BLASTP 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pi142 (471 kb forward) BIO14.03
(201 letters)
457,798 sequences; 140,871,481 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|2459825 (AF001793) small major structural protein [Strep... 160 7e-39
gb|AAC39293.1| (AF115102) orf203 gp [Streptococcus thermoph... 157 5e-38
gb|AAC39279.1| (AF115103) orf202 gp [Streptococcus thermoph... 155 2e-37
gb|AAD21889.1| (AF085222) major tail protein [Streptococcus... 152 3e-36
pir||JC2574 hypothetical 22K protein - Leuconostoc oenos ph... 114 7e-25
gi|2459825 (AF001793) small major structural protein [Streptococcus phage
phi7201]
Length = 203
Score = 160 bits (401), Expect = 7e-39
Identities = 90/195 (46%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Query: 1 MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLXXXXXXXXXXXXXXTQKFG 60
M IVGLK L L+D KT +II G EGL+TDG+ + K L T+ G
Sbjct: 1 MAIVGLKLVKLALVDPKTQQIIKGEEGLSTDGVIEIDSKMLGTRTANISNLEGQATKVPG 60
Query: 61 DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI 120
+N + DV+ P VA +NNL FDIK KI G SDKKGGYV + P VA++IES+ +
Sbjct: 61 NNTVQDVMIGPGSPTVAFEFNNLDFDIKQKILGFKSDKKGGYVYQGEKPHVAVLIESQTL 120
Query: 121 DRSHSIFYAFGNGHMTETALNIQTD-NAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADS 179
DR +S+F+ F NG E+A N+ TD + AQ R +D LTY +L+ A+ N+ +K + SA S
Sbjct: 121 DRKNSVFFGFANGIFQESAQNVGTDTDTAQTRQDDHLTYNALSAIAFGNEPIKKYYSAAS 180
Query: 180 GFDKTAMLKEVMGGY 194
GFD M KEV GGY
Sbjct: 181 GFDSANMHKEVFGGY 195
gb|AAC39293.1| (AF115102) orf203 gp [Streptococcus thermophilus bacteriophage
Sfi19]
Length = 203
Score = 157 bits (394), Expect = 5e-38
Identities = 88/195 (45%), Positives = 117/195 (59%), Gaps = 1/195 (0%)
Query: 1 MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLXXXXXXXXXXXXXXTQKFG 60
M IVGLK L L+D KT +II G EGL+TDG+ + K L T+ G
Sbjct: 1 MAIVGLKMVKLALVDPKTQQIIKGEEGLSTDGVIEIDSKMLGTRTANISNLEGQATKVPG 60
Query: 61 DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI 120
+N + DV+ P VA +NNL FDIK KI G SD KGGYV + P VA++IES+ +
Sbjct: 61 NNTVQDVMIGPGSPTVAFEFNNLDFDIKQKILGFKSDGKGGYVYQGEKPHVAVLIESQTL 120
Query: 121 DRSHSIFYAFGNGHMTETALNIQTD-NAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADS 179
DR +S+++ F NG E+A N+ TD + AQ R +D LTY +L+ A+ N+ +K + SA S
Sbjct: 121 DRKNSVYFGFANGIFQESAQNVGTDTDTAQTRQDDHLTYNALSATAFGNEPIKKYYSAAS 180
Query: 180 GFDKTAMLKEVMGGY 194
GFD M KEV GGY
Sbjct: 181 GFDSANMHKEVFGGY 195
gb|AAC39279.1| (AF115103) orf202 gp [Streptococcus thermophilus bacteriophage
Sfi21]
Length = 202
Score = 155 bits (388), Expect = 2e-37
Identities = 85/199 (42%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 1 MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLXXXXXXXXXXXXXXTQKFG 60
M IVGLK L L+D T ++I G GL+TDG+ + K L T+ G
Sbjct: 1 MAIVGLKMVKLALVDPDTQQLIKGDSGLSTDGVIAIDSKMLGTRTANISNLEGQATKIPG 60
Query: 61 DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI 120
+N + V+ + P VA +NNL F IK KI G D KGGYV+ D P VA++IESE +
Sbjct: 61 NNSVQGVIIAPGSPTVAFDFNNLDFVIKQKILGYKGDGKGGYVKQDDKPHVAVLIESETL 120
Query: 121 DRSHSIFYAFGNGHMTETALNIQTD-NAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADS 179
DR +S+F+ F NG M E N+ TD + AQ R +D +TY +L+ A+NN+ K + + DS
Sbjct: 121 DRKNSVFFGFANGIMQEPTQNVATDTDTAQTRQDDHVTYNALSAIAFNNEPFKKYYTGDS 180
Query: 180 GFDKTAMLKEVMGGYAASG 198
FDK M KEV GGY +G
Sbjct: 181 AFDKVNMYKEVFGGYVLAG 199
gb|AAD21889.1| (AF085222) major tail protein [Streptococcus thermophilus
bacteriophage DT1]
Length = 203
Score = 152 bits (379), Expect = 3e-36
Identities = 85/195 (43%), Positives = 114/195 (57%), Gaps = 1/195 (0%)
Query: 1 MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLXXXXXXXXXXXXXXTQKFG 60
M IVGLK L L+D KT +II G EGL+TDG+ + K L T+ G
Sbjct: 1 MAIVGLKLVKLALVDPKTQQIIKGVEGLSTDGVIEIDSKMLGTRTANISNLEGQATKVPG 60
Query: 61 DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI 120
+N + DV+ P VA +NNL FDIK KI G SDKKGGYV + P VA++IES+ +
Sbjct: 61 NNEVQDVMIGPGSPTVAFEFNNLDFDIKQKILGFKSDKKGGYVYQGEKPHVAVLIESQTL 120
Query: 121 DRSHSIFYAFGNGHMTETALNIQTD-NAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADS 179
DR +S+++ F NG E+ N+ TD + AQ R D LTY +L+ A+ + +K + + S
Sbjct: 121 DRKNSVYFGFANGIFQESTQNVATDTDTAQTRQNDHLTYNALSAIAFGGEPIKKYFTGSS 180
Query: 180 GFDKTAMLKEVMGGY 194
FDK M KEV GGY
Sbjct: 181 TFDKANMYKEVFGGY 195
pir||JC2574 hypothetical 22K protein - Leuconostoc oenos phage L10 >gi|806614
(L13035) ORFE [Bacteriophage L10]
Length = 206
Score = 114 bits (282), Expect = 7e-25
Identities = 59/197 (29%), Positives = 99/197 (49%), Gaps = 1/197 (0%)
Query: 1 MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLXXXXXXXXXXXXXXTQKFG 60
M G+K+ L L+ + GL+ G+Y + T+ +G
Sbjct: 1 MATFGIKQVQLALLGSDGNIVKDATTGLSATGIYATGTGSFTTKTANITGLEAAFTKVYG 60
Query: 61 DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI 120
DN + D+ ++ VA +N+LP D+ AK G++SD KGGY Q D P+++L+I++ +
Sbjct: 61 DNKVSDLQETRGDTSVALDFNSLPHDVVAKALGKISDGKGGYYQG-DKPKLSLLIQTTAL 119
Query: 121 DRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADSG 180
S +++ F G + T + T+ Q R +D+ TY L + WN+Q +K F S ++G
Sbjct: 120 GESGYVYFGFRQGELIVTEASNGTNTTTQTRADDSFTYTPLDIDDWNDQPLKMFYSNETG 179
Query: 181 FDKTAMLKEVMGGYAAS 197
F ML +V GY A+
Sbjct: 180 FSNDVMLADVFPGYTAA 196
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.314 0.133 0.375
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52077856
Number of Sequences: 457798
Number of extensions: 1872139
Number of successful extensions: 2778
Number of sequences better than 1.0e-02: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2768
Number of HSP's gapped (non-prelim): 5
length of query: 201
length of database: 140,871,481
effective HSP length: 57
effective length of query: 144
effective length of database: 114,776,995
effective search space: 16527887280
effective search space used: 16527887280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 93 (40.6 bits)