Score E
Sequences producing significant alignments: (bits) Value
sp|P25052|TENA_BACSU TRANSCRIPTIONAL ACTIVATOR TENA >gi|730... 164 6e-40
gi|4155800 (AE001546) putative TRANSCRIPTIONAL REGULATOR [H... 109 2e-23
gb|AAD08332.1| (AE000633) transcriptional regulator (tenA) ... 104 7e-22
emb|CAB50005.1| (AJ248286) hypothetical protein [Pyrococcus... 101 7e-21
dbj|BAA79642.1| (AP000060) 228aa long hypothetical transcri... 97 1e-19
sp|P44659|Y358_HAEIN HYPOTHETICAL PROTEIN HI0358 >gi|107536... 96 2e-19
dbj|BAA30261| (AP000005) 218aa long hypothetical transcript... 92 4e-18
gb|AAF25541.1|AF109218_1 (AF109218) TenA [Staphylococcus ca... 89 4e-17
emb|CAB74276.1| (AL139075) putative transcriptional regulat... 69 3e-11
emb|CAA21803| (AL032684) putative thiamine biosynthesis pro... 68 9e-11
ref|NP_015065.1|THI21| Thi21p >gi|2132251|pir||S65289 hypot... 61 9e-09
dbj|BAA21049| (D45894) thiamine-4 [Neurospora crassa] 57 1e-07
ref|NP_014586.1|THI20| Thi20p >gi|2133057|pir||S66740 proba... 56 3e-07
ref|NP_015446.1|THI22| Thi22p >gi|2132289|pir||S69014 hypot... 50 1e-05
emb|CAB50004.1| (AJ248286) TRANSCRIPTIONAL REGULATOR [Pyroc... 48 5e-05
emb|CAA62531| (X91067) transcription factor [Saccharomyces ... 48 5e-05
sp|P25052|TENA_BACSU TRANSCRIPTIONAL ACTIVATOR TENA >gi|73039|pir||XMBSTA
transcriptional activator tenA - Bacillus subtilis
>gi|143729 (M73546) transcription activator [Bacillus
subtilis] >gi|2633519|emb|CAB13022| (Z99110)
transcriptional regulator [Bacillus subtilis]
Length = 236
Score = 164 bits (411), Expect = 6e-40
Identities = 82/218 (37%), Positives = 124/218 (56%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
M F+E R ++ +WE SF HPF+QG+ G L + F+YY+LQD YYL HF+K+ A
Sbjct: 1 MKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAA 60
Query: 61 KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL 120
+ + +A+ E+ + F + LEI E+E +PTAY Y SHMYR +
Sbjct: 61 YAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSV 120
Query: 121 IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWIETYASEEATVQIAKECDIIN 180
+ G+ +A +LPC WLY+E+G +L+ +P+YQKWI TY + Q+ ++ + +
Sbjct: 121 LSGNFAEILAALLPCYWLYYEVGEKLLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFD 180
Query: 181 RLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW 218
L + S E+ + +M E F+ISS E FW MA E W
Sbjct: 181 ELAENSTEEVRAKMKENFVISSYYEYQFWGMAYRKEGW 218
gi|4155800 (AE001546) putative TRANSCRIPTIONAL REGULATOR [Helicobacter pylori
J99]
Length = 217
Score = 109 bits (270), Expect = 2e-23
Identities = 58/216 (26%), Positives = 107/216 (48%), Gaps = 6/216 (2%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
M ++ + + W HPF+QG+ G L + FR+Y++QD +L ++K++ L
Sbjct: 1 MQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVV 60
Query: 61 KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL 120
K+ E + +++ N E+ + + +EL+I ++E+ Y S+M +
Sbjct: 61 KACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG 120
Query: 121 IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPL----YQKWIETYASEEATVQIAKEC 176
GS+ +L C W Y I L ++ PN L Y WI+ Y+S+E +
Sbjct: 121 FKGSIKEVAVAVLACGWSYLVIAQNLSQI--PNALEDAFYGHWIKGYSSKEFQACVTWNI 178
Query: 177 DIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMA 212
++++ L S +QE E++ E F+ +S+ E FW+MA
Sbjct: 179 NLLDSLALASSKQEIEKLKEIFIATSEYEYQFWDMA 214
gb|AAD08332.1| (AE000633) transcriptional regulator (tenA) [Helicobacter pylori
26695]
Length = 217
Score = 104 bits (257), Expect = 7e-22
Identities = 56/202 (27%), Positives = 102/202 (49%), Gaps = 6/202 (2%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSASEEIQAHLRLN 74
W HPF+QG+ G L + FR+Y++QD +L ++K++ L K+ E +
Sbjct: 15 WGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVVKACDEAVMREFSNA 74
Query: 75 AEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIAGMLP 134
+++ N E+ + + + L+I ++E+ Y S+M + GS+ A +L
Sbjct: 75 IQDILNNEMSIHNHYIRGLQITQKELQNARPTLANKSYTSYMLAEGFKGSIKEVAAAVLS 134
Query: 135 CAWLYHEIGLRLIEVGSPNPL----YQKWIETYASEEATVQIAKECDIINRLYQESDEQE 190
C W Y I L ++ PN L Y WI+ Y+S+E + ++++ L S +QE
Sbjct: 135 CGWSYLVIAQNLSQI--PNALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLTSSKQE 192
Query: 191 QEQMLEAFLISSKMEADFWEMA 212
E++ + F+ +S+ E FW+MA
Sbjct: 193 IEKLKDIFITTSEYEYLFWDMA 214
emb|CAB50005.1| (AJ248286) hypothetical protein [Pyrococcus abyssi]
Length = 214
Score = 101 bits (248), Expect = 7e-21
Identities = 66/213 (30%), Positives = 103/213 (47%), Gaps = 8/213 (3%)
Query: 2 LFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKK 61
+ TE R + W + FEHPF+ L SG L E F++Y+LQD YL ++ +IA K
Sbjct: 1 MITERLRRDADHIWRKIFEHPFVVQLYSGNLPMEKFKFYVLQDFNYLVGLTRALAVIASK 60
Query: 62 SASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLI 121
+ + + L EE+ E+ E KEL + ++ ++T Y+ M
Sbjct: 61 ADYPLLAELIELAREEITT-EMKNYEELLKELGLTLEDAIKTEPTLVNSAYMDFMLSTAY 119
Query: 122 DGSVNSAIAGMLPCAWLYHEIGLRLIEV--GSPNPLYQKWIETYASEEATVQIAKECDII 179
G V + +LPC W Y EI + G+P +Y++W Y SEE +++ +II
Sbjct: 120 KGRVVEGLTALLPCFWSYAEIAEYHKDKLDGNPVEIYREWGRVYLSEEYLSLVSRLREII 179
Query: 180 NRLYQESDEQEQEQMLEAFLISSKMEADFWEMA 212
+ L + E++ E F+ SK E FWEMA
Sbjct: 180 DSL-----GGDYERLREIFITGSKFELAFWEMA 207
dbj|BAA79642.1| (AP000060) 228aa long hypothetical transcriptional activator TENA
[Aeropyrum pernix]
Length = 228
Score = 96.7 bits (237), Expect = 1e-19
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 5/220 (2%)
Query: 2 LFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKK 61
L ++ + + W HPF++ L SG L + FR+Y +QD YL + + A K
Sbjct: 9 LLSDRLKRDNMDLWSLLPSHPFVKALYSGSLPLDKFRFYAVQDYNYLVGLVRSLSIAASK 68
Query: 62 SASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLI 121
S S E+ +A L + E+ E EL + E+L APT YV+ M
Sbjct: 69 SWSFEVARLALSHASFLASTEMANYERLLGELGLSLSEVLREEPAPTNEAYVNFMIATCS 128
Query: 122 DGSVNSAIAGMLPCAWLYHEIGL---RLIEVGSPNPLYQKWIETYASEEATVQIAKECDI 178
G+ + +LPC W Y EI + RL+ S + LY++W Y S E + +
Sbjct: 129 TGTALECMVSLLPCYWSYREIAIANERLLRENSVD-LYRRWASVYLSSEYGEAVEEYRRA 187
Query: 179 INRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW 218
++RL+ E + ++ F +++ E FW+MA +EKW
Sbjct: 188 VDRLWAE-EGGVYSRLKRIFRKATRYEYMFWDMAWRMEKW 226
sp|P44659|Y358_HAEIN HYPOTHETICAL PROTEIN HI0358 >gi|1075360|pir||D64063 transcription
activator (tenA) homolog - Haemophilus influenzae
(strain Rd KW20) >gi|1573326 (U32720) transcriptional
activator, putative [Haemophilus influenzae Rd]
Length = 215
Score = 96.3 bits (236), Expect = 2e-19
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 9 EKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSASEEIQ 68
+++ +W++ EH F+Q L G L F++YL QD YL H+S+ + L K+ +
Sbjct: 7 QQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEM 66
Query: 69 AHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSA 128
R E L EI + + +E I EQEI T + Y ++ + GS+
Sbjct: 67 ETPRKTLEILCQ-EIQLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTGSLAEL 125
Query: 129 IAGMLPCAWLYHEIGLRLIE--VGSPNPLYQKWIETYASEEATVQIAKECDIINRLYQES 186
A + PCA Y ++ + + PN YQ WI+TYASEE + D + L +
Sbjct: 126 YAAVTPCALGYAQVARYITQHYPRLPNNPYQTWIDTYASEEFQQAAQETVDFLTALCKPL 185
Query: 187 DEQEQEQMLEAFLISSKMEADFWEMALVL 215
+ + ++ + F +++ME FW+M L L
Sbjct: 186 NPSQLAEIQQIFTTATRMEIAFWQMGLDL 214
dbj|BAA30261| (AP000005) 218aa long hypothetical transcriptional regulator
[Pyrococcus horikoshii]
Length = 218
Score = 92.1 bits (225), Expect = 4e-18
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
++ T+ R S W++ FEHPF+ L SG L E F++Y+LQD YL ++ +I+
Sbjct: 3 VMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISS 62
Query: 61 KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL 120
K A + A L A + E+ KEL++ ++ ++T Y+ M
Sbjct: 63 K-AEYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA 121
Query: 121 IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNP--LYQKWIETYASEEATVQIAKECDI 178
G++ + +LPC W Y EI + NP +Y++W + Y S E + +
Sbjct: 122 YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDNPIKIYREWGKVYLSNEYLNLVGR---- 177
Query: 179 INRLYQESDEQEQEQMLEAFLISSKMEADFWEMA 212
+ ++ S +++ F+ SK E FWEMA
Sbjct: 178 LRKIIDSSGHSGYDRLRRIFITGSKFELAFWEMA 211
gb|AAF25541.1|AF109218_1 (AF109218) TenA [Staphylococcus carnosus]
Length = 228
Score = 88.5 bits (216), Expect = 4e-17
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
M F E + + ++ FIQ L+ G++ E R YL D YL F+ +Y L+
Sbjct: 1 MNFAETLERDAQPIIDEIYQDHFIQELLKGDIKKEALRQYLRADASYLREFANIYALLIP 60
Query: 61 KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPV-APTAYHYVSHMYRQ 119
E L + + NGE+ E + EI++ V P+ HY+ HMY
Sbjct: 61 IMPDLESVRFLVDQIQFIVNGEVEAHEYMADYIGENYNEIVQKKVWPPSGDHYIKHMYYN 120
Query: 120 L-IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPN--PLYQKWIETYASE-EATVQIAKE 175
+ + AIA M PC ++Y I R ++ + N + KW E Y +E + +++
Sbjct: 121 VYAHENAAYAIAAMAPCPYVYAMIAKRAMKDPNLNKSSILAKWFEFYNTEMDPLIEVLD- 179
Query: 176 CDIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW 218
D++N+L E E+ ++ E +L S+ E +F+ MA EKW
Sbjct: 180 -DLMNQLTANMSETEKNEVRENYLQSTVHELNFFNMAYTSEKW 221
emb|CAB74276.1| (AL139075) putative transcriptional regulator [Campylobacter
jejuni]
Length = 222
Score = 69.1 bits (166), Expect = 3e-11
Identities = 57/227 (25%), Positives = 100/227 (43%), Gaps = 20/227 (8%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
MLF+ L +E I W H F++ L L E F +YL QD YL +++K Y +A
Sbjct: 2 MLFSNLIKENQKI-WNAYLHHDFVKKLEDKSLKQENFLFYLKQDYIYLLNYAKCYARLAL 60
Query: 61 KS-ASEEIQAHLRLNAEELKNGEIFVREGFFK------ELEIGEQEILETPVAPTAYHYV 113
S ++E++ ++ + GE+ + EL+I ++ ++ Y
Sbjct: 61 NSNTAKELRFAMKFQ-NYIVEGEMELHRAILSLGINADELDIKDESLVNIA-------YS 112
Query: 114 SHMYRQLIDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPL----YQKWIETYASEEAT 169
+M +G + + CA Y +IG +I L Y++WI TY SE
Sbjct: 113 RYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYKEWILTYGSENFQ 172
Query: 170 VQIAKECDIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLE 216
+ + D +N Q+ +++ E F +++E FWE +L +E
Sbjct: 173 NEAKEFEDFVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFWEHSLRME 219
emb|CAA21803| (AL032684) putative thiamine biosynthesis protein
[Schizosaccharomyces pombe]
Length = 551
Score = 67.5 bits (162), Expect = 9e-11
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIA-KKSASEEIQAHLRL 73
W+ H F L G L F+ YL QD YL +F++ Y L K++ I +
Sbjct: 337 WKEYINHKFTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQS 396
Query: 74 NAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIAGM- 132
++ E+ V + + + + E A TAY R ++D +A +
Sbjct: 397 VIHVIEEKELHVSMCSSYGVSLQDLKSCEESPACTAYS------RYILDTGAAQDVAALD 450
Query: 133 ---LPCAWLYHEIGLRLIEVGSPNPL--YQKWIETYASEEATVQIAKECDIINRLYQESD 187
PC Y+ I RL++ NP YQKW++ Y E+ + + C I + +
Sbjct: 451 FVQAPCLIGYYVIAARLMKEPFRNPQGPYQKWVDNYFCEDYLSAVRRGCRQIEEIVLKLS 510
Query: 188 EQEQEQMLEAFLISSKMEADFWE 210
+ ++++E F+ ++K E FWE
Sbjct: 511 PERIQELIEIFIRATKFETLFWE 533
ref|NP_015065.1|THI21| Thi21p >gi|2132251|pir||S65289 hypothetical protein YPL258c - yeast
(Saccharomyces cerevisiae) >gi|1370532|emb|CAA97986|
(Z73614) ORF YPL258c [Saccharomyces cerevisiae]
Length = 551
Score = 60.9 bits (145), Expect = 9e-09
Identities = 48/209 (22%), Positives = 99/209 (46%), Gaps = 11/209 (5%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKS-ASEEIQAHLRL 73
W+ H F++ + G L P+ F++++ QD YL +++++ + KS E+++ L +
Sbjct: 347 WDSYVNHDFVRKVADGSLEPKKFQFFIEQDYLYLVNYARISCIAGSKSPCLEDLEKELVI 406
Query: 74 NAEELKNG----EIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAI 129
E ++NG E +RE F + Q+I P Y + + R+ G+ +
Sbjct: 407 -VECVRNGLCQHERRLREEFGIKDPDYLQKIQRGPALRAYCRYFNDVSRR---GNWQELV 462
Query: 130 AGMLPCAWLY-HEIGLRLIEV-GSPNPLYQKWIETYASEEATVQIAKECDIINRLYQESD 187
+ PC Y H + EV + +Y++W ETY+S + + ++N + +
Sbjct: 463 IALNPCLMGYVHALTKIKDEVTAAEGSVYREWCETYSSSWCHEAMLEGEKLLNHILETYP 522
Query: 188 EQEQEQMLEAFLISSKMEADFWEMALVLE 216
++ + ++ + ++EA+FW AL E
Sbjct: 523 PEKLDTLVTIYAEVCELEANFWTAALEYE 551
dbj|BAA21049| (D45894) thiamine-4 [Neurospora crassa]
Length = 500
Score = 57.0 bits (135), Expect = 1e-07
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 6 LAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSAS- 64
L R + W+R HPF+ + G L E F+ YL+QD YL H+++ L + K+ +
Sbjct: 319 LERPDVAPVWDRYIHHPFVMAMGDGTLPRESFKGYLMQDYVYLIHYARANALASYKAKNI 378
Query: 65 EEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAY-HYVSHMYRQLIDG 123
E++ + A + + V+ + + E E A TAY YV + +
Sbjct: 379 EDVAGSAAIVANCFREMNLHVQYCAGFGISKEQMEKTEEHQACTAYTRYVLDIGQSEDWF 438
Query: 124 SVNSAIAGMLPCAWLYHEIGLRLIEVGSPNP-------LYQKWIETYASEEATVQIAKEC 176
++ A+A PC Y I L SPN LY WI Y +++ T + C
Sbjct: 439 ALQMALA---PCLLGYGAIAKHL--HASPNSKANETDNLYWTWITNYVADDYTTAVKAGC 493
Query: 177 DIINR 181
+++ R
Sbjct: 494 ELLER 498
ref|NP_014586.1|THI20| Thi20p >gi|2133057|pir||S66740 probable transcription factor
YOL055c - yeast (Saccharomyces cerevisiae)
>gi|1419865|emb|CAA99063| (Z74797) ORF YOL055c
[Saccharomyces cerevisiae]
Length = 551
Score = 55.8 bits (132), Expect = 3e-07
Identities = 44/208 (21%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKS-ASEEIQAHLRL 73
W+ H F++ + G L + F++++ QD YL +++++ + K+ E+++ L +
Sbjct: 347 WDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVI 406
Query: 74 NA---EELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIA 130
E+ E ++E F + Q+I P Y + + R+ G+ +A
Sbjct: 407 VGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRR---GNWQELVA 463
Query: 131 GMLPCAWLYHEIGLRLI-EVGSP-NPLYQKWIETYASEEATVQIAKECDIINRLYQESDE 188
+ PC Y E ++ +V +P +Y +W ETYAS + + ++N + +
Sbjct: 464 SLTPCLMGYGEALTKMKGKVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPP 523
Query: 189 QEQEQMLEAFLISSKMEADFWEMALVLE 216
++ + ++ + ++E +FW AL E
Sbjct: 524 EQLDTLVTIYAEVCELETNFWTAALEYE 551
ref|NP_015446.1|THI22| Thi22p >gi|2132289|pir||S69014 hypothetical protein YPR121w - yeast
(Saccharomyces cerevisiae) >gi|1066472 (U40828) Weak
similarity to hypothetical protein 3 (A. thaliana, PIR
accession number S23315) [Saccharomyces cerevisiae]
Length = 572
Score = 50.4 bits (118), Expect = 1e-05
Identities = 41/208 (19%), Positives = 90/208 (42%), Gaps = 9/208 (4%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSAS-EEIQAHLRL 73
W+ H F++ + G L + F++++ QD YL + ++ + KS + E+++ L +
Sbjct: 368 WDAYVNHEFVKRVADGTLERKKFQFFIEQDYLYLIDYVRVCCVTGSKSPTLEDLEKDLVI 427
Query: 74 ---NAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIA 130
EL E +RE F + Q+I P Y+ + R+ G+ +
Sbjct: 428 ADCARNELNEHERRLREEFGVKDPDYLQKIKRGPALRAYCRYLIDISRR---GNWQEIVV 484
Query: 131 GMLPC--AWLYHEIGLRLIEVGSPNPLYQKWIETYASEEATVQIAKECDIINRLYQESDE 188
+ PC ++Y ++ + +Y +W +T AS + + ++N + +
Sbjct: 485 ALNPCLMGYVYAVDKVKDKITAAEGSIYSEWCDTCASSFCYQAVLEGERLMNHILETYPP 544
Query: 189 QEQEQMLEAFLISSKMEADFWEMALVLE 216
+ + ++ F ++E +FW A+ E
Sbjct: 545 DQLDSLVTIFARGCELETNFWTAAMEYE 572
emb|CAB50004.1| (AJ248286) TRANSCRIPTIONAL REGULATOR [Pyrococcus abyssi]
Length = 224
Score = 48.4 bits (113), Expect = 5e-05
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 7/212 (3%)
Query: 1 MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK 60
M EL RE I W++ H F++ + G+++ E F +L+ D Y++++ + ++
Sbjct: 3 MFSEELLREARPI-WKKFLPHRFLKEVAEGKISKEAFARWLVNDYYFVKNALRFMAILMA 61
Query: 61 KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL 120
K+ L AE + I FKE LE + A YV+++
Sbjct: 62 KAPDN----LLGFFAESIY--YISQELTMFKENAEKLGVELEGEIDWRAKAYVNYLLNTA 115
Query: 121 IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWIETYASEEATVQIAKECDIIN 180
GS Y+E + E Y +I ++SE+ + + +I+N
Sbjct: 116 YAGSFLEGFTAFYCEERAYYEAWKWVKENLKEKSPYIDFINHWSSEDFRKYVERIEEILN 175
Query: 181 RLYQESDEQEQEQMLEAFLISSKMEADFWEMA 212
L + + E+E+ + FL S+ E FW++A
Sbjct: 176 SLAEMHGDFEKERAKKVFLEVSEFELLFWDIA 207
emb|CAA62531| (X91067) transcription factor [Saccharomyces cerevisiae]
Length = 543
Score = 48.4 bits (113), Expect = 5e-05
Identities = 40/200 (20%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 15 WERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKS-ASEEIQAHLRL 73
W+ H F++ + G L + F++++ QD YL +++++ + K+ E+++ L +
Sbjct: 347 WDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVI 406
Query: 74 NA---EELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIA 130
E+ E ++E F + Q+I P Y + + R+ G+ +A
Sbjct: 407 VGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRR---GNWQELVA 463
Query: 131 GMLPCAWLYHEIGLRLI-EVGSP-NPLYQKWIETYASEEATVQIAKECDIINRLYQESDE 188
+ PC Y E ++ +V +P +Y +W ETYAS + + ++N + +
Sbjct: 464 SLTPCLMGYGEALTKMKGKVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPP 523
Query: 189 QEQEQMLEAFLISSKMEADF 208
++ + ++ + ++E +F
Sbjct: 524 EQLDTLVTIYAEVCELETNF 543
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.136 0.400
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59633489
Number of Sequences: 457798
Number of extensions: 2473905
Number of successful extensions: 6435
Number of sequences better than 1.0e-02: 16
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6405
Number of HSP's gapped (non-prelim): 16
length of query: 218
length of database: 140,871,481
effective HSP length: 54
effective length of query: 164
effective length of database: 116,150,389
effective search space: 19048663796
effective search space used: 19048663796
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 94 (41.0 bits)