BLASTP 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pi235 (1058 kb forward) BIO14.03
(93 letters)
457,798 sequences; 140,871,481 total letters
Searching..................................................done
***** No hits found ******
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.141 0.381
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23672746
Number of Sequences: 457798
Number of extensions: 819931
Number of successful extensions: 1563
Number of sequences better than 1.0e-02: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1563
Number of HSP's gapped (non-prelim): 0
length of query: 93
length of database: 140,871,481
effective HSP length: 53
effective length of query: 40
effective length of database: 116,608,187
effective search space: 4664327480
effective search space used: 4664327480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 89 (39.1 bits)