BLASTP 2.0.11 [Jan-20-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pi310 (1421 kb reverse) BIO14.03
         (57 letters)

           457,798 sequences; 140,871,481 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|2444123  (U88974) ORF44 [Streptococcus thermophilus tempe...    96  3e-20

 gi|2444123 (U88974) ORF44 [Streptococcus thermophilus temperate
          bacteriophage O1205] >gi|3540288 (AF057033) gp57
          [Streptococcus thermophilus bacteriophage sfi11]
          Length = 57
          
 Score = 96.0 bits (235), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 52/55 (94%)

Query: 1  MKSTFYANIELGGEITQVSFEAASASDVIEQIWRTYGISTPIIEIWAEVTNDDSS 55
          MK+ FYAN+ELGGEITQVSF+A S SDVIEQIWRTYGISTPIIEIWAE++++D++
Sbjct: 1  MKNKFYANVELGGEITQVSFQATSPSDVIEQIWRTYGISTPIIEIWAELSDEDNN 55



    Posted date:  Mar 2, 2000 12:24 PM
  Number of letters in database: 140,871,481
  Number of sequences in database:  457,798
  
Lambda     K      H
   0.311    0.127    0.357 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14722764
Number of Sequences: 457798
Number of extensions: 364920
Number of successful extensions: 702
Number of sequences better than 1.0e-02: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 1
length of query: 57
length of database: 140,871,481
effective HSP length: 36
effective length of query: 21
effective length of database: 124,390,753
effective search space: 2612205813
effective search space used: 2612205813
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.8 bits)
S2: 87 (38.3 bits)