186 LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGI 245
Query: 196 NFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG---- 248
FI VP +I+ + V K+ + E E F + + VG D G
Sbjct: 246 KFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETV 305
Query: 249 NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 306 GVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
gb|AAF15900.1|AF208018_1 (AF208018) thioredoxin reductase [Homo sapiens]
Length = 497
Score = 72.2 bits (174), Expect = 5e-12
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ K ++L+ G P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEPAQYGKKVMVLDFGTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELSM-----------------KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK++ E
Sbjct: 73 AALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALRE----KKVVYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ +F+ + +IATG R L IPG++EY C D
Sbjct: 129 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHME 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + VV ++ + E+ E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIG 301
Query: 249 ----NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 358
gi|406456 (U02197) Homology to thioredoxin reductase M60116 [Mycoplasma
genitalium]
Length = 107
Score = 71.8 bits (173), Expect = 7e-12
Identities = 29/62 (46%), Positives = 46/62 (73%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YD+VI+G+GPAG+ +A+Y R+ + ++E PGG++ T +ENYPG++TI GPEL +
Sbjct: 1 YDLVIVGAGPAGIASAIYGKRANLNLAIIEGNTPGGKIVKTNIVENYPGFKTITGPELGL 60
Query: 66 KM 67
+M
Sbjct: 61 EM 62
dbj|BAA86985.1| (AB027565) thioredoxin reductase 1 [Mus musculus]
Length = 499
Score = 71.4 bits (172), Expect = 9e-12
Identities = 86/353 (24%), Positives = 142/353 (39%), Gaps = 64/353 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
+D++IIG G G+ AA A+ + K L+L+ P GG N I ++
Sbjct: 13 FDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELS-----------------MKMAEPLEGLGVENAYGFVTAIEDH--------- 89
++G L KM E ++ +G+ A+ +
Sbjct: 73 AALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENAYG 132
Query: 90 ---GDYKKIIT----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF- 141
G ++ + T ++ + + +IATG R L IPG++EY C D F
Sbjct: 133 RFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSDDLFS 185
Query: 142 --FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFKEEKI 195
+ + LV+G A+E A +L G VT+M R LR Q++ + +E I
Sbjct: 186 LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGI 245
Query: 196 NFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG---- 248
FI VP +I+ + V ++ + E E F + + VG D G
Sbjct: 246 KFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTIGLETV 305
Query: 249 NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 306 GVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
sp|P90597|DLDH_TRYCR DIHYDROLIPOAMIDE DEHYDROGENASE >gi|1841947|emb|CAA61483| (X89112)
dihydrolipoamide dehydrogenase [Trypanosoma cruzi]
Length = 477
Score = 71.0 bits (171), Expect = 1e-11
Identities = 93/353 (26%), Positives = 144/353 (40%), Gaps = 80/353 (22%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQMNNTAEI--------------- 49
YDVV+IG GP G A++ A+ MKT +E RG GG N I
Sbjct: 12 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHVYHDA 71
Query: 50 -ENYPGYETIMGPELSMKMAE-------PLEGL--GVENAY--GFVTAIEDHGDYKK--- 94
N+ Y + G ++M A+ ++GL GVE + VT + G ++
Sbjct: 72 HANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHS 131
Query: 95 -----IITEDDEFVTKSIIIATGANHRKLE-IPGEEEYGARGVSYCAVCDGAFFRNQEIL 148
+ + + F TK IIATG+ +L +P +E+ A+ + ++
Sbjct: 132 IRVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVP----KTMV 187
Query: 149 VIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR------AQEIIQQRAFKEEKINFI---- 198
VIGGG +E R G VT++ + + K EK+ F+
Sbjct: 188 VIGGGVIGLELGSVWARLGAKVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTK 247
Query: 199 -------WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLG 251
DSV +E++G KN K VT +A + + VG P F G LG
Sbjct: 248 VVGGTNNGDSVSLEVEG----------KNGKRETVTCEA---LLVSVGRRP---FTGGLG 291
Query: 252 I------TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
+ +E G++ DH TS+P ++A+GDV K A +G A+
Sbjct: 292 LDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAE 344
ref|NP_003321.1|| thioredoxin reductase 1 >gi|2500118|sp|Q16881|TRXB_HUMAN
THIOREDOXIN REDUCTASE >gi|2136270|pir||S66677
thioredoxin reductase - human >gi|1184537|bbs|172316
(S79851) thioredoxin reductase {EC 1.6.4.5} [human,
placenta, Peptide, 497 aa] [Homo sapiens]
>gi|1237038|emb|CAA62629| (X91247) thioredoxin reductase
(NADPH) [Homo sapiens]
Length = 497
Score = 71.0 bits (171), Expect = 1e-11
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ K ++L+ P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELSM-----------------KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK++ E
Sbjct: 73 AALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALRE----KKVVYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ +F+ +S +IATG R L IPG++EY C D
Sbjct: 129 NAYGQFIGPHRIKATNNKGKEKIYSAESFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLGVTVMVRSILLRGFDQDMANKIGEHME 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + VV ++ + E+ E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIG 301
Query: 249 ----NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 358
sp|O62768|TRXB_BOVIN THIOREDOXIN REDUCTASE
Length = 499
Score = 69.9 bits (168), Expect = 3e-11
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ + K ++L+ P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEAAKYDKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELS-----------------MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK+ E
Sbjct: 73 AALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVALRE----KKVTYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ EFV + +IATG R L IPG++EY C D
Sbjct: 129 NAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMQ 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + V+ K+ + + E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVIAKSTDSDQTIEGEYNTVLLAIGRDACTRKIG 301
Query: 249 --NLG--ITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
N+G I ++ G I + +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LENVGVKINEKTGKIPVTEEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
gi|3323040 (AE001245) glutamate synthase (gltA) [Treponema pallidum]
Length = 518
Score = 69.9 bits (168), Expect = 3e-11
Identities = 84/337 (24%), Positives = 143/337 (41%), Gaps = 47/337 (13%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMG 60
T KK V +IGSGPAG+ A TAR+ + E PGG + Y E +
Sbjct: 195 THKK--VAVIGSGPAGLAVASDTARAGHSVTVFEALHKPGG-------VVTYGIPEFRLP 245
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGAN-HRKLE 119
E+ + E L+ +GV F+ G + ++ ++ I TGA R +
Sbjct: 246 KEVVVTEIETLKKMGVTFRMNFLV-----GRTATLEQLFSQYGFDAVFIGTGAGLPRFMN 300
Query: 120 IPGEEEYGARGVSY------------CAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFG 167
I GEE G + A D + + ++V+GGG+ AV+ + R G
Sbjct: 301 IEGEELCGVFAANDYLTRATLMKAYDTAHADTPVYAAKSVVVVGGGNVAVDSSRTALRLG 360
Query: 168 -QSVTIMHRRDKLRAQEIIQQRAFKEEK-INFIWDSVPMEIKGDDK-KVQSVVYKN---- 220
+ V ++R+ + +++ A E++ + F + I GD++ V++VV+++
Sbjct: 361 AEQVHCLYRKTRADMTACVEEIAQAEDEGVTFHFLCQTTRILGDEEGNVRAVVFRDCQEQ 420
Query: 221 VKTGEVTEKAFGGIFIYVGLDPVAEFAGNLG-----------ITDEAGWIITDDHMRTSL 269
+ GE G + D V GN E G I+ D+ RTS+
Sbjct: 421 IDAGERVFLPCGDAECKLAADAVIVAVGNGSNPLMAKTTRSLAVSERGTIVVDEDQRTSI 480
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAE 306
PG++A GD+ + A+G G +AA ++A+
Sbjct: 481 PGVWAGGDI-VLGAATVIRAMGQGRRAAASINAYLAQ 516
gi|2997700 (AF053984) thioredoxin reductase [Bos taurus]
Length = 499
Score = 69.9 bits (168), Expect = 3e-11
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ + K ++L+ P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEAAKYDKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELS-----------------MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK+ E
Sbjct: 73 AALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVALRE----KKVTYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ EFV + +IATG R L IPG++EY C D
Sbjct: 129 NAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMQ 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + V+ K+ + + E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVIAKSTDSDQTIEGEYNTVLLAIGRDACTRKIG 301
Query: 249 --NLG--ITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
N+G I ++ G I + +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LENVGVKINEKTGKIPVTEEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLY 358
gi|3820535 (AF077367) thioredoxin reductase GRIM-12 [Homo sapiens]
Length = 497
Score = 69.5 bits (167), Expect = 4e-11
Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ K ++L+ P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELSM-----------------KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK++ E
Sbjct: 73 AALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALRE----KKVVYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ +F+ + +IATG R L IPG++EY C D
Sbjct: 129 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G +VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLNVTVMVRSILLRGFDQDMANKIGEHME 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + VV ++ + E+ E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIG 301
Query: 249 ----NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 358
gb|AAD18970| (AE001663) Lipoamide Dehydrogenase [Chlamydia pneumoniae]
>gi|6672028|dbj|BAA88651.1| (AB035943) lipoamide
dehydrogenase [Chlamydophila pneumoniae]
Length = 461
Score = 69.1 bits (166), Expect = 5e-11
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 52/318 (16%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIEN------------ 51
+++D V+IG+GP+G AA+ A+S+++T L+E GG N I +
Sbjct: 3 QEFDCVVIGAGPSGYVAAITAAQSKLRTALIEEDQAGGTCLNRGCIPSKALIAGANVVSH 62
Query: 52 ----------YPGYETIMGPELSMKMAEPLEGL--GVENAY--GFVTAIEDHGDYK---- 93
GY TI P ++ + ++G+ G+E +T ++ G
Sbjct: 63 IKHAEQFGIHVDGY-TIDYPAMAKRKNTVVQGIRQGLEGLIRSNKITVLKGTGSLVSSTE 121
Query: 94 -KIITEDDEFVTKS-IIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIG 151
K+I +D + + II+ATG+ R PG + +R +S + + +++ +IG
Sbjct: 122 VKVIGQDTTIIKANHIILATGSEPRPF--PGVP-FSSRILSSTGILELEVLP-KKLAIIG 177
Query: 152 GGDSAVEEALYLTRFGQSVTIMHRRDKLRA---QEIIQQ--RAFKEEKINFIWDSVPMEI 206
GG E A G +T++ D + A +E+ Q F ++ I + + I
Sbjct: 178 GGVIGCEFASLFHTLGVEITVIEALDHILAVNNKEVSQTVTNKFTKQGIRILTKASISAI 237
Query: 207 KGDDKKVQSVVYKNVKTGEVTEKAFGGIF--IYVGLDPVAEFAGNLG-ITDEAGWIITDD 263
+ +V+ V V+ + A G F +GLD N G I D+ G I D+
Sbjct: 238 EESQNQVRITVNDQVEEFDYVLVAIGRQFNTASIGLD-------NAGVIRDDRGVIPVDE 290
Query: 264 HMRTSLPGIFAVGDVRQK 281
MRT++P I+A+GD+ K
Sbjct: 291 TMRTNVPNIYAIGDITGK 308
emb|CAA04503| (AJ001050) thioredoxin reductase [Homo sapiens]
Length = 497
Score = 69.1 bits (166), Expect = 5e-11
Identities = 85/357 (23%), Positives = 145/357 (39%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ K ++L+ P GG N I ++
Sbjct: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
Query: 57 T-IMGPELSM-----------------KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK++ E
Sbjct: 73 AALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALRE----KKVVYE 128
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ +F+ + +IATG R L IPG++EY C D
Sbjct: 129 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 181
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 182 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHME 241
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + VV ++ + E+ E + + + +G D G
Sbjct: 242 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIG 301
Query: 249 ----NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 302 LETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 358
dbj|BAA13674| (D88687) KM-102-derived reductase-like factor [Homo sapiens]
Length = 549
Score = 69.1 bits (166), Expect = 5e-11
Identities = 85/357 (23%), Positives = 145/357 (39%), Gaps = 72/357 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G+ AA A+ K ++L+ P GG N I ++
Sbjct: 65 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 124
Query: 57 T-IMGPELSM-----------------KMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE 98
++G L +M E ++ +G+ A+ + KK++ E
Sbjct: 125 AALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALRE----KKVVYE 180
Query: 99 D--DEFV------------------TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCD 138
+ +F+ + +IATG R L IPG++EY C D
Sbjct: 181 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEY-------CISSD 233
Query: 139 GAF---FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQ--RAFK 191
F + + LV+G A+E A +L G VT+M R LR Q++ + +
Sbjct: 234 DLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHME 293
Query: 192 EEKINFIWDSVPMEIKGDDKKVQS---VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
E I FI VP++++ + VV ++ + E+ E + + + +G D G
Sbjct: 294 EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIG 353
Query: 249 ----NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I ++ G I D +T++P I+A+GD+ + AI G AQ Y
Sbjct: 354 LETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 410
gb|AAD51325.1|AF171055_1 (AF171055) thioredoxin reductase TR2 [Homo sapiens]
Length = 579
Score = 67.9 bits (163), Expect = 1e-10
Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 66/354 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G++ A A K ++L+ VP GG N I ++
Sbjct: 93 YDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQ 152
Query: 57 TIM-----------GPELSMKMAEPLEGLGV------------------ENAYGFVTAIE 87
+ G E + ++ E + E A +V +
Sbjct: 153 AALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYG 212
Query: 88 DHGDYKKIIT-----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF- 141
+ ++ KI ++ + +IATG R L I G++EY C D F
Sbjct: 213 EFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEY-------CITSDDLFS 265
Query: 142 --FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQRA--FKEEKI 195
+ + LV+G A+E A +L FG VT+M R LR QE+ ++ ++ +
Sbjct: 266 LPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGV 325
Query: 196 NFIWDSVPMEI----KGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--- 248
F+ +P+ + KG K++ V+ K+ + E E + + + +G D G
Sbjct: 326 KFLRKFIPVMVQQLEKGSPGKLK-VLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEK 384
Query: 249 -NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I +++G I +D +T++P ++AVGD+ + AI G AQ +
Sbjct: 385 IGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLF 438
emb|CAA73084| (Y12481) glutamine--pyruvate aminotransferase [Rhodobacter
sphaeroides]
Length = 413
Score = 67.9 bits (163), Expect = 1e-10
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 53/340 (15%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPE 62
E+ V IIG+GP G+ AA R+ ++ + +R G + PG++ + +
Sbjct: 84 ERSESVGIIGAGPGGLAAADALRRAGLQVTVYDRYDRAGGLLT----YGIPGFK--LEKD 137
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGA-NHRKLEIP 121
+ + E LE GV+ + + + + I + D +++IATG R L P
Sbjct: 138 VVARRVEQLEQAGVQ--FVLNCNVGEDLSFDAIRGQHD-----AVLIATGVYKQRDLAAP 190
Query: 122 GEEEYG-ARGVSYCAVC-----------DGAFFRNQEILVIGGGDSAVEEALYLTRFG-Q 168
G G + +SY DG + ++VIGGGD+A++ R G
Sbjct: 191 GVGSAGVVQALSYLTASNRRSFGDEVDDDGLDASGKRVVVIGGGDTAMDCVRTAIRQGAT 250
Query: 169 SVTIMHRRDKLRAQEIIQQRA-FKEEKINFIWDSVPME-IKGDDKKVQSVVYKNVKTGE- 225
SV ++RRD+ ++ A +EE + F+W S P I GD V+ V+ + ++ GE
Sbjct: 251 SVKCLYRRDRANMPGSQREVANAEEEGVEFVWLSAPRGFIAGD--AVEGVIVQKMRLGEP 308
Query: 226 ------VTEKAFGGIFI--------YVGLDPVAEFAGNLGITD----EAGWIITDDHMR- 266
+ E G ++ +G +P + G+ D G I D
Sbjct: 309 DATGRQMPEIIEGADYVEPADLAIMALGFEP-EDLPTLWGVPDLTVTRWGTIKADFRTHA 367
Query: 267 TSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAE 306
TSLPG++AVGD+ + + AI DG AAQ ++A+
Sbjct: 368 TSLPGVYAVGDI-VRGASLVVWAIRDGRDAAQSILDYLAQ 406
gi|2648692 (AE000975) NADH oxidase (noxA-5) [Archaeoglobus fulgidus]
Length = 448
Score = 67.5 bits (162), Expect = 1e-10
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 46/303 (15%)
Query: 5 KYDVVIIGSGPAGMTAA-----MYTARS-----EMKTLLLERGVPGGQMNNTAEIENYPG 54
KYDV+IIG GPAG+ A Y A+S + +T L+ G+P
Sbjct: 5 KYDVLIIGGGPAGIVTATTAKKFYPAKSVAIIKKEETSLVPCGIP-------------YI 51
Query: 55 YETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-TEDDEFVT-KSIIIATG 112
++T+ E + +P E LG+E + +ED K++ T+ + ++ + ++ ATG
Sbjct: 52 FKTLGSVEADVMPTKPAENLGIE---FIIDEVEDVDVKAKVVRTKGGKSISYEKLVFATG 108
Query: 113 ANHRKLEIPGEEEYG----ARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQ 168
+ I G E+ G ++ + A + ++++++GGG VE + + G+
Sbjct: 109 STPVMPRIEGVEKKGVFTVSKNIEELRKLHEAVKKAEKVVIVGGGFIGVEVGEQIAKAGK 168
Query: 169 SVTIMHRRDKLRAQEI------IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVK 222
T++ D+L I + K+ + +S I G+ SV +
Sbjct: 169 KFTMVEMMDQLLPAAFDKEFARIAEEELKKLGVEVYLNSTVKRITGN----SSVEAVELA 224
Query: 223 TGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAG-WIITDDHMRTSLPGIFAVGDV-RQ 280
G E + + VG P E A G+ G I TD++ RTS +FAVGD +
Sbjct: 225 DGRKIEADV--VIMSVGYRPNIELAKKAGLRISIGNRIWTDEYGRTSEKDVFAVGDCSEE 282
Query: 281 KDF 283
KDF
Sbjct: 283 KDF 285
emb|CAA72132| (Y11262) dihydrolipoamide dehydrogenase [Trypanosoma cruzi]
Length = 477
Score = 67.5 bits (162), Expect = 1e-10
Identities = 91/353 (25%), Positives = 143/353 (39%), Gaps = 80/353 (22%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQMNNTAEI--------------- 49
YDVV+IG GP G A++ A+ MKT +E RG GG N I
Sbjct: 12 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDA 71
Query: 50 -ENYPGYETIMGPELSMKMAE-------PLEGL--GVENAY--GFVTAIEDHGDYKK--- 94
N+ Y + G ++M A+ ++GL GVE + VT + G ++
Sbjct: 72 HANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHS 131
Query: 95 -----IITEDDEFVTKSIIIATGANHRKLE-IPGEEEYGARGVSYCAVCDGAFFRNQEIL 148
+ + + TK IIATG+ +L +P +E+ A+ + ++
Sbjct: 132 IRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVP----KTMV 187
Query: 149 VIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR------AQEIIQQRAFKEEKINFI---- 198
VIGGG +E R G VT++ + + K EK+ F+
Sbjct: 188 VIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTK 247
Query: 199 -------WDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLG 251
DSV +E++G KN + VT +A + + VG P F G LG
Sbjct: 248 VVGGTNNGDSVSLEVEG----------KNGRRETVTCEA---LLVSVGRRP---FTGGLG 291
Query: 252 I------TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
+ +E G++ DH TS+P ++A+GDV K A +G A+
Sbjct: 292 LDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAE 344
gb|AAD39929.1|AF133519_1 (AF133519) thioredoxin reductase 3 [Homo sapiens]
Length = 577
Score = 67.1 bits (161), Expect = 2e-10
Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 66/354 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTAEIENYPGYE 56
YD++IIG G G++ A A K ++L+ VP GG N I ++
Sbjct: 91 YDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQ 150
Query: 57 TIM-----------GPELSMKMAEPLEGLGV------------------ENAYGFVTAIE 87
+ G E + ++ E + E A +V +
Sbjct: 151 AALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYG 210
Query: 88 DHGDYKKIIT-----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF- 141
+ ++ KI ++ + +IATG R L I G++EY C D F
Sbjct: 211 EFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEY-------CITSDDLFS 263
Query: 142 --FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA--QEIIQQRA--FKEEKI 195
+ + LV+G A+E A +L FG VT+M R LR QE+ ++ ++ +
Sbjct: 264 LPYCPGKPLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGV 323
Query: 196 NFIWDSVPMEI----KGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--- 248
F+ +P+ + KG K++ V+ K+ + E E + + + +G D G
Sbjct: 324 KFLRKFIPVMVQQLEKGSPGKLK-VLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEK 382
Query: 249 -NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ I +++G I +D +T++P ++AVGD+ + AI G AQ +
Sbjct: 383 IGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLF 436
sp|P23189|GSHR_PSEAE GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|94772|pir||S15236
glutathione reductase (NADPH) (EC 1.6.4.2) - Pseudomonas
aeruginosa >gi|45326|emb|CAA38122| (X54201) glutathione
reductase (NADPH) [Pseudomonas aeruginosa]
Length = 451
Score = 66.7 bits (160), Expect = 2e-10
Identities = 84/344 (24%), Positives = 135/344 (38%), Gaps = 69/344 (20%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
+D+ +IG+G G+ AA + A + + E GG N + P + G S
Sbjct: 5 FDLFVIGAGSGGVRAARFAAGFGARVAVAESRYLGGTCVNVGCV---PKKLLVYGAHFS- 60
Query: 66 KMAEPLEGLGVENAYGF-----------------------------------VTAIEDHG 90
E AYG+ VT +E H
Sbjct: 61 ------EDFEQARAYGWSAGEAQFDWATLIGNKNREIQRLNGIYRNLLVNSGVTLLEGHA 114
Query: 91 ---DYKKIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQ-- 145
D + + F K I++ATG + +IPG+E + + AFF +
Sbjct: 115 RLLDAHSVEVDGQRFSAKHILVATGGWPQVPDIPGKE--------HAITSNEAFFLERLP 166
Query: 146 -EILVIGGGDSAVEEALYLTRFGQSVTIMHRRDK-LRAQEIIQQRAFKEEKINFIWD-SV 202
+LV+GGG AVE A G T+++RRD LR + + ++E D
Sbjct: 167 RRVLVVGGGYIAVEFASIFNGLGAETTLLYRRDLFLRGFDRSVREHLRDELGKKGLDLQF 226
Query: 203 PMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG----NLGITDEAGW 258
+I DK+ + +K G V E +F G P+ + G + +TD+ G+
Sbjct: 227 NSDIARIDKQADGSLAATLKDGRVLEA--DCVFYATGRRPMLDDLGLENTAVKLTDK-GF 283
Query: 259 IITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
I D+H +TS P I A+GDV + + A+ +G A+ +K
Sbjct: 284 IAVDEHYQTSEPSILALGDVIGR-VQLTPVALAEGMAVARRLFK 326
emb|CAA72131| (Y11261) dihydrolipoamide dehydrogenase [Trypanosoma cruzi]
Length = 477
Score = 66.3 bits (159), Expect = 3e-10
Identities = 91/353 (25%), Positives = 142/353 (39%), Gaps = 80/353 (22%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQMNNTAEI--------------- 49
YDVV+IG GP G A++ A+ MKT +E RG GG N I
Sbjct: 12 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDA 71
Query: 50 -ENYPGYETIMGPELSMKMAE-------PLEGL--GVENAY--GFVTAIEDHGDYKK--- 94
N+ Y + G ++M A+ ++GL GVE + VT + G ++
Sbjct: 72 HANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHS 131
Query: 95 -----IITEDDEFVTKSIIIATGANHRKLE-IPGEEEYGARGVSYCAVCDGAFFRNQEIL 148
+ + + TK IIATG+ +L +P +E+ A+ + ++
Sbjct: 132 IRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVP----KTMV 187
Query: 149 VIGGGDSAVEEALYLTRFGQSVTIMHRRDKLR------AQEIIQQRAFKEEKINFIWD-- 200
VIGGG +E R G VT++ + + K EK+ F+
Sbjct: 188 VIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTK 247
Query: 201 ---------SVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLG 251
SV +E++G KN K VT +A + + VG P F G LG
Sbjct: 248 VVGGTNNGGSVSLEVEG----------KNGKRETVTCEA---LLVSVGRRP---FTGGLG 291
Query: 252 I------TDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQ 298
+ +E G++ DH TS+P ++A+GDV K A +G A+
Sbjct: 292 LDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAE 344
dbj|BAA08961| (D50453) homologue of thioredoxin reductase of Mycoplama genitalium
[Bacillus subtilis]
Length = 179
Score = 66.0 bits (158), Expect = 4e-10
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 147 ILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEI 206
+++ GGGD+AV+ A L SVT++HRR++ E + K+ + + ++
Sbjct: 1 MVISGGGDTAVDWANELEPIAASVTVVHRREEFGGMESSVTK-MKQSSVRVLTPYRLEQL 59
Query: 207 KGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVG----LDPVAEFAGNLGITDEAGWIITD 262
GD++ ++SV + ++G+ + + I G L P+ E+ G+ E G + D
Sbjct: 60 NGDEEGIKSVTVCHTESGQRKDIEIDELIINHGFKIDLGPMMEW----GLEIEEGRVKAD 115
Query: 263 DHMRTSLPGIFAVGDVR--QKDFRQITTAIGDGAQAAQEAYKFV 304
HMRT+LPG+F GD + R I +G A A ++
Sbjct: 116 RHMRTNLPGVFVAGDAAFYESKLRLIAGGFTEGPTAVNSAKAYL 159
gb|AAD36503.1|AE001795_6 (AE001795) oxidoreductase, putative [Thermotoga maritima]
Length = 403
Score = 65.6 bits (157), Expect = 5e-10
Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 31/323 (9%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGY----ETIMG 60
+ DV++IG+G AGM AA+ + LL+ER G + N I N G + + G
Sbjct: 2 RVDVMVIGAGAAGMAAALKAKEEGAEVLLVERDERTGGILNQC-IHNGFGLHYFRQELTG 60
Query: 61 PELSMKMAEPLEGLGVE---NAYGFVTAIEDHGDYKKIITED--DEFVTKSIIIATGANH 115
PE + + E +E +G+ NAY V +ED ++TE +E +++ ATGA
Sbjct: 61 PEYAERFQEKMEKMGIRALTNAY--VKRVEDRRVI--LVTEQGIEEVEVGALVYATGARE 116
Query: 116 R---KLEIPGEEEYG--ARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSV 170
R L IPG+ G GV+ + + L++G GD + A LT G V
Sbjct: 117 RPFGSLMIPGDRPSGIFTAGVAQRLINIENRLPGKRALILGSGDIGLIMARRLTLEGMEV 176
Query: 171 TIMHRRDKLRA---QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYK---NVKTG 224
+ R + +IQ ++ I S +E++G ++ + VV K +
Sbjct: 177 VGVVERLPYAGGLLRNVIQ--CLEDYNIPLYLSSTVVEVRGRERLEEVVVAKVDEQFRPI 234
Query: 225 EVTEKAF--GGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHM-RTSLPGIFAVGDVRQK 281
TE+ F + + VGL P E NL + + + ++ +TS IF+ G+
Sbjct: 235 PRTERVFKVDTLVLSVGLIPQVELIENLVVKNPTSRGVGVSNIGQTSRDWIFSAGNC-TV 293
Query: 282 DFRQITTAIGDGAQAAQEAYKFV 304
F + +G A + A KFV
Sbjct: 294 IFDLVDYVSYEGETAGRYAAKFV 316
gb|AAD35836.1|AE001745_3 (AE001745) oxidoreductase [Thermotoga maritima]
Length = 358
Score = 65.2 bits (156), Expect = 7e-10
Identities = 73/281 (25%), Positives = 127/281 (44%), Gaps = 24/281 (8%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSMKM 67
VVI+G+GP G+ A + T++ VP T + ++ Y + E S+
Sbjct: 3 VVIVGNGPGGVELAKQLSEEHEVTIVERETVP----YYTKPMLSH--YVAGLAEEKSL-F 55
Query: 68 AEPL---EGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG-E 123
P+ E G++ G TA + K + T+ +++ATGA R L+IPG E
Sbjct: 56 PYPIDWYEKKGIKLLLG-TTAKRIDAEKKVLETDRGTLEYDVLVLATGAKPRTLKIPGWE 114
Query: 124 EEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA-- 181
Y R + GA R +++L+IGGG +E A L++ G V ++ + +L
Sbjct: 115 RMYTLRTIEDAKRLKGAVEREKDLLIIGGGFIGLEIAGNLSKQGIKVKVVEKMTRLMGLD 174
Query: 182 QEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLD 241
+E+ ++ + EK V + D +++++ V K E+ + I +G+
Sbjct: 175 EELTERIKGELEK-----HGVEFYLGRDVERIENDVLVTDKE-EIPARV---ILCSIGIV 225
Query: 242 PVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKD 282
P A G+ G I+ D RTS P I+A+GD + +
Sbjct: 226 PEVSLAKESGLDVNRG-ILVDKTFRTSKPDIYAIGDCAEHE 265
gi|2984275 (AE000770) glutamate synthase small subunit gltD [Aquifex aeolicus]
Length = 476
Score = 65.2 bits (156), Expect = 7e-10
Identities = 78/335 (23%), Positives = 141/335 (41%), Gaps = 56/335 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPELS 64
+ V +IG+GPAG++ A A+ + + E PGG M Y I L
Sbjct: 154 FRVAVIGAGPAGLSCAHELAKKGHEVHVYEALPKPGGVM-----------YYGIPNARLD 202
Query: 65 MKMAE----PLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEI 120
+ E LE LG++ YG++ K I ++ ++ IA GA KL +
Sbjct: 203 KSIIEWEVKRLEKLGIKFFYGYLIG-------KNITLQELREKYDAVFIAVGAGRGKLGL 255
Query: 121 PGEEEYGARGVSYCAVCDGAFFRNQ------------EILVIGGGDSAVEEALYLTRFGQ 168
PG+ G + + N+ ++IGGG +AV+ A+ R G
Sbjct: 256 PGDHLKGVYSAIDFLMRVNLYKANEFPKKGVPVELGKRTVIIGGGFTAVDCAITANRLGV 315
Query: 169 SVTIMHRRDKLRAQEIIQQ-RAFKEEKINFIWDSVPMEIKGDDK-KVQSVVYKNVKTGEV 226
+++RR + + ++ EE + W + P+E+ G++K +V + ++ GE
Sbjct: 316 ETHVVYRRTRETSSARQEEWDHLMEEGVKIHWLTQPVEVIGNEKGEVVGLKCIKMELGEP 375
Query: 227 TEKA---------------FGGIFIYVG--LDPVAEFAGNLGITDEAGWIITDDHMRTSL 269
E + +G +P+A + G+ T + G I ++ T+L
Sbjct: 376 DESGRPRPVPVPNSEHIIECDSVIFAIGQRANPIA-YEGSGIKTTKWGTIEVNERYETNL 434
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
G+FA GDV R + A+ G +AA+ ++++
Sbjct: 435 EGVFAGGDVINGGDR-VVVALAHGKEAAKYIHEYL 468
emb|CAA15231| (AJ235273) DIHYDROLIPOAMIDE DEHYDROGENASE (pdhD) [Rickettsia
prowazekii]
Length = 459
Score = 64.8 bits (155), Expect = 9e-10
Identities = 81/328 (24%), Positives = 139/328 (41%), Gaps = 76/328 (23%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNN-----------TAEIENY 52
+KYDV +IG GP G AA+ A+ + K +L+E+ GG N +AE+ Y
Sbjct: 2 EKYDVAVIGGGPGGYVAAIRAAQLKKKVVLIEKAHLGGVCLNWGCIPTKSLLKSAEVFEY 61
Query: 53 PGYETIMG-------------PELSMKMAEPLEGLGVE-----NAYGFVTAIEDHGDYKK 94
+ G E S K+A L GV+ N + + G+ K
Sbjct: 62 IKHAQDYGIDVGIAEINIKKIVERSRKIANTL-ACGVQLLLKKNKVTIIDGVASFGENKV 120
Query: 95 IITEDDEFV-TKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGG 153
I D V ++IIIATG + L+ E + S A+ + +++IG G
Sbjct: 121 INVNDKPTVKAENIIIATGTRPKILQ-GFEPDIKQIWTSKEAMIPQHV--PKSMIIIGSG 177
Query: 154 DSAVEEALYLTRFGQSVTIMHRRDKLRAQEI-----IQQRAFKEEKINFIWDS------- 201
+E A + G VT++ ++++ E I + F+++ I I ++
Sbjct: 178 AIGIEFASFYNSIGVDVTVIEAKNRILPSEDTEIAGIAHKNFEQKGIKIITNAKLIKQTK 237
Query: 202 ------VPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITD- 254
V +E++G +K+Q+ + + + VG+ E NLG+
Sbjct: 238 SQNEIEVELELEGKTQKLQATI----------------LLMAVGISANIE---NLGLEKT 278
Query: 255 ----EAGWIITDDHMRTSLPGIFAVGDV 278
E G+I+T+ M+T+ GI+A+GDV
Sbjct: 279 KVEVENGYILTNGLMQTAESGIYAIGDV 306
pir||E35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Clostridium
sporogenes (fragment)
Length = 60
Score = 64.8 bits (155), Expect = 9e-10
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG 54
YD++IIGSGPAG++A +Y AR+ +KTL+L R GGQ+ T E+ NYPG
Sbjct: 5 YDLIIIGSGPAGLSAGLYAARARLKTLILXRNKAGGQIVITDEVANYPG 53
emb|CAA70224| (Y09024) mercuric reductase [Bacillus cereus]
Length = 546
Score = 64.0 bits (153), Expect = 2e-09
Identities = 81/318 (25%), Positives = 130/318 (40%), Gaps = 53/318 (16%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNN 45
E YD +IIGSG A ++A+ + K ++ERG G G++N+
Sbjct: 82 EGDYDYIIIGSGGAAFSSAIEAVKYGAKVAMIERGTIGGTCVNIGCVPSKTLLRAGEINH 141
Query: 46 TAEIENYPGYETIMGP-ELSMKMAEPLEGLGVENAYGFVTAIEDHG-----------DYK 93
A+ + G T G +L+ + + E + +V I+D+G D K
Sbjct: 142 LAKNNPFVGLHTSAGEVDLAPLIKQKNELVTELRNSKYVDLIDDYGFELIEGEAKFVDEK 201
Query: 94 KIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIG 151
+ K +IATGA+ K IPG E V Y + + ++VIG
Sbjct: 202 TVEVNGAPISAKRFLIATGASPAKPNIPGLNE-----VDYLTSTSLLELKKVPKRLVVIG 256
Query: 152 GGDSAVEEALYLTRFGQSVTIMHRRDKLRAQ---EIIQ--QRAFKEEKINFIWDSV--PM 204
G +E G VT++ R ++L + EI + +++ E+ IN + + +
Sbjct: 257 SGYIGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISESVEKSLVEQGINLVKGATYERI 316
Query: 205 EIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEF----AGNLGITDEAGWII 260
E GD KKV V + E + + + G P A + I G II
Sbjct: 317 EQNGDIKKVHVEVNGKKRIIEADQ-----LLVATGRTPNTATLNLRAAGVEI-GSRGEII 370
Query: 261 TDDHMRTSLPGIFAVGDV 278
DD+ RT+ I+A GDV
Sbjct: 371 IDDYSRTTNTRIYAAGDV 388
sp|P42433|NASB_BACSU ASSIMILATORY NITRATE REDUCTASE ELECTRON TRANSFER SUBUNIT
>gi|2127152|pir||I40027 nitrite reductase (nirB) -
Bacillus subtilis (fragment) >gi|710018|dbj|BAA06352|
(D30689) electolon trasporter subunit of nitrate
reductase [Bacillus subtilis] >gi|1805404|dbj|BAA08966|
(D50453) electron transfer subunit of nitrate reductase
[Bacillus subtilis] >gi|2632618|emb|CAB12126| (Z99105)
assimilatory nitrate reductase (electron transfer
subunit) [Bacillus subtilis]
Length = 770
Score = 64.0 bits (153), Expect = 2e-09
Identities = 70/286 (24%), Positives = 124/286 (42%), Gaps = 22/286 (7%)
Query: 4 KKYDVVIIGSGPAGMTAA--MYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGP 61
KK +V+ G+G AG+ + M +++ P N G ++
Sbjct: 2 KKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYNRILLSSVLQGEASLDDI 61
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVT-KSIIIATGANHRKLEI 120
L+ K G+ + Y T I+ D +++IT+ ++ +I+ATG++ L I
Sbjct: 62 TLNSKDWYDKHGITL---YTGETVIQIDTDQQQVITDRKRTLSYDKLIVATGSSPHILPI 118
Query: 121 PGEEE---YGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
PG ++ YG R + C Q+ VIG G +E A+ L G V+++H
Sbjct: 119 PGADKKGVYGFRTIEDCQALMNMAQHFQKAAVIGAGLLGLEAAVGLQHLGMDVSVIHHSA 178
Query: 178 KLRAQEIIQ------QRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAF 231
+ +++ Q Q +++ + F+ + + I G K + + K G +
Sbjct: 179 GIMQKQLDQTAARLLQTELEQKGLTFLLEKDTVSISGATKADRI----HFKDGSSLKADL 234
Query: 232 GGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGD 277
I + G+ P E A + GI G II +D M+TS P I+AVG+
Sbjct: 235 --IVMAAGVKPNIELAVSAGIKVNRG-IIVNDFMQTSEPNIYAVGE 277
emb|CAA71040| (Y09907) mercuric reductase [Bacillus megaterium]
Length = 631
Score = 63.2 bits (151), Expect = 3e-09
Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNNTAE 48
YD +IIGSG A ++A+ K ++ERG G G++N+ A+
Sbjct: 170 YDYIIIGSGGAAFSSAIEAVALNAKVAMIERGTVGGTCVNVGCVPSKTLLRAGEINHLAK 229
Query: 49 IENYPGYET-IMGPELSMKMAEPLEGLGVENAYGFVTAIEDHG-----DYKKIITED--- 99
+ G T +L+ + + + + +V I+D+G K + E+
Sbjct: 230 NNPFVGLHTSASNVDLAPLIKQKNDLVTEMRNEKYVNLIDDYGFELIKGEAKFVNENTVE 289
Query: 100 ---DEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIGGGD 154
++ K +IATGA+ IPG +E V Y + + VIG G
Sbjct: 290 VNGNQITAKRFLIATGASSTAPNIPGLDE-----VDYLTSTSLLELKKVPNRLTVIGSGY 344
Query: 155 SAVEEALYLTRFGQSVTIMHRRDKLRAQ---EIIQ--QRAFKEEKINFIWDSV--PMEIK 207
+E G VT++ R ++L + EI + +A E+ IN + + +E
Sbjct: 345 IGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISEAITKALTEQGINLVTGATYERVEQD 404
Query: 208 GDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITD----EAGWIITDD 263
GD KKV + + E + + I G P E + NL D G II DD
Sbjct: 405 GDIKKVHIEINGKKRIIEAEQ-----LLIATGRKPNTE-SLNLHAADVEVGSRGEIIIDD 458
Query: 264 HMRTSLPGIFAVGDV 278
+++T+ I+A GDV
Sbjct: 459 YLKTTNSRIYAAGDV 473
gi|536838 (L36129) NADPH thioredoxin reductase [Helianthus annuus]
Length = 117
Score = 63.2 bits (151), Expect = 3e-09
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 219 KNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMR-TSLPGIFAVGD 277
KNV +GEV++ G+F +G +P +F D G+++T +S+ G+FA GD
Sbjct: 20 KNVVSGEVSDLKVNGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTISSVKGVFAAGD 79
Query: 278 VRQKDFRQITTAIGDGAQAAQEAYKFVAEL 307
V+ K +RQ TA G G AA +A ++ E+
Sbjct: 80 VQDKKYRQAVTAAGSGCMAALDAEHYLQEI 109
gb|AAD56915.1|AF180145_7 (AF180145) glutamate synthase small subunit gltS [Zymomonas
mobilis]
Length = 490
Score = 62.8 bits (150), Expect = 4e-09
Identities = 85/345 (24%), Positives = 147/345 (41%), Gaps = 58/345 (16%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
+TE V IIGSGPAG+TAA + + + +R V G + PG+ +
Sbjct: 144 ITELGISVGIIGSGPAGLTAAEKLRQQGYQVHVYDRHVRAGGLLTYC----IPGFR--LD 197
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGA-NHRKLE 119
++ + + L G Y F ++ K +T +I+IATG R L
Sbjct: 198 KDIVARRVKRLADWGCHLPYQFARRVKMPA-LKNCVTH------AAILIATGVYKARGLA 250
Query: 120 IPGEEEYG--------------ARGVSYCAVCDGAF-FRNQEILVIGGGDSAVEEALYLT 164
PG+E G + G A +G + ++++VIGGGD+A++
Sbjct: 251 TPGKELNGIVDALDFLISSNRKSFGDKVEAFDNGTLDAKGKKVVVIGGGDTAMDCVRTAI 310
Query: 165 RFG-QSVTIMHRRDKLR----AQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYK 219
R G +SV ++RRD++ A+E+ + ++E F+W S P G D VQSV +
Sbjct: 311 RQGAESVRCLYRRDRVNMPGSAREV---KNAEDEGAEFVWLSAPESFVGKD-HVQSVKVR 366
Query: 220 NVKTG---------------EVTEKAFGGIFIYVGLD----PVAEFAGNLGITDEAGWII 260
++ G + + + +G P A L +T
Sbjct: 367 GMRLGAPDGSGRRSPEPDPARLFDMDADLVICALGFSPEDLPTLFNAPELSVTPWGTVEA 426
Query: 261 TDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVA 305
++TS+ G+FA GD+ + + AI DG A+++ ++++A
Sbjct: 427 DPVTLQTSIEGVFAAGDI-VRGASLVVWAIRDGLVASEQMHQWLA 470
gi|2649317 (AE001017) NADH oxidase (noxB-2) [Archaeoglobus fulgidus]
Length = 632
Score = 61.7 bits (147), Expect = 8e-09
Identities = 83/301 (27%), Positives = 123/301 (40%), Gaps = 49/301 (16%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGP 61
EK VVI+G GP G AA AR K +L E+ GGQ+N A ++ GYE
Sbjct: 372 EKPKKVVIVGGGPGGCMAAEMLARKGHKVVLFEKTDKLGGQLNLAA--KSPLGYEF---A 426
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
E+ L LGVE Y D K++ E+ + +IA GA+ IP
Sbjct: 427 EVGKYFMNVLPKLGVEVRY------NTEADAGKVLAENPDVA----VIAVGASPLIPPIP 476
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
G E V+ V G ++VIGGG + A L G+ VTI+ K+
Sbjct: 477 GVE----NAVTAFDVLAGRAEVGNSVVVIGGGGVGCDVAAELANEGKKVTIVEMLPKIGQ 532
Query: 182 QEIIQQR-----AFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFI 236
I R KE+ + + ++ +EIK + V+ + GE E I
Sbjct: 533 DIGISTRWTVLMYLKEKGVEMLTNTKAVEIKPNAVVVE-------QNGERKELQCDTAVI 585
Query: 237 YVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQA 296
VG P N G+ DE ++ + ++ +GD + R+ A +GA+
Sbjct: 586 AVGTKP------NNGLYDE---------LQGKVSELYKIGDCVKP--RKALDATREGAEL 628
Query: 297 A 297
A
Sbjct: 629 A 629
emb|CAB49194.1| (AJ248283) PROBABLE MONOOXYGENASE [Pyrococcus abyssi]
Length = 407
Score = 61.3 bits (146), Expect = 1e-08
Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 44/330 (13%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLL-ERGVPGGQMNNTAEIENYPGY------ETI 58
YDV +IG GPAGM AA+ + +L+ E GG + +PG+ E +
Sbjct: 2 YDVAVIGGGPAGMAAAIKARELGLSVILIDENDYLGGILPQCI----HPGFGIHYFKEEL 57
Query: 59 MGPELSMKMAEPLEGLGVENAYGFVTAI--EDHGDYKKIITED--DEFVTKSIIIATGAN 114
GPE + K+ L + V + V I D K+I+ +E K+II A GA
Sbjct: 58 TGPEFAYKLMNRLRDVEVRTSARVVEIINYSDIEKRLKVISPSGIEEIRAKTIIYAAGAR 117
Query: 115 HR---KLEIPGEEEYG--ARGVSYCAVCDGAFFRNQEILVIGGGD----SAVEEALYLTR 165
R ++ I G+ G G + + +EIL++G GD A AL R
Sbjct: 118 ERHAFEIGITGDRVAGIFTAGEAQTLMDIYGIMPGREILIVGSGDVGLIMARRFALEGAR 177
Query: 166 FGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGE 225
+ +M L +I + I +EI+G +VQ V K VK E
Sbjct: 178 VKAVIELMPYPGGLARNVMI----LNDFNIPLYLSHKVVEIRGKG-RVQRV--KIVKVDE 230
Query: 226 VTEKAFGGIFIYVGLDPVAEFAG-----------NLGITDEAGWIITDDHMRTSLPGIFA 274
+ G F +V +D V AG + I G I +D + T++PGIF
Sbjct: 231 NLREIPGTEF-WVDVDTVIISAGLIPNVKLLTKVGVAIDPSTGGPIVNDRLETTVPGIFV 289
Query: 275 VGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
G+ + + + G AA+ A +F+
Sbjct: 290 AGNALVIN-DLVDYVVEQGELAAEGAKEFI 318
emb|CAA76564| (Y16963) thioredoxin reductase [Klebsiella oxytoca]
Length = 128
Score = 60.9 bits (145), Expect = 1e-08
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPG-YETIMG 60
T K ++I+GSGPAG TAA+Y AR+ ++ +L+ GGQ+ T E+EN+PG + G
Sbjct: 3 TAKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 62
Query: 61 PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEF 102
P L +M E E + + +++ +++ + E+
Sbjct: 63 PLLMERMHEHATKFETEIIFDHINSVDLQNRPFRLVGDSGEY 104
emb|CAA05635| (AJ002606) redA2 [Sphingomonas sp.]
Length = 409
Score = 60.9 bits (145), Expect = 1e-08
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 27/286 (9%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS-- 64
DVVI+G+G AG A+ ++ + + G N E P + E S
Sbjct: 5 DVVIVGAGHAGAQCAIALRQAGYEGSIALVG-----RENEVPYERPPLSKEYFSREKSFE 59
Query: 65 ---MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
++ E + G + D G +++ F ++ ATG + RKL P
Sbjct: 60 RLYIRPPEFWREKDIHLTLGIEVSAVDPGSKVLTLSDGSAFAYGQLVWATGGDPRKLACP 119
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQ----EILVIGGGDSAVEEALYLTRFGQSVTIMHRRD 177
G E G + A CD +++V+GGG +E A LT+ VT++
Sbjct: 120 GAELSGVHAIRTRADCDRLMAEIDRGLTQVVVVGGGYIGLEAAAVLTKLNCHVTLLEAMP 179
Query: 178 KLRAQ------EIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAF 231
++ A+ + + ++ ++G + V+ G+ +
Sbjct: 180 RVLARVAGTELSTFYENEHRGHGVDLRTGITVAALEGQES------VTGVRLGDGSVLPA 233
Query: 232 GGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGD 277
+ + +G+ P G + G + D++ RTSLP +FA+GD
Sbjct: 234 QAVIVGIGIVPAVAPLIEAGAAGDGG-VTVDEYCRTSLPDVFAIGD 278
gi|2650172 (AE001073) NADH oxidase (noxB-1) [Archaeoglobus fulgidus]
Length = 632
Score = 60.9 bits (145), Expect = 1e-08
Identities = 76/259 (29%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGP 61
EK VVI+G GP G AA AR K +L E+ GGQ+N A ++ GYE
Sbjct: 372 EKPKKVVIVGGGPGGCMAAEMLARKGHKVVLFEKTDKLGGQLNLAA--KSPLGYEF---A 426
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIP 121
E+ L LGVE Y D K++ E+ + +IA GA+ IP
Sbjct: 427 EVGKYFMNVLPKLGVEVRY------NTEADAGKVLAENPDVA----VIAVGASPLIPPIP 476
Query: 122 GEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA 181
G E V+ V G ++VIGGG + A L G+ VTI+ K+
Sbjct: 477 GVE----NAVTAFDVLAGRAEVGNSVVVIGGGGVGCDVAAELANEGKKVTIVEMLPKIGQ 532
Query: 182 QEIIQQR-----AFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFI 236
I R KE+ + + ++ +EIK + V+ + GE E I
Sbjct: 533 DIGISTRWTVLMYLKEKGVEMLTNTKAVEIKPNAVVVE-------QNGERKELQCDTAVI 585
Query: 237 YVGLDPVAEFAGNLGITDE 255
VG P N G+ DE
Sbjct: 586 AVGTKP------NNGLYDE 598
gb|AAF16001.1|AF187159_1 (AF187159) TrxB [Streptomyces coelicolor]
Length = 109
Score = 60.5 bits (144), Expect = 2e-08
Identities = 38/98 (38%), Positives = 54/98 (54%), Gaps = 4/98 (4%)
Query: 212 KVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAE-FAGNLGITDEAGWIITD-DHMRTSL 269
K+ + +NVKTGE+++ +FI +G DP E F G L + E ++ D RT+L
Sbjct: 1 KLAGLKLRNVKTGELSDLPVTALFIAIGHDPRTELFKGQLDLDPE--YLKVDAPSTRTNL 58
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFVAEL 307
G+F GDV +RQ TA G G AA +A F+A L
Sbjct: 59 TGVFGAGDVVDHTYRQAITAAGTGCSAAVDAEPFLAAL 96
sp|P16171|MERA_BACSR MERCURIC REDUCTASE (HG(II) REDUCTASE) >gi|98176|pir||E32227
mercury(II) reductase (EC 1.16.1.1) - Bacillus sp
>gi|143191|gb|AAA83977.1| (AF138877) mercuric reductase
MerA [Bacillus sp. RC607]
Length = 631
Score = 60.5 bits (144), Expect = 2e-08
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 54/337 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNNTAE 48
YD +IIGSG A ++A+ K ++ERG G G++N+ A+
Sbjct: 170 YDYIIIGSGGAAFSSAIEAVALNAKVAMIERGTVGGTCVNVGCVPSKTLLRAGEINHLAK 229
Query: 49 IENYPGYET-IMGPELSMKMAEPLEGLGVENAYGFVTAIEDHG-----DYKKIITED--- 99
+ G T +L+ + + + + +V I+D+G K + E+
Sbjct: 230 NNPFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGESKFVNENTVE 289
Query: 100 ---DEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIGGGD 154
++ K +IATGA+ IPG +E V Y + + VIG G
Sbjct: 290 VNGNQITAKRFLIATGASSTAPNIPGLDE-----VDYLTSTSLLELKKVPNRLTVIGSGY 344
Query: 155 SAVEEALYLTRFGQSVTIMHRRDKLRAQ---EIIQ--QRAFKEEKINFIWDSV--PMEIK 207
+E G VT++ R ++L + EI + +A E+ IN + + +E
Sbjct: 345 IGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISEAITKALTEQGINLVTGATYERVEQD 404
Query: 208 GDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNL---GI-TDEAGWIITDD 263
GD KKV + + E + + I G P+ + + NL G+ G I+ DD
Sbjct: 405 GDIKKVHVEINGKKRIIEAEQ-----LLIATGRKPI-QTSLNLHAAGVEVGSRGEIVIDD 458
Query: 264 HMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
+++T+ I++ GDV + + A +G AA+ A
Sbjct: 459 YLKTTNSRIYSAGDVTPGP-QFVYVAAYEGGLAARNA 494
emb|CAB61868.1| (AL133252) putative oxidoreductase [Streptomyces coelicolor]
Length = 505
Score = 59.7 bits (142), Expect = 3e-08
Identities = 77/316 (24%), Positives = 129/316 (40%), Gaps = 59/316 (18%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQ------------MNNTAEIE- 50
K+YD+V+IG G AG+TAA R +TLL+ER GG ++ A+++
Sbjct: 38 KRYDLVVIGGGSAGLTAARTAGRLGARTLLVERDRLGGDCLWTGCVPSKALLHVAADVQA 97
Query: 51 ----NYPGYETIMGP-ELSMKMAEPLEGLGVENAYGFVTAIEDHG-----------DYKK 94
G + GP +L+ +AE +G + A+ +G
Sbjct: 98 ARRATAYGLPPVTGPADLTAALAEVKRAIGAIEPHDSAEALAPYGVDVTHGAASFTGPGT 157
Query: 95 IITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE----ILVI 150
+ + E + +IATG++ + IPG E G + + E ++V+
Sbjct: 158 LTAGEREVSFRYALIATGSSPALVPIPGLVESG-------PLTSDTVWELSELPHLLVVL 210
Query: 151 GGGDSAVEEALYLTRFGQSVTIMHRRDKL------RAQEIIQQRAFKEEKINFIWDSVPM 204
GGG E R G VT++ D+L RA +++++R + E + + D
Sbjct: 211 GGGPIGCELGQAFARLGSQVTLVEAMDRLVPREEPRASQVLRER-LQSEGVTVLTDYRAE 269
Query: 205 EIKGDDKKVQS--VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITD 262
+ D + Y + G+ GL+ A + +TD AG I TD
Sbjct: 270 RVDADAVHGPGGPLPYDALLAVTGRRSHTHGL----GLE-----AAGVELTD-AGHIRTD 319
Query: 263 DHMRTSLPGIFAVGDV 278
+RT+ I+A GDV
Sbjct: 320 GRLRTTNHRIYAAGDV 335
dbj|BAA86117.1| (AB024961) MerA [Clostridium butyricum]
Length = 631
Score = 59.7 bits (142), Expect = 3e-08
Identities = 80/336 (23%), Positives = 137/336 (39%), Gaps = 52/336 (15%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNNTAE 48
YD +IIGSG A ++A+ K ++ERG G G++N+ A+
Sbjct: 170 YDYIIIGSGGAAFSSAIEAVALNAKVAMIERGTVGGTCVNVGCVPSKTLLRAGEINHLAK 229
Query: 49 IENYPGYET-IMGPELSMKMAEPLEGLGVENAYGFVTAIEDHG-----DYKKIITED--- 99
+ G T +L+ + + + + +V I+D+G K + E+
Sbjct: 230 NNPFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGEAKFVNENTVE 289
Query: 100 ---DEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIGGGD 154
++ K +IATGA+ IPG +E V Y + + VIG G
Sbjct: 290 VNGNQITAKRFLIATGASSTAPNIPGLDE-----VDYLTSTSLLELKKVPNRLTVIGSGY 344
Query: 155 SAVEEALYLTRFGQSVTIMHRRDKLRAQ---EIIQ--QRAFKEEKINFIWDSV--PMEIK 207
+E G VT++ R ++L + EI + +A E+ IN + + +E
Sbjct: 345 IGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISEAITKALTEQGINLVTGATYERVEQD 404
Query: 208 GDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGI-TDEAGWIITDDH 264
GD KKV + + E + + I G P E G+ G I+ DD+
Sbjct: 405 GDIKKVHVEINGKKRIIEAEQ-----LLIATGRKPNTESLNLHAAGVEVGSRGEIVIDDY 459
Query: 265 MRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
++T+ I++ GDV + + A +G AA+ A
Sbjct: 460 LKTTNSRIYSAGDVTPGP-QFVYVAAYEGGLAARNA 494
emb|CAA67822| (X99457) mercuric reductase [Exiguobacterium sp.]
Length = 631
Score = 59.3 bits (141), Expect = 4e-08
Identities = 75/314 (23%), Positives = 128/314 (39%), Gaps = 51/314 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNNTAE 48
YD +IIGSG A ++A+ K ++ERG G G++N+ A+
Sbjct: 170 YDYIIIGSGGAAFSSAIEAVALNAKVAMIERGTVGGTCVNVGCVPSKTLLRAGEINHLAK 229
Query: 49 IENYPGYET-IMGPELSMKMAEPLEGLGVENAYGFVTAIEDHG-----DYKKIITED--- 99
+ G T +L+ + + + + +V I+D+G K + E+
Sbjct: 230 NNPFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGEAKFVNENTVE 289
Query: 100 ---DEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIGGGD 154
++ K +IATGA+ IPG +E V Y + + VIG G
Sbjct: 290 VNGNQITAKRFLIATGASSTAPNIPGLDE-----VDYLTSTSLLELKKVPNRLTVIGSGY 344
Query: 155 SAVEEALYLTRFGQSVTIMHRRDKLRAQ---EIIQ--QRAFKEEKINFIWDSV--PMEIK 207
+E G VT++ R ++L + EI + +A E+ IN + + +E
Sbjct: 345 IGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISEAITKALTEQGINLVTGATYERVEQD 404
Query: 208 GDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGI-TDEAGWIITDDH 264
GD KKV + + E + + I G P E G+ G I+ DD+
Sbjct: 405 GDIKKVHVEINGKKRIIEAEQ-----LLIATGRKPNTESLNLHAAGVEVGSRGEIVIDDY 459
Query: 265 MRTSLPGIFAVGDV 278
++T+ I++ GDV
Sbjct: 460 LKTTNSRIYSAGDV 473
gi|2650233 (AE001077) NADH oxidase (noxA-3) [Archaeoglobus fulgidus]
Length = 551
Score = 59.3 bits (141), Expect = 4e-08
Identities = 75/295 (25%), Positives = 121/295 (40%), Gaps = 33/295 (11%)
Query: 7 DVVIIGSGPAGMTAAMYTARSEM----------KTLLLER-GVPGGQMNNTAEIENYPGY 55
+VV+IG G AG+ AA R + K + L R G+P E++N
Sbjct: 2 NVVVIGGGAAGLKAASRIRRKDGDASITVVEAGKYVSLGRCGLPYYVGGLVHEVDNLR-- 59
Query: 56 ETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITE--DDEFVTKSIIIATGA 113
ET G + L+ + V T I+ KI+ +DE ++IATGA
Sbjct: 60 ETTYGAVRDEAYFKKLKNIDVLTET-VATEIDRSRKTVKIVRNGSEDELNYDYLVIATGA 118
Query: 114 NHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE----ILVIGGGDSAVEEALYLTRFGQS 169
K I G E G ++ + +E +VIG G +E A L
Sbjct: 119 RPAKPPIEGIEAEGVVTLTSAEEAEKIIEMWEEGAEKAVVIGAGFIGLESAEALKNLDME 178
Query: 170 VTIMHRRDKL------RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKT 223
VT++ D++ R ++ + +E+ +N + + +I D KV++V+
Sbjct: 179 VTVIEMMDRVAPAMLDREMAVLVENHLREKGVNVVTSTRVEKIVSQDDKVRAVIANG--- 235
Query: 224 GEVTEKAFGGIFIYVGLDPVAEFAGNLGIT-DEAGWIITDDHMRTSLPGIFAVGD 277
E + + G+ P +E A G+ E G I D++MRTS I+A GD
Sbjct: 236 ---KEYPADVVVVATGIKPNSELAEKAGLKIGETGAIWVDEYMRTSDESIYAGGD 287
gb|AAF09991.1|AE001901_6 (AE001901) pyridine nucleotide-disulphide oxidoreductase, class II
[Deinococcus radiodurans]
Length = 324
Score = 58.9 bits (140), Expect = 5e-08
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 34/286 (11%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS 64
+YD VI+G+GPAG+ AA+ + + LLL+ G P N TA+ + G T G +
Sbjct: 11 EYDAVIVGAGPAGLNAALVLGGARRRVLLLDGGPP---RNVTAQAAH--GVFTRDGTPPA 65
Query: 65 MKMAEPLEGLGVENAYGFVTAI-----EDHGDYKKIITEDDEFVTKSIIIATGANHRKLE 119
LE L + T ED G + + E + ++ ATG
Sbjct: 66 DLKTVGLEQLAPYDVTVLGTPAREIRPEDDGTF-SVRYEQRWVRARRLLFATGVRDVLPR 124
Query: 120 IPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIM-HRRDK 178
IPG E R V +C CDG R + V+G AL + + ++++ + D+
Sbjct: 125 IPGLRERWGRTVHHCPYCDGWPNRAARLAVLGSHQEGHHLALSVRSWSDHISLLTNGPDE 184
Query: 179 LRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKV-----QSVVYKNVKTGEVTEKAFGG 233
L Q+R +E ++I+ D+ + + V + GEV E +
Sbjct: 185 LTP---AQRRDLRE-----------LDIERCDRPIRHFSGRDTVRVTFEDGEVRE--YDA 228
Query: 234 IFIYVGLDPVAEFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDV 278
IF+ + LG DE +I +++ TS G++A GD+
Sbjct: 229 IFLNPAQVQRSRLPELLGCELDEKSRVIVNENGMTSRRGVWAAGDM 274
gb|AAD17483| (AF047034) dihydrolipoamide dehydrogenase [Streptomyces seoulensis]
Length = 462
Score = 58.9 bits (140), Expect = 5e-08
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 52/312 (16%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGG---------------------QMN 44
+D+VI+G G G AA+ A+ + L+E+ GG Q
Sbjct: 9 FDLVILGGGSGGYAAALRGAQLGLDVALIEKDKVGGTCLHKGCIPTKALLHAGEIADQAR 68
Query: 45 NTAEIENYPGYETIMGPELSMKMAEPLEGL--GVEN--AYGFVTAIEDHGDYKKIITED- 99
+ + +E I P + + + GL G++ A VT IE G + D
Sbjct: 69 ESEQFGVKATFEGIDVPAVQKYKDDVISGLYKGLQGLIASRKVTYIEGEGRLSSPTSVDV 128
Query: 100 --DEFVTKSIIIATGANHRKLEIPGEEEYGARGVS--YCAVCDGAFFRNQEILVIGGGDS 155
+ +++ATG+ + L PG + G R +S + V D + +++GGG
Sbjct: 129 NGQRIEGRHVLLATGSVPKSL--PGLQIDGDRIISSDHALVLDRV---PKSAIILGGGVI 183
Query: 156 AVEEALYLTRFGQSVTIMHRRDKLRAQEI-----IQQRAFKEEKINFIWDSV--PMEIKG 208
VE A FG VT++ L E + +RAF++ I F + E
Sbjct: 184 GVEFASAWKSFGADVTVIEGLKHLVPVEDENSSKLLERAFRKRGIKFSLGTFFEKAEYTQ 243
Query: 209 DDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGITDEAGWIITDDHMR 266
D KV K + EV + + VG PV++ G G+ + G+++ D++MR
Sbjct: 244 DGVKVTLADGKEFEA-EV-------LLVAVGRGPVSQNLGYEEQGVNIDRGYVLVDEYMR 295
Query: 267 TSLPGIFAVGDV 278
T++P I AVGD+
Sbjct: 296 TNVPTISAVGDL 307
dbj|BAA29661| (AP000002) 445aa long hypothetical NADH oxidase [Pyrococcus
horikoshii]
Length = 445
Score = 58.9 bits (140), Expect = 5e-08
Identities = 72/301 (23%), Positives = 131/301 (42%), Gaps = 45/301 (14%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARS----EMKTLLLERGVPGGQMNNTAEIENYPGYETIM- 59
K VVIIG G AGM+AA R ++K V +E + +M
Sbjct: 6 KKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMY 65
Query: 60 -GPELSMKMAE---PLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANH 115
PE+ +K L +E G+V E+ G+ + ++ A GA+
Sbjct: 66 YPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGE--------KSYEWDYLVFANGASP 117
Query: 116 RKLEIPGEEEYGARGVSYCAVCDGAF--------FRNQEILVIGGGDSAVEEALYLTRFG 167
++P E +GV + A ++ + +++IGGG +E A G
Sbjct: 118 ---QVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQG 174
Query: 168 QSVTIMHRRDKL-------RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKN 220
++VT++ R +++ +I++++ K +N + M+I+G+++ V+ VV
Sbjct: 175 KNVTMIVRGERVLRRSFDKEVTDILEEKLKKH--VNLRLQEITMKIEGEER-VEKVV--- 228
Query: 221 VKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGIT-DEAGWIITDDHMRTSLPGIFAVGDVR 279
GE + + + G+ P E A LG+ E G I T++ M+TS+ ++A GDV
Sbjct: 229 TDAGEYKAEL---VILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVA 285
Query: 280 Q 280
+
Sbjct: 286 E 286
dbj|BAA30863.1| (AP000007) 482aa long hypothetical D-nopaline dehydrogenase
[Pyrococcus horikoshii]
Length = 482
Score = 57.8 bits (137), Expect = 1e-07
Identities = 78/323 (24%), Positives = 136/323 (41%), Gaps = 33/323 (10%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLL-ERGVPGGQMNNT-----AEIENYPGYETI 58
K D++++G GPAGM AA+ + + K +L+ E + GGQ+ + + + G I
Sbjct: 120 KGDIIVVGGGPAGMMAAISASDTGAKVILIDESPMLGGQLVKQTHKFFGKRDQFAGIRGI 179
Query: 59 MGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKII-----TEDDEFVTKSIIIATGA 113
E+ + E E + V +D G+ K +I E EF K++I+ATGA
Sbjct: 180 KIAEILRREIEKRENIKAYLRTSAVGIFQD-GEEKLVIGVRKENELIEFKGKAVIVATGA 238
Query: 114 NHRKL-----EIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQ 168
+ + ++PG YGA + G ++ L++G G+ + A L +
Sbjct: 239 MEKTIPFENNDLPG--IYGAGAIQTLMNTYG-IKPGEKALIVGAGNVGLILAYQLLQANV 295
Query: 169 SVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVY---KNVKTGE 225
V + + + + + ++ +G++K +++V +N
Sbjct: 296 QVQAIVEAMPKIGGYFVHAAKVRRLGVPILTRHTILKAEGEEKVERAIVAEIDENWNPIP 355
Query: 226 VTEKAFGG--IFIYVGLDPVAEFAGNLG-----ITDEAGWI-ITDDHMRTSLPGIFAVGD 277
TEK F I I VGL P E G + + G + + D M T++ GIF GD
Sbjct: 356 GTEKIFDVDLIAIAVGLRPSIELLQQAGCQIKYVRELGGHVPVRDRWMETTVKGIFVAGD 415
Query: 278 VRQKDFRQITTAIGDGAQAAQEA 300
+ TTA+ +G A A
Sbjct: 416 T--AGIEEATTAMLEGKIAGLAA 436
emb|CAA73495| (Y13052) ORF454 [Staphylococcus sciuri]
Length = 454
Score = 57.4 bits (136), Expect = 2e-07
Identities = 83/330 (25%), Positives = 120/330 (36%), Gaps = 69/330 (20%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNN---------------TAE 48
KK+DVV IGSG A AA+ + ++E+ G N E
Sbjct: 2 KKFDVVFIGSGHAAWHAALTLKHAGKSVAIIEKDTIAGTCTNYGCNAKILLEGPYEVLEE 61
Query: 49 IENYP----------GYETIMGPE------LSMKMAEPLEGLGVENAYGFVTAIEDHGDY 92
+YP +E +M + LS + E G+E G ++ H
Sbjct: 62 ASHYPQIIESDQLHVNWENLMQYKKAVINPLSNTLKSMFEQQGIEVIMGAGKLVDAH--- 118
Query: 93 KKIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN-----QEI 147
I E +I+IATG + KL+I G D F + I
Sbjct: 119 -TIDVEGTPIQADNIVIATGQHSNKLDIEGS----------ALTHDSRDFLSLDKMPNNI 167
Query: 148 LVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIK 207
IG G ++E A + G V ++H DK F E+ I + +E +
Sbjct: 168 TFIGAGIISIEFASIAIKSGAEVHVIHHTDK-------PLEGFNEKHIAKLIHK--LESE 218
Query: 208 G----DDKKVQSVVYKNVKTGEVTEKAFGGIFIYV----GLDPVAEFAG--NLGITDEAG 257
G ++ VQSV TE YV G P + G LGI
Sbjct: 219 GVQFHFNENVQSVQQAGNSYNVTTESGLSIDTEYVLDATGRKPNVQNIGLDELGIEYSEK 278
Query: 258 WIITDDHMRTSLPGIFAVGDVRQKDFRQIT 287
I DDH+RT++ I+A GDV K ++T
Sbjct: 279 GIRVDDHLRTNIHNIYASGDVLDKTIPKLT 308
emb|CAB50317.1| (AJ248287) NADH oxidase (noxA-1) [Pyrococcus abyssi]
Length = 446
Score = 57.0 bits (135), Expect = 2e-07
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARS----EMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
K VVIIG G AGM+AA R ++K V +E E +M
Sbjct: 7 KKTVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGISPTEKLMH 66
Query: 61 --PELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDE--FVTKSIIIATGANHR 116
PE+ +K L E IE Y ++ +D E + ++ A GA+
Sbjct: 67 YPPEVFIKKRGIDLHLNAE-------VIEVDTGYVRVREKDGEKSYEWDYLVFANGASP- 118
Query: 117 KLEIPGEEEYGARGVSYCAVCDGAFF--------RNQEILVIGGGDSAVEEALYLTRFGQ 168
++P E +GV + A R ++++++GGG +E A G+
Sbjct: 119 --QVPAIEGVDLKGVFTADLPPDAVAIREYMEKNRVEDVVIVGGGYIGLEMAEAFVAQGK 176
Query: 169 SVTIMHRRDKL-------RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNV 221
VT++ R +++ +II+++ ++ +N + + I+G D+ V+ VV
Sbjct: 177 RVTMIVRGERILRRSFDKEVTDIIEEKL--KQHVNLRLQEIVLRIEGKDR-VEKVV---T 230
Query: 222 KTGEVTEKAFGGIFIYVGLDPVAEFAGNLGIT-DEAGWIITDDHMRTSLPGIFAVGDVRQ 280
GE + + G+ P E A LG+ E G I T++ M+TS+ ++A GDV +
Sbjct: 231 DAGEYRADL---VILATGIKPNIELARQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAE 287
emb|CAA73535| (Y13094) ORF503 [Staphylococcus sciuri]
Length = 503
Score = 57.0 bits (135), Expect = 2e-07
Identities = 76/327 (23%), Positives = 128/327 (38%), Gaps = 63/327 (19%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNN---------------TAE 48
KK+DVV IGSG A AA+ + ++E+ G N E
Sbjct: 2 KKFDVVFIGSGHAAWHAALTLKHAGKSVAIIEKDTIAGTCTNYGCNAKILLEGPYEVLEE 61
Query: 49 IENYP----------GYETIMGPE------LSMKMAEPLEGLGVENAYGFVTAIEDHGDY 92
+YP +E +M + LS + E G+E G ++ H
Sbjct: 62 ASHYPQIIESDQLHVNWENLMQYKKAVINPLSNTLKSMFEQQGIEVIMGAGKLVDAH--- 118
Query: 93 KKIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN-----QEI 147
+ E ++I+IATG + KL+I G R +++ D F + I
Sbjct: 119 -TVDVEGTPIQAENIVIATGQHSNKLDIEG------RALTH----DSRDFLSLDKMPNSI 167
Query: 148 LVIGGGDSAVEEALYLTRFGQSVTIMHRRDK----LRAQEIIQQ-RAFKEEKINFIWDSV 202
IG G ++E + + G V ++H DK + I + + E +N S+
Sbjct: 168 TFIGAGIISIEFSSIAIKSGAEVHVIHHTDKPLDGFNEKHIAKLIHKLESEGVN----SI 223
Query: 203 PMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGITDEAGWII 260
M++ K+ + + +TG + + + G P + G LGI I
Sbjct: 224 SMKMFNQYNKLGNSYHVTTETGLSVDTDY--VLDATGRKPNVQNIGLDELGIEYSEKGIQ 281
Query: 261 TDDHMRTSLPGIFAVGDVRQKDFRQIT 287
DD++RT++ I+A GDV K ++T
Sbjct: 282 VDDYLRTNIHNIYASGDVLDKTIPKLT 308
gi|1263179 (U24215) p-cumate dioxygenase ferredoxin reductase subunit
[Pseudomonas putida] >gi|1588761|prf||2209341A p-cumate
2,3-dioxygenase:SUBUNIT=ferredoxin reductase
[Pseudomonas putida]
Length = 402
Score = 55.4 bits (131), Expect = 6e-07
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 52/303 (17%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
M E +VIIG+G AG T A R+ G++ E + P YE
Sbjct: 1 MGEDISKIVIIGAGQAGATVAFGLRRNGF----------AGEITLVGEESHLP-YER--- 46
Query: 61 PELSMKMAEP-------------LEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSI 107
P+LS +M P E + G D + ++ + + +
Sbjct: 47 PQLSKEMLRPEASAHKSIKTRADYEEQSILLELGCKVVRADAQAHSIVLDDGRQLAFDRL 106
Query: 108 IIATGANHRKLEIPGEEEYGARGVSYCAVCDGA------FFRNQEILVIGGGDSAVEEAL 161
+IATG R+L + GA V Y + A + + ++GGG +E A
Sbjct: 107 VIATGVQPRRLSSAFQ---GAHRVHYLRTLEDAARLRADLEAGKSLAIVGGGVIGLEVAA 163
Query: 162 YLTRFGQSVTIMHRRDKLRAQEIIQ------QRAFKEEKINFIWDSVPMEIKGDDKKVQS 215
VT++ D+L ++ + + RA + ++ + E+ D + S
Sbjct: 164 AARALNCPVTLIEAADRLMSRSVDEVVSAYLDRAHRRNGVDIRYGVAATELLDDGRLRLS 223
Query: 216 VVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAV 275
G V +A + + +G+ P E +L ITD G + D + +T +PGIFA
Sbjct: 224 ------DGGTVPAEA---VLVGIGVTPNIEGFEHLDITDATG-VRVDAYSQTVVPGIFAT 273
Query: 276 GDV 278
GD+
Sbjct: 274 GDI 276
emb|CAB49234.1| (AJ248284) sarcosine oxidase, subunit alpha (soxA) [Pyrococcus
abyssi]
Length = 481
Score = 54.7 bits (129), Expect = 1e-06
Identities = 77/316 (24%), Positives = 136/316 (42%), Gaps = 34/316 (10%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLL-ERGVPGGQMNNTAEIENYPGYETIMGPEL 63
K D+++IG GPAGM AA+ + K +L+ E + GGQ+ + + G +
Sbjct: 119 KSDIIVIGGGPAGMMAAISAHDAGAKVVLIDENPMLGGQL--VKQTHKFFGKRSQFAGVR 176
Query: 64 SMKMAEPLEG-LGVENAYGFV----TAIEDHGDYKKII-----TEDDEFVTKSIIIATGA 113
+K+AE LE + N F+ I G+ K ++ +E E ++II+ATGA
Sbjct: 177 GVKIAEILENEVKKRNIEVFLQTSAVGIFQDGNEKIVVGIRKESELIELHGRAIIVATGA 236
Query: 114 NHRKL-----EIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQ 168
+ + ++PG YGA + G ++ L++G G+ + A L + G
Sbjct: 237 MEKSVPFENNDLPG--IYGAGAIQTLMNTYGV-KPGEKALIVGAGNVGLILAYQLIQAGV 293
Query: 169 SVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVY---KNVKTGE 225
V + + + + + + +G +K +++V +N +
Sbjct: 294 KVEAIVEAMPKIGGYFVHAAKVRRLGVPILTRHTILRAEGKEKVERAIVAQIDENWRPIP 353
Query: 226 VTEKAFGG--IFIYVGLDPVAEFAGNLG-----ITDEAGWI-ITDDHMRTSLPGIFAVGD 277
TEK F I I VGL P E G + + G + + D+ + T++ GIF GD
Sbjct: 354 GTEKIFDVDLIAIAVGLRPSIELLQQAGCQIRYVRELGGHVAVRDEWLETTVRGIFVAGD 413
Query: 278 VRQKDFRQITTAIGDG 293
+ TTA+ +G
Sbjct: 414 T--AGIEEATTAMLEG 427
sp|P95596|DLDH_RHOCA DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE AND
2-OXOGLUTARATE DEHYDROGENASES COMPLEXES) >gi|1814070
(U84577) dihydrolipoamide dehydrogenase [Rhodobacter
capsulatus]
Length = 454
Score = 54.7 bits (129), Expect = 1e-06
Identities = 76/306 (24%), Positives = 131/306 (41%), Gaps = 40/306 (13%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQMNNTAEI-------------E 50
++DV+IIG GP G A+ A+ +KT +E RG GG N I E
Sbjct: 3 EFDVIIIGGGPGGYVCAIRCAQLGLKTACVEGRGALGGTCLNVGCIPSKALLHATHELHE 62
Query: 51 NYPGYET--IMGPELSMKMAEPLEG--LGVENAY--GFVTAIEDHGDYK---KIITEDDE 101
+ +E +MG ++ + A+ ++G G+E + VT + G ++ D+
Sbjct: 63 VHENFEKMGLMGAKVKVDWAK-IDGNTKGIEFLFKKNKVTYLRGWGSIPAPGQVKVGDEV 121
Query: 102 FVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEAL 161
K+I+IATG+ L PG E V+ A + ++VIG G +E
Sbjct: 122 HTAKNIVIATGSESSGL--PGIEIDEQTVVTSTGALSLAKV-PKSMVVIGAGVIGLELGS 178
Query: 162 YLTRFGQSVTIMHRRDKLRA---QEIIQ--QRAFKEEKINFIWDSVPMEIKGDDK-KVQS 215
R G VT++ D + E+ + QR + + F+ + ++G DK K ++
Sbjct: 179 VYARLGAEVTVVEYLDAITPGMDAEVAKGLQRILTRQGLKFVLGAA---VQGVDKAKGKN 235
Query: 216 VVYKNVKTGEVTEKAFGG-IFIYVGLDPVAEFAGNLGITDE---AGWIITDDHMRTSLPG 271
V ++ E + + G P + G + E G + D H T++PG
Sbjct: 236 TVRYTLRKDESAHAIEAEVVLVATGRKPFTKGLGLEALGVEMLPRGQVKADSHWATNVPG 295
Query: 272 IFAVGD 277
++A+GD
Sbjct: 296 LYAIGD 301
gb|AAD36707.1|AE001806_17 (AE001806) glutamate synthase, beta subunit [Thermotoga maritima]
Length = 468
Score = 53.9 bits (127), Expect = 2e-06
Identities = 87/337 (25%), Positives = 143/337 (41%), Gaps = 52/337 (15%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER-GVPGGQMNNTAEIENYPGYETIMGPE 62
KK V ++GSGPAG+TAA A+ + E PGG + I + + I+ E
Sbjct: 139 KKEKVAVVGSGPAGLTAAADLAKMGYHVDIFEAFHKPGGVL--VYGIPEFRLPKRIVERE 196
Query: 63 LSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRK-LEIP 121
+S + LGV + T + K++++E D ++ I TGA K + IP
Sbjct: 197 VSY-----IRKLGVN--FHLNTVVGKTVKVKELLSEYD-----AVFIGTGAGTPKFMGIP 244
Query: 122 GEEEYGARGVSYCAV------------CDGAFFRNQEILVIGGGDSAVEEALYLTRFG-Q 168
G G + D +++ VIG G++A++ A R G +
Sbjct: 245 GTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTAMDAARSALRLGAE 304
Query: 169 SVTIMHRRD--KLRAQEIIQQRAFKEEKINFIWDSVPMEIKGD---DKKVQSVVYKNVK- 222
V I++RR ++ A+ A EE I F+W ++P+ GD + + V +K
Sbjct: 305 KVYIVYRRTEREMPARREEYHHAL-EEGIEFLWLTLPIRYIGDANGNVEAMECVRMELKE 363
Query: 223 ---TGEVTEKAFGGIFIYVGLDPVAEFAGN----------LGI-TDEAGWIITD-DHMRT 267
+G G + +D V E G G+ +E G+I D D T
Sbjct: 364 ADGSGRPRPVPIEGSNFVLEVDMVIEAIGQGPNRVLLSEFPGLELNERGYIKADEDTGAT 423
Query: 268 SLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
S+ G+FA GD+ + A+G G +AAQ + ++
Sbjct: 424 SVKGVFAGGDI-VTGAATVIKAMGAGKKAAQFIHSYL 459
gi|1788468 (AE000303) putative oxidoreductase [Escherichia coli]
Length = 412
Score = 53.1 bits (125), Expect = 3e-06
Identities = 73/309 (23%), Positives = 139/309 (44%), Gaps = 41/309 (13%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGV-PGGQMNNTAEIENYPGYETIMGPELSMK 66
V IIG+GPAG+ A++ + E+ PGG + N P ++++ E++
Sbjct: 127 VAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLP--QSVLDAEIAR- 183
Query: 67 MAEPLEGLGV----ENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPG 122
+E +GV N G +E + ++ V ++ +++G+ E
Sbjct: 184 ----IEKMGVTIKCNNEVGNTLTLEQ-------LKAENRAVLVTVGLSSGSGLPLFE-HS 231
Query: 123 EEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFG-QSVTIMHRR--DKL 179
+ E + G Q L+IGGGD A++ A L G Q+VT + R D+
Sbjct: 232 DVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEF 291
Query: 180 RAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVK-TGEVT---EKAFGGIF 235
A E + + +E ++ I P+ ++G+ V +K+V+ +GE+T +K +
Sbjct: 292 PASE-KEFTSARELGVSIIDGFTPVAVEGN-----KVTFKHVRLSGELTMAADKIILAVG 345
Query: 236 IYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQ 295
+ LD AE + + I T ++ +T P +FA GD+ + D + + A+ G +
Sbjct: 346 QHARLDAFAE------LEPQRNTIKTQNY-QTRDPQVFAAGDIVEGD-KTVVYAVKTGKE 397
Query: 296 AAQEAYKFV 304
AA+ + ++
Sbjct: 398 AAEAIHHYL 406
emb|CAA71191| (Y10104) mercuric reductase [Bacillus cereus]
Length = 266
Score = 51.9 bits (122), Expect = 7e-06
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPG-----------------GQMNN 45
E YD +IIGSG A ++A+ + K ++ERG G G++N+
Sbjct: 59 EGDYDYIIIGSGGAAFSSAIEAVKYGAKVAMIERGTIGGTCVNIGCVPSKTLLRAGEINH 118
Query: 46 TAEIENYPGYETIMGP-ELSMKMAEPLEGLGVENAYGFVTAIEDHG-----------DYK 93
A+ + G T G +L+ + + E + +V I+D+G D K
Sbjct: 119 LAKNNPFVGLHTSAGEVDLAPLIKQKNELVTELRNSKYVDLIDDYGFELIEGEAKFVDEK 178
Query: 94 KIITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEILVIG 151
+ K +IATGA+ K IPG E V Y + + ++VIG
Sbjct: 179 TVEVNGAPISAKRFLIATGASPAKPNIPGLNE-----VDYLTSTSLLELKKVPKRLVVIG 233
Query: 152 GGDSAVEEALYLTRFGQSVTIMHRRDKL 179
G +E G VT++ R ++L
Sbjct: 234 SGYIGMELGQLFHNLGSEVTLIQRSERL 261
gi|2983078 (AE000688) putative protein [Aquifex aeolicus]
Length = 203
Score = 51.5 bits (121), Expect = 9e-06
Identities = 48/180 (26%), Positives = 82/180 (44%), Gaps = 20/180 (11%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERG-----VPGGQMN-NTAEIENYPGYET- 57
+YDVVI+G GPAG+ A+ A S+ + G + G+ + N A + N PG
Sbjct: 2 RYDVVIVGGGPAGLACALTLASSQGRGWEWAEGKKFLVIDNGRSDLNKAMLNNVPGIPMG 61
Query: 58 IMGPELSMKMAEPLEGL--GVENAYGFVTAIE-DHGDYKKIITEDDEFVTKSIIIATGAN 114
+GPEL K+ E ++ VE VT +E + G++K F + +++A+G +
Sbjct: 62 TLGPELLEKIREQIKATNDSVEFLEDTVTKVEGEKGNFKVHTQSGKVFEAEYVVLASGFH 121
Query: 115 HRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMH 174
++E G E V + + ++V GD V E L++ V+ M+
Sbjct: 122 KFEIECEGVE----------VVDNPKSPKPGRVMVKHDGDYKVREGLFVAGLLAGVSSMY 171
emb|CAA17417| (AL021933) hypothetical protein Rv0462 [Mycobacterium tuberculosis]
Length = 464
Score = 51.2 bits (120), Expect = 1e-05
Identities = 76/319 (23%), Positives = 127/319 (38%), Gaps = 58/319 (18%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSM 65
YDVV++G+GP G AA+ A+ + T ++E GG N I P + EL
Sbjct: 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCI---PSKALLRNAELVH 60
Query: 66 KMAEPLEGLGVENAYGF----------------------------VTAIEDHG---DYKK 94
+ + G+ F +T I +G D
Sbjct: 61 IFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANT 120
Query: 95 IITEDDEFVTKSI-----IIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRN--QEI 147
++ + ++ T+S+ IIATG++ R +PG A V+Y + R + I
Sbjct: 121 LLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTS-LSANVVTYE---EQILSRELPKSI 174
Query: 148 LVIGGGDSAVEEALYLTRFGQSVTIMH-------RRDKLRAQEIIQQRAFKEEKINFIWD 200
++ G G +E L +G VTI+ D ++EI +Q FK+ + +
Sbjct: 175 IIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQ--FKKLGVTILTA 232
Query: 201 SVPMEIKGDDKKVQSVVYKNVKTGEV-TEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWI 259
+ I +V V K+ E+ EK I ++ + +TD I
Sbjct: 233 TKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKA-I 291
Query: 260 ITDDHMRTSLPGIFAVGDV 278
DD+MRT++ I+A+GDV
Sbjct: 292 GVDDYMRTNVGHIYAIGDV 310
pir||S57658 glutathione reductase - Plasmodium falciparum
>gi|886900|emb|CAA60574| (X87095) thioredoxin reductase
[Plasmodium falciparum]
Length = 541
Score = 50.8 bits (119), Expect = 2e-05
Identities = 89/354 (25%), Positives = 139/354 (39%), Gaps = 70/354 (19%)
Query: 6 YDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP---------GGQMNNTA----EIENY 52
YD V+IG GP GM +A A + LL + P GG N ++ +Y
Sbjct: 42 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHY 101
Query: 53 PGYETIMGPELSMKMAEPLEGLGVENAYG----FVTAIEDH------------------- 89
G+ MG K+ G +N VT ++ H
Sbjct: 102 AGH---MGS--IFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKY 156
Query: 90 -------------GDYKKIITEDDEFVT-KSIIIATGANHRKLEIPGEEEYGARGVSYCA 135
Y K +E VT K I+IATG + IP + E GA+ +S +
Sbjct: 157 INGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGC---RPHIPDDVE-GAKELSITS 212
Query: 136 VCDGAFFRNQE---ILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA---QEIIQQRA 189
D F ++ LV+G A+E + +L G VT+ R LR Q ++ +
Sbjct: 213 --DDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKL 270
Query: 190 FKEEK-INFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG 248
+ EE+ + F +P ++ D K+ +V + KT E+ + I +D + +
Sbjct: 271 YMEEQGVMFKNGILPKKLTKMDDKI--LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESL 328
Query: 249 NLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
N+ + II D T++P IFAVGDV + AI G A+ +K
Sbjct: 329 NMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 382
gb|AAD08209.1| (AE000622) thioredoxin reductase (trxB) [Helicobacter pylori 26695]
Length = 324
Score = 50.4 bits (118), Expect = 2e-05
Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 44/333 (13%)
Query: 1 MTEKKYDVVIIGSGPAGMTAA-----------MYTARSEMKTLLLERGVPGGQM------ 43
M ++ DV+I+G+GP G+ A + ++E + +LE+ G+
Sbjct: 1 MNQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYK 60
Query: 44 NNTAEIENYPGYETIMGPELSMKMAEPLEGLGVENAYGF-VTAIEDHGDYKKIITEDDE- 101
E++ + ++ E L+ + +Y + +++ G+Y KI T +
Sbjct: 61 KQVVELKGHIPFKDSFKEETLENFTNLLKEHHITPSYKTDIESVKKEGEYFKITTTSNTT 120
Query: 102 FVTKSIIIATGANHRKLEIPGEEEYGARGVSY---CAVCDGAFF------RNQEILVIGG 152
+ K +++A G K+ P R +Y A+ F N++ LVIGG
Sbjct: 121 YHAKFVVVAIG----KMGQPN------RPTAYKIPVALSKQVVFSINDCKENEKTLVIGG 170
Query: 153 GDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK 212
G+SAVE A+ L + + +++ R E + + N + + ++I+ ++
Sbjct: 171 GNSAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLNNNTLKSKLGVDIESLEED 230
Query: 213 VQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGW---IITDDHMRTSL 269
+ V + T ++F + +G EF + + ++ ++ ++
Sbjct: 231 NTQI---KVNFTDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNI 287
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
P +F VGD+ K I TA+ G A E K
Sbjct: 288 PNLFIVGDILFKSGASIATALNHGYDVAIEIAK 320
pir||S35706 NADH oxidase - Thermoanaerobacter brockii
Length = 651
Score = 49.2 bits (115), Expect = 4e-05
Identities = 55/172 (31%), Positives = 78/172 (44%), Gaps = 18/172 (10%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYETIMGPEL 63
K VV++G GPAGM AA+ A+ + +L E+ GGQ+ + PG I
Sbjct: 385 KKKVVVVGGGPAGMQAAITAAKRGHQVILYEKKQHLGGQLEIAS---TSPGKAKIKW--F 439
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ L GVE G VTA D + I ++V I+ATG+ I G
Sbjct: 440 RDWLEAELSRAGVEVRSG-VTA-----DAETIAALSPDYV----ILATGSEPVTPRIKGA 489
Query: 124 EEYGARGVSYCAVCDG--AFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIM 173
E+ V G +F +++E++VIGGG E A YL G VTI+
Sbjct: 490 EKENTFVFQAWDVLAGKVSFDKDEEVVVIGGGLVGCETAHYLAEKGAKVTIV 541
gi|3169863 (AF031406) NADPH dependent glutamate synthase small subunit
homolog838 [Rhodobacter capsulatus]
Length = 443
Score = 48.8 bits (114), Expect = 6e-05
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 37/320 (11%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGP 61
TEK V ++G+GPAG+ A A + + + + G +N I Y
Sbjct: 141 TEKS--VAVVGAGPAGLACAHRLAMLGHEVTVYDARLKPGGLNEYG-IAAYKAPGGFAAR 197
Query: 62 ELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATG-ANHRKLEI 120
E++ + + G+ V + + +G ++ E D ++ + G A L I
Sbjct: 198 EVAWLLQ--IGGIAVLENW----KLGRNGSVADLLAEHD-----AVFLGMGLAGVNALTI 246
Query: 121 PGEEEYGARGVSYCAVCDGAFFR-----NQEILVIGGGDSAVEEALYLTRFG-QSVTIMH 174
PG E + + A A + ++VIGGG +AV+ A+ G ++ +I++
Sbjct: 247 PGAE-HATPATEFIAHLRQAGDLATVPVGRRVVVIGGGMTAVDAAVQAKLLGAETASIVY 305
Query: 175 RRDKLRAQEIIQQRAFKEEK-INFIWDSVPMEIKGDDK-------KVQSVVYKNVKTGEV 226
RR + ++ ++ + + ++ P+ I+ DD+ + ++ K V+ +
Sbjct: 306 RRSQAEMPASAHEQEHAQKNGVRIVPNAAPVAIRKDDQGYEVEFARTETQGGKLVQLDDT 365
Query: 227 TEKAFGGIFIYVG--LDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQKDFR 284
IF +G L PV E G+T G I D RT + ++A GD
Sbjct: 366 LRIKADQIFTAIGQTLGPVPE-----GLTITGGKIEIDAQGRTGMAHVWAGGDCATGGED 420
Query: 285 QITTAIGDGAQAAQEAYKFV 304
TA+ G AA++ + F+
Sbjct: 421 LTVTAVAQGRDAAEDIHAFL 440
gi|2649644 (AE001038) NADH oxidase (noxA-4) [Archaeoglobus fulgidus]
Length = 429
Score = 48.8 bits (114), Expect = 6e-05
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 26/287 (9%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS 64
KYD VIIG+ G+ ++ + +L + A I Y + I ++
Sbjct: 2 KYDYVIIGNSAGGIGCVEAIRELDVDSSILVISAEKYHAYSRALIPYYLDGK-IEFEKMY 60
Query: 65 MKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVT-KSIIIATGANHRKLEIPGE 123
+ + E + VE G V A+ + KK++ E E V ++IATG K IP
Sbjct: 61 YRPPDFYEKMDVETKLG-VRAVGVDVEAKKVLLESGEEVEYGKLLIATGG---KPFIPPM 116
Query: 124 EEYGARG-------VSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRR 176
E G + + + A ++ +V+GGG + + L + G V ++
Sbjct: 117 EGLGGQSNVFTFLKMDDVLAVEKAIKEAKKAVVLGGGIIGLMASEVLAKKGLDVKVVELA 176
Query: 177 DKLRAQEI------IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKA 230
D++ A + I +R F+E + I ++ ++ G++ +V+ V+ ++ + E
Sbjct: 177 DRVLAPVVDETTSRIVERKFEENGVEIILNNTISKVVGEE-RVEKVILRDGRELEADM-- 233
Query: 231 FGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGD 277
+ + VG+ P + N I G I+ + M TS+ ++A GD
Sbjct: 234 ---LLVAVGVVPNVDIVKNTPIKVNRG-IVVNRKMETSVKDVYACGD 276
sp|P43783|GSHR_HAEIN GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|1074147|pir||A64052
glutathione reductase (NADPH) (EC 1.6.4.2) - Haemophilus
influenzae (strain Rd KW20) >gi|644854 (U20229)
glutathione reductase [Haemophilus influenzae]
>gi|1573119 (U32702) glutathione reductase (gor)
[Haemophilus influenzae Rd]
Length = 456
Score = 48.8 bits (114), Expect = 6e-05
Identities = 76/343 (22%), Positives = 129/343 (37%), Gaps = 58/343 (16%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEI------------EN 51
K YD + IG G G+ + A K ++E GG N + E
Sbjct: 3 KHYDYIAIGGGSGGIASLNRAASYGKKCAIIEAKHLGGTCVNVGCVPKKVMFYGAHIAEA 62
Query: 52 YPGYETIMGPELSMKMAEPLEGLGVENAY---------------------GFVTAIEDHG 90
Y G ++ +K + + + AY GF ++ H
Sbjct: 63 INNYAPDYGFDVEVKKFDFSKLIESRQAYISRIHTSYNNVLAKNNIDVINGFGKFVDAHT 122
Query: 91 DYKKIITEDDEFVTKS-IIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILV 149
+ E VT I+IATG + I G +EYG + A+ + + V
Sbjct: 123 IEVTLADGTKEQVTADHILIATGGRPYRPNIKG-QEYGIDSDGFFALTE----LPKRAAV 177
Query: 150 IGGGDSAVEEALYLTRFGQSVTIMHRR-------DKLRAQEIIQQRAFKEEKINFIWDSV 202
IG G AVE + L G ++ RR D L + +++ A ++ I +S
Sbjct: 178 IGAGYIAVELSGVLNSLGVETHLLVRRHAPMRNQDPLIVETLVEVLA--QDGIQLHTNST 235
Query: 203 PMEI-KGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGI-TDEAGW 258
P EI K D + V+ ++ + G P + G N G+ T+E G+
Sbjct: 236 PSEIVKNADGSL------TVRCDGQSDVTVDCVIWAAGRVPTTDKIGLENAGVETNEHGY 289
Query: 259 IITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAY 301
+ D + T++ GI+AVGD+ + A+ G + ++ +
Sbjct: 290 VKVDKYQNTNVKGIYAVGDIIENGIELTPVAVAAGRRLSERLF 332
sp|P32382|NADO_THEBR NADH OXIDASE >gi|98755|pir||S25102 NADH oxidase -
Thermoanaerobacter brockii >gi|48123|emb|CAA47660|
(X67220) NADH oxidase [Thermoanaerobacter brockii]
Length = 651
Score = 48.8 bits (114), Expect = 6e-05
Identities = 55/172 (31%), Positives = 78/172 (44%), Gaps = 18/172 (10%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVP-GGQMNNTAEIENYPGYETIMGPEL 63
K VV++G GPAGM AA+ A+ + +L E+ GGQ+ + PG I
Sbjct: 385 KKKVVVVGGGPAGMQAAITAAKRGHQVILYEKKQHLGGQLEIASA---SPGKAKIKW--F 439
Query: 64 SMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRKLEIPGE 123
+ L GVE G VTA D + I ++V I+ATG+ I G
Sbjct: 440 RDWLEAELSRAGVEVRSG-VTA-----DAETIAALSPDYV----ILATGSEPVTPRIKGA 489
Query: 124 EEYGARGVSYCAVCDG--AFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIM 173
E+ V G +F +++E++VIGGG E A YL G VTI+
Sbjct: 490 EKENTFVFQAWDVLAGKVSFDKDEEVVVIGGGLVGCETAHYLAEKGAKVTIV 541
sp|P94702|MERA_ENTAG MERCURIC REDUCTASE (HG(II) REDUCTASE) >gi|1743231|emb|CAA70184|
(Y08992) mercuric ion reductase [Enterobacter
agglomerans]
Length = 561
Score = 48.4 bits (113), Expect = 8e-05
Identities = 81/342 (23%), Positives = 124/342 (35%), Gaps = 66/342 (19%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENY---------- 52
E+ VV+IGSG A M AA+ + L+ERG GG N + +
Sbjct: 96 ERPLQVVVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRVAHIAH 155
Query: 53 ------------PGYETIMGPELSMKMAEPLEGL------GVENAYGFVTAIEDHGDYKK 94
P TI+ L + +E L G+ + +T + +K
Sbjct: 156 LRRESPFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFK- 214
Query: 95 IITEDDEFVTKSI-------------IIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF 141
DD+ + S+ ++ATGA+ IPG +E + D
Sbjct: 215 ----DDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTI- 269
Query: 142 FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL-RAQEIIQQR---AFKEEKINF 197
+ + VIG A+E A R G VT + R R I + AF+ E I
Sbjct: 270 --PERLAVIGSSVVALELAQAFARLGSKVTALARNTLFFREDPAIGEAVTAAFRAEGIEV 327
Query: 198 IWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP----VAEFAGNLGIT 253
+ + ++ D + V T E + + G P +A A + +
Sbjct: 328 LEHTQASQVAHMDGEF-------VLTTTHGELRADKLLVATGRTPNTRSLALEAAGVAVN 380
Query: 254 DEAGWIITDDHMRTSLPGIFAVGD-VRQKDFRQITTAIGDGA 294
+ G I+ D MRTS P I+A GD Q F + A G A
Sbjct: 381 AQ-GAIVIDKGMRTSSPNIYAAGDCTDQPQFVYVAAAAGTRA 421
pir||S55381 glutathione reductase - Plasmodium falciparum (fragment)
Length = 471
Score = 48.4 bits (113), Expect = 8e-05
Identities = 57/214 (26%), Positives = 99/214 (45%), Gaps = 15/214 (7%)
Query: 96 ITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE---ILVIGG 152
+++++ K I+IATG + IP + E GA+ +S + D F ++ LV+G
Sbjct: 131 LSKEETVTGKYILIATGC---RPHIPDDVE-GAKELSITS--DDIFSLKKDPGKTLVVGA 184
Query: 153 GDSAVEEALYLTRFGQSVTIMHRRDKLRA---QEIIQQRAFKEEK-INFIWDSVPMEIKG 208
A+E + +L G VT+ R LR Q ++ + + EE+ + F +P ++
Sbjct: 185 SYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTK 244
Query: 209 DDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTS 268
D K+ +V + KT E+ + I +D + + N+ + II D T+
Sbjct: 245 MDDKI--LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTN 302
Query: 269 LPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
+P IFAVGDV + AI G A+ +K
Sbjct: 303 IPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 336
emb|CAA58583| (X83603) thioredoxin reductase [Plasmodium falciparum]
Length = 471
Score = 48.4 bits (113), Expect = 8e-05
Identities = 57/214 (26%), Positives = 99/214 (45%), Gaps = 15/214 (7%)
Query: 96 ITEDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQE---ILVIGG 152
+++++ K I+IATG + IP + E GA+ +S + D F ++ LV+G
Sbjct: 131 LSKEETVTGKYILIATGC---RPHIPDDVE-GAKELSITS--DDIFSLKKDPGKTLVVGA 184
Query: 153 GDSAVEEALYLTRFGQSVTIMHRRDKLRA---QEIIQQRAFKEEK-INFIWDSVPMEIKG 208
A+E + +L G VT+ R LR Q ++ + + EE+ + F +P ++
Sbjct: 185 SYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTK 244
Query: 209 DDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTS 268
D K+ +V + KT E+ + I +D + + N+ + II D T+
Sbjct: 245 MDDKI--LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTN 302
Query: 269 LPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
+P IFAVGDV + AI G A+ +K
Sbjct: 303 IPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 336
gi|832876 (L41345) ascorbate free radical reductase [Solanum lycopersicum]
>gi|1097368|prf||2113407A ascorbate free radical
reductase [Lycopersicon esculentum]
Length = 433
Score = 48.4 bits (113), Expect = 8e-05
Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 40/308 (12%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMK----TLLLERGVPGGQMNNTAEIENYP--- 53
M EK + VI+G G + AA A+ +K ++ + V + ++ +P
Sbjct: 1 MAEKSFKYVIVGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGA 60
Query: 54 ----GYETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIII 109
G+ +G ++ E G+ D + + F ++++I
Sbjct: 61 ARLPGFHVCVGSGGERQLPEWYAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVI 120
Query: 110 ATGANHRKLEIPGEEEYGARGVSYCAVCDGA--------FFRNQEILVIGGGDSAVEEAL 161
ATG KL G + ++ + Y D A +N + +V+GGG +E +
Sbjct: 121 ATGTTVLKLSDFGVQGADSKNIFYLREIDDADQLVEALKAKKNGKAVVVGGGYIGLELSA 180
Query: 162 YLTRFGQSVTIMHRRD----KLRAQEI--IQQRAFKEEKINFIWDSVPMEI----KGDDK 211
L V +++ +L + I + +K + +N I +V + G+ K
Sbjct: 181 VLRLNNIEVNMVYPEPWCMPRLFTEGIAAFYEGYYKNKGVNIIKGTVAVGFDTHPNGEVK 240
Query: 212 KVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAE-FAGNLGITDEAGWIITDDHMRTSLP 270
+V+ +K G V E + + VG P+ F G + +E G I TD +TS+P
Sbjct: 241 EVK------LKDGRVLEADI--VVVGVGARPLTTLFKGQ--VEEEKGGIKTDAFFKTSVP 290
Query: 271 GIFAVGDV 278
++AVGDV
Sbjct: 291 DVYAVGDV 298
gi|2792490 (AF041467) coenzyme A disulfide reductase [Staphylococcus aureus]
Length = 438
Score = 48.0 bits (112), Expect = 1e-04
Identities = 58/242 (23%), Positives = 100/242 (40%), Gaps = 27/242 (11%)
Query: 80 YGFVTAIEDHGDYKKIIT----EDDEFVTKSIIIATGANHRKLEIPGEEEYGARGVSYCA 135
Y V AI D ++ E E +I++ GA+ L + + R +
Sbjct: 78 YHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTD 137
Query: 136 VCDGAFFRNQ--EILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRA-------QEIIQ 186
D NQ ++LV+G G ++E L G T++HR DK+ Q I+
Sbjct: 138 AIDQFIKANQVDKVLVVGAGYVSLEVLENLNERGLHPTLIHRSDKINKLMDADMNQPILD 197
Query: 187 QRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEF 246
+ + +I + + I G++ + +K+ K + + I VG P ++F
Sbjct: 198 E--LDKREIPYRLNEEINAINGNE-----ITFKSGKV-----EHYDMIIEGVGTHPNSKF 245
Query: 247 AGNLGIT-DEAGWIITDDHMRTSLPGIFAVGDVRQKDFRQI-TTAIGDGAQAAQEAYKFV 304
+ I D G+I +D T++P I+A+GD+ +R + A A A A V
Sbjct: 246 IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIV 305
Query: 305 AE 306
AE
Sbjct: 306 AE 307
emb|CAA70231| (Y09025) mercuric reductase [Enterobacter cloacae]
Length = 561
Score = 48.0 bits (112), Expect = 1e-04
Identities = 81/342 (23%), Positives = 124/342 (35%), Gaps = 66/342 (19%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENY---------- 52
E+ VV+IGSG A M AA+ + L+ERG GG N + +
Sbjct: 96 ERPLQVVVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRVAHIAH 155
Query: 53 ------------PGYETIMGPELSMKMAEPLEGL------GVENAYGFVTAIEDHGDYKK 94
P TI+ L + +E L G+ + +T + +K
Sbjct: 156 LRRESPFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFK- 214
Query: 95 IITEDDEFVTKSI-------------IIATGANHRKLEIPGEEEYGARGVSYCAVCDGAF 141
DD+ + S+ ++ATGA+ IPG +E + D
Sbjct: 215 ----DDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTI- 269
Query: 142 FRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL-RAQEIIQQR---AFKEEKINF 197
+ + VIG A+E A R G VT + R R I + AF+ E I
Sbjct: 270 --PERLAVIGSSVVALELAQAFARLGSKVTALARNTLFFREDPAIGEAVTAAFRAEGIEV 327
Query: 198 IWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDP----VAEFAGNLGIT 253
+ + ++ D + V T E + + G P +A A + +
Sbjct: 328 LEHTQASQVAHMDGEF-------VLTTTHGELRADKLLVATGRTPNTRSLALEAAGVAVN 380
Query: 254 DEAGWIITDDHMRTSLPGIFAVGD-VRQKDFRQITTAIGDGA 294
+ G I+ D MRTS P I+A GD Q F + A G A
Sbjct: 381 AQ-GAIVIDKGMRTSSPNIYAAGDCTDQPQFVYVAAAAGTRA 421
gi|887828 (U28375) was o492p and o826p before splice [Escherichia coli]
>gi|1789243 (AE000371) putative oxidoreductase, Fe-S
subunit [Escherichia coli]
Length = 1032
Score = 48.0 bits (112), Expect = 1e-04
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 50/318 (15%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGV-PGGQMNNTAEIENYPGYETIMGPEL 63
++ V +IG+GPAG+ A + AR+ L ER GG + N P EL
Sbjct: 550 RHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPA-------EL 602
Query: 64 SMKMAEPLEGLGVENAYG-----FVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHRK- 117
+ + GV+ YG + +++ G + ++IATG +
Sbjct: 603 IQHDIDFVAAHGVKFEYGCSPDLTIEQLKNQGFH-------------YVLIATGTDKNSG 649
Query: 118 LEIPGEEEYGARGVSYCAVCD--GAFFRNQEILVIGGGDSAVEEALYLTRFG--QSVTIM 173
+++ G+ + + + + + A + ++V+G G++A++ A R + TI+
Sbjct: 650 VKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIV 709
Query: 174 HRRDKLRAQEIIQQRAFKEEK----INFIWDSVPMEIKGDDKKVQSVV----------YK 219
+RR QE+ R EE + F + + P D V+ +
Sbjct: 710 YRRS---LQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRR 766
Query: 220 NVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGI-TDEAGWIITDDHMRTSLPGIFAVGDV 278
V+T E + +G E +G+ D+ GW D + T L +F +GDV
Sbjct: 767 PVETNETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDV 826
Query: 279 RQKDFRQITTAIGDGAQA 296
Q+ I A+G +A
Sbjct: 827 -QRGPSSIVAAVGTARRA 843
emb|CAB69774.1| (AL137187) putative nitrite reductase [Streptomyces coelicolor
A3(2)]
Length = 410
Score = 46.1 bits (107), Expect = 4e-04
Identities = 69/289 (23%), Positives = 115/289 (38%), Gaps = 28/289 (9%)
Query: 5 KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELS 64
K VV+IG+G AG+T A L E G P + + E+ P ++ L+
Sbjct: 4 KTRVVVIGAGLAGVTLARR---------LGELGTPALTLGDE---EHRPYNRVLLAEVLA 51
Query: 65 MKMAEPLEGLGVENAY--GFVTAIEDHGDYKKIITEDDEFVT-KSIIIATGANH-----R 116
+ + L G VT I+ G + + D + ++++ATG+N R
Sbjct: 52 GRYGPEVIALPAPAGLLRGRVTGIDRAG--RTVRCADGSVIAYDTLVLATGSNAVLPPLR 109
Query: 117 KLEIPGEE----EYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTI 172
L P E + R + C A +VIGGG V A L G V +
Sbjct: 110 GLFTPDHELPEGVHAFRTMDDCLGLSKAVRPGVRAVVIGGGLLGVSAARALAVRGAQVVL 169
Query: 173 MHRRDKLRAQEIIQQR-AFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAF 231
+ ++L +++ A + + V E + D + ++V+ G+
Sbjct: 170 AQQSERLMERQLDPAASALVRRHLEGLGVEVHTECRVRDVRSVGGAVRSVEMGDGYALGA 229
Query: 232 GGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDVRQ 280
+ + G+ P A A G+ G ++ DD +RTS P I A+GD Q
Sbjct: 230 DLVVLACGVRPRAGLAREAGLAVGKG-VLVDDELRTSDPHIRAIGDCAQ 277
dbj|BAA12349| (D84417) monodehydroascorbate reductase [Arabidopsis thaliana]
Length = 533
Score = 46.1 bits (107), Expect = 4e-04
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 106 SIIIATGANHRKL------EIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEE 159
S+IIATG + +PG + R V+ + + ++I+++GGG +E
Sbjct: 172 SLIIATGCTASRFPDKIGGHLPGV--HYIREVADADSLIASLGKAKKIVIVGGGYIGMEV 229
Query: 160 ALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEK------INFIWDSVPMEIK-GDDKK 212
A + TI+ D+L + A K E+ + F+ + ++ G D +
Sbjct: 230 AAAAVAWNLDTTIVFPEDQLLQRLFTPSLAQKYEELYRQNGVKFVKGASINNLEAGSDGR 289
Query: 213 VQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGI 272
V +V + T E G +G P L + G I D RTS PGI
Sbjct: 290 VSAVKLADGSTIEADTVVIG-----IGAKPAIGPFETLAMNKSIGGIQVDGLFRTSTPGI 344
Query: 273 FAVGDVRQ---KDFRQITTA--IGDGAQAAQEAYK 302
FA+GDV K + ++T + G ++AQ K
Sbjct: 345 FAIGDVAAFPLKIYDRMTRVEHVDHGRRSAQHCVK 379
gi|4155677 (AE001536) putative THIOREDOXIN REDUCTASE [Helicobacter pylori J99]
Length = 324
Score = 45.7 bits (106), Expect = 5e-04
Identities = 66/333 (19%), Positives = 135/333 (39%), Gaps = 44/333 (13%)
Query: 1 MTEKKYDVVIIGSGP-----------AGMTAAMYTARSEMKTLLLERGVPGGQM------ 43
M ++ DV+I+G+GP AG+ + ++E + +LE+ G+
Sbjct: 1 MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYK 60
Query: 44 NNTAEIENYPGYETIMGPELSMKMAEPLEGLGVENAYGF-VTAIEDHGDYKKIITEDDE- 101
E++ + ++ E L+ + +Y + +++ G+ KI T +
Sbjct: 61 KQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGELFKITTTSNTT 120
Query: 102 FVTKSIIIATGANHRKLEIPGEEEYGARGVSY---CAVCDGAFF------RNQEILVIGG 152
+ K +++A G K+ P R +Y A+ F N++ LVIGG
Sbjct: 121 YHAKFVVVAIG----KMGQPN------RPTTYKIPVALSKQVVFSINDCKENEKTLVIGG 170
Query: 153 GDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKK 212
G+SAVE A+ L + + +++ R E + + N + + ++I+ ++
Sbjct: 171 GNSAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEED 230
Query: 213 VQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGW---IITDDHMRTSL 269
+ V + T ++F + +G EF + + ++ ++ ++
Sbjct: 231 NTQI---KVNFTDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNI 287
Query: 270 PGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYK 302
P +F VGD+ K I TA+ G A E K
Sbjct: 288 PNLFIVGDILFKSGASIATALNHGYDVAIEIAK 320
dbj|BAA25627| (D88021) ferredoxin reductase [Rhodococcus erythropolis]
Length = 412
Score = 45.3 bits (105), Expect = 7e-04
Identities = 63/295 (21%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARS----EMKTLLLERGVPGGQMNNTAEIENYPGYE 56
M K VI+G AG++AA+ R+ ++ + + VP + + E+ +
Sbjct: 1 MANAKRHHVIVGGSAAGVSAALSMRRAGFEGQITLVEADTAVPYQRPPLSKSFEDLDSPK 60
Query: 57 TIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGANHR 116
I+ PE++ + V+ G A D + ++ + S+++ATG R
Sbjct: 61 VIV-PEVTY------DDHDVQLLSGERVASLDEDRRRVVLESGTDLQADSVLVATGVLPR 113
Query: 117 KLEIPGEEEYGARGVSYCAVCDGAFFRNQ----EILVIGGGDSAVEEALYLTRFGQSVTI 172
+L +PG++ ++ + D ++ ++V+GGG +E A GQ VT+
Sbjct: 114 RLGVPGDDLNNV--LTLRDINDARALASRLDAGPLVVVGGGFIGLEVAAAARLRGQHVTV 171
Query: 173 MHRRDKLR-------AQEI--IQQRAFKEEKINFIWDSVPMEIKGDDKKVQSVVYKNVKT 223
+ + LR E+ + ++ + + +E++GD V+SV+
Sbjct: 172 I---EALRVPLTGALGDEVGSLVTNMHLARGVHVVTERTVVELRGDG-DVESVI-----L 222
Query: 224 GEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEAGWIITDDHMRTSLPGIFAVGDV 278
+ ++ + + G+ P E A G+ + G I+ D++ +TS I+A GDV
Sbjct: 223 NDGSQLNAATVVVGCGVSPNDELARRAGVFTDNG-IVIDEYGQTSRGWIWAAGDV 276
sp|P54805|YNH2_METBA HYPOTHETICAL 19.9 KD PROTEIN IN NIFH2 5'REGION (ORF186)
>gi|984851 (U32666) orf186 [Methanosarcina barkeri]
Length = 186
Score = 45.3 bits (105), Expect = 7e-04
Identities = 19/34 (55%), Positives = 26/34 (75%)
Query: 3 EKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLER 36
E YDVV++G+GPAG TAAMY A++ LLL++
Sbjct: 4 EASYDVVVVGAGPAGSTAAMYAAKNGASVLLLDK 37
sp|P10331|FIXC_BRAJA FIXC PROTEIN >gi|1209050 (U32228) FixC [Bradyrhizobium japonicum]
Length = 435
Score = 44.9 bits (104), Expect = 9e-04
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
M E+++D +++G+G AG AA+ A+ MK L LERG YPG + + G
Sbjct: 1 MIEERFDAIVVGAGMAGNAAALTMAKQGMKVLQLERG-------------EYPGSKNVQG 47
Query: 61 PELSMKMAEPL 71
L M E L
Sbjct: 48 AILYADMMEKL 58
gi|2650363 (AE001086) sarcosine oxidase, subunit alpha (soxA) [Archaeoglobus
fulgidus]
Length = 534
Score = 44.5 bits (103), Expect = 0.001
Identities = 81/335 (24%), Positives = 129/335 (38%), Gaps = 49/335 (14%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLL-ERGVPGGQM--------NNTAEIEN 51
+ E + DV++IG GP GM+AA+ + K LL+ E GGQ+ + E
Sbjct: 165 LEEIETDVLVIGGGPGGMSAAINAGKYGAKVLLVDENPFLGGQLVKQTHRFFGSAKERAG 224
Query: 52 YPGYETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFV---TKSII 108
G + E + E +E +G + G Y+++ ++ + + K I+
Sbjct: 225 TRGIKIAGILEEELNSIENVEVRRETRVFGIYNG--EAGAYQRLNDDEGKLLRIKAKKIV 282
Query: 109 IATGANHRKL-----EIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYL 163
+ATGA R L ++PG YGA GV G N L++G G+ + L
Sbjct: 283 VATGAYERTLIFENNDLPG--VYGAGGVQTLMNVYGIKPGNMG-LIVGSGNVGLILTYQL 339
Query: 164 TRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKG------DDKKVQSVV 217
+ G +V + + A I K+ + VP+ ++ K V+ V
Sbjct: 340 MQAGVNVAAI-----VEAMPRIGGYFVHAAKVRRL--GVPIYVRHTILKAIGRKSVEGAV 392
Query: 218 YKNVK------TGEVTEKAFGGIFIYVGLDPVAEFAGNLG----ITDEAGWII--TDDHM 265
+ G E I + VGL P E G E G I+
Sbjct: 393 IAQLDDRWQPIPGTEKEIKCDFICVAVGLSPTHELLYQAGCEMKFVPELGGIVPLRTRFN 452
Query: 266 RTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEA 300
TS+ G++ GDV + T AI +G A A
Sbjct: 453 ETSVKGLYVAGDV--AGIEEATAAIMEGRIAGIHA 485
dbj|BAA81436.1| (AP000064) 436aa long hypothetical electoron transfer
flavoprotein-quinone oxidoreductase [Aeropyrum pernix]
Length = 436
Score = 44.1 bits (102), Expect = 0.001
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERG 37
+ E YDVV++G GP G+ AA AR+ K L+LERG
Sbjct: 5 IAEASYDVVVVGGGPGGLAAATVLARAGFKVLVLERG 41
dbj|BAA77214.1| (D85764) cytosolic monodehydroascorbate reductase [Oryza sativa]
Length = 435
Score = 43.4 bits (100), Expect = 0.003
Identities = 70/306 (22%), Positives = 118/306 (37%), Gaps = 38/306 (12%)
Query: 2 TEKKYDVVIIGSGPAGMTAAMYTARSEMK----TLLLERGVPGGQM----------NNTA 47
+EK + VI+G G A AA A+ +K ++ + V + N A
Sbjct: 3 SEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQNAA 62
Query: 48 EIENYPGYETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSI 107
+ PG+ +G + E G+E D F + +
Sbjct: 63 RL---PGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEIL 119
Query: 108 IIATGANHRKLEIPGEEEYGARGVSYCAVCDGA--------FFRNQEILVIGGGDSAVEE 159
IIATG++ KL G + + + Y D A + + +++GGG +E
Sbjct: 120 IIATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLEL 179
Query: 160 ALYLTRFGQSVTIMHRRD----KLRAQEI--IQQRAFKEEKINFIWDSVPMEIKGDDKKV 213
+ L VT++ +L +I + + + + + +V + D
Sbjct: 180 SAALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGD 239
Query: 214 QSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAE-FAGNLGITDEAGWIITDDHMRTSLPGI 272
+ V N+K G V E G+ VG P+ F G + +E G I TD TS+PG+
Sbjct: 240 VTAV--NLKNGSVLEADIVGVG--VGGRPLTTLFKGQ--VAEEKGGIKTDAFFETSVPGV 293
Query: 273 FAVGDV 278
+AVGDV
Sbjct: 294 YAVGDV 299
emb|CAB13727| (Z99113) glutamate synthase (small subunit) [Bacillus subtilis]
>gi|2634238|emb|CAB13737| (Z99114) glutamate synthase
(small subunit) [Bacillus subtilis]
Length = 493
Score = 43.0 bits (99), Expect = 0.003
Identities = 76/348 (21%), Positives = 141/348 (39%), Gaps = 67/348 (19%)
Query: 8 VVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMGPELSMKM 67
V I+GSGPAG+ +A ++ + ER G + T I N + I+ + +
Sbjct: 155 VAIVGSGPAGLASADQLNQAGHSVTVFERADRAGGL-LTYGIPNMKLEKGIVERRIKLLT 213
Query: 68 AEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKSIIIATGA-NHRKLEIPGEEEY 126
E ++ FVT E D I ++ + ++I+ TGA R L I G +
Sbjct: 214 QEGID---------FVTNTEIGVD---ITADELKEQFDAVILCTGAQKQRDLLIEGRDSK 261
Query: 127 GAR-GVSYCAVCDGAFF------------RNQEILVIGGGDSAVE-EALYLTRFGQSVTI 172
G + Y + ++ + ++++VIGGGD+ + A L + +SV
Sbjct: 262 GVHYAMDYLTLATKSYLDSNFKDKQFIDAKGKDVIVIGGGDTGADCVATALRQKAKSVHQ 321
Query: 173 MHRRDKL------------RAQEIIQQRAFKEEKINFIWDSVPMEIK---------GDDK 211
+ KL + + A++E + F D I+ G K
Sbjct: 322 FGKHPKLPPARTNDNMWPEQPHVFTLEYAYEEREAKFGRDPREYSIQTTKMVADKNGKLK 381
Query: 212 KVQSVVYKNVKTGE---------VTEKAFGG--IFIYVGLD----PVAEFAGNLGITDEA 256
++ ++ + VK TEK + +FI +G + P+ + G + ++
Sbjct: 382 ELHTIQMEKVKNEHGKYEFRELPGTEKVWPAQLVFIAIGFEGTEQPLLKQFGVNSVNNKI 441
Query: 257 GWIITDDHMRTSLPGIFAVGDVRQKDFRQITTAIGDGAQAAQEAYKFV 304
D +T++ G+FA GD R+ I AI +G + A+E +++
Sbjct: 442 SAAYGD--YQTNIDGVFAAGDARRGQ-SLIVWAINEGREVAREVDRYL 486
sp|P31046|DLD3_PSEPU DIHYDROLIPOAMIDE DEHYDROGENASE 3 (LPD-3) >gi|94890|pir||S19685
dihydrolipoamide dehydrogenase (EC 1.8.1.4) 3 -
Pseudomonas putida >gi|48791|emb|CAA39235| (X55704)
dihydrolipoamide dehydrogenase [Pseudomonas putida]
Length = 466
Score = 42.6 bits (98), Expect = 0.004
Identities = 73/321 (22%), Positives = 117/321 (35%), Gaps = 54/321 (16%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTARSEMKTLLLE-RGVPGGQ------MNNTAEIENYPGYE 56
K YDVVIIG GP G AA+ + + +E R GG M + A + YE
Sbjct: 2 KSYDVVIIGGGPGGYNAAIRAGQLGLTVACVEGRSTLGGTCLNVGCMPSKALLHASELYE 61
Query: 57 TIMGPELSMKMAEPLEGLGV--------ENAYGFVTAIED----------------HGDY 92
G E + E L + E+ G IE G
Sbjct: 62 AASGDEFAHLGIEVKPTLNLAQMMKQKDESVTGLTKGIEYLFRKNKVDWIKGWGRLDGVG 121
Query: 93 KKIITEDDEFVT----KSIIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFFRNQ--- 145
K ++ +D T K I+IATG+ L PG R + GA Q
Sbjct: 122 KVVVKAEDGSETALQAKDIVIATGSEPTPL--PGVTIDNQRIID----STGALSLPQVPK 175
Query: 146 EILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKL------RAQEIIQQRAFKEEKINFIW 199
++VIG G +E R G VT++ D++ + +Q+ K+ + +
Sbjct: 176 HLVVIGAGVIGLELGSVWRRLGSQVTVIEYLDRICPGTDTETAKTLQKALAKQGMVFKLG 235
Query: 200 DSVPMEIKGDDKKVQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAG--NLGITDEAG 257
V D S+V + G + + +G P + ++G+ +
Sbjct: 236 SKVTQATASADG--VSLVLEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLETDKR 293
Query: 258 WIITDDHMRTSLPGIFAVGDV 278
++ TS+PG++ +GDV
Sbjct: 294 GMLAQRTPPTSVPGVWVIGDV 314
emb|CAA19251| (AL023702) putative flavoprotein oxidoreductase [Streptomyces
coelicolor]
Length = 465
Score = 42.2 bits (97), Expect = 0.006
Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 50/306 (16%)
Query: 4 KKYDVVIIGSGPAGMTAAMYTAR----SEMKTLLLERG-------------VPGGQMNNT 46
K +V+IG AGM+AA R E++ + ERG V G
Sbjct: 9 KSERLVVIGGDAAGMSAASQARRLKGPDELEIVAFERGHFSSFSACGIPYWVGGDVTGRD 68
Query: 47 AEIENYPGYETIMGPELSMKMAEPLEGLGVENAYGFVTAIEDHGDYKKIITEDDEFVTKS 106
A I P +L M+ E ++ A G V A + + ++ D
Sbjct: 69 ALIARTPEEHRARDIDLRMRT----EVTEIDVAGGRVRARDVDSGARSWMSYD------K 118
Query: 107 IIIATGANHRKLEIPGEEEYGARGVSYCAVCDGAFF-------RNQEILVIGGGDSAVEE 159
++I TGA + E+PG + G G+ + DG R + +V+G G VE
Sbjct: 119 LVIGTGARPVRPELPGIDAPGVHGMQ--TLDDGQALLDTLTRTRGRRAVVVGAGYIGVEM 176
Query: 160 ALYLTRFGQSVTIMHR-RDKLRAQEIIQQR----AFKEEKINFIWDS-VPMEIKGDDKKV 213
A L G VT+++R R+ + + R A + I + D+ V + GDD +V
Sbjct: 177 AEALINRGYEVTVVNRGREPMSTLDPDMGRMVHGAMEGLGITMVNDAEVTGVLTGDDGRV 236
Query: 214 QSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFAGNLGITDEA-GWIITDDHMRT-SLPG 271
++V E E + + +G+ P A G+ A G ++TD MR
Sbjct: 237 RAV------ATEDAEFPADVVVLGIGVRPETGLAAAAGLPLGAHGGLLTDLAMRVRGHEN 290
Query: 272 IFAVGD 277
I+A GD
Sbjct: 291 IWAGGD 296
sp|P80892|TRXB_VIBFI THIOREDOXIN REDUCTASE
Length = 45
Score = 42.2 bits (97), Expect = 0.006
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNN 45
M K ++I+GSGPAG TAA+Y AR+ + +++ GGQ+ N
Sbjct: 1 MNVKHSKLLILGSGPAGYTAAVYAARANLNPVMITGMQQGGQLTN 45
sp|P77337|YDIS_ECOLI PROBABLE ELECTRON TRANSFER FLAVOPROTEIN-QUINONE OXIDOREDUCTASE
YDIS >gi|1742778|dbj|BAA15468| (D90812) FixC protein.
[Escherichia coli] >gi|1787991 (AE000265) flavoprotein;
probably electron transport [Escherichia coli]
Length = 429
Score = 42.2 bits (97), Expect = 0.006
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNT 46
M++ K+D +++G+G AG AA+ AR+ + L++ERG G N T
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMT 46
sp|Q53208|FIXC_RHISN FIXC PROTEIN >gi|1486437|emb|CAA92415| (Z68203) FixC homologue
[Rhizobium sp.] >gi|2182667 (AE000100) FixC [Rhizobium
sp. NGR234]
Length = 435
Score = 41.8 bits (96), Expect = 0.008
Identities = 23/71 (32%), Positives = 35/71 (48%), Gaps = 13/71 (18%)
Query: 1 MTEKKYDVVIIGSGPAGMTAAMYTARSEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 60
MTE+++D +++G+G +G AA A +K L LERG YPG + + G
Sbjct: 1 MTEERFDAIVVGAGMSGNAAAYTMASRGLKVLQLERG-------------EYPGSKNVQG 47
Query: 61 PELSMKMAEPL 71
L M E +
Sbjct: 48 AILYANMLETI 58
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.317 0.137 0.391
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86811308
Number of Sequences: 457798
Number of extensions: 3698532
Number of successful extensions: 10506
Number of sequences better than 1.0e-02: 328
Number of HSP's better than 0.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 9581
Number of HSP's gapped (non-prelim): 572
length of query: 308
length of database: 140,871,481
effective HSP length: 56
effective length of query: 252
effective length of database: 115,234,793
effective search space: 29039167836
effective search space used: 29039167836
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 95 (41.4 bits)