Score E
Sequences producing significant alignments: (bits) Value
gi|4193356 (AF055088) ATP-binding cassette; PsaB [Streptoco... 298 4e-80
sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 284 5e-76
pir||S61910 hypothetical protein 5 - Streptococcus parasang... 276 1e-73
gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein Mts... 271 5e-72
gi|3790618 (AF097414) EfmC [Enterococcus faecium] 240 1e-62
gi|2293152 (AF008220) putative transporter [Bacillus subtil... 211 4e-54
gi|1777934 (U55214) TroB [Treponema pallidum] >gi|3322432 (... 205 2e-52
gi|1335913 (U52850) unknown [Erysipelothrix rhusiopathiae] 203 2e-51
emb|CAA67569| (X99127) ATP binding protein [Staphylococcus ... 191 4e-48
sp|P48334|YCXD_CYAPA PROBABLE ABC TRANSPORTER ATP-BINDING P... 186 1e-46
gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chla... 179 2e-44
gb|AAC67659.1| (AE001281) rRNA methylase [Chlamydia trachom... 179 2e-44
sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING... 179 2e-44
gb|AAD18492| (AE001619) rRNA methylase [Chlamydia pneumoniae] 176 2e-43
gi|1245465 (U50597) YfeB [Yersinia pestis] 167 1e-40
sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BIND... 165 4e-40
gb|AAD41066.1|AF128999_2 (AF128999) SitB [Salmonella typhim... 163 1e-39
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [S... 159 3e-38
gb|AAD37835.1|AF104349_1 (AF104349) ABC transporter ZurA [L... 150 1e-35
gi|2648557 (AE000966) ABC transporter, ATP-binding protein ... 148 3e-35
gi|2621685 (AE000842) ABC transporter [Methanobacterium the... 143 2e-33
gb|AAD35218.1|AE001698_7 (AE001698) zinc ABC transporter, A... 141 7e-33
gb|AAF11830.1|AE002060_9 (AE002060) manganese ABC transport... 138 3e-32
dbj|BAA17111| (D90903) ABC transporter [Synechocystis sp.] 132 3e-30
dbj|BAA09014| (D50453) homologue of iron dicitrate transpor... 131 4e-30
dbj|BAA22247| (AB000617) YcdI [Bacillus subtilis] >gi|26325... 131 6e-30
gb|AAD33527.1|AF132117_4 (AF132117) FhuA [Staphylococcus au... 130 1e-29
emb|CAB72626.1| (AL139074) ABC transporter ATP-binding prot... 129 2e-29
emb|CAB73781.1| (AL139078) enterochelin uptake ATP-binding ... 129 3e-29
sp|P15031|FECE_ECOLI IRON(III) DICITRATE TRANSPORT ATP-BIND... 128 5e-29
gi|2983231 (AE000698) ABC transporter [Aquifex aeolicus] 125 4e-28
emb|CAA06499| (AJ005352) ATP binding protein [Staphylococcu... 123 1e-27
dbj|BAA30335| (AP000005) 250aa long hypothetical ferrichrom... 123 2e-27
sp|P44692|ZNUC_HAEIN HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-B... 122 2e-27
emb|CAB73604.1| (AL139079) putative haemin uptake system AT... 121 5e-27
emb|CAA96186| (Z71552) AdcC protein [Streptococcus pneumoniae] 118 3e-26
sp|P52648|ZNUC_ECOLI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-B... 118 3e-26
gb|AAD18682| (AE001639) ABC Transporter ATPase [Chlamydia p... 118 4e-26
dbj|BAA30765| (AP000006) 260aa long hypothetical ABC transp... 118 6e-26
dbj|BAA29884| (AP000003) 241aa long hypothetical iron (III)... 117 1e-25
sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 117 1e-25
emb|CAB49438.1| (AJ248284) ABC TRANSPORTER ATP-BINDING PROT... 116 2e-25
gb|AAC68013.1| (AE001315) ABC Transporter ATPase [Chlamydia... 116 2e-25
gb|AAF12553.1|AE001826_22 (AE001826) iron ABC transporter, ... 115 3e-25
emb|CAB50179.1| (AJ248287) iron (III) ABC transporter, ATP-... 115 3e-25
gi|2622836 (AE000928) cobalt transport ATP-binding protein ... 115 5e-25
pir||G64435 cobalt transport ATP-binding protein O homolog ... 114 6e-25
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC trans... 114 8e-25
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 113 1e-24
sp|P49938|FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROT... 113 1e-24
sp|Q47087|CBRD_ERWCH ACHROMOBACTIN TRANSPORT ATP-BINDING PR... 113 1e-24
emb|CAB56736.1| (AL121600) ABC transport protein, ATP-bindi... 113 2e-24
gi|2650201 (AE001075) iron (III) ABC transporter, ATP-bindi... 113 2e-24
emb|CAB49920.1| (AJ248286) iron (III) ABC transporter, ATP-... 112 3e-24
gi|2649168 (AE001007) iron (III) ABC transporter, ATP-bindi... 112 3e-24
dbj|BAA22320| (D86417) YfmF [Bacillus subtilis] >gi|2633073... 112 3e-24
gb|AAD35172.1|AE001694_8 (AE001694) iron(III) ABC transport... 111 6e-24
dbj|BAA16592| (D90899) iron(III) dicitrate transport system... 111 6e-24
gb|AAD53128.1|AF176902_3 (AF176902) IRP1D [Corynebacterium ... 111 7e-24
gb|AAD48883.1| (U52150) ATPase [Vibrio cholerae] 109 2e-23
dbj|BAA79499.1| (AP000059) 264aa long hypothetical ABC tran... 109 2e-23
gi|2983089 (AE000689) ABC transporter [Aquifex aeolicus] 109 2e-23
emb|CAB69727.1| (AL137166) putative metal transport ABC tra... 109 3e-23
dbj|BAA29201.1| (AP000001) 260aa long hypothetical transpor... 108 5e-23
emb|CAB49694.1| (AJ248285) hypothetical protein [Pyrococcus... 107 8e-23
gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium d... 107 1e-22
emb|CAB15306| (Z99120) similar to iron transport system [Ba... 107 1e-22
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BIND... 107 1e-22
gi|1778504 (U82598) ferric enterobactin transport ATP-bindi... 107 1e-22
emb|CAB53325.1| (AL109974) putative iron-siderophore ABC-tr... 106 1e-22
dbj|BAA80377.1| (AP000061) 316aa long hypothetical transpor... 106 1e-22
pir||S16298 ferric enterobactin transport protein fepC - Es... 106 1e-22
gb|AAF30474.1|AE002106_8 (AE002106) iron(III) dicitrate tra... 106 2e-22
emb|CAB49911.1| (AJ248286) DAUNORUBICIN RESISTANCE ATP-BIND... 106 2e-22
emb|CAB38595.1| (AL035654) putative ABC transporter ATP-bin... 106 2e-22
gi|2622603 (AE000909) ABC transporter (ATP-binding [Methano... 106 2e-22
gi|2621173 (AE000802) cobalt transport ATP-binding protein ... 105 3e-22
gi|1176399 (U77778) putative ABC transporter subunit [Staph... 105 3e-22
bbs|153692 (S72674) HitC=iron utilization protein [Haemophi... 105 3e-22
emb|CAB72946.1| (AL139076) ABC-transporter ATP-binding prot... 104 6e-22
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agro... 104 6e-22
gi|2649585 (AE001034) ABC transporter, ATP-binding protein ... 104 6e-22
gi|1573050 (U32695) iron(III) ABC transporter, ATP-binding ... 104 6e-22
sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEI... 104 6e-22
sp|P07821|FHUC_ECOLI FERRICHROME TRANSPORT ATP-BINDING PROT... 104 7e-22
gi|2650236 (AE001077) ABC transporter, ATP-binding protein ... 104 9e-22
gi|2649880 (AE001054) cobalt transport ATP-binding protein ... 104 9e-22
pir||S60887 ferric exochelin uptake protein FxuB - Mycobact... 104 9e-22
gi|2649451 (AE001025) ABC transporter, ATP-binding protein ... 103 2e-21
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA... 103 2e-21
emb|CAA29254| (X05810) fhuC product (AA 1-265) [Escherichia... 103 2e-21
emb|CAA07722| (AJ007906) FhuC [Rhizobium leguminosarum] 102 2e-21
dbj|BAA30472| (AP000006) 308aa long hypothetical ATP-bindin... 102 2e-21
gb|AAD35676.1|AE001734_3 (AE001734) amino acid ABC transpor... 102 3e-21
emb|CAB15283| (Z99120) similar to iron(III) dicitrate trans... 102 4e-21
gb|AAF30499.1|AE002109_2 (AE002109) ABC transporter [Ureapl... 101 6e-21
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER AT... 101 6e-21
sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 101 6e-21
gb|AAA58003.1| (U18997) ORF_o241 [Escherichia coli] >gi|178... 101 6e-21
emb|CAB73179.1| (AL139076) ABC-type amino-acid transporter ... 101 8e-21
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 101 8e-21
emb|CAB52849.1| (AL109848) putative iron-siderophore uptake... 101 8e-21
dbj|BAA29913| (AP000003) 312aa long hypothetical ATP-bindin... 101 8e-21
gb|AAD36730.1|AE001808_5 (AE001808) ABC transporter, ATP-bi... 100 1e-20
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING P... 100 1e-20
emb|CAB61720.1| (AL133220) ABC transport protein, ATP-bindi... 100 1e-20
emb|CAB49054.1| (AJ248283) cobalt ABC transporter, ATP-bind... 100 1e-20
gi|4155391 (AE001511) IRON(III) DICITRATE TRANSPORT SYSTEM ... 100 1e-20
gi|2621547 (AE000832) sulfate transport system ATP-binding ... 100 1e-20
sp|O05732|Y888_HELPY PROBABLE IRON CHELATIN TRANSPORT ATP-B... 100 1e-20
sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEI... 100 1e-20
pir||B36931 hypothetical protein (sfp0 5' region) - Bacillu... 100 1e-20
gb|AAF12128.1|AE002088_5 (AE002088) iron ABC transporter, A... 100 2e-20
gb|AAD36131.1|AE001765_10 (AE001765) ABC transporter, ATP-b... 100 2e-20
emb|CAA05520| (AJ002531) nosF [Bradyrhizobium japonicum] 100 2e-20
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING P... 100 2e-20
emb|CAB73160.1| (AL139076) putative glutamine transport ATP... 99 2e-20
gi|805090 (U17255) NisF [Lactococcus lactis] >gi|1095449|pr... 99 2e-20
dbj|BAA11402| (D78508) YfiL [Bacillus subtilis] >gi|2633155... 99 3e-20
pir||S49597 ATP-binding protein - Lactococcus lactis >gi|57... 99 3e-20
emb|CAA15259| (AJ235273) FERRIC TRANSPORT ATP-BINDING PROTE... 99 4e-20
sp|P56344|CYSA_CHLVU PROBABLE SULFATE TRANSPORT ATP-BINDING... 99 4e-20
pir||QRECFH ferrichrome-iron transport protein fhuC - Esche... 99 4e-20
gb|AAD35568.1|AE001726_2 (AE001726) ABC transporter, ATP-bi... 98 5e-20
emb|CAB73039.1| (AL139076) ABC transport system ATP-binding... 98 7e-20
gb|AAD36335.1|AE001781_6 (AE001781) phosphate ABC transport... 98 7e-20
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING ... 98 7e-20
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING P... 98 7e-20
gi|2649183 (AE001008) branched-chain amino acid ABC transpo... 98 9e-20
sp|P39456|YCKI_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER AT... 97 1e-19
emb|CAB14684| (Z99117) glutamine ABC transporter (ATP-bindi... 97 1e-19
sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 97 1e-19
pir||I40452 ABC-type transport system probable ATP binding ... 97 1e-19
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein ... 97 2e-19
gi|2688689 (AE001175) ABC transporter, ATP-binding protein ... 97 2e-19
gi|2650561 (AE001100) nitrate ABC transporter, ATP-binding ... 97 2e-19
gb|AAD35283.1|AE001704_4 (AE001704) iron(III) ABC transport... 96 2e-19
dbj|BAA30009| (AP000004) 324aa long hypothetical resistance... 96 2e-19
pir||A64409 ferric enterobactin transport ATP-binding prote... 96 2e-19
gi|2967534 (U64516) unknown [Shigella dysenteriae] 96 3e-19
gi|2194195 (U61158) GdmF [Staphylococcus gallinarum] 96 3e-19
sp|P44656|Y354_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 96 3e-19
sp|P41076|GLTL_ECOLI GLUTAMATE/ASPARTATE TRANSPORT ATP-BIND... 96 3e-19
sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PRO... 96 3e-19
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 96 4e-19
gb|AAC45331.1| (U97348) ATP-binding protein homolog [Lactob... 96 4e-19
gb|AAD25906.1|AF069302_15 (AF069302) ABC transporter subuni... 95 5e-19
gi|4155205 (AE001497) putative abc transporter, ATP-binding... 95 5e-19
gi|3044094 (AF055999) ATPase component [Pseudomonas aerugin... 95 5e-19
sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 95 5e-19
sp|P07655|PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING PROTEI... 95 5e-19
dbj|BAA22864| (D89963) peripheral membrane protein [Enterob... 95 6e-19
gb|AAD07765.1| (AE000584) ABC transporter, ATP-binding prot... 95 6e-19
emb|CAA69520| (Y08257) putative ABC transporter [Sulfolobus... 95 6e-19
sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTE... 95 6e-19
emb|CAB49582.1| (AJ248285) daunorubicin resistance ATP-bind... 94 8e-19
pir||D35718 phnC protein - Escherichia coli >gi|147196 (J05... 94 8e-19
emb|CAA61303| (X88849) ceuD [Campylobacter coli] 94 1e-18
gb|AAF12223.1|AE001862_49 (AE001862) amino acid ABC transpo... 94 1e-18
dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escheric... 94 1e-18
gi|3978166 (AF047427) ATPase FbpC [Pasteurella haemolytica] 94 1e-18
sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|1552775 (U7... 94 1e-18
emb|CAA63958| (X94292) cbiO [Methanobacterium thermoautotro... 94 1e-18
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTE... 94 1e-18
dbj|BAA82350.1| (AB029612) ORF1 [Lactobacillus gasseri] 93 2e-18
sp|P75370|P29_MYCPN PROBABLE ABC TRANSPORTER ATP-BINDING PR... 93 2e-18
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enteroco... 93 2e-18
gb|AAD18384| (AE001609) ABC Transport ATPase (Nitrate/Fe) [... 93 2e-18
gi|2317737 (AF013987) putative ABC transporter ATP-binding ... 93 2e-18
sp|P47532|P29_MYCGE PROBABLE ABC TRANSPORTER ATP-BINDING PR... 93 2e-18
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 92 3e-18
emb|CAB73650.1| (AL139079) putative ABC transport system AT... 92 3e-18
emb|CAB75243.1| (AL139075) ABC-type transmembrane transport... 92 3e-18
gi|3800827 (AF076684) oligopeptide transporter putative ATP... 92 3e-18
gi|2984365 (AE000776) ABC transporter [Aquifex aeolicus] 92 3e-18
gi|2293251 (AF008220) putative amino acid transporter [Baci... 92 3e-18
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [St... 92 4e-18
dbj|BAA80299.1| (AP000061) 250aa long hypothetical high-aff... 92 4e-18
emb|CAB37661| (AJ224479) cdd4-like protein [Bacillus sphaer... 92 4e-18
emb|CAA11111| (AJ223088) hypothetical protein [Pseudomonas ... 92 4e-18
pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alc... 91 7e-18
emb|CAA14960| (AJ235272) ABC TRANSPORTER ATP-BINDING PROTEI... 90 1e-17
pir||F36889 leuD 3'-region hypothetical protein - Lactococc... 90 2e-17
bbs|63859 (S63858) orf 5' of rpoN [Rhizobium, NGR234, Pepti... 90 2e-17
sp|Q02151|YLUD_LACLA HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 90 2e-17
pir||B64458 high-affinity branched-chain amino acid transpo... 89 3e-17
gb|AAD36474.1|AE001793_4 (AE001793) antibiotic ABC transpor... 89 4e-17
gb|AAD35875.1|AE001747_18 (AE001747) ABC transporter, ATP-b... 89 5e-17
gi|3322495 (AE001204) cobalt ABC transporter, ATP-binding p... 88 6e-17
sp|P25885|YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING P... 88 6e-17
gi|1046230 (U23471) ABC-type permease homolog [Rhizobium le... 88 8e-17
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium av... 87 1e-16
gb|AAD35847.1|AE001746_8 (AE001746) ABC transporter, ATP-bi... 87 1e-16
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PR... 87 1e-16
gi|2688562 (AE001165) spermidine/putrescine ABC transporter... 87 1e-16
gi|1513298 (U66526) AbcA [Dictyostelium discoideum] 87 1e-16
emb|CAA69462| (Y08256) daunorubicin resistance ATP-binding ... 87 2e-16
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi... 86 2e-16
gb|AAD53035.1|AF115538_1 (AF115538) TAP2B protein [Oncorhyn... 85 4e-16
dbj|BAA80040.1| (AP000060) 250aa long hypothetical iron (II... 85 4e-16
emb|CAB05919| (Z83329) transport-associated protein [Salmo ... 85 5e-16
gi|1573662 (U32749) ATP-binding transport protein (cydD) [H... 85 5e-16
gb|AAD20382| (AF125999) daunorubicin resistance protein A [... 85 7e-16
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 85 7e-16
gi|2648659 (AE000972) daunorubicin resistance ATP-binding p... 84 9e-16
gi|2621521 (AE000829) methyl coenzyme M reductase system, c... 84 9e-16
gb|AAD36105.1|AE001764_8 (AE001764) ABC transporter, ATP-bi... 84 1e-15
emb|CAB13408| (Z99112) similar to ABC transporter (ATP-bind... 84 1e-15
dbj|BAA81596.1| (AP000064) 333aa long hypothetical ABC tran... 83 2e-15
gi|2622194 (AE000880) ABC transporter (ATP-binding [Methano... 83 2e-15
emb|CAA16215| (AL021411) cobalt transport system ATP bindin... 83 3e-15
gb|AAD18862| (AE001653) ABC Transporter ATPase [Chlamydia p... 82 3e-15
gi|1698421 (U40139) ComA [Streptococcus gordonii] 82 3e-15
pir||S21957 P-glycoprotein pgp1 - Arabidopsis thaliana 82 3e-15
pir||A42150 P-glycoprotein atpgp1 - Arabidopsis thaliana >g... 82 3e-15
gb|AAD36035.1|AE001758_13 (AE001758) ribose ABC transporter... 82 5e-15
gi|2746911 (AF040659) similar to the ATP-binding transport ... 82 6e-15
dbj|BAA11737| (D83026) homologous to many ATP-binding trans... 82 6e-15
dbj|BAA10337| (D64001) phosphate transport ATP-binding prot... 82 6e-15
dbj|BAA83014.1| (AB028985) KIAA1062 protein [Homo sapiens] 80 1e-14
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-bin... 80 2e-14
gb|AAF12577.1|AE001826_46 (AE001826) hemin ABC transporter,... 80 2e-14
gi|4204793 (U52079) P-glycoprotein [Solanum tuberosum] 80 2e-14
ref|NP_009937.1|ADP1| Active transport ATPase; Adp1p >gi|11... 78 9e-14
emb|CAB08051| (Z94043) hypothetical protein [Bacillus subti... 76 2e-13
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabido... 75 5e-13
gi|439854 (U04640) Pfmdr2 protein [Plasmodium falciparum] 75 5e-13
gi|294167 (L13381) transport protein [Plasmodium falciparum] 75 5e-13
pir||S42925 probable transport protein - Staphylococcus aur... 75 5e-13
gb|AAC45344.1| (AF100324) putative ATPase [Mycoplasma ferme... 75 6e-13
gb|AAB62237.1| (AF002180) TAP2 [Oncorhynchus mykiss] 73 2e-12
sp|P06611|BTUD_ECOLI VITAMIN B12 TRANSPORT ATP-BINDING PROT... 73 3e-12
dbj|BAA80916.1| (AP000062) 284aa long hypothetical ABC tran... 72 4e-12
emb|CAB05222.1| (Z82272) predicted using Genefinder; simila... 72 5e-12
gb|AAC69223| (AF101313) similar to the ATP-binding transpor... 72 5e-12
emb|CAA21885.1| (AL033385) abc transporter [Schizosaccharom... 71 9e-12
emb|CAA16126.1| (AL021287) hypothetical protein Rv3041c [My... 71 9e-12
gi|1698672 (U66305) ABC transporter [Schizosaccharomyces po... 71 9e-12
gi|1166606 (U46673) Similar to multidrug-resistance protein... 71 1e-11
dbj|BAA29272.1| (AP000001) 362aa long hypothetical maltose/... 70 2e-11
dbj|BAA28332| (AB010293) ATP binding component of ABC-trans... 70 2e-11
pir||I76773 ATP binding component of ABC-transporter - Esch... 70 2e-11
emb|CAA76658.2| (Y17151) multidrug resistance protein 3 (AB... 69 3e-11
sp|O15438|MRP3_HUMAN CANALICULAR MULTISPECIFIC ORGANIC ANIO... 69 3e-11
gb|AAD01430.1| (AF009670) MRP3 [Homo sapiens] 69 3e-11
ref|NP_003777.1|| ATP-binding cassette, sub-family C (CFTR/... 69 3e-11
dbj|BAA28340| (AB010295) ATP binding component of ABC-trans... 69 3e-11
dbj|BAA28146| (AB010887) multidrug resistance-associated pr... 69 3e-11
gi|1518137 (U66261) multidrug resistance related protein 2 ... 69 3e-11
gb|AAD53034.1|AF115537_1 (AF115537) TAP2 protein [Oncorhync... 69 3e-11
dbj|BAA78972.1| (AP000058) 492aa long hypothetical ABC tran... 69 3e-11
emb|CAA22142.1| (AL033536) predicted using Genefinder; simi... 67 1e-10
emb|CAA19324.1| (AL023780) putative RNASE L inhibitor [Schi... 67 1e-10
sp|Q00748|MDR5_DROME MULTIDRUG RESISTANCE PROTEIN HOMOLOG 6... 67 1e-10
sp|P77257|EGO_ECOLI PUTATIVE ABC TRANSPORTER ATP-BINDING PR... 67 2e-10
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSP... 66 2e-10
gi|3426368 (AF082738) ABC transporter ATP-binding protein [... 66 4e-10
pir||JN0849 hypothetical 35K protein - Streptomyces lividan... 66 4e-10
pir||S63672 RNase L inhibitor (clone 8) - human >gi|1587696... 65 5e-10
sp|P41233|ABC1_MOUSE ATP-BINDING CASSETTE TRANSPORTER 1 >gi... 65 5e-10
gb|AAD51594.1|AF110027_1 (AF110027) ATP-dependent transport... 64 9e-10
gb|AAD38404.1|AF155237_1 (AF155237) cystic fibrosis transme... 64 9e-10
gi|3273417 (U90446) RNAse L inhibitor [Mus musculus] 64 9e-10
sp|Q92337|ABC1_SCHPO ATP-BINDING CASSETTE TRANSPORTER ABC1 ... 64 9e-10
ref|NP_005493.1|| ATP-binding cassette 1 >gi|4128033|emb|CA... 64 1e-09
emb|CAA14677| (AJ235270) ABC TRANSPORTER ATP-BINDING PROTEI... 64 1e-09
ref|NP_000341.1|| ATP binding cassette transporter >gi|1888... 64 1e-09
emb|CAA82384.2| (Z29117) similar to ABC transporters; cDNA ... 64 1e-09
emb|CAA82383.2| (Z29117) similar to ATP-binding transport p... 64 1e-09
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CH... 64 1e-09
gi|3172341 (AF049142) ATP-binding cassette transporter [Cae... 64 1e-09
pir||S60124 transport protein homolog C48B4.4 - Caenorhabdi... 64 1e-09
emb|CAA16710.1| (AL021687) RNase L inhibitor-like protein [... 63 2e-09
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE ... 63 3e-09
gi|3243082 (AF000148) ATP-binding cassette transporter [Hom... 63 3e-09
emb|CAA75729| (Y15635) ABCR [Homo sapiens] 63 3e-09
gi|2959643 (AF001945) rim ABC transporter [Homo sapiens] 63 3e-09
emb|CAA14775| (AJ235271) ALKALINE PROTEASE SECRETION ATP-BI... 62 3e-09
ref|NP_031404.1|| ATP-binding cassette, sub-family A (ABC1)... 62 3e-09
gi|1943947 (U90126) ABC transporter [Bos taurus] 62 4e-09
ref|NP_002931.1|| ATP-binding cassette, sub-family E (OABP)... 62 4e-09
dbj|BAA80104.1| (AP000060) 604aa long hypothetical RNase L ... 62 6e-09
gi|2688485 (AE001158) ABC transporter, ATP-binding protein ... 62 6e-09
dbj|BAA88897.1| (AB020209) multidrug resistance protein (MR... 61 1e-08
gb|AAB71758.2| (U83661) multidrug resistance protein 5 [Hom... 61 1e-08
dbj|BAA76608.1| (AB019002) MRP5 [Homo sapiens] 61 1e-08
ref|NP_005679.1|| ATP-binding cassette, sub-family C (CFTR/... 61 1e-08
dbj|BAA22887| (AB005659) a short type of multidrug resistan... 61 1e-08
gb|AAD37716.1|AF146074_1 (AF146074) ABC protein [Homo sapiens] 60 2e-08
dbj|BAA76609.1| (AB019003) MRP5 [Mus musculus] 60 2e-08
sp|P54718|YFIB_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDI... 60 2e-08
gb|AAF06736.1| (AF167431) sulfonyl urea receptor [Drosophil... 59 4e-08
emb|CAB11328| (Z98604) ABC-type sugar transport protein [My... 59 4e-08
gi|3800822 (AF076683) oligopeptide transporter putative ATP... 58 7e-08
gi|2688212 (AE001138) methylgalactoside ABC transporter, AT... 58 7e-08
gb|AAD38185.1|AF154001_1 (AF154001) MRP3s1 protein [Homo sa... 57 1e-07
emb|CAA52920| (X74987) 2'-5' oligoadenylate binding protein... 57 1e-07
emb|CAB60262.1| (AJ250862) MrsT protein [Bacillus sp. HIL-Y... 57 1e-07
emb|CAA14828| (AJ235271) ABC TRANSPORTER ATP-BINDING PROTEI... 55 6e-07
emb|CAA17252| (AL021899) hypothetical protein Rv2038c [Myco... 55 7e-07
gi|2439970 (U83659) multidrug resistance-associated protein... 55 7e-07
gi|4193356 (AF055088) ATP-binding cassette; PsaB [Streptococcus pneumoniae]
Length = 240
Score = 298 bits (754), Expect = 4e-80
Identities = 143/234 (61%), Positives = 180/234 (76%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI +NL+V Y E LKDI L + ITGIIGPNGAGKSTL+K +L I+PH + ++
Sbjct: 1 MIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQMQAFLD 60
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
+ KK L +IAYVEQK +ID+ FPIKVKECVSLG + + LF+ L AK W +V EAL+
Sbjct: 61 DKEVKKSLHRIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEI 120
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V L DY RQI +LSGGQFQRVL+ARCLVQEADYI LDEPF GIDS+SE+IIM+ L+DLK
Sbjct: 121 VGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNTLRDLK 180
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
GKT+LIVHHDLSK+ YFD ++++NRE+IA+GP E F++ NLK+AYG+ +F
Sbjct: 181 KAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTEETFTETNLKEAYGNQLF 234
sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN SCAA 5'REGION
(ORF1) >gi|310631 (L11577) ATP binding protein
[Streptococcus gordonii]
Length = 251
Score = 284 bits (719), Expect = 5e-76
Identities = 136/235 (57%), Positives = 179/235 (75%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI +NL+V Y L + + ITGIIGPNGAGKSTLIK +L IV H G+ L++
Sbjct: 13 MIEIQNLSVSYQGQLALDKANVTIKGPTITGIIGPNGAGKSTLIKGLLGIVDHQGQALLD 72
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G+ K+LK+IAYVEQK +ID+ FPIKVKECVSLG Y +KLFQ+L +W +V++AL+
Sbjct: 73 GQPLDKELKRIAYVEQKINIDYNFPIKVKECVSLGLYPKIKLFQRLKTSDWDKVNQALKI 132
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V L D+ RQI +LSGGQFQRVL+ARCLVQEADYIFLDEPFVGIDS+SE+IIM L+ L+
Sbjct: 133 VGLEDFAERQISQLSGGQFQRVLIARCLVQEADYIFLDEPFVGIDSVSEEIIMKTLRQLR 192
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
GKTILIVHHDLSKV YFD +++LN++++A+G F+++N+++ YG +F+
Sbjct: 193 KDGKTILIVHHDLSKVVAYFDQVLLLNKKVVAFGSTESTFTKENMQQTYGSQLFM 247
pir||S61910 hypothetical protein 5 - Streptococcus parasanguis >gi|567769
(M26130) ORF5; predicted protein shows similarity to
ATP-binding transport proteins AmiE and AmiF of
Streptococcus pneumoniae; disruptuion of ORF5 leads to
aminopterin resistance [Streptococcus parasanguis]
Length = 240
Score = 276 bits (699), Expect = 1e-73
Identities = 136/236 (57%), Positives = 178/236 (74%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI ++L+V Y + L+D+ L + I GI+GPNGAGKSTLIKA+L ++PHSG + ++
Sbjct: 1 MIQIEHLSVAYQQTLALEDLSLTIQGPTILGILGPNGAGKSTLIKAMLGLLPHSGRVQLD 60
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
+ + L+++AYVEQKS ID FPI V+ECVSLG Y L +F++ ++ +V AL+
Sbjct: 61 QKDLSQVLQRVAYVEQKSAIDFHFPITVRECVSLGLYPHLSIFKRKSKEDLKKVENALKL 120
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
VNLLD +RQIG+LSGGQFQRVL+ARCLVQEAD IFLDEPF GIDS+SE IIM LQ LK
Sbjct: 121 VNLLDLADRQIGQLSGGQFQRVLIARCLVQEADVIFLDEPFAGIDSVSEDIIMQTLQTLK 180
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFIG 236
+GKTILIVHHDLSKV YFD +++L+R+LIA+G E F+++NL AYG +FIG
Sbjct: 181 QEGKTILIVHHDLSKVPAYFDKVLLLHRKLIAFGKTEETFTKENLHAAYGHELFIG 236
gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein MtsB [Streptococcus pyogenes]
Length = 241
Score = 271 bits (685), Expect = 5e-72
Identities = 133/237 (56%), Positives = 182/237 (76%), Gaps = 1/237 (0%)
Query: 1 MINTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILI 59
MI T NL V Y+ N L+ I + + I GIIGPNGAGKST +KAILN++ + G + +
Sbjct: 1 MITTNNLCVTYDGNSNALEAINVTIEGPSIVGIIGPNGAGKSTFMKAILNLIDYQGHVTV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+G+ +K +AYVEQ+S ID+ FPI VKECV+LGTY+ L LF+++G K++ +V + L+
Sbjct: 61 DGKDGRKLGHTVAYVEQRSMIDYNFPITVKECVALGTYSKLGLFRRVGKKQFEQVDKVLK 120
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+V L D+ +R I LSGGQFQR+L+ARCL+QE+DYIFLDEPFVGIDS+SEKII+D+L++L
Sbjct: 121 QVGLEDFGHRPIKSLSGGQFQRMLVARCLIQESDYIFLDEPFVGIDSVSEKIIVDLLKEL 180
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFIG 236
K GKTILIVHHDLSKV+ YFD ++ILN+ L+AYG + E F+ L KAYG+++ +G
Sbjct: 181 KMAGKTILIVHHDLSKVEHYFDKLMILNKHLVAYGNVCEVFTVDTLSKAYGNHLILG 237
gi|3790618 (AF097414) EfmC [Enterococcus faecium]
Length = 247
Score = 240 bits (605), Expect = 1e-62
Identities = 120/224 (53%), Positives = 165/224 (73%), Gaps = 1/224 (0%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEVSKKQLK 69
Y VLK I L + P +ITGIIGPNGAGKST +K++L ++P + G++ ++G+ K
Sbjct: 14 YQGKTVLKTINLTINPQKITGIIGPNGAGKSTFMKSLLELIPATTGKVTLSGQPVNSVRK 73
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENR 129
KIAYVEQ+S++D +FP+ V V LGTY L++ Q+ G R +AL+KV L +Y R
Sbjct: 74 KIAYVEQRSELDLSFPVMVIGVVLLGTYPSLRIGQRPGKPGKERARQALKKVGLEEYAKR 133
Query: 130 QIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
QI ELSGGQ QRV +AR L Q A++IFLDEPFVGID++SE+ I DILQ+LK+ GKTILIV
Sbjct: 134 QISELSGGQLQRVFIARALAQGAEWIFLDEPFVGIDALSERKIFDILQELKNSGKTILIV 193
Query: 190 HHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
HH L KV EYFD++I++N++LIA GP+ E+F+ ++L+ YG+ I
Sbjct: 194 HHFLHKVDEYFDEVILVNKQLIASGPVQESFTSEDLQLPYGEII 237
gi|2293152 (AF008220) putative transporter [Bacillus subtilis]
>gi|2635560|emb|CAB15054| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 250
Score = 211 bits (532), Expect = 4e-54
Identities = 108/233 (46%), Positives = 150/233 (64%), Gaps = 1/233 (0%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILIN 60
+ N+ V Y++ VL+DI L+V G++ GIIGPNGAGKSTLIK IL +VP SG+I I
Sbjct: 4 VELDNVTVAYHKKPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDISIY 63
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G+ K Q +I YV Q+ +D FP + V +G Y + L ++ + AL K
Sbjct: 64 GKDYKDQRTRIGYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLLKRPKKADVEMAKAALTK 123
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V + DY RQI +LSGGQ QRV LAR L Q AD F+DEPF G+D+ +E+ IM +L +LK
Sbjct: 124 VGMHDYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTLLAELK 183
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+GKT+L+VHHDL ++YFD I++L+ IA+GP F+ +NL+K YG +
Sbjct: 184 EKGKTVLVVHHDLQTAEDYFDWILLLHLRKIAFGPTENVFTIENLQKTYGGRL 236
gi|1777934 (U55214) TroB [Treponema pallidum] >gi|3322432 (AE001201) ABC
transporter, ATP-binding protein (troB) [Treponema
pallidum]
Length = 266
Score = 205 bits (517), Expect = 2e-52
Identities = 103/233 (44%), Positives = 157/233 (67%), Gaps = 1/233 (0%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
+ +L + Y + VL D+ + + G I IIGPNGAGKSTL+KAI+ ++P SGE+ +
Sbjct: 11 VQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVRVF 70
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G K+ +++AYV Q+S +D FP V + V +G+Y L + G +E +R EA+++
Sbjct: 71 GRPFSKERRRVAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWILRPGKREKARAREAIEE 130
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V + + +RQI ELSGGQ QRV LAR LVQ+AD F+DEPF G+D+ +E+ I+ +L+ LK
Sbjct: 131 VGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIVTLLKTLK 190
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+GKT+L+VHHDL V EYFD +++LN +IA G + F+++ +++AYG I
Sbjct: 191 GRGKTLLVVHHDLQTVAEYFDRVLLLNVRVIAEGAVVSAFTEEYVQRAYGGRI 243
gi|1335913 (U52850) unknown [Erysipelothrix rhusiopathiae]
Length = 246
Score = 203 bits (510), Expect = 2e-51
Identities = 99/233 (42%), Positives = 155/233 (66%), Gaps = 1/233 (0%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I ++L V Y+ VL D ++ G++T I+GPNGAGKST+IKAI+ ++ P SG+I IN
Sbjct: 8 IEVEDLTVTYDVKPVLWDCDVKFEKGKLTAIVGPNGAGKSTMIKAIMGLLKPISGKITIN 67
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G+ K + K IAYV Q +D FP V++ V +G Y + ++ ++ +E L++
Sbjct: 68 GQHQKDEYKNIAYVPQSGSVDWDFPATVEDIVLMGRYGHIGWIKRPRKEDREIANEMLER 127
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V + Y +RQI +LSGGQ QRV LAR L Q+A+ LDEP G+D +E+I+M +L++L
Sbjct: 128 VGMSAYRDRQISQLSGGQQQRVFLARALTQQAEIYILDEPLKGVDVKTEEILMTLLKELA 187
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
GKT+++VHHDL+ ++ YFD+I ++N +L+A+GP+ F+Q+NLK Y ++
Sbjct: 188 ASGKTVIVVHHDLTSIEGYFDNIALVNVKLVAWGPVQNTFTQENLKLTYHTDV 240
emb|CAA67569| (X99127) ATP binding protein [Staphylococcus epidermidis]
Length = 248
Score = 191 bits (481), Expect = 4e-48
Identities = 101/230 (43%), Positives = 142/230 (60%), Gaps = 1/230 (0%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEV-IPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILI 59
M+ +LN+F + +LKDI + I G I GI+GPNGAGKS+L+KA + +G+ +
Sbjct: 1 MLEVNHLNLFLGKKHILKDITFSLPINGEIIGIVGPNGAGKSSLLKAFIGEFKATGKHTL 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
QL+ I Y+ QK+ ID FPIKV + + G Y + F+K E +++++ L
Sbjct: 61 YDHPIHTQLRYITYIPQKAHIDLDFPIKVDQVILSGCYEDIGWFKKASVVEKTKLNQLLN 120
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+ L +RQI ELSGGQ QRVL+AR L+ +D LDEPFVGID SE++IM ++ L
Sbjct: 121 DLELDHIRHRQIAELSGGQLQRVLVARALMSNSDIYCLDEPFVGIDIYSEQLIMKKIKHL 180
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
+H GK ILIVHHDLSK +YFD I++LN+ L GP E S + L +
Sbjct: 181 RHMGKLILIVHHDLSKADQYFDRILLLNQSLQFLGPTKEALSSERLNATF 230
sp|P48334|YCXD_CYAPA PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN YCF23-APCF
INTERGENIC REGION (ORF244) >gi|1016217 (U30821) putative
protein of 244 amino acids [Cyanophora paradoxa]
Length = 244
Score = 186 bits (468), Expect = 1e-46
Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 1/234 (0%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILIN 60
+ NL V Y VL++I L + G++ GIIGPNGAGKSTL+K I+ I P SGEI
Sbjct: 9 LEINNLTVSYPHGTVLQNIFLTIESGKLIGIIGPNGAGKSTLLKTIIEQIKPISGEIFYQ 68
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G K Q +I YV Q++ +D FPI V + V + + F K + V AL+K
Sbjct: 69 GAPLKNQRARIGYVPQRAQVDWDFPINVWDVVMMARLKKIGWFSSYSKKSYECVKAALEK 128
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V++L Y++R I ELSGGQ QRV LAR L QEAD + LDEPF G+D ++KII +L++
Sbjct: 129 VDMLKYKDRNIRELSGGQQQRVFLARLLAQEADLLLLDEPFTGVDFQTQKIIFSLLKEQI 188
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
K ++++HHDL + FD++I+LN+++I++ + + K L +G++I+
Sbjct: 189 ASNKIVIVIHHDLGESIINFDELILLNKKIISHDLTTKILNSKKLSTLFGEHIY 242
gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chlamydia trachomatis]
Length = 286
Score = 179 bits (450), Expect = 2e-44
Identities = 92/229 (40%), Positives = 146/229 (63%), Gaps = 1/229 (0%)
Query: 3 NTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING 61
+ ++L V Y+ + VL I + G + IIGPNGAGKSTL+KA L ++ SG+ L G
Sbjct: 35 SVEDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFG 94
Query: 62 EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV 121
+ K +IAY+ Q++ +D FP+ V + V +G Y ++ ++ + L++V
Sbjct: 95 QRFSKAHHRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWNRISTDDRQEAMRILERV 154
Query: 122 NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
L + NRQIG+LSGGQ QR LAR L+Q+AD +DE F ID S ++++D+LQ+LK
Sbjct: 155 GLEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQELKS 214
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+GKTI+++HHDLS V++ FD +I+LN+ L+ G + E +++ + +AYG
Sbjct: 215 EGKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYG 263
gb|AAC67659.1| (AE001281) rRNA methylase [Chlamydia trachomatis]
Length = 259
Score = 179 bits (449), Expect = 2e-44
Identities = 92/229 (40%), Positives = 146/229 (63%), Gaps = 1/229 (0%)
Query: 3 NTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING 61
+ ++L V Y+ + VL I + G + IIGPNGAGKSTL+KA L ++ SG+ L G
Sbjct: 10 SVEDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFG 69
Query: 62 EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV 121
+ K +IAY+ Q++ +D FP+ V + V +G Y ++ ++ + L++V
Sbjct: 70 QRFSKVHHRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWNRISTDDRQEAMRILERV 129
Query: 122 NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
L + NRQIG+LSGGQ QR LAR L+Q+AD +DE F ID S ++++D+LQ+LK
Sbjct: 130 GLEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQELKS 189
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+GKTI+++HHDLS V++ FD +I+LN+ L+ G + E +++ + +AYG
Sbjct: 190 EGKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYG 238
sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING PROTEIN MNTA
>gi|1084178|pir||S55046 mntA protein - Synechocystis sp
>gi|755076 (L34630) mntA gene product [Synechocystis
sp.] >gi|1653001|dbj|BAA17918| (D90910) Mn transporter
MntA [Synechocystis sp.]
Length = 260
Score = 179 bits (449), Expect = 2e-44
Identities = 96/233 (41%), Positives = 147/233 (62%), Gaps = 4/233 (1%)
Query: 2 INTKNLNVFYNENKV-LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
I+ ++V YN ++ L + V PG IT ++GPNG+GKSTL K+I+ + P G + I
Sbjct: 10 ISVDGVSVTYNNARLALYNATCTVEPGTITALVGPNGSGKSTLFKSIMGFLQPSQGRVRI 69
Query: 60 NG-EVSKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
G V K Q +++ AYV Q ++D FP+ V + V +G Y + + + AK+ V E+
Sbjct: 70 GGFSVQKAQKQQLMAYVPQADEVDWNFPVSVFDVVMMGRYGYMNVLRIPSAKDRRLVMES 129
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L++V ++ Y +RQIGELSGGQ +R LAR L QE I LDEPF G+D +EK ++D+L
Sbjct: 130 LERVGMVKYRDRQIGELSGGQKKRAFLARALAQEGKVILLDEPFTGVDVKTEKGMIDLLM 189
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+L+ +G TILI HDL+ + + D I+LNR ++A G E F+++NL+ +G
Sbjct: 190 ELRDEGHTILISTHDLASISTFCDHTILLNRTILAQGKTEETFTKENLELTFG 242
gb|AAD18492| (AE001619) rRNA methylase [Chlamydia pneumoniae]
Length = 259
Score = 176 bits (441), Expect = 2e-43
Identities = 93/229 (40%), Positives = 140/229 (60%), Gaps = 1/229 (0%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVS 64
NL V Y VL I + G +T I+GPNGAGKSTL+KA L ++ P SG + +
Sbjct: 13 NLCVNYEHAAVLYHISFSLGKGSLTAILGPNGAGKSTLLKASLGLIKPSSGTVYFFNQKF 72
Query: 65 KKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLL 124
KK ++IAY+ Q++ +D FP+ V + +G Y+ ++ ++ + + L++V L
Sbjct: 73 KKVRQRIAYMPQRASVDWDFPMTVLDLALMGCYSYKGMWGRISSDDRREAFHILERVGLE 132
Query: 125 DYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK 184
+RQIG+LSGGQ QR LAR L+Q+AD +DE F ID S K + +LQ+L+ QGK
Sbjct: 133 SVADRQIGQLSGGQQQRAFLARALMQKADLYLMDELFSAIDMASFKTSVGVLQELRDQGK 192
Query: 185 TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
TI++VHHDLS V++ FD +++LN+ LI GP +E + + + YG I
Sbjct: 193 TIVVVHHDLSHVRQLFDHVVLLNKRLICCGPTDECLNGDTIFQTYGCEI 241
gi|1245465 (U50597) YfeB [Yersinia pestis]
Length = 296
Score = 167 bits (418), Expect = 1e-40
Identities = 87/229 (37%), Positives = 142/229 (61%), Gaps = 4/229 (1%)
Query: 6 NLNVFYNE-NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV 63
N+ V YN + + D + G I ++G NG+GKSTL K+I+ +V P G++ ++ +
Sbjct: 15 NVTVTYNNGHTAIYDASFSLTGGTICALVGVNGSGKSTLFKSIMGLVKPSVGKVELSHKP 74
Query: 64 SKKQLKK--IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV 121
LK+ IAYV Q D+D FP+ V++ V +G Y + + ++ + V++++++V
Sbjct: 75 ISHALKQNTIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDKAIVNKSIERV 134
Query: 122 NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
L +RQIGELSGGQ +RV LAR L Q+ + LDEPF G+D +E I+++LQ L+
Sbjct: 135 GLTALRSRQIGELSGGQKKRVFLARALAQQGTLLLLDEPFTGVDVKTENAIIELLQSLRD 194
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+G IL+ H+L V E+ D +I++N+ ++A GPI F+QKNL+ +G
Sbjct: 195 EGHLILVSTHNLGSVPEFCDHVILINQTVLAAGPIETTFTQKNLEMTFG 243
sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING PROTEIN FECE HOMOLOG
>gi|1074938|pir||F64063 iron(III) dicitrate transport
ATP-binding protein FECE homolog - Haemophilus
influenzae (strain Rd KW20) >gi|1573329 (U32720) iron
(chelated) transporter, ATP-binding protein (yfeB)
[Haemophilus influenzae Rd]
Length = 306
Score = 165 bits (413), Expect = 4e-40
Identities = 86/224 (38%), Positives = 137/224 (60%), Gaps = 3/224 (1%)
Query: 10 FYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQL 68
+ N + + ++ + G I ++G NG+GKSTL K+I+ +V P GEI + + L
Sbjct: 17 YNNGHTAIHNMTFSLNSGTICALVGVNGSGKSTLFKSIMGLVKPQQGEIKLCDLPISQAL 76
Query: 69 KK--IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
K+ +AYV Q ++D FP+ V + V +G Y + + A + +V EA+Q+VN+
Sbjct: 77 KRNLVAYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRIPKAIDKQKVQEAMQRVNIEHL 136
Query: 127 ENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTI 186
+RQIGELSGGQ +RV LAR L Q++ I LDEPF G+D +E I+D+LQ L+ +G I
Sbjct: 137 AHRQIGELSGGQKKRVFLARALAQQSPIILLDEPFTGVDVKTENAIVDLLQQLREEGHLI 196
Query: 187 LIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
L+ H+L V ++ D ++++NR +IA G + F+Q NL+ +G
Sbjct: 197 LVSTHNLGSVPDFCDQVVMINRTVIAAGKTEDTFNQHNLEIVFG 240
gb|AAD41066.1|AF128999_2 (AF128999) SitB [Salmonella typhimurium]
Length = 273
Score = 163 bits (408), Expect = 1e-39
Identities = 86/223 (38%), Positives = 140/223 (62%), Gaps = 3/223 (1%)
Query: 10 FYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEVSKKQL 68
+ N + L+D +V G I ++G NG+GKSTL KA++ V + G+I I + K L
Sbjct: 15 YRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKAL 74
Query: 69 KK--IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
KK IAYV Q ++D +FP+ V++ V +G Y + ++ A + + V AL +V++ +Y
Sbjct: 75 KKNLIAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEY 134
Query: 127 ENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTI 186
+RQIGELSGGQ +RV LAR + Q+ I LDEPF G+D +E I+D+L++L+ +G+T+
Sbjct: 135 RHRQIGELSGGQKKRVFLARAIAQDGQVILLDEPFTGVDVKTEARIIDLLRELRDEGRTM 194
Query: 187 LIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
L+ H+L V E+ D +++ ++A GP F+ NL++A+
Sbjct: 195 LVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAF 237
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 159 bits (397), Expect = 3e-38
Identities = 90/232 (38%), Positives = 140/232 (59%), Gaps = 6/232 (2%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILINGE- 62
KN+N +Y+ KVL++I +++ G I+GPNGAGKSTL+K IL ++P SGEI + G
Sbjct: 14 KNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEIFVGGID 73
Query: 63 -VSKKQLKKIAYVEQKSDIDHT-FPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
+KK K++YV QK++ ++ FP VKE V G +LFQ +K+ +V + L++
Sbjct: 74 FKNKKTSIKLSYVSQKANAFNSGFPASVKEVVLSGLTKTKRLFQTFNSKDNEKVIKVLER 133
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
+N+ D ++ I ELSGGQ QRV++AR L+ E + LDEP GID+ + L LK
Sbjct: 134 LNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLK 193
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINE--NFSQKNLKKAYG 230
+G TI++V HD+ V + ++ LN+ L +G +E + + + K YG
Sbjct: 194 QEGITIILVTHDIGVVADTATEVACLNKHLHFHGTTDEFKSLDEVEISKIYG 245
gb|AAD37835.1|AF104349_1 (AF104349) ABC transporter ZurA [Listeria monocytogenes]
Length = 257
Score = 150 bits (374), Expect = 1e-35
Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
+I N++ Y++ L++I +V G TG+IGPNG+GKST++K IL ++ G I +
Sbjct: 4 IIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGSISL 63
Query: 60 NGEVSK--KQLKKIAYVEQKSD-IDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
GE K KI +V QKS+ + FP VKE V+ G LF+ L K+ +
Sbjct: 64 FGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASGLTKKKGLFKTLNNKDKEDIDY 123
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
AL++V + DY +R IGELSGGQ QRV +AR LV + + LDEP VG+D + K ++L
Sbjct: 124 ALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVKAFYELL 183
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINE 218
+L + + T+L+V HDL V Y + +I +N+ +I G +E
Sbjct: 184 AELNRTEEMTLLLVTHDLMAVNTYVNHVISINKRIIFDGSAHE 226
gi|2648557 (AE000966) ABC transporter, ATP-binding protein [Archaeoglobus
fulgidus]
Length = 253
Score = 148 bits (371), Expect = 3e-35
Identities = 83/238 (34%), Positives = 145/238 (60%), Gaps = 11/238 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I +++ YN ++VL D+ L + G ++GPNGAGKST+++ IL ++ P G + +
Sbjct: 3 VIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPTKGTVKV 62
Query: 60 NG----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G + K + ++ Y+ Q+ +I P+ V + + L L +K+G S++
Sbjct: 63 LGYNAFDERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPL---LARGKKVGD---SKLR 116
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
EAL V L + ++ ELSGGQ Q+VLLAR L+ + + + LDEPF G+D S++ I+++
Sbjct: 117 EALSMVGLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQEKIVEV 176
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
L ++ +GKT++ V H+++ + D +++LNR +IA G NE FS++N+ KAYG +I
Sbjct: 177 LAEMSSKGKTVVAVVHNINPLLHNIDRVVLLNRRIIAAGKPNEVFSEENIIKAYGTSI 234
gi|2621685 (AE000842) ABC transporter [Methanobacterium thermoautotrophicum]
Length = 250
Score = 143 bits (356), Expect = 2e-33
Identities = 81/230 (35%), Positives = 129/230 (55%), Gaps = 7/230 (3%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILIN 60
I ++L+ N ++L++I L+V G + +IGPNG GK+TL++ I I P G + +
Sbjct: 6 IEMEDLSYCINGREILRNINLKVPMGELLAVIGPNGGGKTTLLRLITGQIKPTRGTVRVL 65
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G + +I Y+ Q+S + FPI + + V +GTY + F+ + + AL+
Sbjct: 66 GMKPEDSRSRIGYLPQRSHFETDFPINILQTVLIGTY---RRFEAPTDDDRKKALRALKM 122
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V +L+Y +R+IGELSGG+ QRV LAR LV+E D + LDEP +D I+ +L+
Sbjct: 123 VGMLEYRDRKIGELSGGELQRVFLARALVREPDLLLLDEPTASVDPAFRGSFYRIIDELR 182
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ TI+IV HD+ V + D + LN L +G + E + K + AYG
Sbjct: 183 DE-MTIVIVSHDIGTVARHVDSVACLNHRLFVHGTVEE--ALKCIDDAYG 229
gb|AAD35218.1|AE001698_7 (AE001698) zinc ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 240
Score = 141 bits (351), Expect = 7e-33
Identities = 82/233 (35%), Positives = 132/233 (56%), Gaps = 17/233 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEILI 59
++ KNL N+ ++LK++ V G GIIGPNGAGK+TL++ ++ +I + G++ +
Sbjct: 3 IVEVKNLTYRINDFEILKNVTFSVEEGEFVGIIGPNGAGKTTLVRILVGDIKNYEGKVEV 62
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G KI Y+ Q + FPI VKE ++G Y ++K+ +W +V L+
Sbjct: 63 RG--------KIGYLPQLHQVQREFPITVKEFAAMGMYGR---YRKI---DWEKVRSTLK 108
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V +L EN I LSGG+FQR+ LAR L+ + D + LDEP G+D + + ++L L
Sbjct: 109 DVGILHKENDPIKNLSGGEFQRLSLARALLSDPDILVLDEPEAGVDEMGKASFYELLNRL 168
Query: 180 -KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
K + T+++V HD+ V + I+ LNR L +GP E + ++LKK + D
Sbjct: 169 RKEKNITVIMVSHDIGMVFKECSTIMCLNRTLHCHGP-TETINPEDLKKIFTD 220
gb|AAF11830.1|AE002060_9 (AE002060) manganese ABC transporter, ATP-binding protein, putative
[Deinococcus radiodurans]
Length = 239
Score = 138 bits (345), Expect = 3e-32
Identities = 74/230 (32%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
M+ + L V Y L++ L G+ T +IGPNGAGKSTL++A+ ++ + G +
Sbjct: 1 MLGVEGLTVRYGSQVALENATLRFEAGQFTAVIGPNGAGKSTLLRALAGLLTDYEGRVTF 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+ S + ++YV Q+ +D FP+ V + +G L + G ++ V +AL+
Sbjct: 61 DPGHSPRTC--LSYVPQQQTLDWGFPVTVWDTAMMGRTGRLGWLRWPGPRDRQIVEDALR 118
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+ + D +R IG LSGGQ QRVLLAR L ++ + LDEP G+D +++ +M +L+
Sbjct: 119 ETGVYDLRSRHIGALSGGQRQRVLLARMLARQGHLLLLDEPLTGVDVTTQEQLMALLRRQ 178
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
QG+ +++V HDL + + + D I+++NR +IA G + ++ +N++ +
Sbjct: 179 ADQGRAVVMVTHDLEQARRWCDRIVLINRRVIADGTPDAVYTPQNVEATF 228
dbj|BAA17111| (D90903) ABC transporter [Synechocystis sp.]
Length = 289
Score = 132 bits (328), Expect = 3e-30
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 2/211 (0%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I +NL Y VL++I L V G+IGPNG GK+TL+K +L ++ P G + I
Sbjct: 22 VIAVENLFAGYGATPVLENINLRVEERDFLGLIGPNGGGKTTLLKVLLGLIQPQQGTVQI 81
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G ++ + + YV Q + D FP++V + V +G KLF++ ++ + V L+
Sbjct: 82 LGRSVEQGRRYVGYVPQWLEFDRAFPVRVLDVVRMGRLGRGKLFRRYHQQDEAIVRRCLE 141
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+V + D +R +G LSGGQ QRV +AR L + + LDEP +DS ++ I ++L +L
Sbjct: 142 QVGMGDLGDRPLGTLSGGQRQRVYIARALASQPQILLLDEPTANVDSKVQRSIYELLGEL 201
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNREL 210
+Q TI+++ HDL + Y + LNR L
Sbjct: 202 -NQTMTIVMISHDLGAISRYVKTVGCLNRSL 231
dbj|BAA09014| (D50453) homologue of iron dicitrate transport ATP-binding protein
FecE of E. coli [Bacillus subtilis]
>gi|2632683|emb|CAB12190| (Z99106) similar to
ferrichrome ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 252
Score = 131 bits (327), Expect = 4e-30
Identities = 81/237 (34%), Positives = 135/237 (56%), Gaps = 12/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILI 59
M+ +N++ Y VL++ + + G+IT IGPNGAGKSTL+ + ++ SGEI I
Sbjct: 1 MVEVRNVSKQYGGKVVLEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRLIKKDSGEIYI 60
Query: 60 NGEV-----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+G+ SK+ KK++ ++Q + I+ + +K+ VS G + + +L ++W +
Sbjct: 61 DGQEIGACDSKELAKKMSILKQANQIN--IRLTIKDLVSFGRFPYSQ--GRLTEEDWVHI 116
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
++AL + L D +++ + +LSGGQ QR +A + Q+ DYIFLDEP +D IM
Sbjct: 117 NQALSYMKLEDIQDKYLDQLSGGQCQRAFIAMVIAQDTDYIFLDEPLNNLDMKHSVEIMK 176
Query: 175 ILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAY 229
+L+ L + GKTI+IV HD++ Y D I+ L N ++ GP E L++ Y
Sbjct: 177 LLKRLVEELGKTIVIVIHDINFASVYSDYIVALKNGRIVKEGPPEEMIETSVLEEIY 233
dbj|BAA22247| (AB000617) YcdI [Bacillus subtilis] >gi|2632572|emb|CAB12080|
(Z99105) similar to ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 231
Score = 131 bits (326), Expect = 6e-30
Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 3/211 (1%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+++ K++ Y+ VL + L++ G GI GPNGA KSTLIK +L ++ P G + I
Sbjct: 3 LVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKVMLGMLKPWEGTVTI 62
Query: 60 NGEVSKKQLKKIAYVEQK-SDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
+ ++ + I YV Q+ S + FP V E V G YT K F++L ++ V +AL
Sbjct: 63 SKRNTEGKRLTIGYVPQQISSFNAGFPSTVLELVQSGRYTKGKWFKRLNEEDHLEVEKAL 122
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ V + D +R+IG+LSGGQ Q++ +AR L D + LDEP +D S K + +
Sbjct: 123 KMVEMWDLRHRKIGDLSGGQKQKICIARMLASNPDLLMLDEPTTAVDYDSRKGFYEFMHH 182
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIILNR 208
L K+ +T+++V H+ ++V+++ D +I L R
Sbjct: 183 LVKNHNRTVVMVTHEQNEVQQFLDKVIRLER 213
gb|AAD33527.1|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]
Length = 244
Score = 130 bits (324), Expect = 1e-29
Identities = 77/242 (31%), Positives = 139/242 (56%), Gaps = 10/242 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
++ + + + Y +N ++ + +E+ G++T IIGPNG GKSTL+KA+ ++ GE+ ++
Sbjct: 4 LHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKSTLLKALSRLLAVKEGEVFLD 63
Query: 61 GE-----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
GE +K+ KKIA + Q ++ + V E VS G + K F +L A++ +
Sbjct: 64 GENIHTQSTKEIAKKIAILPQSPEVADG--LTVGELVSYGRFPHQKGFGRLTAEDKKEID 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
A++ + +R I +LSGGQ QRV +A L Q D IFLDEP +D + I+++
Sbjct: 122 WAMEVTRTDTFRHRSINDLSGGQRQRVWIAMALAQRTDIIFLDEPTTYLDICHQLEILEL 181
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNI 233
+Q L + QG TI++V HD+++ + D +I + ++IA G + +Q+ L+K + ++
Sbjct: 182 VQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDIIATGSTEDVLTQEILEKVFNIDV 241
Query: 234 FI 235
+
Sbjct: 242 VL 243
emb|CAB72626.1| (AL139074) ABC transporter ATP-binding protein [Campylobacter
jejuni]
Length = 284
Score = 129 bits (322), Expect = 2e-29
Identities = 83/224 (37%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGEVSK 65
NLN Y+ +LK+I L IIGPNGAGKSTL+K IL ++ EI
Sbjct: 8 NLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKSTLVKLILGLLKSKNEI----HFKA 63
Query: 66 KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLD 125
Q K+I YV Q + + F +V E V +G + K+F G K+ + +AL+ V +
Sbjct: 64 LQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSK-KIFGFYGKKDKEKAMQALKSVGMEK 122
Query: 126 YENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKT 185
+ N+ I LSGGQ QRV +AR L E + LDEP +D+ S I ++L L +G
Sbjct: 123 FWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTASVDNKSAIQIFELLISLHQKGMG 182
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
IL++ HD++ V Y D I LN+EL + E LK Y
Sbjct: 183 ILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEKSSFLKHLY 226
emb|CAB73781.1| (AL139078) enterochelin uptake ATP-binding protein [Campylobacter
jejuni]
Length = 251
Score = 129 bits (320), Expect = 3e-29
Identities = 83/241 (34%), Positives = 142/241 (58%), Gaps = 12/241 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI KN+ FY+ ++ D+ L+ G+IT IIG NGAGKSTL+ ++ P SGEI I
Sbjct: 1 MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLLALASRLIKPSSGEIYI 60
Query: 60 NG---EVSKKQL--KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+G + K+Q+ +KI+ ++Q+++I+ +KV+E V+ G + + +L + ++
Sbjct: 61 DGMNLKNYKEQILAQKISILKQQNNIN--LRLKVEELVAFGRFPHSQ--GRLNTNDKIKI 116
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+EAL+ + L + N + LSGGQ QR +A + Q+ ++I DEP +D IM
Sbjct: 117 NEALEYMELSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFDEPLNNLDMKHSVQIMQ 176
Query: 175 ILQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDN 232
++++L K K+I +V HD++ Y D+II L + +L+ G +E +Q+NLK+ Y +
Sbjct: 177 LMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQGSKDEIINQENLKQIYDMD 236
Query: 233 I 233
I
Sbjct: 237 I 237
sp|P15031|FECE_ECOLI IRON(III) DICITRATE TRANSPORT ATP-BINDING PROTEIN FECE
>gi|72451|pir||QRECM3 membrane-bound iron(III) dicitrate
transport protein - Escherichia coli >gi|145928 (M26397)
fecE [Escherichia coli] >gi|537128 (U14003) fecE gene
product [Escherichia coli] >gi|1790739 (AE000499)
ATP-binding component of citrate-dependent iron(III)
transport protein [Escherichia coli]
Length = 255
Score = 128 bits (318), Expect = 5e-29
Identities = 79/226 (34%), Positives = 128/226 (55%), Gaps = 13/226 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ T+NL V Y +KVL D+ L + G+IT +IGPNG GKSTL+ ++ P SG + +
Sbjct: 3 LRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLG 62
Query: 61 GE----VSKKQL-KKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+S +QL ++++ + Q H P I V+E VS G L L+ +L A++ +R
Sbjct: 63 DNPINMLSSRQLARRLSLLPQH----HLTPEGITVQELVSYGRNPWLSLWGRLSAEDNAR 118
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
V+ A+ + + R++ ELSGGQ QR LA L Q + LDEP +D + +M
Sbjct: 119 VNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVLLDEPTTYLDINHQVDLM 178
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINE 218
++ +L+ QGKT++ V HDL++ Y D ++++ N ++A G E
Sbjct: 179 RLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEE 224
gi|2983231 (AE000698) ABC transporter [Aquifex aeolicus]
Length = 232
Score = 125 bits (310), Expect = 4e-28
Identities = 83/219 (37%), Positives = 124/219 (55%), Gaps = 17/219 (7%)
Query: 1 MINTKNLNVFYN-ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
+I KNL Y+ ++ VL+D+ V G GI+GPNGAGKSTL+K IL + P SGEI
Sbjct: 3 VIEVKNLTFSYDGKHNVLEDVSFYVEKGDFLGIVGPNGAGKSTLLKLILGFLKPKSGEIY 62
Query: 59 INGEVSK--KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
+ G+ + K K++ YV Q+ ++H FP VKE +S KE + E
Sbjct: 63 LFGKKIEEFKDWKRVGYVPQRLSVEHAFPGTVKELLSSVCED---------KKEIDYLVE 113
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L+ N++ N+Q +LSGGQ QRVLLA L + I LDEP VG+D + M IL
Sbjct: 114 FLKLKNIV---NKQFTKLSGGQQQRVLLAMALSYNPELILLDEPTVGLDVHAINHFMSIL 170
Query: 177 QDLK-HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYG 214
DL + K+I+++ HD+ + ++ I+ LN+++ +G
Sbjct: 171 LDLNMNHKKSIVMISHDIGTLLKHASKILCLNKKVCYFG 209
emb|CAA06499| (AJ005352) ATP binding protein [Staphylococcus aureus]
Length = 253
Score = 123 bits (307), Expect = 1e-27
Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 11/232 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILI 59
MI NL N +L+DI +++ G++T +IGPNGAGKSTL+ AI ++ +GE+ I
Sbjct: 1 MIQVGNLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFDNGEVKI 60
Query: 60 NGEV-----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+G + + KKI+ ++Q + + I V++ V+ G + K +L ++ V
Sbjct: 61 DGRLMSDYKNNDLSKKISILKQTNHTEMN--ITVEQLVNCGRFPYSK--GRLTKEDHDIV 116
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
++AL + L D NR I LSGGQ QR +A + Q+ +YI LDEP +D IM
Sbjct: 117 NDALDLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQ 176
Query: 175 ILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNL 225
L+ L H+ K I+IV HD++ Y D I+ L + + +N Q N+
Sbjct: 177 TLKMLAHKMNKAIVIVSHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSNV 228
dbj|BAA30335| (AP000005) 250aa long hypothetical ferrichrome transport
ATP-binding protein [Pyrococcus horikoshii]
Length = 250
Score = 123 bits (305), Expect = 2e-27
Identities = 83/239 (34%), Positives = 131/239 (54%), Gaps = 14/239 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILING 61
I +NL +N ++L DI E+ G I+GPNGAGK+TL++ I I+ + G I + G
Sbjct: 4 IEVENLKFSHNGREILHDINFEIDKGSFLIILGPNGAGKTTLLRCIAGILKYKGSIKVLG 63
Query: 62 ----EVSKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGT--YTGLKLFQKLGAKEWSRV 114
E+S+ +L K+ AYV Q+ I+ F ++V + V LG Y GL G K+ V
Sbjct: 64 NDIKELSRIELAKLLAYVPQR--IEPGF-LRVFDFVLLGRKPYMGLNP----GRKDLKAV 116
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+AL+ + + E+R + LSGG+ Q+V +AR + QE I LDEP +D S+ +M+
Sbjct: 117 EDALRLLGIQRLEDRIMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIEVME 176
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
I++DL +GKT++ V HDL+ + ++ + L E +K L + YG I
Sbjct: 177 IIKDLVKRGKTVVTVMHDLTLALRFGEEFLFLKDGRSTGLLTREELEEKILSETYGVKI 235
sp|P44692|ZNUC_HAEIN HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING PROTEIN ZNUC
>gi|1074963|pir||B64066 leucine-specific transport
protein (livG) homolog - Haemophilus influenzae (strain
Rd KW20) >gi|1573381 (U32724) ABC transporter,
ATP-binding protein (yebM) [Haemophilus influenzae Rd]
Length = 268
Score = 122 bits (304), Expect = 2e-27
Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 19/235 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
+I KN+NV + + L+DI L + P I I+GPNG GKSTL+K +L + P SGE++
Sbjct: 15 LIQLKNINVVFAQKTALQDINLNIYPNSIITIVGPNGGGKSTLLKTLLKLQTPTSGEVIY 74
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+ V +I YV QK +DH+ PI V+ +SL K G K +S AL+
Sbjct: 75 SKNV------RIGYVPQKIHLDHSLPITVERFLSL----------KKGIKT-QEISTALE 117
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
++++ + +LSGG+ QRVLLAR ++ + + + LDEP G+D + + ++
Sbjct: 118 QLSISHLRKNNMQKLSGGEMQRVLLARAILNKPNLLVLDEPTQGVDITGQAELYQLIHQT 177
Query: 180 KHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+ + +L+V HDL V +++ +N+ + G + + + +G+ I
Sbjct: 178 QQKLNCAVLMVSHDLHIVMADSKEVLCINQHICCAGTPDVLSNDPTFMRLWGNQI 232
emb|CAB73604.1| (AL139079) putative haemin uptake system ATP-binding protein
[Campylobacter jejuni]
Length = 258
Score = 121 bits (301), Expect = 5e-27
Identities = 82/241 (34%), Positives = 135/241 (55%), Gaps = 11/241 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEI-L 58
M+ NL+ Y++ +LK+I LE+ GI+GPNG+GKSTL+K IL N+ P+ G I L
Sbjct: 1 MLKIHNLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLLKLILKNLSPNKGVISL 60
Query: 59 INGEVSKKQLKKIA----YVEQKSDIDHTFPIKVKECVSLGTYTGLK-LFQKLGAKEWSR 113
N + LK+ A +V QKS+++ P+KV + + + Y LK F ++
Sbjct: 61 FNTNIKDFSLKEFAKICGFVPQKSELN--TPLKVIDVLLMSKYPNLKHAFSSYSKEDILE 118
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ E + + L ++ R I LSGG+FQR+LLAR L+++ +FLDEP +D ++
Sbjct: 119 IKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKILFLDEPTSALDLNYAIELL 178
Query: 174 DILQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGD 231
++ + L K + ++ + HDL+ + D I+ L E+ +G E F+Q+ LK+ Y
Sbjct: 179 NLCEKLVKEKNIAVVAILHDLNLASIFCDKILFLKEGEIKYFGTSKELFTQEILKEIYDL 238
Query: 232 N 232
N
Sbjct: 239 N 239
emb|CAA96186| (Z71552) AdcC protein [Streptococcus pneumoniae]
Length = 234
Score = 118 bits (294), Expect = 3e-26
Identities = 70/210 (33%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I ++L+ +Y++ VL+ I V G + G NGA K+TLIKA L I+ P G++ I+
Sbjct: 4 ITVEDLSFYYDKEPVLEHINYCVDSGEFVTLTGENGAAKTTLIKASLGILQPRIGKVAIS 63
Query: 61 GEVSKKQLKKIAYVEQK-SDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
++ + +IAY+ Q+ + + FP V E V G Y F++L A + + +L
Sbjct: 64 KTNTQGKKLRIAYLPQQIASFNAGFPSTVYEFVKSGRYPRKGWFRRLNAHDEEHIKASLD 123
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL-QD 178
V + ++ ++++G LSGGQ QR ++AR + D LDEP G+D+ S+ +++
Sbjct: 124 SVGMWEHRDKRLGSLSGGQKQRAVIARMFASDPDVFILDEPTTGMDAGSKNEFYELMHHS 183
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNR 208
H GK +L++ HD +VK+Y D I L R
Sbjct: 184 AHHHGKAVLMITHDPEEVKDYADRNIHLVR 213
sp|P52648|ZNUC_ECOLI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING PROTEIN ZNUC
>gi|1736501|dbj|BAA15666| (D90828) Sulfate transport
ATP-binding protein CysA. [Escherichia coli] >gi|1788165
(AE000280) putative ATP-binding component of a transport
system [Escherichia coli]
Length = 251
Score = 118 bits (294), Expect = 3e-26
Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 23/218 (10%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+++ +N++V + + +VL D+ LE+ PG+I ++GPNGAGKSTL++ +L +V P G I
Sbjct: 4 LVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKR 63
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSL--GTYTGLKLFQKLGAKEWSRVSEA 117
NG++ +I YV QK +D T P+ V + L GT+ + A
Sbjct: 64 NGKL------RIGYVPQKLYLDTTLPLTVNRFLRLRPGTHK-------------EDILPA 104
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L++V N + +LSGG+ QRVLLAR L+ + LDEP G+D + + D++
Sbjct: 105 LKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLID 164
Query: 178 DLKHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYG 214
L+ + +L+V HDL V D+++ LN + G
Sbjct: 165 QLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSG 202
gb|AAD18682| (AE001639) ABC Transporter ATPase [Chlamydia pneumoniae]
Length = 245
Score = 118 bits (293), Expect = 4e-26
Identities = 74/198 (37%), Positives = 103/198 (51%), Gaps = 4/198 (2%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI--NGEVSKKQLKKIA 72
++ D+ V G GIIGPNG GKSTL IL ++ P G + + K+ I
Sbjct: 21 IIHDVSFSVYDGDFIGIIGPNGGGKSTLTMLILGLLTPTFGSLKTFPSHSAGKQTHSMIG 80
Query: 73 YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQIG 132
+V Q D FPI VK+ V G + L K K++ V AL V L D+ +
Sbjct: 81 WVPQHFSYDPCFPISVKDVVLSGRLSQLSWHGKYKKKDFEAVDHALDLVGLSDHHHHCFA 140
Query: 133 ELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHD 192
LSGGQ QRVLLAR L + + LDEP ID +++ I+ IL+ L ++ TIL+V HD
Sbjct: 141 HLSGGQIQRVLLARALASYPEILILDEPTTNIDPDNQQRILSILKKL-NRTCTILMVTHD 199
Query: 193 LSKVKEYFDDIIILNREL 210
L YF+ + +N+ L
Sbjct: 200 LHHTTNYFNKVFYMNKTL 217
dbj|BAA30765| (AP000006) 260aa long hypothetical ABC transporter [Pyrococcus
horikoshii]
Length = 260
Score = 118 bits (292), Expect = 6e-26
Identities = 68/239 (28%), Positives = 128/239 (53%), Gaps = 15/239 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
+I K+L + YN ++D+ ++ G ++GPNGAGK+TL++ + + G + +
Sbjct: 4 VIEAKDLTIMYNGVNAVEDLTFKLKRGETLLLLGPNGAGKTTLLRVLAGFHTEYKGYLKV 63
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G+ + ++AYV Q I+ P+ V + V++G K G ++ E ++
Sbjct: 64 FGKSPLEVKDRVAYVPQTFSINSRVPLSVLDVVAMGA------IYKRGIVHFNVPREVIK 117
Query: 120 K-------VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
K + L D +R ELSGGQ QRV++AR L+ E + + LDEP +D + +
Sbjct: 118 KGIKVLEFLGLKDLSSRSFRELSGGQKQRVIIARALMSEPELLLLDEPLSALDPKARLEV 177
Query: 173 MDILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+L +K + G +++I HD++ + E D ++++N++L+A+G +E + + K YG
Sbjct: 178 TSVLSRIKEKFGISMIITTHDINPLAEIGDKVMLINKKLVAFGTPDEVLRDEIIGKVYG 236
dbj|BAA29884| (AP000003) 241aa long hypothetical iron (III) dicitrate transport
ATP-binding protein [Pyrococcus horikoshii]
Length = 241
Score = 117 bits (290), Expect = 1e-25
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 19/230 (8%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGE--- 62
+++ Y + L+D++ + G + IIGPNG+GKSTL+K I I+ G+I+ +G
Sbjct: 10 DISFSYGNFEALRDVKFKAKKGELLAIIGPNGSGKSTLLKCIAGILKPRGKIVYDGINLL 69
Query: 63 --VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
K++ K ++YV Q S +F V+E V LGTY + +AL++
Sbjct: 70 NLKPKERAKIVSYVPQSSFPQFSFT--VEEFVELGTYA-----------RGGDIEDALKR 116
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V L++ + I LSGG++Q L+AR L Q ++ + LDEP +D K +++ILQ+LK
Sbjct: 117 VGLVEKRHELITRLSGGEYQLALIARALAQGSEVMLLDEPTSHLDINHTKKVIEILQELK 176
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ K I+ V HDL+ Y D++++L +A+ + + + K YG
Sbjct: 177 KE-KLIIAVFHDLNLAINYSDELLVLKNGEVAWLGDPNSLPLEVIGKVYG 225
sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0089
>gi|2127897|pir||A64311 ferric enterobactin transport
ATP-binding protein homolog - Methanococcus jannaschii
>gi|1498853 (U67466) ferric enterobactin transport
ATP-binding protein [Methanococcus jannaschii]
Length = 254
Score = 117 bits (290), Expect = 1e-25
Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 12/242 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+++ + Y ++L +I+ EV G + I+G NGAGKSTL+K I I+ P G ILI
Sbjct: 5 ILSVDGVEFAYKSRQILNNIKFEVKRGEVVSILGVNGAGKSTLLKCINKILKPKRGTILI 64
Query: 60 NGEVSK-----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+ K + KK+ YV Q+++ ++ + V + V LG +K ++ ++
Sbjct: 65 DNFDIKNLDNLELAKKVGYVPQRAEGNY---MTVFDAVLLGRKPHIKW--EVSDRDIEIT 119
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+ L+ +NL DY R ELSGG+ Q+V++AR LVQE + LDEP +D ++ +M
Sbjct: 120 HKVLKLLNLEDYALRYTNELSGGELQKVIIARALVQEPQILLLDEPTNNLDLKNQLEVMK 179
Query: 175 ILQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
I+ D+ K Q ++V HDL+ Y D I+L +I E + +N+K YG +
Sbjct: 180 IIMDISKSQNIASIVVMHDLNLALRYSDKFIMLKDGVIYAEGGREVINPENIKAVYGVDA 239
Query: 234 FI 235
+I
Sbjct: 240 YI 241
emb|CAB49438.1| (AJ248284) ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 116 bits (288), Expect = 2e-25
Identities = 68/233 (29%), Positives = 125/233 (53%), Gaps = 3/233 (1%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
+I +NL + Y+ K ++ + ++ G ++GPNGAGK+TL++ + + + G+IL+
Sbjct: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLG-TYTGLKLFQKLGAKEWSRVSEAL 118
G+ + +K+AYV Q ++ P+ V + VS+G Y + + + R E L
Sbjct: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ L + + ELSGGQ QRV++AR L+ + + LDEP +D + L
Sbjct: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
Query: 179 LKH-QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+K G T++I HD++ + E D +++++R+L+A+G E + + K YG
Sbjct: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
gb|AAC68013.1| (AE001315) ABC Transporter ATPase [Chlamydia trachomatis]
Length = 236
Score = 116 bits (288), Expect = 2e-25
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAYV 74
++ + EV G GIIGPNG GK+TL + +L ++ P G I + L I +V
Sbjct: 21 IVDHVSCEVYSGDFIGIIGPNGGGKTTLTQLMLGLLQPVCGSISTYSVQDHRPLS-IGWV 79
Query: 75 EQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQIGEL 134
Q D FPI VKE V G L + + ++ EAL V+L+DY++ L
Sbjct: 80 PQHFSYDAAFPITVKETVLSGRLATLPWYGRYTQEDHEAAEEALLTVDLIDYKDSCFSHL 139
Query: 135 SGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHDLS 194
SGGQ QRVLLAR L +++ LDEP ID ++++ I+ IL L ++ TIL++ HDL
Sbjct: 140 SGGQIQRVLLARALAARPEFLLLDEPTANIDPVNQQKILQILSAL-NKHCTILMITHDLH 198
Query: 195 KVKEYFDDIIILNREL 210
F+ + +N+ L
Sbjct: 199 HTAGCFNRVFFMNKTL 214
gb|AAF12553.1|AE001826_22 (AE001826) iron ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 269
Score = 115 bits (286), Expect = 3e-25
Identities = 73/237 (30%), Positives = 128/237 (53%), Gaps = 10/237 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
++T +L + Y ++ ++ D+ L + G++T IIGPNG GKSTL++A+ ++P +G I +
Sbjct: 7 LSTDHLRLGYGQSVIVSDMNLSIAGGKVTSIIGPNGCGKSTLLRALARLLPAQNGHIELY 66
Query: 61 GEV-----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G+ S+ +K+A + Q + V+E V G + F ++ + V+
Sbjct: 67 GQALHTLPSRAIAQKLAILPQGPSAPE--GLSVEELVWFGRHPHQGRFPVQREEDRAAVA 124
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
AL + + + R + LSGGQ QR +A L Q+ D + LDEP +D + ++ +
Sbjct: 125 WALDQTGMRVFAGRPLDSLSGGQRQRAWIAMSLAQQTDILLLDEPTTYLDPSHQLEVLQL 184
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
L + QGKT+++V HDL++ Y D+II L E+ A GP +E + + L +G
Sbjct: 185 AGRLNRDQGKTVVMVLHDLNQAVRYSDEIIALKGGEVYAQGPADEVLTHELLADVFG 241
emb|CAB50179.1| (AJ248287) iron (III) ABC transporter, ATP-binding protein (hemV-2)
[Pyrococcus abyssi]
Length = 238
Score = 115 bits (286), Expect = 3e-25
Identities = 82/232 (35%), Positives = 122/232 (52%), Gaps = 23/232 (9%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI------LI 59
N++ Y + +VLK+ + G + IIGPNG+GKSTL+K I I+ G I L+
Sbjct: 7 NVSFSYGDFEVLKNAEFSARKGELVSIIGPNGSGKSTLLKCIAGILKPRGRISYDDVDLV 66
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTY-TGLKLFQKLGAKEWSRVSEAL 118
N K++ K ++YV Q S + +F V+E V LGTY TG V EAL
Sbjct: 67 NLR-PKERAKIVSYVPQSSFPEFSFT--VEEFVELGTYATG------------GDVEEAL 111
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ V L I LSGG++Q L+AR L Q +D + LDEP +D K IMD+L
Sbjct: 112 RMVGLERKRKELITRLSGGEYQLALIARALAQGSDVMLLDEPTSHLDINHTKEIMDLLTR 171
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
LK + K I+ V HDL+ Y D I+I+ + ++ + + + +++ YG
Sbjct: 172 LKDE-KLIIAVLHDLNLALNYSDYIVIIKKGIVVWKGKTQELPLEVIEEVYG 222
gi|2622836 (AE000928) cobalt transport ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 311
Score = 115 bits (284), Expect = 5e-25
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 21/238 (8%)
Query: 1 MINTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
MI ++L+ Y + L+ I ++V G +IGPNGAGKSTL + I+ P +GE++
Sbjct: 1 MIELRDLSYSYPDGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAAGEVI 60
Query: 59 INGE---VSKKQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE- 110
I+GE SK +L +K+ V Q D D F V+E V+ G LG E
Sbjct: 61 IDGERVDYSKDELIKIRQKVGIVFQNPD-DQLFSPTVREDVAFGP-------MNLGLPED 112
Query: 111 --WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
RV+E+L+KV + YENR LSGG+ +RV +A L + + + LDEP G+D +
Sbjct: 113 EVEERVAESLEKVGMSGYENRAPHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPET 172
Query: 169 EKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNL 225
I+ IL +L +G T++I HD+ + ++ + + +LN ELIA G E F L
Sbjct: 173 ADGIIRILLELSREGITVMISSHDVEIISQFAERVFVLNSGELIAEGTPLEIFRDAEL 230
pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732 (U67551) cobalt transport
ATP-binding protein (cbiO) [Methanococcus jannaschii]
Length = 279
Score = 114 bits (283), Expect = 6e-25
Identities = 88/239 (36%), Positives = 127/239 (52%), Gaps = 16/239 (6%)
Query: 1 MINTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
++ TK+L Y + VLK I +V G + ++GPNGAGKSTL I+ P GE+L
Sbjct: 3 IVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGEVL 62
Query: 59 INGE---VSKKQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW 111
I G+ KK L K + V Q D D F VKE V+ G L L ++ K
Sbjct: 63 IKGKPIKYDKKSLVEVRKTVGLVFQNPD-DQIFAPTVKEDVAFGPLN-LGLPKEEVEK-- 118
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
RV EAL+ V + +EN+ LSGGQ +RV +A L + + I LDEP G+D +
Sbjct: 119 -RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASK 177
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQ-KNLKKA 228
IM +L DL +G TI+I HD+ V Y D + ++ + +++ G E FS + ++KA
Sbjct: 178 IMKLLYDLNKKGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEVFSDVETIRKA 236
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter ATP-binding protein
[Zymomonas mobilis]
Length = 261
Score = 114 bits (282), Expect = 8e-25
Identities = 77/236 (32%), Positives = 121/236 (50%), Gaps = 9/236 (3%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
++ +NL + +L DI L G +T ++G NGAGKSTL++ +L ++P G I +
Sbjct: 14 LLQARNLRYRRQKTVILDDISLSFHQGELTALLGINGAGKSTLLRLLLGLMPPDEGNIFL 73
Query: 60 NGE----VSKKQLKK-IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+ +S+K + + IAYV Q+ FP V+E VSLG + Q L + V
Sbjct: 74 QNKPLKAISRKTIARHIAYVPQEHKA--IFPYTVEEVVSLGRLPYIAFGQNLSLSDKQAV 131
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+AL +N+ R ELSGG+ Q VLLAR L Q A + LDEP G+D + +
Sbjct: 132 RQALDYLNIASLSARPYTELSGGERQSVLLARALAQGAPILVLDEPETGLDFGQQLRLAV 191
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
+LQ L +G I+ HD + ++ F I+L + +IA G ++ ++ Y
Sbjct: 192 LLQKLADEGYCIVATTHDPLRARQIFSRAILLQQGRIIADGAPKSVLTRSAIEALY 247
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1023
>gi|2127730|pir||F64427 ABC transporter ATP-binding
protein - Methanococcus jannaschii >gi|1499865 (U67545)
ABC transporter ATP-binding protein [Methanococcus
jannaschii]
Length = 262
Score = 113 bits (281), Expect = 1e-24
Identities = 69/237 (29%), Positives = 126/237 (53%), Gaps = 25/237 (10%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
I +NL ++ + KVL +I EV G I G++G NGAGK+T ++ + I+ ++G + +N
Sbjct: 5 IKVENLTKYFGDKKVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAGIIEEYTGYVEVN 64
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA--- 117
G++ ++ Y ++K LK F +L + ++++
Sbjct: 65 GKIGYLPEERGLYRDEK------------------VVDVLKFFGELAGMKKEEIAKSIDY 106
Query: 118 -LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L K+ + +Y+ +I ELS G Q+V ++ D + LDEPF G+D ++ +++ DI+
Sbjct: 107 WLNKLKISNYKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDII 166
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDN 232
+LK +GKTI++ H L K++ D ++IL + + + YG I E+ +K Y DN
Sbjct: 167 FELKEEGKTIILSTHQLEKIERLCDRVLILKKGKAVHYGKI-EDICRKMAYIEYLDN 222
sp|P49938|FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROTEIN FHUC
>gi|1070015|emb|CAA63645| (X93092) protein-dependent
[Bacillus subtilis] >gi|2635843|emb|CAB15335| (Z99121)
ferrichrome ABC transporter (ATP-binding protein)
[Bacillus subtilis] >gi|2832798|emb|CAA11722.1|
(AJ223978) ferrichrome transport protein, FhuC [Bacillus
subtilis]
Length = 269
Score = 113 bits (281), Expect = 1e-24
Identities = 74/236 (31%), Positives = 125/236 (52%), Gaps = 10/236 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
++T+ L + Y + +++D+ + + G+IT +IGPNG GKST++K + I+ H+G + +N
Sbjct: 4 LSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMSRIMRSHAGAVYLN 63
Query: 61 GEVSKKQ-----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G+ K K +A + Q + + V E VS G + F +L ++ +
Sbjct: 64 GKAIHKMSTKDIAKDMAILPQTPEAPSG--LTVHELVSYGRFPHQSGFGRLNDEDRRIIK 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
AL++ + +Y R I LSGGQ QRV +A L Q + + LDEP +D + I+ +
Sbjct: 122 WALEETGMAEYAERPIEALSGGQRQRVWIAMALAQGTELLLLDEPTTYLDLAHQLEILQL 181
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
L L K QG+TIL+V HDL+ + +I L + +I G E + LK+ +
Sbjct: 182 LDRLNKEQGRTILMVIHDLNHAARFSHYMIALKKGTVIKEGTALEVMTPDILKQVF 237
sp|Q47087|CBRD_ERWCH ACHROMOBACTIN TRANSPORT ATP-BINDING PROTEIN CBRD
>gi|1073286|pir||S54823 CbrD protein - Erwinia
chrysanthemi >gi|809544|emb|CAA60669| (X87208) CbrD
protein [Erwinia chrysanthemi]
Length = 273
Score = 113 bits (280), Expect = 1e-24
Identities = 72/236 (30%), Positives = 129/236 (54%), Gaps = 10/236 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I ++ L + Y ++ ++ +++ G+++ +IG NG+GKSTL+K+ ++ P G +++N
Sbjct: 4 ITSRELTLGYASQTIIDNLDIQLPEGKVSVLIGSNGSGKSTLLKSFARLLKPLKGAVILN 63
Query: 61 GEVSKKQ-----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
GE +Q +++A + Q D I VK+ VSLG Y Q+ ++ + V+
Sbjct: 64 GEDIHRQSTAAVARELAILPQMPDAPEG--ITVKQLVSLGRYPYQNWLQQWSEQDEAMVN 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
+AL++ R + LSGGQ QRV +A L Q+ + + LDEP +D + ++D+
Sbjct: 122 QALRQTGTDMLAERPVDALSGGQRQRVWIAMTLGQDTEVVLLDEPTTFLDLAHQIEVLDL 181
Query: 176 LQDLKHQ-GKTILIVHHDLSKVKEYFDDII-ILNRELIAYGPINENFSQKNLKKAY 229
L++L Q GKTI++V HDL+ Y D ++ + NR A G E + +K +
Sbjct: 182 LRELNRQHGKTIIMVLHDLNLACRYGDHMVAVHNRTAFAQGAPAEILDEALVKTVF 237
emb|CAB56736.1| (AL121600) ABC transport protein, ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 252
Score = 113 bits (279), Expect = 2e-24
Identities = 62/188 (32%), Positives = 106/188 (55%), Gaps = 7/188 (3%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLK 69
Y VL+ + E+ +T ++GPNG+GKSTL+ + ++ P SG++ +GE +
Sbjct: 31 YPGRPVLRQLTCEIPALAVTALVGPNGSGKSTLLGVLAGVIRPTSGDLHRDGE------R 84
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENR 129
A+V Q+ + P+ V++ V +G + +++L ++ V AL ++ + D R
Sbjct: 85 PPAFVPQRGAVADALPLTVRQTVEMGRWAERGPWRRLNRRDRLIVDSALDRLGIADLAPR 144
Query: 130 QIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
Q+GELSGGQ QR L+A+ L Q++D + LDEP G+D + + I +L DL G T++
Sbjct: 145 QLGELSGGQRQRALVAQGLAQQSDLLLLDEPTTGLDPEARQRITALLTDLVADGVTVVHA 204
Query: 190 HHDLSKVK 197
HDL +
Sbjct: 205 THDLEAAR 212
gi|2650201 (AE001075) iron (III) ABC transporter, ATP-binding protein (hemV-1)
[Archaeoglobus fulgidus]
Length = 248
Score = 113 bits (279), Expect = 2e-24
Identities = 75/239 (31%), Positives = 129/239 (53%), Gaps = 17/239 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI ++L YN V++D++ E G I+GPNG+GK+TL+K + I+ G +L+
Sbjct: 1 MIEVRSLYYSYNSKPVIQDLEFEAERGEFVFILGPNGSGKTTLLKCMAGILKPKGAVLVE 60
Query: 61 GEVSKKQL------KKIAYVEQKSDIDHTFPIKVKECVSLG--TYTGLKLFQKLGAKEWS 112
+VS +L +K+AYV Q+SD + V + V LG Y G +++
Sbjct: 61 -KVSIDRLSGRDLARKLAYVPQRSDSGF---LTVYDVVLLGRRPYMGF----SPSDEDYR 112
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
V + L ++L + R+I ELSGG+ Q+V++AR L Q+ + LDEP +D ++ I
Sbjct: 113 IVEDVLSLLDLKKFSYRRINELSGGELQKVMIARALAQKPKILLLDEPTNNLDVKNQIEI 172
Query: 173 MDILQDLKHQGK-TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
M +L+ + + + +++ HDL+ + D I++L I E +Q+N+K+ YG
Sbjct: 173 MKLLRKIADEKEISVISTMHDLNLAAIFADKIVMLKNGRIFASGGKEVLTQENIKEVYG 231
emb|CAB49920.1| (AJ248286) iron (III) ABC transporter, ATP-binding protein (hemV-1)
[Pyrococcus abyssi]
Length = 257
Score = 112 bits (277), Expect = 3e-24
Identities = 72/238 (30%), Positives = 129/238 (53%), Gaps = 10/238 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
+I NL YN VL+ + +V G I+GPNGAGK+TL++ I I+ G++ +
Sbjct: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
Query: 61 G----EVSKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G ++++ +L K+ AYV Q+ ++ F ++V + V LG + L + ++ V
Sbjct: 67 GKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVR 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
AL+ + + ++E+R + LSGG+ Q+V +AR + QE I LDEP +D S+ +M I
Sbjct: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
++DL +GKT++ V HDL+ + + + L + + + L + YG ++
Sbjct: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
gi|2649168 (AE001007) iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus]
Length = 405
Score = 112 bits (277), Expect = 3e-24
Identities = 62/236 (26%), Positives = 133/236 (56%), Gaps = 8/236 (3%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV 63
K ++V +VLKD+ EV G + ++GPNG+GK+T+++ I ++ P G +L++G
Sbjct: 6 KGVSVKLGSREVLKDVTFEVGEGELLALLGPNGSGKTTMLRTIFGMLKPLKGVVLLDGRE 65
Query: 64 ---SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
+++ +K+ ++ Q + + + +KV + V LG L ++ +++ EAL++
Sbjct: 66 VGSAEEAARKLGFLPQDTPMTN---LKVIDVVMLGRTPYLSGLKRPKEEDYRAAMEALKE 122
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
V + +R ELSGG+ Q+V+LAR Q+ + + LDEP +D ++ IM+I++
Sbjct: 123 VGMEKMADRLFSELSGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIEIMEIVRSKV 182
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAY-GPINENFSQKNLKKAYGDNIFI 235
QGK ++ HD++ + I+++ ++ Y G + ++++++ +G ++ +
Sbjct: 183 EQGKAAIVAIHDINLASSFATKILMVKDGVVVYAGRPEDVITEESIRDVFGADVVV 238
dbj|BAA22320| (D86417) YfmF [Bacillus subtilis] >gi|2633073|emb|CAB12578|
(Z99108) similar to ferrichrome ABC transporter
(ATP-binding protein) [Bacillus subtilis]
Length = 266
Score = 112 bits (277), Expect = 3e-24
Identities = 67/232 (28%), Positives = 128/232 (54%), Gaps = 10/232 (4%)
Query: 7 LNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING---- 61
L + Y+ ++ + L++ G+IT +IG NG GKST++K++ ++ P SG +L+ G
Sbjct: 9 LTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLEGKDIH 68
Query: 62 -EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
+ SK+ KK+A + Q + V+E G + KL K ++ V AL+
Sbjct: 69 RQPSKEVAKKLAILPQSPQAPEG--LTVEELCYFGRHPHKKLLSKHTQEDHDMVEWALEA 126
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL- 179
+++ ++R + LSGGQ QR ++ L Q D + LDEP +D + ++++L+ L
Sbjct: 127 TGMIELKDRTLDALSGGQRQRAWISMALAQGTDLLLLDEPTTYLDISHQIEVLELLKKLN 186
Query: 180 KHQGKTILIVHHDLSKVKEYFDDII-ILNRELIAYGPINENFSQKNLKKAYG 230
+ G+T+++V HDL++ +Y D +I +L+ ++ G + F+Q ++ +G
Sbjct: 187 RDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDVFTQPFFREVFG 238
gb|AAD35172.1|AE001694_8 (AE001694) iron(III) ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 256
Score = 111 bits (275), Expect = 6e-24
Identities = 71/235 (30%), Positives = 125/235 (52%), Gaps = 7/235 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ +NL Y LK+I L V G GIIGPNG+GK+TL+K ++ I P G + +
Sbjct: 3 IVRIENLFFQYRGGFSLKNINLSVKKGEFFGIIGPNGSGKTTLLKILVGIFRPQKGTVQL 62
Query: 60 NG----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G E S+K++ KI + + D ++ VKE V +G L L K+ V
Sbjct: 63 LGRIPWETSRKEMAKIVTLVSQ-DFFPSYDFSVKEIVEMGRLPHLSLLSGTSRKDEEIVL 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
++L+ L + +R LS G+ ++V+L++ +VQ+ + + +DE +D + ++ ++
Sbjct: 122 KSLELTGTLKFVDRNFWTLSSGERRKVVLSKAIVQDTEILLIDELTAHLDYNNVSLVGNV 181
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKAY 229
L+ LK GKTI+ V HD++ D I ++ N E+I G E +++ L+ +
Sbjct: 182 LKRLKESGKTIISVFHDINVASALCDRIGVMKNGEMIKTGAPPEVVTEEVLRNTF 236
dbj|BAA16592| (D90899) iron(III) dicitrate transport system permease protein FecE
[Synechocystis sp.]
Length = 268
Score = 111 bits (275), Expect = 6e-24
Identities = 67/237 (28%), Positives = 128/237 (53%), Gaps = 10/237 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ T+ L++ Y+ + +++ + L + G IT ++GPNG GKSTL++ + ++ P G + +
Sbjct: 10 LTTRKLSLAYDSHLIIQGLDLAINQGEITTLVGPNGCGKSTLLRGMARLLKPQGGTVYLE 69
Query: 61 GEV-----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
GE +K+ K++ + Q + V+E V+ G Y Q+ ++ +V
Sbjct: 70 GEAIAHLPTKELAKRLGILPQSPPAPEG--LTVRELVAQGRYPHQNWLQQWSKQDELKVE 127
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
EA+ +L + NR + LSGGQ QR +A L Q+ + + LDEP +D + ++D+
Sbjct: 128 EAIATTDLHQFANRPLDSLSGGQRQRAWIAMALAQDTEILLLDEPTTYLDLAHQIEVLDL 187
Query: 176 LQDLKHQ-GKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
L L + G+TI++V HDL+ Y +I L + +L+A G +++ +++ +G
Sbjct: 188 LHWLNREAGRTIVMVLHDLNLACRYSHRLIALRDGKLLAQGRPQAIVTEELVRQVFG 244
gb|AAD53128.1|AF176902_3 (AF176902) IRP1D [Corynebacterium diphtheriae]
Length = 283
Score = 111 bits (274), Expect = 7e-24
Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 7/211 (3%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ +++L+ Y + ++KD+ L G+IT I+GPNG GKST ++ + ++ P +G + +N
Sbjct: 19 LTSRSLSSGYGVDPIVKDVTLSFESGKITSIVGPNGCGKSTFLRTLARLIRPTAGSVELN 78
Query: 61 GE----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G+ S ++L K + ++ ++ I V + V ++ + A ++ V+E
Sbjct: 79 GKPLGAYSSRELAKRLGLLPQTPVEPD-GITVADLVGEAARLTREILGRWTASDYDIVAE 137
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
A+ + + +R I ELSGGQ QRV +A L Q+ D + LDEP +D + ++D+L
Sbjct: 138 AMASTQVAELADRSIEELSGGQRQRVWIAMALAQQTDVLLLDEPTTYLDLKHQLEVLDLL 197
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIIL 206
DL + +G TI++V HDL+ Y D+++ +
Sbjct: 198 TDLNQRRGTTIIMVLHDLNLAARYSDNLVAM 228
gb|AAD48883.1| (U52150) ATPase [Vibrio cholerae]
Length = 279
Score = 109 bits (271), Expect = 2e-23
Identities = 70/237 (29%), Positives = 129/237 (53%), Gaps = 10/237 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ T+ L++ Y V + L + G+ + I+GPNG GKSTL+K++ ++ P +G++L++
Sbjct: 21 LKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPLAGQVLLD 80
Query: 61 GE-----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G+ +K K++ + Q + IKV + VS G Y LF++ + V
Sbjct: 81 GQNIHQLPTKVVAKQLGLLPQSALTPEG--IKVVDLVSRGRYPHQGLFRQWSRVDERAVE 138
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
EA++ ++ + + +LSGGQ QRV +A L Q+ Y+ LDEP +D + ++D+
Sbjct: 139 EAMRATHVHELAQHSVDQLSGGQRQRVWVAMGLAQQTPYLLLDEPTTYLDIAHQIELLDL 198
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYG 230
L + QG T++ V HDL++ Y D +I+L +++A G + + +K+ +G
Sbjct: 199 FWRLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKIVAQGDPHSLVTPALVKQVFG 255
dbj|BAA79499.1| (AP000059) 264aa long hypothetical ABC transporter ATP-binding
protein [Aeropyrum pernix]
Length = 264
Score = 109 bits (270), Expect = 2e-23
Identities = 74/241 (30%), Positives = 123/241 (50%), Gaps = 13/241 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ ++L V YN VL + LE + IIGPNGAGK+T +KAIL ++ P G + ++
Sbjct: 20 VRVEDLTVAYNGEPVLSGVNLEFRGPGLVQIIGPNGAGKTTFLKAILGLIKPARGRVFLD 79
Query: 61 GEVSKKQLKKI----AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G + + + + YV Q P+ V+E V T L+L A+E R E
Sbjct: 80 GFEATGRPEMVGRYAGYVPQNPSAPKLSPMTVREFVE----TSLRLRGVTRARE--RAVE 133
Query: 117 ALQKVNLL-DYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
L + + + ++ ELS G QRV +AR + + + +DEP +D I I
Sbjct: 134 VLHTLGIRGEVLESRLWELSMGMLQRVFIARAIAPDPKMLVMDEPLASVDPAGRMEIARI 193
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
+ L + + +L+ HD S + + D I+++NR+LIA GP E + + L++ YG+++
Sbjct: 194 IAGLARE-RLVLMTSHDPSLLLGHTDIIVVINRDLIASGPPEEVYREDVLRRVYGESVAR 252
Query: 236 G 236
G
Sbjct: 253 G 253
gi|2983089 (AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 109 bits (270), Expect = 2e-23
Identities = 67/237 (28%), Positives = 127/237 (53%), Gaps = 14/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
M+ + + + + KVLK L V G I G++GPNGAGK+TL +I+ + G++L+
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKGKVLL 60
Query: 60 NGE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+GE K+ K +A++ Q+ + + + L +T K + ++
Sbjct: 61 DGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFFTDSK------EEAITK 114
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
L+ LL+ ++++ LSGGQ +R+ +AR L+ Y+ LDEPF G+D I I
Sbjct: 115 AEALLEDFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVSEIR 174
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
+I+++LK+ G +LI H++ + + D + I++ +++A+G E + + ++K Y
Sbjct: 175 EIVKNLKNNGIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEVVNNEAVRKTY 231
emb|CAB69727.1| (AL137166) putative metal transport ABC transporter [Streptomyces
coelicolor A3(2)]
Length = 256
Score = 109 bits (269), Expect = 3e-23
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 5/229 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
+I+ + + VL+ I L V G++ ++G NG+GKST ++ I+ VP +GEI +
Sbjct: 6 VISLRGVRAELGSRPVLRGIDLTVRRGQVVALLGANGSGKSTAVRTIIGQVPVTAGEIEL 65
Query: 60 NGEVSKK--QLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
G ++ ++ YV Q++ P V E VS G + + F L + V A
Sbjct: 66 FGTPRRRFRDWARVGYVPQRTTAAGGVPATVTEVVSSGRLSRAR-FGVLRKADHEAVRRA 124
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L V + D + LSGGQ QRVL+AR L E + + +DEP G+D S++++ + L+
Sbjct: 125 LGLVGMADRAKDSVNALSGGQHQRVLIARALAAEPELLIMDEPMAGVDLASQEVLAETLR 184
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAY-GPINENFSQKNL 225
G T+L+V H+L ++ D ++L + + GP E Q L
Sbjct: 185 GQVAAGTTVLLVLHELGPLEPLIDRAVVLRDGCVLHDGPPPEAVGQHAL 233
dbj|BAA29201.1| (AP000001) 260aa long hypothetical transport protein [Pyrococcus
horikoshii]
Length = 260
Score = 108 bits (267), Expect = 5e-23
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 20/231 (8%)
Query: 1 MINTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
MI +++ +Y E K VLK I G + I+GPNG+GK+TL+K + ++ P G +L
Sbjct: 1 MIEFRDVWFWYQEGKTVLKSISFSFSEGTLA-IVGPNGSGKTTLVKMLNGLLKPKKGNVL 59
Query: 59 ING----EVSKKQLKKIA-YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS- 112
I+G EVS +L +I YV Q D F V + V+ G + LG E
Sbjct: 60 IDGINTKEVSVAELSRIVGYVFQNPDAMF-FEENVFKEVAFGP-------KNLGLNEEEV 111
Query: 113 --RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
RV AL+ V L +ENR ELSGG+ QR+ +A L + Y+ LDEP G+D +
Sbjct: 112 KKRVRWALEAVGLRGFENRNPFELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLQ 171
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENF 220
+++++++L+ +G +I++V HD+ V E D +++L + EL +G E F
Sbjct: 172 DLINVIKNLRREGSSIILVTHDIELVLEVADKVLLLKDGELKFFGSTKEFF 222
emb|CAB49694.1| (AJ248285) hypothetical protein [Pyrococcus abyssi]
Length = 305
Score = 107 bits (265), Expect = 8e-23
Identities = 74/236 (31%), Positives = 125/236 (52%), Gaps = 20/236 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I +NL Y + K + ++ LEV G I G +GPNGAGK+T I ++L I+ P SG + +
Sbjct: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
Query: 60 NG-EVSKKQLK---KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS-RV 114
G ++ K+ +K ++ ++ + + I +E + F + +E R+
Sbjct: 63 LGYDIFKEPIKAKERLGFLPENATI-------YEELTAWRNLDFFASFYNIPKQEKEKRI 115
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
E L+ V L D R++ S G QR+LLA+ L+ + + + LDEP G+D +++ D
Sbjct: 116 EELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKD 175
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKAY 229
I+ + K QGKT+ H LS+V+E D + II+ +L G + E +KK Y
Sbjct: 176 IILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEE------IKKQY 225
gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium diphtheriae]
Length = 277
Score = 107 bits (264), Expect = 1e-22
Identities = 69/239 (28%), Positives = 127/239 (52%), Gaps = 14/239 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEILI 59
++ ++L+V + ++L DI + G +TG+IGPNGAGKSTL+ A+ ++ SG I I
Sbjct: 6 LVRVRDLSVSVGQKRLLCDINFDAYAGEVTGLIGPNGAGKSTLLAALSGDLERQSGSIDI 65
Query: 60 NG----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS--R 113
G + S ++L ++ V D+ TF V++ V++G + ++ +E+
Sbjct: 66 CGLDPVDSSARELARVRSV-MLQDVSVTFQFLVRDVVAMGR----RPWEGTDRQEFDDRL 120
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ AL + R I LSGG+ RV L+R L Q+ + LDEP +D ++ ++
Sbjct: 121 IDAALSATDAAHLAGRDIVTLSGGERARVALSRVLAQQTPVVMLDEPTAALDISHQEQVL 180
Query: 174 DILQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
++Q + + G +++V HDL+ Y D I+ L + ++A G + + ++ + L YG
Sbjct: 181 GLMQSIARRTGIAVIVVLHDLNAAAAYCDHIVCLADGRIVADGSVADVYTDETLSSVYG 239
emb|CAB15306| (Z99120) similar to iron transport system [Bacillus subtilis]
>gi|2635829|emb|CAB15321| (Z99121) similar to iron
transport system [Bacillus subtilis]
>gi|2832813|emb|CAA11737.1| (AJ223978) putative metal
binding protein, YvrA [Bacillus subtilis]
Length = 442
Score = 107 bits (264), Expect = 1e-22
Identities = 69/215 (32%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
+ + L+ Y +++++ ++ L V G GI+GPNG+GK+TL+ + +P G + +
Sbjct: 1 MKAEGLSGGYGDSRLINNVSLTVEKGEFLGILGPNGSGKTTLLHLLTGTLPAKKGRVYLA 60
Query: 61 GEV----SKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGTY---TGLKLFQKLGAKEWS 112
G++ K+L +I A + QK +D F V+E V+ G Y TGL F++ K +
Sbjct: 61 GKLLADYKPKELAQIMAVLPQK--MDQAFTFTVEETVAFGRYPFQTGL--FRQQTEKGEA 116
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
V EA+++ + D+ + I ELSGG+ QRV LA+ L Q+ +FLDEP +D +K +
Sbjct: 117 IVQEAMEQTGVADFAQKPIRELSGGEQQRVYLAQALAQQPRILFLDEPTNFLDLAYQKDL 176
Query: 173 MDILQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL 206
+D+++ L + G + V HDL+ Y D ++ +
Sbjct: 177 LDLIKRLTRESGLAAVSVFHDLNTASLYCDGLMFM 211
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING PROTEIN FEPC >gi|1786803
(AE000164) ATP-binding component of ferric enterobactin
transport [Escherichia coli]
Length = 271
Score = 107 bits (264), Expect = 1e-22
Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGE- 62
+ L + Y + V +++ +E+ G T IIGPNG GKSTL++ + ++ P G + ++GE
Sbjct: 11 EQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEH 70
Query: 63 ----VSKKQLKKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
SK+ ++I + Q + T P I V+E V+ G Y LF + ++ V++
Sbjct: 71 IQHYASKEVARRIGLLAQNA----TTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTK 126
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
A+Q + ++ + LSGGQ QR +A L QE + LDEP +D + ++++L
Sbjct: 127 AMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELL 186
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNIF 234
+L + +G T+ V HDL++ Y +I L +++A G E + + +++ YG
Sbjct: 187 SELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERIYGLRCM 246
Query: 235 IGD 237
I D
Sbjct: 247 IID 249
gi|1778504 (U82598) ferric enterobactin transport ATP-binding protein
[Escherichia coli]
Length = 318
Score = 107 bits (264), Expect = 1e-22
Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGE- 62
+ L + Y + V +++ +E+ G T IIGPNG GKSTL++ + ++ P G + ++GE
Sbjct: 58 EQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEH 117
Query: 63 ----VSKKQLKKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
SK+ ++I + Q + T P I V+E V+ G Y LF + ++ V++
Sbjct: 118 IQHYASKEVARRIGLLAQNA----TTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTK 173
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
A+Q + ++ + LSGGQ QR +A L QE + LDEP +D + ++++L
Sbjct: 174 AMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELL 233
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNIF 234
+L + +G T+ V HDL++ Y +I L +++A G E + + +++ YG
Sbjct: 234 SELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERIYGLRCM 293
Query: 235 IGD 237
I D
Sbjct: 294 IID 296
emb|CAB53325.1| (AL109974) putative iron-siderophore ABC-transporter ATP-binding
protein [Streptomyces coelicolor A3(2)]
Length = 287
Score = 106 bits (263), Expect = 1e-22
Identities = 65/233 (27%), Positives = 120/233 (50%), Gaps = 9/233 (3%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV 63
+ + V Y V+ + + + PG IT IIGPNG GKSTL++ + ++ P G ++++GE
Sbjct: 22 RGVTVGYGTRSVIDGLDVAIPPGVITTIIGPNGCGKSTLLRTLSRLLRPTGGTVVLDGED 81
Query: 64 -----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
++ KK+ + Q + V + V+ G + ++ + + V +AL
Sbjct: 82 IAALRTRDVAKKLGLLPQAPVAPEG--LTVSDLVARGRHPHQSWLRQWSSDDADVVRQAL 139
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ D +R + LSGGQ QRV ++ L Q D + LDEP +D ++D++ D
Sbjct: 140 AMTGVSDLADRPVDSLSGGQRQRVWISMTLAQGTDLLLLDEPTTYLDLAHAVDVLDLVDD 199
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYG 230
L G+T+++V HDL+ Y D+++++ ++A G + + L +A+G
Sbjct: 200 LHESGRTVVMVLHDLNLAARYSDNLVVMREGAILAQGHPRDVITAGLLHEAFG 252
dbj|BAA80377.1| (AP000061) 316aa long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 106 bits (263), Expect = 1e-22
Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 13/223 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+N L+ + + ++++ G I G++GPNGAGK+TL+K IL +V P +GEIL+
Sbjct: 9 VNASALSKRFGQRYAYRNVEFTFTSG-ILGVLGPNGAGKTTLLKTILGLVKPSAGEILVE 67
Query: 61 GEVSK-----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G + K L +I YV + + P+ C+ L T L+ + + A+ R
Sbjct: 68 GVNPRSPGFEKLLPRIGYVPELPVV----PLWTTPCILLETLARLEGYTSVEARV--RAR 121
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
EAL+ V L IG+LS G +RVL+A+ + E + + LDEP+ G+D + ++
Sbjct: 122 EALEVVGLAGECETPIGKLSKGARKRVLVAQAFIGERELLVLDEPYSGLDPEWVYRVREL 181
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINE 218
L+ + +G T+++ H L ++++ +++L + + YG I E
Sbjct: 182 LRTVAREGATVIVSSHILRELEDIATHVLVLKTDQLFYGSIEE 224
pir||S16298 ferric enterobactin transport protein fepC - Escherichia coli
>gi|41432|emb|CAA40709| (X57471) fepC [Escherichia coli]
Length = 271
Score = 106 bits (263), Expect = 1e-22
Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGE- 62
+ L + Y + V +++ +E+ G T IIGPNG GKSTL++ + ++ P G + ++GE
Sbjct: 11 EQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEH 70
Query: 63 ----VSKKQLKKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
SK+ ++I + Q + T P I V+E V+ G Y LF + ++ V++
Sbjct: 71 IQHYASKEVARRIGLLAQNA----TTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTK 126
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
A+Q + ++ + LSGGQ QR +A L QE + LDEP +D + ++++L
Sbjct: 127 AMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELL 186
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNIF 234
+L + +G T+ V HDL++ Y +I L +++A G E + + +++ YG
Sbjct: 187 SELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGRPKEIVTAELIERIYGLRCM 246
Query: 235 IGD 237
I D
Sbjct: 247 IID 249
gb|AAF30474.1|AE002106_8 (AE002106) iron(III) dicitrate transport ATP-binding protein
[Ureaplasma urealyticum]
Length = 291
Score = 106 bits (261), Expect = 2e-22
Identities = 76/235 (32%), Positives = 132/235 (55%), Gaps = 14/235 (5%)
Query: 6 NLNVFYNEN--KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEIL----- 58
NL+ Y++ +VLK++ + T I+GPNG GKST KAI+ ++ I+
Sbjct: 32 NLSYRYHKKLPEVLKNLSFSIKKNSFTTILGPNGCGKSTTAKAIVKLLKLKKNIIKVFDR 91
Query: 59 -INGEVSKKQLKK-IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
IN E+S KQL + I+Y+ Q +I +V + ++ G L LG ++ +
Sbjct: 92 NIN-ELSFKQLAQLISYIPQSIEIPQG--TRVIDFITFGRNPYLGFSGILGKEDKLIIDL 148
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
+ ++ L D + + + ELSGGQ Q+V+LA CLVQ+ I LDEP +D ++ +++ L
Sbjct: 149 VINEMQLHDLKEKFMQELSGGQRQKVILALCLVQDTPIILLDEPTTYLDIKNQYELLESL 208
Query: 177 QDLK-HQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAY 229
+ L+ + KTI+ + HD+++ +Y D++ +L N ++ A G NE +++ LK Y
Sbjct: 209 KKLQILRQKTIIAILHDINQAIQYSDEVFVLKNGQIYANGNPNEVITKELLKNVY 263
emb|CAB49911.1| (AJ248286) DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
[Pyrococcus abyssi]
Length = 314
Score = 106 bits (261), Expect = 2e-22
Identities = 76/238 (31%), Positives = 128/238 (52%), Gaps = 17/238 (7%)
Query: 4 TKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING- 61
TK E + ++ G + GI+GPNGAGK+T ++ I I P SGE+L++G
Sbjct: 10 TKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGI 69
Query: 62 EVSKKQL---KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
+ K L K+IAY+ Q+ D+ T P+ V++ + Y + F K AK+ + L
Sbjct: 70 DAVKNPLEVRKRIAYMTQEPDL--TPPLSVRDYIIY--YFRFRGFSKRDAKK--HCEDIL 123
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ L + +++ +LS G +RV LA L + +FLDEP G+D S++ +++++
Sbjct: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
Query: 179 -LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
L+ +G T+++ HDL +V+ D +II+N+ G I S K LKK +G + I
Sbjct: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQ-----GKIVAEGSPKELKKRFGKTVRI 236
emb|CAB38595.1| (AL035654) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 317
Score = 106 bits (261), Expect = 2e-22
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
MI L Y + + D+ E+ PG++TG +GPNGAGKST ++ I+ + P SG L+
Sbjct: 1 MITLDRLTKRYGDKTAVSDLSFEINPGKVTGFLGPNGAGKSTTMRMIVGLDAPTSGRALV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G+ ++ + V D P + LG + SRV E LQ
Sbjct: 61 GGKRYEELRHPLREVGALLDARAGHPGRSARHHLLG-------LARSNGIPASRVGEVLQ 113
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V L + N++IG S G QR+ +A L+ + + DEP G+D + + ++++ L
Sbjct: 114 TVGLSEVANKRIGSFSLGMGQRLGIAAALLGDPKVLLFDEPVNGLDPDGVRWVRELMRSL 173
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNL 225
+G+TI + H +S+++E D ++++ R ++IA PI E + +L
Sbjct: 174 AAEGRTIFVSSHLMSEMQETADHLLVIGRGKIIADAPIEEVIAGSSL 220
gi|2622603 (AE000909) ABC transporter (ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 350
Score = 106 bits (261), Expect = 2e-22
Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 23/222 (10%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSG------ 55
I T +L Y + K + + +++ I G +GPNGAGK+T IK + ++P S
Sbjct: 5 IETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTARVA 64
Query: 56 --EILINGEVSKKQLKKIAYVEQKSDI--DHTFPIKVKECVSL-GTYTGLKLFQKLGAKE 110
+IL N + ++Q I V QK + D T V+ C G LK
Sbjct: 65 GYDILKNPDEVRQQ---IGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKE-------- 113
Query: 111 WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
SR+ E ++ V++ ++ +G++SGGQ Q+V L L+ + D +FLDEP +G+D +++
Sbjct: 114 -SRIEELMELVDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKR 172
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIA 212
++ D++ +L G TI++ HD+ +V+ D + I+N+ ++A
Sbjct: 173 VLWDLIDELNSSGHTIILCSHDMYEVELLCDYVGIINQGVLA 214
gi|2621173 (AE000802) cobalt transport ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 105 bits (260), Expect = 3e-22
Identities = 79/219 (36%), Positives = 114/219 (51%), Gaps = 20/219 (9%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGE---VSKKQL-- 68
+ L+ I G + ++GPNGAGKSTL I+ P SG+I+I+GE SK L
Sbjct: 20 EALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPTSGKIMIDGEELDYSKSGLIK 79
Query: 69 --KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE---WSRVSEALQKVNL 123
+K+ V Q D D F +V E V+ G +G E RV +ALQKV +
Sbjct: 80 ARQKVGIVFQNPD-DQLFAPRVDEDVAFGPLN-------MGLSEDEVEERVRDALQKVGM 131
Query: 124 LDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQG 183
L YE++ SGG+ +RV +A + + D + LDEP G+D I+ +L +L +G
Sbjct: 132 LGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGASQILRLLHNLNEEG 191
Query: 184 KTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFS 221
TI+I HD+ Y D I II + E+I+ G +E FS
Sbjct: 192 MTIIISTHDVDLAPLYSDRIYIISDGEIISTGAPSEVFS 230
gi|1176399 (U77778) putative ABC transporter subunit [Staphylococcus
epidermidis] >gi|1586615|prf||2204285A epiF gene
[Staphylococcus epidermidis]
Length = 231
Score = 105 bits (260), Expect = 3e-22
Identities = 68/231 (29%), Positives = 126/231 (54%), Gaps = 16/231 (6%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILIN 60
I T+NLN + + +LKDI L+V P + G++G NGAGKSTL+K I I+P SG+I ++
Sbjct: 6 IETRNLNKRFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTSGDIYLD 65
Query: 61 GE-VSKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
G +++K+L I + +E +H L LK+ +++ +S+ L
Sbjct: 66 GSPLTRKELTNIGSLIESPPTYNH-----------LSAQDNLKVVALNENIDFNEISKVL 114
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ VNL +++ S G QR+ +A L+++ + LDEP G+D + + ++L+
Sbjct: 115 ELVNLNVEPQKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRELLKS 174
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
L + +++I H LS++++ D + I++ + Y EN + +NL+ +
Sbjct: 175 LTNLNTSVIISSHILSEIQQLADHVGIIHNGKLEYQ--EENKTDENLEDVF 223
bbs|153692 (S72674) HitC=iron utilization protein [Haemophilus influenzae,
type b, DL42, NTHI TN106, Peptide, 356 aa] [Haemophilus
influenzae]
Length = 356
Score = 105 bits (260), Expect = 3e-22
Identities = 73/218 (33%), Positives = 116/218 (52%), Gaps = 17/218 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEI-- 57
++ KNLN F+NE +VL DI + G I ++G +G GK+TL++AI P +GEI
Sbjct: 11 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGASGCGKTTLLRAIAGFEQPSNGEIWL 70
Query: 58 ---LINGEVSK--KQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEW 111
LI GE Q + + YV Q+ + FP + V ++ G G + ++E
Sbjct: 71 KERLIFGENFNLPTQQRHLGYVVQEGIL---FPHLNVYRNIAYGLGNG----KGKNSEEK 123
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS-ISEK 170
+R+ + +Q + + +R +LSGGQ QRV LAR L + I LDEPF +D + ++
Sbjct: 124 TRIEQIMQLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQ 183
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR 208
I ++LQ L+ G + + V HD + Y D I I+ +
Sbjct: 184 IRQEMLQALRQSGASAIFVTHDRDEALRYADKIAIIQQ 221
emb|CAB72946.1| (AL139076) ABC-transporter ATP-binding protein [Campylobacter
jejuni]
Length = 242
Score = 104 bits (258), Expect = 6e-22
Identities = 73/232 (31%), Positives = 126/232 (53%), Gaps = 14/232 (6%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING-EV 63
NL + K++ I LEV G + G++GPNGAGK+T I ++ P SG++L++G +V
Sbjct: 8 NLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKVLLDGLDV 67
Query: 64 SKKQLKK-----IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
+K L K I Y+ Q+S I + V++ + L ++F K +V + L
Sbjct: 68 TKDPLNKRARSGIGYLPQESSIFKD--LSVEDNLLLAA----QIFYKDKKILHDKVEQML 121
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ +++ R+ LSGG+ +R +AR L+ E ++ LDEPF G+D I+ I ++++
Sbjct: 122 ELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIKE 181
Query: 179 LKHQGKTILIVHHDLSKVKEYFD-DIIILNRELIAYGPINENFSQKNLKKAY 229
LK G +LI H++ + D +I + L+A G +E + K++KK Y
Sbjct: 182 LKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATNKDVKKYY 233
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacterium tumefaciens]
Length = 502
Score = 104 bits (258), Expect = 6e-22
Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
++ + L + Y + VLK + L V PG +T IIGP+G+GKSTL++ + +V P SG+ILI+
Sbjct: 266 LDVRRLGMAYGDLDVLKGVDLSVKPGSVTCIIGPSGSGKSTLLRGLNRLVEPKSGDILID 325
Query: 61 GEV-----SKKQLKKIAYVEQKSDI--DHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
GE + +++ V Q ++ DHT E V L LK + L A E R
Sbjct: 326 GESILAMKPETLRRRVGMVFQHFNLFPDHT----ALENVMLS----LKKIKGLPAAEAER 377
Query: 114 VSEA-LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+++A L V L ++ + G LSGGQ QRV +AR L E + I DE +D K +
Sbjct: 378 IAKAGLADVGLASRQHHRPGGLSGGQQQRVAIARALAMEPEVILFDEVTSALDPELVKGV 437
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN 207
++++ +L +G T+++V H++ + D ++ ++
Sbjct: 438 LNLMAELGTRGMTMVVVTHEMGFARRVADQVVFMD 472
gi|2649585 (AE001034) ABC transporter, ATP-binding protein [Archaeoglobus
fulgidus]
Length = 285
Score = 104 bits (258), Expect = 6e-22
Identities = 68/236 (28%), Positives = 117/236 (48%), Gaps = 23/236 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
++ NL+V + + +K + L V G I G++GPNG+GK+T I+AI +VP+ GEI
Sbjct: 3 ILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMVPYEGEI--- 59
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKL-GAKEWSRVSEALQ 119
+ + ++ Q S + ++L L+ F L G ++ RV E L+
Sbjct: 60 ----RNYATSVGWMPQNSPL----------YLNLSVEENLRFFASLYGIEDERRVEEMLK 105
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V L Y R + LSGG QR +LA ++ + + + LDEP G+D + + L
Sbjct: 106 LVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKL 165
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
+ +GKTIL+ H + + + ++I N IA E ++ ++A GD + +
Sbjct: 166 REEGKTILVTTHYMDEAERCERLVLIRNGSKIA-----EGTPEEIKRRACGDRLLL 216
gi|1573050 (U32695) iron(III) ABC transporter, ATP-binding protein (hitC)
[Haemophilus influenzae Rd]
Length = 351
Score = 104 bits (258), Expect = 6e-22
Identities = 73/218 (33%), Positives = 116/218 (52%), Gaps = 17/218 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEI-- 57
++ KNLN F+NE +VL DI + G I ++G +G GK+TL++AI P +GEI
Sbjct: 6 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWL 65
Query: 58 ---LINGEVSK--KQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEW 111
LI GE Q + + YV Q+ + FP + V ++ G G + ++E
Sbjct: 66 KERLIFGENFNLPTQQRHLGYVVQEGVL---FPHLNVYRNIAYGLGNG----KGKNSEEK 118
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS-ISEK 170
+R+ + +Q + + +R +LSGGQ QRV LAR L + I LDEPF +D + ++
Sbjct: 119 TRIEQIMQLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQ 178
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR 208
I ++LQ L+ G + + V HD + Y D I I+ +
Sbjct: 179 IRQEMLQALRQSGASAIFVTHDRDESLRYADKIAIIQQ 216
sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HITC
>gi|1075080|pir||E64048 nucleotide binding protein
(potG) homolog - Haemophilus influenzae (strain Rd KW20)
Length = 356
Score = 104 bits (258), Expect = 6e-22
Identities = 73/218 (33%), Positives = 116/218 (52%), Gaps = 17/218 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEI-- 57
++ KNLN F+NE +VL DI + G I ++G +G GK+TL++AI P +GEI
Sbjct: 11 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWL 70
Query: 58 ---LINGEVSK--KQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEW 111
LI GE Q + + YV Q+ + FP + V ++ G G + ++E
Sbjct: 71 KERLIFGENFNLPTQQRHLGYVVQEGVL---FPHLNVYRNIAYGLGNG----KGKNSEEK 123
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS-ISEK 170
+R+ + +Q + + +R +LSGGQ QRV LAR L + I LDEPF +D + ++
Sbjct: 124 TRIEQIMQLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQ 183
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR 208
I ++LQ L+ G + + V HD + Y D I I+ +
Sbjct: 184 IRQEMLQALRQSGASAIFVTHDRDESLRYADKIAIIQQ 221
sp|P07821|FHUC_ECOLI FERRICHROME TRANSPORT ATP-BINDING PROTEIN FHUC >gi|1552729 (U70214)
ferrichrome-iron transport protein FhuC [Escherichia
coli] >gi|1786345 (AE000124) ATP-binding component of
hydroxymate-dependent iron transport [Escherichia coli]
Length = 265
Score = 104 bits (257), Expect = 7e-22
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 10/234 (4%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEV 63
+N++ +L + L G++TG+IG NG+GKSTL+K + P S GEIL++ +
Sbjct: 15 RNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQP 74
Query: 64 -----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
SK +K+AY+ Q+ + + V+E V++G Y + GA + +V EA+
Sbjct: 75 LESWSSKAFARKVAYLPQQ--LPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAI 132
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
V L +R + LSGG+ QR +A + Q++ + LDEP +D + ++ ++
Sbjct: 133 SLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHR 192
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
L + +G T++ V HD++ Y D ++ L E+IA G E + L+ YG
Sbjct: 193 LSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYG 246
gi|2650236 (AE001077) ABC transporter, ATP-binding protein [Archaeoglobus
fulgidus]
Length = 241
Score = 104 bits (256), Expect = 9e-22
Identities = 73/233 (31%), Positives = 123/233 (52%), Gaps = 13/233 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI NL V Y + + ++ V G + I+GPNGAGKS+++K+I+ IV GEI I+
Sbjct: 1 MIEVNNLTVRYGKTTAVSNVGFTVERGEVVAILGPNGAGKSSIMKSIVGIVDFEGEIKID 60
Query: 61 GEVSKKQLKK--IAYV-EQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
G + ++ K YV E+ IDH P + ++ L +KLG + RV +
Sbjct: 61 GMNANTKVAKNLFGYVPEEIRLIDHLTPEEF--------FSFLVSVRKLGEEAAKRVEKY 112
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
++ L + ++ I LS G ++V + L+ + Y+ LDEP G+D+ S +++ +++
Sbjct: 113 VRIFRLEEQMDKPIISLSMGNKKKVAVVAALLHDPPYLLLDEPLNGLDAFSARVLKEVMA 172
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNREL-IAYGPINENFSQKNLKKAY 229
K + IL+ H + + D +IILNR L IA G + E S L++A+
Sbjct: 173 -RKTESGGILLSTHIMEIAERLADRVIILNRGLKIAEGTLEELKSYGTLEEAF 224
gi|2649880 (AE001054) cobalt transport ATP-binding protein (cbiO-1)
[Archaeoglobus fulgidus]
Length = 326
Score = 104 bits (256), Expect = 9e-22
Identities = 74/236 (31%), Positives = 121/236 (50%), Gaps = 17/236 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI +L+ Y + +VLK + + G++T ++G NGAGK+TL+K + ++ P SG+++I
Sbjct: 34 MIEAVDLHFCYGDAEVLKGVNFKAERGKVTVLMGRNGAGKTTLLKHLNGLLRPKSGKVII 93
Query: 60 NG---EVSKKQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYT-GLKLFQKLGAKEW 111
+G + +K L K++ YV Q D D V + V+ G GLK G +
Sbjct: 94 DGRELKYDRKSLLEVRKRVFYVFQNPD-DQILSPTVWQDVAFGPRNLGLK-----GERLE 147
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
V AL+ V L YE R LSGG+ +R+ +A L DY +DEP +D ++
Sbjct: 148 RVVRNALEAVGLSGYEKRLCSTLSGGEKRRLAIASALAMNPDYCIMDEPSANVDGEGLRM 207
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKK 227
I +I++ L+ +GK +++ HD KE D ++ I + E FS +K
Sbjct: 208 IAEIIRKLREEGKGVVVSTHDADLAKEVGDYFYFMDDGKIVWE--GEEFSYSVARK 261
pir||S60887 ferric exochelin uptake protein FxuB - Mycobacterium smegmatis
>gi|595403 (U10425) FxuB [Mycobacterium smegmatis]
>gi|1092650|prf||2024335B fxuB gene [Mycobacterium
smegmatis]
Length = 235
Score = 104 bits (256), Expect = 9e-22
Identities = 59/208 (28%), Positives = 116/208 (55%), Gaps = 9/208 (4%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV- 63
++++ Y++ ++ + ++V R+T I+GPN GKSTL++ ++ P +G ++++G
Sbjct: 17 DVSIGYDDRTIIDGLTVQVPADRVTAIVGPNACGKSTLLRGFARLLTPSAGRVILDGHDI 76
Query: 64 ----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+K +++ + Q S I V + VS G + K+F++ + + V++A++
Sbjct: 77 ATMHTKDVARRLGLLPQTSIAPEG--ITVADLVSRGRFPHQKVFRQWSRDDAAAVADAMR 134
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+ + R + ELSGGQ QRV +A L QE I LDEP +D + ++D+ L
Sbjct: 135 HTGVTELSARLVDELSGGQRQRVWVAMVLAQETPLILLDEPTTYLDIAHQVELLDLFAML 194
Query: 180 -KHQGKTILIVHHDLSKVKEYFDDIIIL 206
+ G+T++ V HDL++ Y D++I++
Sbjct: 195 NREHGRTVVAVLHDLNQACRYADELIVM 222
gi|2649451 (AE001025) ABC transporter, ATP-binding protein [Archaeoglobus
fulgidus]
Length = 294
Score = 103 bits (254), Expect = 2e-21
Identities = 72/220 (32%), Positives = 109/220 (48%), Gaps = 10/220 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I +NL +N + L I L V G I G +GPNGAGK+T I L ++ P SG + I
Sbjct: 4 IEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSVRIA 63
Query: 61 G-EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G +V +K + + +I P +L L F + A V E L
Sbjct: 64 GMDVEEKPV-------EVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVDELLA 116
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V L D ++++GE S G QR+ LA+ L+ + + +FLDEP G+D I+++L
Sbjct: 117 LVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIREL 176
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINE 218
+GKT H LS+V+E + I+NR ++ G I+E
Sbjct: 177 NQKGKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISE 216
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER) >gi|973330
(U30873) NatA [Bacillus subtilis]
>gi|2415726|dbj|BAA22236| (AB000617) NatA [Bacillus
subtilis] >gi|2632561|emb|CAB12069| (Z99105) Na+ ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 246
Score = 103 bits (254), Expect = 2e-21
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 38/218 (17%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAY 73
K ++D+ L + G + GI+G NGAGK+T+++ I +++ P G I ++G + KQ
Sbjct: 19 KAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQGVITVDGFDTVKQ------ 72
Query: 74 VEQKSDIDHTFPIKVKECVSL--GTYTGLKLFQKLGAKE----------------WSRVS 115
P +VK+ + + G TGL + ++ AKE +R+
Sbjct: 73 -----------PAEVKQRIGVLFGGETGL--YDRMTAKENLQYFGRLYGLNRHEIKARIE 119
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
+ ++ + DY NR++G S G Q+V +AR L+ + D I DEP G+D S I +
Sbjct: 120 DLSKRFGMRDYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREF 179
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAY 213
+Q LK + KTIL H + +V+ D +I+++ + Y
Sbjct: 180 IQQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIY 217
emb|CAA29254| (X05810) fhuC product (AA 1-265) [Escherichia coli]
Length = 265
Score = 103 bits (254), Expect = 2e-21
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 10/234 (4%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEV 63
+N++ +L + L G++TG+IG NG+GKSTL+K + P S GEIL++ +
Sbjct: 15 RNISFRVPGRTLLHPLCLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQP 74
Query: 64 -----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
SK +K+AY+ Q+ + + V+E V++G Y + GA + +V EA+
Sbjct: 75 LESWSSKAFARKVAYLPQQ--LPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAI 132
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
V L +R + LSGG+ QR +A + Q++ + LDEP +D + ++ ++
Sbjct: 133 SLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHR 192
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
L + +G T++ V HD++ Y D ++ L E+IA G E + L+ YG
Sbjct: 193 LSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYG 246
emb|CAA07722| (AJ007906) FhuC [Rhizobium leguminosarum]
Length = 268
Score = 102 bits (253), Expect = 2e-21
Identities = 63/234 (26%), Positives = 120/234 (50%), Gaps = 10/234 (4%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILINGEV 63
+N+ + N++L+D+ L+ G + ++G NG+GKS+L+K + +VP +G I
Sbjct: 18 ENIGLLIEGNEILRDVSLKFPAGEVVALVGHNGSGKSSLLKMLARQLVPSAGSISYGNRD 77
Query: 64 SKKQ-----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
+ + +AY+ Q D+ + V+E V G Y + + +V EAL
Sbjct: 78 LRTYGERVFARSVAYLPQ--DVTTGSEMTVRELVGCGRYPWHGALGRFTKNDEGKVEEAL 135
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ + + +R +G LSGG+ QR +A + Q+A + LDEP +D + ++ +++
Sbjct: 136 RATYIEKFADRIVGTLSGGERQRAWIAMLIAQDARCLLLDEPTAALDVAHQIEVLSLVRR 195
Query: 179 LKHQ-GKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYG 230
L H+ G +++IV HD++ + D I L R ++A G + + L++ YG
Sbjct: 196 LAHELGSSVVIVLHDINMAARFCDRIHALKRGRVVASGTASAILAPNTLQEIYG 249
dbj|BAA30472| (AP000006) 308aa long hypothetical ATP-binding transport protein
[Pyrococcus horikoshii]
Length = 308
Score = 102 bits (253), Expect = 2e-21
Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 20/235 (8%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I + L Y + K + ++ V G + G +GPNGAGK+T I ++L I+ P SG++ I
Sbjct: 4 IEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDVRIL 63
Query: 61 G-EVSKKQLK---KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS-RVS 115
G ++ K+ LK ++ ++ + + I +E + F ++ +E R+
Sbjct: 64 GYDIFKEPLKAKERLGFLPENATI-------YEELTAWRNLDFFASFYRMSKQEKEKRIE 116
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
E L+ V L D R+ S G QR+LLA+ L+ + + + LDEP G+D +++ DI
Sbjct: 117 ELLKLVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDI 176
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKAY 229
+++ + QGKT+ H LS+V+E D + II+ +L G + E +KK Y
Sbjct: 177 IREQRKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEE------IKKQY 225
gb|AAD35676.1|AE001734_3 (AE001734) amino acid ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 242
Score = 102 bits (252), Expect = 3e-21
Identities = 70/229 (30%), Positives = 129/229 (55%), Gaps = 14/229 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILI 59
++ ++L+ ++ + VL+ I LEV G + IIGP+G+GKSTL++ I + + G+I
Sbjct: 3 VLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKIYF 62
Query: 60 NGE-VSKKQLKKI----AYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSR 113
GE ++ + + +I V Q+ ++ FP + V ++L +K QK A E +
Sbjct: 63 KGELITHRNINRIRSSIGMVFQQFNL---FPHLSVLNNLTLAPMK-VKNMQKDEAVE--K 116
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ L++V L++ N + G LSGGQ QRV +AR L+ + + + DEP +D K ++
Sbjct: 117 AKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVL 176
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFS 221
D+++DL G T+LIV H++ ++ D ++ ++ ++ GP + FS
Sbjct: 177 DVIKDLAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFS 225
emb|CAB15283| (Z99120) similar to iron(III) dicitrate transport permease
[Bacillus subtilis]
Length = 275
Score = 102 bits (251), Expect = 4e-21
Identities = 65/217 (29%), Positives = 113/217 (51%), Gaps = 9/217 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I+T+ L++ Y + ++ ++ L + G IT IG NG GKSTL++++ ++ P G +L+
Sbjct: 6 ISTETLSLGYGDAVIIDELNLTIPKGEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLE 65
Query: 61 GEV-----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G +K+ K++A + Q + V + V G Y ++ ++ V
Sbjct: 66 GRAIAKLPTKEVAKELAILPQGPSAPEG--LTVHQLVKQGRYPYQNWLKQWSKEDEEAVE 123
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
AL+ L D +R + LSGGQ QR +A L QE D I LDEP +D + I+D+
Sbjct: 124 RALKATKLEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILDL 183
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELI 211
L +L + + +TI++V HDL+ Y ++ + + I
Sbjct: 184 LFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRI 220
gb|AAF30499.1|AE002109_2 (AE002109) ABC transporter [Ureaplasma urealyticum]
Length = 236
Score = 101 bits (249), Expect = 6e-21
Identities = 72/237 (30%), Positives = 121/237 (50%), Gaps = 14/237 (5%)
Query: 1 MINTKNLNVFYNE-NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEIL 58
++ KNL Y + N+ + D+ V G I IG NG+GK+T IK+I+N + G IL
Sbjct: 6 ILEVKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGSIL 65
Query: 59 INGEVSK--KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
I+G +K K +KI YV + + FP ++ L ++ L K A E R+
Sbjct: 66 IDGFDNKTPKSHEKIGYVPEIA----LFPSELTTFQYLYSFARLSNLNKKQAIE--RIHN 119
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L+K + D +N++ S GQ ++V+L + L+ + + I LDEP +D + +IL
Sbjct: 120 FLEKFRISDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSARHEFNNIL 179
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
++L Q KTI I H L ++ Y D + ++++ + Y L+K Y D++
Sbjct: 180 KELHEQNKTIFICSHILKEMDTYVDSLTLIHKGKLVY----SGHKYDALEKIYYDSV 232
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN IN
BMRU-ANSR INTERGENIC REGION >gi|1303951|dbj|BAA12606|
(D84432) YqiZ [Bacillus subtilis]
>gi|2634830|emb|CAB14327| (Z99116) similar to amino acid
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 240
Score = 101 bits (249), Expect = 6e-21
Identities = 70/235 (29%), Positives = 119/235 (49%), Gaps = 10/235 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV--PHSGEIL 58
MI + L+ + +++VLK+I + G + +IGP+G+GKST ++ LN++ P+ G I
Sbjct: 1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRC-LNLLEKPNGGTIT 59
Query: 59 ING-EVSKKQLKKIAYVEQKSDID---HTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I E++K + + E + H FP K + +K K A+E +
Sbjct: 60 IKDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQE--KA 117
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+ L+KV L + N LSGGQ QRV +AR L D + DEP +D K ++
Sbjct: 118 EDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKEVLQ 177
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAY-GPINENFSQKNLKKA 228
++++L G T++IV H++ KE D ++ +++ +I G E F K+A
Sbjct: 178 VMKELVETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSKRA 232
sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1272
>gi|1074079|pir||F64113 ferric enterobactin transport
ATP-binding protein (fepC) homolog - Haemophilus
influenzae (strain Rd KW20) >gi|1574727 (U32807) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 263
Score = 101 bits (249), Expect = 6e-21
Identities = 68/236 (28%), Positives = 123/236 (51%), Gaps = 9/236 (3%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILI 59
++ T+NL + Y +++ IQ + +I ++G NGAGKST +K +L + P G+I+
Sbjct: 11 LLETQNLAIGYEGKTLVQHIQFTLEENQICCLLGANGAGKSTFLKTLLGLQPPIGGDIVW 70
Query: 60 NG----EVSKKQLKK-IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
G + S +L + IAYV Q H FP V++ V +G LK +Q +
Sbjct: 71 QGKSLSDYSPTELARHIAYVPQAHS--HLFPFLVQDMVMMGRSAFLKWYQTPKKSDLDLA 128
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
ALQ++ + R +LSGG+ Q VL+AR + Q+A + +DEP +D ++ +++
Sbjct: 129 LMALQELEIAHLAQRYYHQLSGGEKQLVLIARAIAQQAKLLIMDEPTSSLDFGNQIRVLE 188
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNREL-IAYGPINENFSQKNLKKAY 229
++ L+ Q ++I H+ + D+I++L+++ G + +NL K Y
Sbjct: 189 KIKQLQKQNIALIISTHNPQQAAFLGDNIVLLDQQFGFQQGDKKHLLTLENLAKIY 244
gb|AAA58003.1| (U18997) ORF_o241 [Escherichia coli] >gi|1789593 (AE000399)
putative ATP-binding component of a transport system
[Escherichia coli]
Length = 241
Score = 101 bits (249), Expect = 6e-21
Identities = 68/236 (28%), Positives = 118/236 (49%), Gaps = 13/236 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILIN 60
+ KNL Y +V++D+ L V G I G++GPNGAGK+T ++ IVP +G I+I+
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query: 61 GE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+ + + + I Y+ Q++ I + L L Q+ R
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRA 118
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+E +++ ++ + LSGG+ +RV +AR L +I LDEPF G+D IS I
Sbjct: 119 NELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR 178
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
I++ L+ G +LI H++ + + I+++ LIA+G E +++K+ Y
Sbjct: 179 IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVY 234
emb|CAB73179.1| (AL139076) ABC-type amino-acid transporter ATP-binding protein
[Campylobacter jejuni]
Length = 242
Score = 101 bits (248), Expect = 8e-21
Identities = 77/240 (32%), Positives = 120/240 (49%), Gaps = 7/240 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
MI KN+N +Y + VLK+I L V G IIGP+G+GKST I+ + + SGE+++
Sbjct: 1 MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS-EAL 118
N V + K + + + F + V QK KE + + L
Sbjct: 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKYL 120
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ V LLD N LSGGQ QRV +AR L + YI DEP +D + + ++D++++
Sbjct: 121 KVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMKE 180
Query: 179 LKHQGK-TILIVHHDLSKVKEYFDDIIILNRELIAYGPI-NENFSQKNLKKAYGDNIFIG 236
+ HQ T+++V H++ KE D II + I I +E FS ++A +F+G
Sbjct: 181 ISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSNPKTERA---RLFLG 237
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 101 bits (248), Expect = 8e-21
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 13/225 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI +L+ Y +V+K I + + G + G++GPNGAGKST I I +++ P SG++LI
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 60 NGEVSKKQLKKI----AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G K+ K I V Q+ + H + + G GLK G + R+
Sbjct: 61 KGGSIHKRSKAIRSILGVVPQEIAVYHDLTAR-ENLAFFGKIYGLK-----GEELKHRME 114
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
LQ V L + +N ++ SGG +R+ +A L+ E + I +DEP VGID S I++
Sbjct: 115 STLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILET 174
Query: 176 LQDLKHQGK-TILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINE 218
++ L + + T++ H + +V+ D + I++R E+IA G +E
Sbjct: 175 VKTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDE 219
emb|CAB52849.1| (AL109848) putative iron-siderophore uptake system ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 301
Score = 101 bits (248), Expect = 8e-21
Identities = 64/236 (27%), Positives = 125/236 (52%), Gaps = 8/236 (3%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ +N+ + Y++ + + + +E+ T I+GPN GKSTL++A+ ++ P G +L++
Sbjct: 23 LTAENVTLAYDQRVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVLLD 82
Query: 61 GEVSK----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G V + KQ+ + + +S I I V + V G Y + ++ ++ V E
Sbjct: 83 GSVIQSMPAKQVARTLGLLPQSSIAPD-GITVGDLVGRGRYPHQGILRQWSTEDERVVQE 141
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
++ + + + +R + ELSGGQ QRV +A L Q+ + LDEP +D + ++D+
Sbjct: 142 SMARTGISELADRYVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLC 201
Query: 177 QDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYG 230
+L + QG+T++ V HDL+ Y +I L ++IA G + + +++ +G
Sbjct: 202 AELHEEQGRTLVAVLHDLNHAARYATHLIALREGQVIAEGAPKDIVTADLVERVFG 257
dbj|BAA29913| (AP000003) 312aa long hypothetical ATP-binding protein [Pyrococcus
horikoshii]
Length = 312
Score = 101 bits (248), Expect = 8e-21
Identities = 63/213 (29%), Positives = 109/213 (50%), Gaps = 9/213 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I NL +Y ++ + V G + G +GPNGAGK+T I+ + ++ P SG++ +
Sbjct: 7 VIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRV 66
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKL-GAKEWS---RVS 115
G ++ +K+ ++ + P + L LKL +L G +W R
Sbjct: 67 LGYDMTREPEKLKARQRMGIV----PEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSI 122
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
E L+ L + N ++ S G QR++LA ++ + + FLDEP G+D IS +II DI
Sbjct: 123 ELLKLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDI 182
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR 208
++D K GKTI + H+++ E + I I+ +
Sbjct: 183 IRDEKKAGKTIFLTTHNMNDANELCERIGIIRK 215
gb|AAD36730.1|AE001808_5 (AE001808) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 259
Score = 100 bits (247), Expect = 1e-20
Identities = 65/204 (31%), Positives = 109/204 (52%), Gaps = 11/204 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILING 61
I +++ YN + VLKD+ E G+I ++G NG+GK+TL+K + ++ GEI ++G
Sbjct: 3 ITLNSVSFRYNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLEAEGEIFLDG 62
Query: 62 EVSKKQL--KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+ L K + YV Q V+E V+ L++ ++ R+ + L+
Sbjct: 63 SPADPFLLRKNVGYVFQNPS-SQIIGATVEEDVAFS----LEIMGLDESEMRKRIKKVLE 117
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V L E LSGGQ QR+ +A L ++ ++ LDEP +D S++ I +L+ L
Sbjct: 118 LVGLSGLEKEDPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESL 177
Query: 180 KHQGKTILIVHHDLSKVKEYFDDI 203
K++GK I++V H+L EY DD+
Sbjct: 178 KNEGKGIILVTHEL----EYLDDM 197
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314| (D12938) ORF1 [Escherichia
coli] >gi|551337 (U12684) orf241 [Escherichia coli]
Length = 241
Score = 100 bits (247), Expect = 1e-20
Identities = 68/236 (28%), Positives = 117/236 (48%), Gaps = 13/236 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
+ KNL Y +V++D+ L V G I G++GPNGAGK+T ++ IVP G I+I+
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNIIID 63
Query: 61 GE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+ + + + I Y+ Q++ I + L L Q+ R
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRA 118
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+E +++ ++ + LSGG+ +RV +AR L +I LDEPF G+D IS I
Sbjct: 119 NELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR 178
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
I++ L+ G +LI H++ + + I+++ LIA+G E +++K+ Y
Sbjct: 179 IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVY 234
emb|CAB61720.1| (AL133220) ABC transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 280
Score = 100 bits (246), Expect = 1e-20
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 15/232 (6%)
Query: 7 LNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGE-VS 64
L V VL + +EV G + ++GPNGAGKSTL+ A+ VP + G + ++G VS
Sbjct: 32 LRVHLGGRPVLDGVDVEVRAGEVLALVGPNGAGKSTLLGALAADVPAAEGVVRVHGRPVS 91
Query: 65 KKQLKKIAY----VEQKSDIDHTFPIKVKECVSLGT--YTGLKLFQKLGAKEWSRVSEAL 118
++A + Q + + +FP V+E V +G + G ++ + V+EA+
Sbjct: 92 DWSAPELALRRAVLPQSASL--SFPFAVEEVVRMGRAPWAG----GDRADEDEAAVAEAM 145
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ + + R LSGG+ RV LAR L Q A + LDEP +D +++++ + ++
Sbjct: 146 ARTEVAGFAGRPFSALSGGERARVALARVLAQRAPLLLLDEPTAALDLRHQELVLRLCRE 205
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAY 229
G +++V HDL+ Y D + +L + + A GP +E F+Q L + Y
Sbjct: 206 RARAGDAVVVVLHDLALAAAYADRVALLRSGRIAAGGPPSEVFAQGLLSEVY 257
emb|CAB49054.1| (AJ248283) cobalt ABC transporter, ATP-binding protein (cbiO)
[Pyrococcus abyssi]
Length = 260
Score = 100 bits (246), Expect = 1e-20
Identities = 72/231 (31%), Positives = 128/231 (55%), Gaps = 20/231 (8%)
Query: 1 MINTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
MI K++ +Y++ K VLK I G + I+GPNG+GK+TL+K + ++ P G+++
Sbjct: 1 MIEFKDVWFWYDDGKYVLKSINFRFKGGTLA-IVGPNGSGKTTLVKMMNGLLKPKKGDVI 59
Query: 59 INGEVSK-----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS- 112
I+G ++ + + + YV Q D F V + V+ G + LG E
Sbjct: 60 IDGINTRDKSVAEMSRLVGYVFQNPDAMF-FEENVFKEVAFGP-------RNLGLSEEEV 111
Query: 113 --RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
RV AL++V L +E+R ELSGG+ QR+ +A L + Y+ LDEP G+D +
Sbjct: 112 EKRVRWALREVGLEGFEDRSPLELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLR 171
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENF 220
++++++ L+ +I++V HD+ V E D++++L + E+ +GP+ + F
Sbjct: 172 GLINVIRKLREDNHSIILVTHDMELVLEVADEVLLLKDGEIKFFGPVEDFF 222
gi|4155391 (AE001511) IRON(III) DICITRATE TRANSPORT SYSTEM ATP-BINDING PROTEIN
[Helicobacter pylori J99]
Length = 255
Score = 100 bits (246), Expect = 1e-20
Identities = 65/214 (30%), Positives = 114/214 (52%), Gaps = 10/214 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILI- 59
++ KNL+ Y++ +L + V IT I+ PNG+GK+TL+K +L ++ E I
Sbjct: 2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIK 61
Query: 60 --NGEVSK----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
N ++ ++ K IAY+ Q + F V + V +G T L LF AK
Sbjct: 62 ACNKDILPLKPYEKAKLIAYIPQVEY--YAFNFSVLDFVLMGKATHLNLFAMPKAKHIKE 119
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ L++++L +++ I +LSGGQ Q VLLAR L+Q + LDEP +D ++ +
Sbjct: 120 ATSVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFF 179
Query: 174 DILQD-LKHQGKTILIVHHDLSKVKEYFDDIIIL 206
D ++D +K + ++L+ HD + V + +++L
Sbjct: 180 DAIKDEMKKRELSVLVNIHDPNLVARHSTHVVML 213
gi|2621547 (AE000832) sulfate transport system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 100 bits (246), Expect = 1e-20
Identities = 71/224 (31%), Positives = 118/224 (51%), Gaps = 10/224 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV--PHSGEIL 58
+I + Y + KVL+D+ L+V G GIIGP GAGKSTL++ I++++ P GEIL
Sbjct: 4 VIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLR-IMDLLERPDDGEIL 62
Query: 59 INGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
GE + LK + + + P+ + V+ G ++ + + S V + L
Sbjct: 63 FMGE-NVDDLKPLEVRRRMGMVFQNTPV-FRGTVAESILYGPRIRGERPHE--SEVKDVL 118
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ + L Y +R+ ELSGG+ QR+ LA+ L+ + + LDE +D IS + D++ +
Sbjct: 119 ETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSRMEDVIAE 178
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQ 222
L T++ HDL + ++ D I ILNR ++ G E F +
Sbjct: 179 L---DVTVIFTTHDLLQGQKLADRIAILNRSILQTGEPREIFKK 219
sp|O05732|Y888_HELPY PROBABLE IRON CHELATIN TRANSPORT ATP-BINDING PROTEIN HP0888
>gi|2072456 (U94318) FepC [Helicobacter pylori]
>gi|2314024|gb|AAD07936.1| (AE000598) iron(III)
dicitrate ABC transporter, ATP-binding protein (fecE)
[Helicobacter pylori 26695]
Length = 255
Score = 100 bits (246), Expect = 1e-20
Identities = 65/214 (30%), Positives = 114/214 (52%), Gaps = 10/214 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILI- 59
++ KNL+ Y++ +L + V IT I+ PNG+GK+TL+K +L ++ E I
Sbjct: 2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIK 61
Query: 60 --NGEVSK----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
N ++ ++ K IAY+ Q + F V + V +G T L LF AK
Sbjct: 62 ACNKDILPLKPYEKAKLIAYIPQVEY--YAFNFSVLDFVLMGKATHLNLFAMPKAKHIKE 119
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ L++++L +++ I +LSGGQ Q VLLAR L+Q + LDEP +D ++ +
Sbjct: 120 ATSVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFF 179
Query: 174 DILQD-LKHQGKTILIVHHDLSKVKEYFDDIIIL 206
D ++D +K + ++L+ HD + V + +++L
Sbjct: 180 DAIKDEMKKRELSVLVNIHDPNLVARHSTHVVML 213
sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|98203|pir||A42478
glutamine transport protein glnQ - Bacillus
stearothermophilus >gi|142988 (M61017) membrane
transport protein [Bacillus stearothermophilus]
Length = 242
Score = 100 bits (246), Expect = 1e-20
Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 16/238 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
MI +N +Y + VLKDI L + G + IIGP+G+GKSTL++ I + SGE+++
Sbjct: 1 MIYFHQVNKYYGDFHVLKDINLTIHQGEVVVIIGPSGSGKSTLVRCINRLETISSGELIV 60
Query: 60 -NGEVSKKQL------KKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEW 111
N +V+ K + + I V Q ++ +P + V + ++L L++ +K AKE
Sbjct: 61 DNVKVNDKHIDINQLRRNIGMVFQHFNL---YPHMTVLQNITLAPMKVLRIPEK-EAKET 116
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
+ L+KV + D N ELSGGQ QRV +AR L + + DEP +D +
Sbjct: 117 AMYY--LEKVGIPDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALDPETIGE 174
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKA 228
++D+++ L +G T+++V H++ +E D I+ +++ ++ P E FS ++A
Sbjct: 175 VLDVMKQLAKEGMTMVVVTHEMGFAREVADRIVFMDQGRILEEAPPEEFFSNPKEERA 232
pir||B36931 hypothetical protein (sfp0 5' region) - Bacillus subtilis
>gi|304168 (L17438) homology to family of bacterial
receptor ATPases [Bacillus subtilis]
Length = 246
Score = 100 bits (246), Expect = 1e-20
Identities = 65/229 (28%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
M+ K LN + EN++LK I +++ G++ I+GP+G+GK+TL++ + + +P+ GE+
Sbjct: 1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAF 60
Query: 60 NG---EVSKKQLKKIAYVEQK--SDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+ + SKK ++I+ K + + P+ + + G QK +E +
Sbjct: 61 DDFSIDFSKKVNRRISKASPKIRNGVSGVSPVPHRTALE-NVMEGPVQVQKRNKEEVRKE 119
Query: 115 S-EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ + L KV L D + +LSGGQ QRV +AR L + + + DEP +D ++
Sbjct: 120 AIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGEVL 179
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIA-YGPINENFS 221
+++DL ++G T+++V H++ +E D++I ++ +I GP + FS
Sbjct: 180 KVIKDLANEGWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFS 228
gb|AAF12128.1|AE002088_5 (AE002088) iron ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 274
Score = 99.8 bits (245), Expect = 2e-20
Identities = 70/242 (28%), Positives = 126/242 (51%), Gaps = 15/242 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
++ + ++V + ++ + G IIGPNGAGKSTL++A+L + +GE+ +
Sbjct: 18 LLEARGVHVRAGQTLAVRGVDATFRTGEFAAIIGPNGAGKSTLLRALLGLSGLEAGEVRL 77
Query: 60 NGEVSK-----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
NG + ++ +++AY+ Q + +V++ V+LG G + L + WS
Sbjct: 78 NGRPLRTWNRAERSRRLAYLAQSEPLPPE--TRVRDVVTLGRGAGEWRWGLLPTRPWSEA 135
Query: 115 SE-----ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE 169
E AL + + +E+R++ ELSGG+ QRV LAR L + + LDEP +D
Sbjct: 136 DEEAVNRALDRTDTRRFEDRRVSELSGGEGQRVALARALAAGPELLLLDEPTNHLDLAYT 195
Query: 170 KIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKA 228
+M L+ G ++ V HDL+ + D +++L+R E++A G E + +++ A
Sbjct: 196 LDLMRSLRREVEAGLGVIAVLHDLN-LAARADRLLLLSRGEVLATGTPAEVLTPEHIAAA 254
Query: 229 YG 230
YG
Sbjct: 255 YG 256
gb|AAD36131.1|AE001765_10 (AE001765) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 99.8 bits (245), Expect = 2e-20
Identities = 70/237 (29%), Positives = 121/237 (50%), Gaps = 14/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ +NL + V+ + LE G I G++GPNGAGK+T+ IL +V P SG+I+
Sbjct: 3 VLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKIIF 62
Query: 60 NG------EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
V ++ I Y++Q++ I + V+E + L L+ +K K +
Sbjct: 63 RDVDITKFPVYRRARLGITYLQQETSIFGG--LTVRENIDLV----LRFHEKDKEKRERK 116
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ E L + +L EN+ LSGG+ +++ LAR + +I LDEPF GID + K I
Sbjct: 117 IEELLHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQ 176
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKAY 229
+ +LK + I+I H++ ++ E D I +I E++A G + +++ Y
Sbjct: 177 KMTLELKQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILEDETVREVY 233
emb|CAA05520| (AJ002531) nosF [Bradyrhizobium japonicum]
Length = 302
Score = 99.8 bits (245), Expect = 2e-20
Identities = 63/209 (30%), Positives = 111/209 (52%), Gaps = 19/209 (9%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI------NGEV 63
Y + L+D+ ++ PGR++ ++G NGAGK+TLIK +L ++ P G I + GE
Sbjct: 14 YRTVRALRDVSFDLAPGRLSALVGHNGAGKTTLIKLMLGLIRPDQGSIRVLDEDPAAGEF 73
Query: 64 SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNL 123
S + +++ Y+ P V +L L + +L + S+ L +V L
Sbjct: 74 SAR--RQLGYL----------PENVAFNAALTGRETLTFYARLKHVKPSKAWAFLDRVGL 121
Query: 124 LDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQG 183
D +R++G S G QR+ LA+ L+ + LDEP G+D + +IL +L+ G
Sbjct: 122 TDAADRRVGTYSKGMRQRLGLAQALLGRPRVLLLDEPTTGLDPALRQTFYEILNELRDDG 181
Query: 184 KTILIVHHDLSKVKEYFDDIIILNRELIA 212
T+LI H L+++++ + ++I+NR L+A
Sbjct: 182 ATVLISSHALNELEDRAEHVLIMNRGLLA 210
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20) >gi|1574704
(U32794) ABC transporter, ATP-binding protein
[Haemophilus influenzae Rd]
Length = 241
Score = 99.8 bits (245), Expect = 2e-20
Identities = 66/237 (27%), Positives = 117/237 (48%), Gaps = 13/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILI 59
++ +NL Y KV+ D+ L V I G++GPNGAGK+T ++ +V G+I+I
Sbjct: 3 ILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKIVI 62
Query: 60 NGE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+GE + + + I Y+ Q++ I + L L Q+ +
Sbjct: 63 DGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRR-----EK 117
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
E +++ N+ + LSGG+ +RV +AR L +I LDEPF G+D IS I
Sbjct: 118 ADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIK 177
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
I+ DL+++G +LI H++ + + + I+ ++IA G + + + +K+ Y
Sbjct: 178 KIITDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMNDEQVKRVY 234
emb|CAB73160.1| (AL139076) putative glutamine transport ATP-binding protein
[Campylobacter jejuni]
Length = 242
Score = 99.5 bits (244), Expect = 2e-20
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 17/239 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
MI KNL Y E +VLK+I + G + IIGP+G GKST ++ I + + SGEILI
Sbjct: 1 MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSGEILI 60
Query: 60 NGE-VSKKQL------KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
N + + K++ +K++ V Q ++ + C++ TG+ L Q+ K
Sbjct: 61 NKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLT-PIKTGI-LSQEEAIK--- 115
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ L KV L D EN +LSGGQ QR+ +AR L+ D I DEP +D +
Sbjct: 116 KAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGEV 175
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYG----PINENFSQKNLKK 227
+ I++D+ +G T+L+V H++ + + I +++ IA + EN S + L++
Sbjct: 176 LSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDASPKEVFENPSNERLRE 234
gi|805090 (U17255) NisF [Lactococcus lactis] >gi|1095449|prf||2109193A nisF
gene [Lactococcus lactis]
Length = 225
Score = 99.5 bits (244), Expect = 2e-20
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
+ +NL+ Y E +VL+DI ++ G + G++G NGAGKSTL+K + ++ +G+I +
Sbjct: 3 VKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIFFD 62
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G+ K + A +E + ++L + LK L R+ E L+
Sbjct: 63 GQ-EKTNNQLGALIEAPAIY-----------MNLSAFDNLKTKALLFGISDKRIHETLEV 110
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
+ L + ++ G+ S G QR+ + ++ E ++ LDEP G+D +++++ LK
Sbjct: 111 IGLAETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLK 170
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPIN 217
+G TILI H L ++ + IIILN+ I Y N
Sbjct: 171 AKGVTILISSHQLHEISKVASQIIILNKGKIRYNRAN 207
dbj|BAA11402| (D78508) YfiL [Bacillus subtilis] >gi|2633155|emb|CAB12660|
(Z99108) similar to ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 311
Score = 99.1 bits (243), Expect = 3e-20
Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 12/220 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILI 59
M+ +N+ Y + ++K I + G G++GPNGAGKST I I +VPH SG I +
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGA----KEWSRVS 115
G V K+ K +QK I P ++ +L + L + K+ + R +
Sbjct: 61 GGYVIGKETAK---AKQKIGI---VPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAA 114
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
E L+ V L + +I SGG +R+ + L+ + + + +DEP VGID S I++
Sbjct: 115 EVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILET 174
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYG 214
++ L G T++ H + +V+ D I I+++ E+IA G
Sbjct: 175 VKQLNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIG 214
pir||S49597 ATP-binding protein - Lactococcus lactis >gi|575301|emb|CAA82547.1|
(Z29363) cytoplasmic protein [Lactococcus lactis]
Length = 225
Score = 99.1 bits (243), Expect = 3e-20
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILIN 60
+ +NL+ Y E +VL+DI ++ G + G++G NGAGKSTL+K + ++ +G+I +
Sbjct: 3 VKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIFFD 62
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
G+ K + A +E + ++L + LK L R+ E L+
Sbjct: 63 GQ-EKTNNQLGALIEAPAIY-----------MNLSAFDNLKTKALLFGISDKRIHETLEV 110
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
+ L + ++ G+ S G QR+ + ++ E ++ LDEP G+D +++++ LK
Sbjct: 111 IGLAETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLK 170
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPIN 217
+G TILI H L ++ + IIILN+ I Y N
Sbjct: 171 AKGVTILISSHQLHEISKVASQIIILNKGKIRYDHAN 207
emb|CAA15259| (AJ235273) FERRIC TRANSPORT ATP-BINDING PROTEIN (afuC) [Rickettsia
prowazekii]
Length = 233
Score = 98.7 bits (242), Expect = 4e-20
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I +N++ + + + V IT +IGPNGAGK+T+++ +L + P SGE++I
Sbjct: 5 IIEFRNVSKKFGNKTPISKVSFIVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEVII 64
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR-VSEAL 118
+ ++ KI YV QK + PI VK+ + L L +++ + E
Sbjct: 65 DRKL------KIGYVPQKFGLTTDIPITVKKFLDL-----------LAPSHFNKNIKEIS 107
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
++L + ++I +LSGGQFQ+V+LA ++ D I LDEP +D S++ ++
Sbjct: 108 SFIDLEHIKKQEISKLSGGQFQKVVLACSIINNPDLIILDEPLQSLDVTSQQEFYQLIHF 167
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINE 218
+ K T+ ++ HDL V + D +I LN + G +E
Sbjct: 168 IRKKLNITVFMISHDLFTVIKNSDQVICLNGHICCSGVPHE 208
sp|P56344|CYSA_CHLVU PROBABLE SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|2224423|dbj|BAA57907| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 98.7 bits (242), Expect = 4e-20
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV 63
+N++ + + L + LE+ G + G++GP+G+GKSTL++ + + P SG I + G+
Sbjct: 6 ENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQD 65
Query: 64 S---KKQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+ K Q ++I +V Q + FP + V E V+ G L++ + + RV+E L+
Sbjct: 66 ATQMKLQDREIGFVFQNYAL---FPHLTVSENVAFG----LEIQKIDSLLKKKRVNELLK 118
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+ L + + +LSGGQ QRV LAR L E + LDEPF +D+ K + L++L
Sbjct: 119 LMQLEKFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLREL 178
Query: 180 KHQ-GKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINE 218
H+ T + V HD S+ E +I++L N ++I G E
Sbjct: 179 HHKISVTTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQE 219
pir||QRECFH ferrichrome-iron transport protein fhuC - Escherichia coli
>gi|145950 (M12486) fhuC [Escherichia coli]
>gi|473810|dbj|BAA05599| (D26562) 'ferrichrome-iron
transport protein fhuC' [Escherichia coli]
Length = 265
Score = 98.7 bits (242), Expect = 4e-20
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEV 63
+N++ +L + L G++TG+IG NG+GKSTL+K + P S GEIL++ +
Sbjct: 15 RNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQP 74
Query: 64 -----SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
SK +K+AY+ Q+ + + V+E V++G Y + GA + +V EA+
Sbjct: 75 LESWSSKAFARKVAYLPQQ--LPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAI 132
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
V L +R + LSGG+ QR +A + Q++ + LDEP +D + ++ ++
Sbjct: 133 SLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHR 192
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKN 224
L + +G T++ V HD++ Y D ++ L E G N++++N
Sbjct: 193 LSQERGLTVIAVLHDINMAARYCDYLVALRGGESDCSGNACGNYARRN 240
gb|AAD35568.1|AE001726_2 (AE001726) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 235
Score = 98.3 bits (241), Expect = 5e-20
Identities = 67/236 (28%), Positives = 118/236 (49%), Gaps = 18/236 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
MI L V Y E K ++D+ LEV G I ++GP+G GK+T++KAIL ++P+ G+I I
Sbjct: 1 MIKVSQLTVRYGELKAVEDLSLEVQRGEILSLVGPSGCGKTTVVKAILGLIPYEGKIEI- 59
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
++ Y QK + + + L + +K + S + E ++
Sbjct: 60 ------FTSRLGYCPQKDVLFDWMTVYENAVLPL-------VLRK--EQPPSNIKELFER 104
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
L +E ++ +LSGG Q++ L R ++ + + LDEPF +D+ + K + L ++
Sbjct: 105 FGLSGFEEKRPYQLSGGMRQKLSLLRAVLSGEELLVLDEPFSSVDAYTRKKLQIWLSEIV 164
Query: 181 HQGK-TILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDNIF 234
H+ K T++++ HD+ + D I+IL +R I FS+ K + D F
Sbjct: 165 HRMKSTVVLITHDVEEAVFLSDRILILSDRPARILKEIRVPFSKPRTIKTFSDPRF 220
emb|CAB73039.1| (AL139076) ABC transport system ATP-binding protein [Campylobacter
jejuni]
Length = 336
Score = 97.9 bits (240), Expect = 7e-20
Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 38/266 (14%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILI 59
MI KNL +Y + V+ D+ LE+ G I I+G +GAGKSTL++ I + + G + +
Sbjct: 1 MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKV 60
Query: 60 NG----EVSKKQLKKI--------------AYVEQKSDIDH-TFPIKVKECVSLGTYTGL 100
++S+K+ K++ A +E+K+ ++ P++ YT
Sbjct: 61 FDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTH-------YTQC 113
Query: 101 KLFQKLGAKEWSRVSEALQKVNL------LDYENRQI-GELSGGQFQRVLLARCLVQEAD 153
K KL KE+ E QKVN LD++N+ ELSGGQ QRV +AR L
Sbjct: 114 KFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPK 173
Query: 154 YIFLDEPFVGIDSISEKIIMDILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNR-ELI 211
+ DE +D + K I++++ + + G T+++V H++ VK+ ++L ++I
Sbjct: 174 ILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQII 233
Query: 212 AYGPINENFSQKN--LKKAYGDNIFI 235
G I+E F + N +K+ G++ F+
Sbjct: 234 GSGAIDELFLRPNAKMKEFLGESDFL 259
gb|AAD36335.1|AE001781_6 (AE001781) phosphate ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 251
Score = 97.9 bits (240), Expect = 7e-20
Identities = 76/237 (32%), Positives = 123/237 (51%), Gaps = 27/237 (11%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH------S 54
+I +N + +Y E +K++ +++ +IT IIGP+G GK+TL+++I + H
Sbjct: 4 IIEIENFSAYYGEKIAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHLPGFRVE 63
Query: 55 GEILING-EVSKKQL------KKIAYVEQKSDIDHTFPIKVKECVSLG-TYTGLKLFQKL 106
G+I G ++ QL K++ V QK FP+ + + V+ G G+K L
Sbjct: 64 GKIYFKGQDIYDPQLDVTEYRKRVGMVFQKPT---PFPMSIYDNVAFGPRIHGVKSKHIL 120
Query: 107 GAKEWSRVSEALQKVNLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFV 162
V E+L+K L D ++ + LSGGQ QR+ +AR L E + I LDEP
Sbjct: 121 D----RIVEESLKKAALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDEPTS 176
Query: 163 GIDSISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINE 218
+D I+ + I +L++L + TI+IV H++ + D I + R ELI YGP E
Sbjct: 177 ALDPIATQRIEKLLEELS-ENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTRE 232
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 hypothetical protein HI0126 -
Haemophilus influenzae (strain Rd KW20) >gi|1573081
(U32698) ferric ABC transporter, ATP-binding protein
(afuC) [Haemophilus influenzae Rd]
Length = 328
Score = 97.9 bits (240), Expect = 7e-20
Identities = 70/228 (30%), Positives = 127/228 (55%), Gaps = 16/228 (7%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV 63
KN+ + + V+ ++ L + G + ++GP+G GK+T+++ + + P SG+I I+GE
Sbjct: 10 KNITKAFGKAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGED 69
Query: 64 SKK---QLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKL-FQKLGAKEWS-RVSEAL 118
K Q + I V Q + FP +S+G G L Q +G +E + RV EAL
Sbjct: 70 VTKSSIQNRDICIVFQSYAL---FPH-----MSIGDNVGYGLKMQGIGKEERAQRVKEAL 121
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ V+L +E+R + ++SGGQ QRV LAR LV + + DEP +D+ + + + +++
Sbjct: 122 ELVDLAGFEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRE 181
Query: 179 LKHQ-GKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKN 224
L+ + G T L V HD ++ D++I++N+ +++ P E + + N
Sbjct: 182 LQQRLGITSLYVTHDQTEAFAVSDEVIVMNKGKIMQKAPAKELYLRPN 229
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN PEB1C
>gi|1072932|pir||C48518 PEB1 5'-region hypothetical
protein C - Campylobacter jejuni >gi|388564 (L13662)
major cell-binding factor receptor [Campylobacter
jejuni]
Length = 242
Score = 97.9 bits (240), Expect = 7e-20
Identities = 76/240 (31%), Positives = 118/240 (48%), Gaps = 7/240 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
MI KN+N +Y + VLK L V G IIGP+G+GKST I+ + + SGE+++
Sbjct: 1 MIELKNVNKYYGTHHVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS-EAL 118
N V + K + + + F + V QK KE + + L
Sbjct: 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKYL 120
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+ V LLD N LSGGQ QRV +AR L + YI DEP +D + + ++D++++
Sbjct: 121 KVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMKE 180
Query: 179 LKHQGK-TILIVHHDLSKVKEYFDDIIILNRELIAYGPI-NENFSQKNLKKAYGDNIFIG 236
+ HQ T+++V H++ KE D II + I I +E FS ++A +F+G
Sbjct: 181 ISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSNPKTERA---RLFLG 237
gi|2649183 (AE001008) branched-chain amino acid ABC transporter, ATP-binding
protein (braG-4) {Methanococcus jannasch [Archaeoglobus
fulgidus]
Length = 236
Score = 97.5 bits (239), Expect = 9e-20
Identities = 73/237 (30%), Positives = 121/237 (50%), Gaps = 18/237 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
M+ T LN Y E +L D+ ++ IT ++GPNG+GKSTL+K+I + HSG++ +
Sbjct: 1 MLRTVKLNAGYKELHILFDVDADIKKNSITAVVGPNGSGKSTLLKSIFGLATVHSGQVFL 60
Query: 60 N-GEVSK-----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
N GE++ + IAY+ Q ++ + V+E + + YT K K R
Sbjct: 61 NGGEITSLPPHTRTKLGIAYLPQTDNVFAN--LTVEENLKIAAYTVDKEEVK------DR 112
Query: 114 VSEALQKV-NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ AL L + R+ G LSGG+ Q + +A LV++A+ + LDEP + +II
Sbjct: 113 IDAALDAFPELRAFMKRKAGTLSGGERQMLAMATALVRKANVLMLDEPTAQLSPKFAEII 172
Query: 173 MDILQDLKHQGK-TILIVHHDLSKVKEYFDDIIILNRELIAY-GPINENFSQKNLKK 227
D + L+ K TIL+V ++ + E D+ +L +A+ G NE + +K
Sbjct: 173 FDRILKLRDDLKLTILLVEQNVQRALEISDNAYLLVSGRVAFNGTANELLEHEKFEK 229
sp|P39456|YCKI_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YCKI
>gi|1805430|dbj|BAA08992| (D50453) homologue of
glutamine transport ATP-binding protein GlnQ of E. coli
[Bacillus subtilis] >gi|2632645|emb|CAB12153| (Z99105)
similar to glutamine ABC transporter (ATP-binding
protein) [Bacillus subtilis] >gi|2632660|emb|CAB12167|
(Z99106) similar to glutamine ABC transporter
(ATP-binding protein) [Bacillus subtilis]
Length = 247
Score = 97.1 bits (238), Expect = 1e-19
Identities = 70/232 (30%), Positives = 126/232 (54%), Gaps = 14/232 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
M+ K LN + EN++LK I +++ G++ I+GP+G+GK+TL++ + + +P+ GE+
Sbjct: 1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAF 60
Query: 60 NG---EVSKK-QLKKIAYVEQKSDID----HTFPIKVK-ECVSLGTYTGLKLFQKLGAKE 110
+ + SKK + I + +KS + H FP + E V G K ++ KE
Sbjct: 61 DDFSIDFSKKVKQADILKLRRKSPMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVRKE 120
Query: 111 WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
+ L KV L D + +LSGGQ QRV +AR L + + + DEP +D
Sbjct: 121 ---AIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVG 177
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIA-YGPINENFS 221
++ +++DL ++G T+++V H++ +E D++I ++ +I GP + FS
Sbjct: 178 EVLKVIKDLANEGWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFS 229
emb|CAB14684| (Z99117) glutamine ABC transporter (ATP-binding protein) [Bacillus
subtilis] >gi|2635206|emb|CAB14701| (Z99118) glutamine
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 242
Score = 97.1 bits (238), Expect = 1e-19
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
MI +N+N Y + VLK I L++ G + IIGP+G+GKSTL++ I + + G + +
Sbjct: 1 MITFQNVNKHYGDFHVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRLESINEGVLTV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDID----HTFPIK-VKECVSLGTYTGLKLFQKLGAKEWSRV 114
NG + I V Q + H +P K V + + L L+ + AKE +R
Sbjct: 61 NGTAINDRKTDINQVRQNIGMVFQHFHLYPHKTVLQNIMLAPVKVLRQSPEQ-AKETARY 119
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
L+KV + D + +LSGGQ QRV +AR L + + + DEP +D ++D
Sbjct: 120 Y--LEKVGIPDKADAYPSQLSGGQQQRVAIARGLAMKPEVMLFDEPTSALDPEMIGEVLD 177
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN 207
+++ L +G T+++V H++ KE D I+ ++
Sbjct: 178 VMKTLAKEGMTMVVVTHEMGFAKEVADRIVFID 210
sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1470
>gi|1074080|pir||F64125 ferric enterobactin transport
ATP-binding protein (fepC) homolog - Haemophilus
influenzae (strain Rd KW20) >gi|1574311 (U32825) iron
chelatin ABC transporter, ATP-binding protein, putative
[Haemophilus influenzae Rd]
Length = 253
Score = 97.1 bits (238), Expect = 1e-19
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 2 INTKNLNVFYN-ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ +NL +Y EN + + + ++ G I ++G NG GKSTL+ +L I P G+I +
Sbjct: 5 LSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEV 64
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+ I +V Q F V + V +G T + F K + ++ +AL
Sbjct: 65 --------YQSIGFVPQF--FSSPFAYSVLDIVLMGRSTHINTFAKPKSHDYQVAMQALD 114
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+NL R+ LSGGQ Q +L+AR + E I LDEP +D ++ I++ +L DL
Sbjct: 115 YLNLTHLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDL 174
Query: 180 -KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNL 225
+ Q T++ H ++V + ++LN++ +G + +NL
Sbjct: 175 AQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFKFGETRNILTSENL 221
pir||I40452 ABC-type transport system probable ATP binding subunit - Bacillus
subtilis >gi|666983|emb|CAA54726| (X77636) putative ATP
binding subunit [Bacillus subtilis]
Length = 247
Score = 97.1 bits (238), Expect = 1e-19
Identities = 70/232 (30%), Positives = 126/232 (54%), Gaps = 14/232 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
M+ K LN + EN++LK I +++ G++ I+GP+G+GK+TL++ + + +P+ GE+
Sbjct: 1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAF 60
Query: 60 NG---EVSKK-QLKKIAYVEQKSDID----HTFPIKVK-ECVSLGTYTGLKLFQKLGAKE 110
+ + SKK + I + +KS + H FP + E V G K ++ KE
Sbjct: 61 DDFSIDFSKKVKQADILKLRRKSGMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVRKE 120
Query: 111 WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
+ L KV L D + +LSGGQ QRV +AR L + + + DEP +D
Sbjct: 121 ---AIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVG 177
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIA-YGPINENFS 221
++ +++DL ++G T+++V H++ +E D++I ++ +I GP + FS
Sbjct: 178 EVLKVIKDLANEGWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFS 229
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF [Achromobacter
cycloclastes] >gi|4127274|emb|CAA75427| (Y15161)
cytoplasmic protein [Achromobacter cycloclastes]
Length = 299
Score = 96.7 bits (237), Expect = 2e-19
Identities = 70/219 (31%), Positives = 113/219 (50%), Gaps = 14/219 (6%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGEV--SKKQLKKI 71
+ LK + L + PGR ++G NGAGKST++K +L ++P SGE+ + G S ++
Sbjct: 18 EALKSVSLALEPGRRAALLGHNGAGKSTMMKIVLGLIPFDSGEVSVCGSAPGSPAARTQV 77
Query: 72 AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQI 131
AY+ P V +L L+ + L + + +E L +V L R+I
Sbjct: 78 AYL----------PENVAFHPALTGEEQLRHYLALRGENPKQATELLARVGLGHAARRRI 127
Query: 132 GELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHH 191
G S G QRV LA+ L+ + LDEP G+D +S + D+L L +G IL+ H
Sbjct: 128 GTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYDLLDGLAAEGTAILLSSH 187
Query: 192 DLSKVKEYFDDIIILN-RELIAYGPINENFSQKNLKKAY 229
L++V+ D I+IL+ EL+A G + + ++ L A+
Sbjct: 188 VLTEVEARTDSILILSGGELVAEGTLADLRTRAALPVAF 226
gi|2688689 (AE001175) ABC transporter, ATP-binding protein [Borrelia
burgdorferi]
Length = 309
Score = 96.7 bits (237), Expect = 2e-19
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
MIN + + Y L ++ +V G + GI+GPNGAGKSTLIK + + P G + I
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 60 NG----EVSKKQLKKIAYVEQKSDIDHTFP-IKVKECVS-LGTYTGLKLFQKLGAKEWSR 113
G E SK+ L++I YV +K + +P + VKE + + G+K +K
Sbjct: 61 FGKDIVEHSKEILQQIGYVPEKLAL---YPELSVKEYLKFISEIKGVKKLKK-------E 110
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ + L + E++ I +LS G QRV +A L+ + LDEP G+D
Sbjct: 111 IDRVISIFKLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFK 170
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKK 227
+ L++L + TIL H LS+V+ III+N +I EN + LK+
Sbjct: 171 EFLRELAKE-STILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKE 223
gi|2650561 (AE001100) nitrate ABC transporter, ATP-binding protein (nrtC-1)
[Archaeoglobus fulgidus]
Length = 243
Score = 96.7 bits (237), Expect = 2e-19
Identities = 66/213 (30%), Positives = 108/213 (49%), Gaps = 15/213 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI K ++ F+ E K L + EV G IIGP+G GKSTL+ + ++ P GE+L+
Sbjct: 1 MITVKGISKFFGELKALDGVSFEVEDGETCAIIGPSGCGKSTLLLIMAGLLKPSEGEVLV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIK-VKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
+ LK A + Q + FP K V + V+LG LK+ E RV+ L
Sbjct: 61 DDRAVNSPLKNAALILQDFGL---FPWKTVYDNVALG----LKIRGFSRRAERERVTALL 113
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
+K L +E +LSGG QRV +AR + E + +DEP +D++S + + + L +
Sbjct: 114 EKFGLKGFEKSYPKQLSGGMKQRVAIARAIAIEPQILLMDEPLSSLDALSREEMQNFLLN 173
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELI 211
L + KT +++ V ++ + L R+++
Sbjct: 174 LWKETKTTMVL------VTHSIEEAVFLGRKIV 200
gb|AAD35283.1|AE001704_4 (AE001704) iron(III) ABC transporter, ATP-binding protein, putative
[Thermotoga maritima]
Length = 258
Score = 96.3 bits (236), Expect = 2e-19
Identities = 62/210 (29%), Positives = 109/210 (51%), Gaps = 9/210 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
M+ +NL+ Y K+L ++ G + I+GPNGAGKSTL+K I I+ G + +
Sbjct: 1 MLRIRNLSFSYRNKKILDNVTFSAQKGELIAILGPNGAGKSTLLKCIAGILKCQGVEIFS 60
Query: 61 G---EVSKKQLKKIA-YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
+ +++ L +I YV Q+ D + V + LG + + ++ V+
Sbjct: 61 KPLEQYTRRDLARIVGYVPQRIDPGM---LNVYNLILLGRKPYVSVSPS--KEDIEIVNR 115
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
++++NL ++ LSGG+ Q+V +AR LVQE + + LDEP +D ++ IM+I+
Sbjct: 116 VVERLNLQHLVFQRAKNLSGGELQKVSIARALVQEPEILLLDEPTNNLDPKNQIEIMEIV 175
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIIL 206
QD K L+V H+++ + D I +
Sbjct: 176 QDFVKSRKMALVVMHEINLALRFADRFIFM 205
dbj|BAA30009| (AP000004) 324aa long hypothetical resistance ATP-binding protein
[Pyrococcus horikoshii]
Length = 324
Score = 96.3 bits (236), Expect = 2e-19
Identities = 68/238 (28%), Positives = 122/238 (50%), Gaps = 17/238 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I +NL Y + + ++ I +V G I +GPNGAGK+T + + ++ P SG ++
Sbjct: 7 IIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIVA 66
Query: 61 G----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G + S++ KKI V Q +D + G GLK G + ++ E
Sbjct: 67 GHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIH-GRIYGLK-----GQELKKKIEE 120
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L+ V L ++++RQ+ SGG +R+ +AR L+ E + +FLDEP +G+D + I + +
Sbjct: 121 LLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYI 180
Query: 177 QDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+ +K + TI + H + + ++ D I I++ +G I + + LKK G++I
Sbjct: 181 KTMKEEHDMTIFLTTHYMDEAEQLADRIAIID-----HGKIIAEGTAEELKKLVGNDI 233
pir||A64409 ferric enterobactin transport ATP-binding protein homolog -
Methanococcus jannaschii
Length = 290
Score = 96.3 bits (236), Expect = 2e-19
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 26/230 (11%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILI 59
M+ T+NL+V Y V++ I LE+ G I IIGPNGAGKSTL+K I + P G + +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGL-----------KLFQKLGA 108
NG KKI ++ K D+ + + E V+ G TG LF +L
Sbjct: 61 NG-------KKIHDLKPK-DLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTE 112
Query: 109 KEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS-- 166
++ + E+ + VN + E+S G+ Q++++AR L QE + LDEP +D+
Sbjct: 113 RDKKIIIESARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKH 172
Query: 167 -ISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYG 214
I +++ L D K+ I++ HD+ D + +I N ++IAYG
Sbjct: 173 KIELTLLLRKLADXKN--LAIVVTLHDIELALRIADKMALIKNHKVIAYG 220
gi|2967534 (U64516) unknown [Shigella dysenteriae]
Length = 256
Score = 96.0 bits (235), Expect = 3e-19
Identities = 74/250 (29%), Positives = 128/250 (50%), Gaps = 24/250 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEI-L 58
MI+ +NL ++ ++ L G I I+GPNGAGKSTL++ + + P SGE L
Sbjct: 1 MISAQNLVYSLQGRRLTDNVSLTFPGGEIVAILGPNGAGKSTLLRQLTGYLQPDSGECRL 60
Query: 59 INGEVSKKQLKKIA--YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
N +++ + ++A + + FP V+E + +G + + G ++ +E
Sbjct: 61 FNKPLNEWSITELAKHRAVMRQNSHMAFPFSVQEVIQMGRHP-----HRTGNQD----NE 111
Query: 117 ALQKVNLLDYE---NRQIGELSGGQFQRVLLARCLVQ------EADYIFLDEPFVGIDSI 167
Q + L D + NR +LSGG+ QRV LAR LVQ ++FLDEP +D
Sbjct: 112 TAQIMALCDCQALANRDYRQLSGGEQQRVQLARLLVQLWEPTPSPKWLFLDEPTSALDIH 171
Query: 168 SEKIIMDILQDLKHQGK-TILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNL 225
++ + +L+ L H+ + + V HDL+ Y D I+++ + ++IA G + +Q+ L
Sbjct: 172 HQQHLFRLLRQLVHERQFNVCCVLHDLNLAARYADRIVLMQKGKVIANGKPQDVLTQQEL 231
Query: 226 KKAYGDNIFI 235
YG +I +
Sbjct: 232 TMLYGADITV 241
gi|2194195 (U61158) GdmF [Staphylococcus gallinarum]
Length = 231
Score = 96.0 bits (235), Expect = 3e-19
Identities = 64/231 (27%), Positives = 123/231 (52%), Gaps = 16/231 (6%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILIN 60
I T+ L + + +LKDI L+V P + G++G NGAGKSTL+K I I+P +G++ ++
Sbjct: 6 IETQKLTKQFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTNGDVYLD 65
Query: 61 GE-VSKKQLKKI-AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
G +++++L I + +E +H L LK+ ++S + + L
Sbjct: 66 GSPLTRQELTNIGSLIESPPTYNH-----------LSAQDNLKVVALNENIDFSEIPKVL 114
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
VNL +++ S G QR+ +A L+++ + LDEP G+D + + D+L++
Sbjct: 115 DLVNLDVDPKKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRDLLKN 174
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
L +++I H LS++++ D I I++ + Y +N + +NL++ +
Sbjct: 175 LTKANTSVIISSHILSEIQQLADHIGIIHNGKLEYQ--EKNKTDENLEEIF 223
sp|P44656|Y354_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI0354
>gi|1075067|pir||B64063 nitrate transporter ATPase
component (nasD) homolog - Haemophilus influenzae
(strain Rd KW20) >gi|1573323 (U32720) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 240
Score = 96.0 bits (235), Expect = 3e-19
Identities = 60/207 (28%), Positives = 110/207 (52%), Gaps = 12/207 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
M+ ++L++ +N + + + L ++P ++G +G GKSTL++ + I ++
Sbjct: 1 MVRIQDLSLAFNGQTLFEHLNLTLLPNEWVSLLGSSGVGKSTLLRLLAGIETQG---MVQ 57
Query: 61 GEVSKKQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G++ + +IA++ QK + +P + + + V L LF + K + L+
Sbjct: 58 GKILFEPKVRIAWLPQKETL---YPWLSIVDNVQLQAV----LFGRKSVKTTEKAKMLLE 110
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
KV + + ++ +LSGGQ QRV LAR L+QE D I LDEPF +D+IS + D+ +L
Sbjct: 111 KVGMAAHWHKPCSQLSGGQKQRVALARTLMQEVDLILLDEPFSALDAISRHQLQDLAFEL 170
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIIL 206
+ K++L+V HD + I +L
Sbjct: 171 L-EDKSVLLVTHDPQEALRLSQRIFVL 196
sp|P41076|GLTL_ECOLI GLUTAMATE/ASPARTATE TRANSPORT ATP-BINDING PROTEIN GLTL >gi|624632
(U10981) GltL [Escherichia coli]
>gi|1651271|dbj|BAA35304| (D90705) Glutamate/aspartate
transport atp-binding protein gltL. [Escherichia coli]
>gi|1778570 (U82598) glutamate/aspartate transport
ATP-binding protein [Escherichia coli] >gi|1786872
(AE000169) ATP-binding protein of glutamate/aspartate
transport system [Escherichia coli]
Length = 241
Score = 96.0 bits (235), Expect = 3e-19
Identities = 63/213 (29%), Positives = 114/213 (52%), Gaps = 9/213 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
MI KN++ +Y +VL D EV G + + GP+G+GKSTLIK + + P GEI +
Sbjct: 1 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60
Query: 60 NGEVSKKQLKKIAYVEQKSDID----HTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+G V + +A + + + FP + + E ++L LK K A+E +
Sbjct: 61 DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKR-DKAPARE--KA 117
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+ L++V L + N+ +LSGGQ QRV +AR L + + DEP +D ++D
Sbjct: 118 LKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLD 177
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN 207
++ +L ++G T+++V H++ ++ + +I ++
Sbjct: 178 VMVELANEGMTMMVVTHEMGFARKVANRVIFMD 210
sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNC
>gi|216591|dbj|BAA14262| (D90227) ATP-binding protein
[Escherichia coli] >gi|536950 (U14003) HisP-like
nucleotide binding protein (ATP-binding protein)
[Escherichia coli] >gi|1790544 (AE000482) ATP-binding
component of phosphonate transport [Escherichia coli]
Length = 262
Score = 96.0 bits (235), Expect = 3e-19
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 25/250 (10%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
+I + L +N+++ L + L + G + ++GP+G+GKSTL++ + ++ +G+ +
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLI--TGDKSVG 61
Query: 61 GEVS----------------KKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKL-- 102
+ +K Y+ Q+ ++ + + V E V +G
Sbjct: 62 SHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNR--LSVLENVLIGALGSTPFWR 119
Query: 103 --FQKLGAKEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEP 160
F ++ R +AL +V ++ + ++++ LSGGQ QRV +AR L+Q+A I DEP
Sbjct: 120 TCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEP 179
Query: 161 FVGIDSISEKIIMDILQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINEN 219
+D S +I+MD L+D+ ++ G T+++ H + Y + I+ L + + Y ++
Sbjct: 180 IASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239
Query: 220 FSQKNLKKAY 229
F + Y
Sbjct: 240 FDNERFDHLY 249
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0873 >gi|2826343
(U67531) ferric enterobactin transport ATP-binding
protein [Methanococcus jannaschii]
Length = 290
Score = 95.6 bits (234), Expect = 4e-19
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 22/228 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILI 59
M+ T+NL+V Y V++ I LE+ G I IIGPNGAGKSTL+K I + P G + +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGL-----------KLFQKLGA 108
NG KKI ++ K D+ + + E V+ G TG LF +L
Sbjct: 61 NG-------KKIHDLKPK-DLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTE 112
Query: 109 KEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
++ + E+ + VN + E+S G+ Q++++AR L QE + LDEP +D+
Sbjct: 113 RDKKIIIESARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKH 172
Query: 169 EKIIMDILQDL-KHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYG 214
+ + +L+ L + I++ HD+ D + +I N ++IAYG
Sbjct: 173 KIELTLLLRKLADEKNLAIVVTLHDIELALRIADKMALIKNHKVIAYG 220
gb|AAC45331.1| (U97348) ATP-binding protein homolog [Lactobacillus fermentum]
Length = 249
Score = 95.6 bits (234), Expect = 4e-19
Identities = 70/229 (30%), Positives = 115/229 (49%), Gaps = 12/229 (5%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAI-LNIVPHSGE-------I 57
N+N + VLK+ LE G+ T ++GP+G+GKST+++++ L ++P SG+ +
Sbjct: 5 NINKSFGNKNVLKNTTLEFPAGKTTVMVGPSGSGKSTILRSLNLLVMPESGQYDFDEHHL 64
Query: 58 LINGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW-SRVSE 116
+ ++S K K+A ++ + + + + V G K KE +
Sbjct: 65 DFSQKISNKD--KLAIRQETGMVFQDYNLFPNKTVLGNIIEGPTQVLKQPKKEAIANAHN 122
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L KV L DY + ELSGGQ QRV +AR L YI LDEP +D E ++ +L
Sbjct: 123 LLTKVGLADYGDAYPNELSGGQAQRVAIARALAMSPKYILLDEPTSALDPELELSVLHVL 182
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKN 224
L + ++++IV H++ K D II + N E++ G E F+ N
Sbjct: 183 LQLAAEKQSMVIVTHNMVFAKHVADKIIFVENGEILYDGTPEEFFAPDN 231
gb|AAD25906.1|AF069302_15 (AF069302) ABC transporter subunit PenL [Pediococcus pentosaceus]
>gi|5091682|gb|AAD39629.1|AF033858_12 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 313
Score = 95.2 bits (233), Expect = 5e-19
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 34/237 (14%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEIL-- 58
++ +N ++ KV+ D+ + G+I ++GPNGAGK+T+I+ I +++ ++
Sbjct: 7 ILTLSKVNKSISQKKVINDVSFSLEKGKILALLGPNGAGKTTIIRLITSLIEQDSGVISV 66
Query: 59 INGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS------ 112
NG+++ +++ V+ ++ Y L +F+ L K W
Sbjct: 67 FNGDINPSNIRQNISVQNDGNL----------------YENLTIFENL--KIWGGFYEIP 108
Query: 113 ------RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS 166
++SE + + + N ++GELS G Q+VL+ R L+ + LDEP G+D
Sbjct: 109 EDHLEVKISELTSRFEISERLNSKVGELSKGMKQKVLIIRALLTNPKLLILDEPTSGLDP 168
Query: 167 ISEKIIMDILQD-LKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFS 221
++ IL + +K TI++ H L ++ DD++ILN+ E++ +G + S
Sbjct: 169 YMIDLLTKILTEYVKRHETTIIMATHQLLGLESIADDVLILNKGEVVVHGKTTQLIS 225
gi|4155205 (AE001497) putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 95.2 bits (233), Expect = 5e-19
Identities = 71/241 (29%), Positives = 124/241 (50%), Gaps = 15/241 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ ++LN + K++ D+ LEV G + G++GPNGAGK+T I ++ P G + +
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYL 62
Query: 60 NG-EVSKKQLKK-----IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
N +++K L K I Y+ Q+S I + V+E ++L G F+ E +
Sbjct: 63 NDVDLAKYPLHKRSNLGIGYLPQESSIFKE--LSVEENLALA---GESTFKNSKESE-EK 116
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ L N+ R+ LSGG+ +RV +AR L++ ++ LDEPF G+D I+ I
Sbjct: 117 MESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQ 176
Query: 174 DILQDLKHQGKTILIVHHDLSK-VKEYFDDIIILNRELIAYGPINENFSQKNLKKAY-GD 231
I++ L +LI H++ + + +I + L+A G NE + ++K Y G+
Sbjct: 177 RIIESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYENALVRKYYLGE 236
Query: 232 N 232
N
Sbjct: 237 N 237
gi|3044094 (AF055999) ATPase component [Pseudomonas aeruginosa]
Length = 255
Score = 95.2 bits (233), Expect = 5e-19
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 20/248 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEILI 59
M+ +NL++ VL+ ++LE+ PG + G++GPNGAGKSTL+ A+ + P G +L+
Sbjct: 1 MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGLVLL 60
Query: 60 NGE-----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLG-AKEWSR 113
+ + +++A + Q S + FP V+ V G +L G ++
Sbjct: 61 DERGLDDWPGVARAQRLAVLPQSSSLGFAFP--VEAVVGFG-----RLPHSSGRERDVQI 113
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQ-----EADYIFLDEPFVGIDSIS 168
V+EAL + R LSGG+ QRV LAR L Q + LDEP +D +
Sbjct: 114 VAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDPLH 173
Query: 169 EKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKK 227
+ + + D +G ++L++ HDL+ Y D +++L N G E + L+
Sbjct: 174 QHTTLQAVHDFARRGASVLVILHDLNLAARYCDRLLLLQNGRPHLLGTPEEVLRPEPLRA 233
Query: 228 AYGDNIFI 235
+G + +
Sbjct: 234 VFGLEVLV 241
sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1367
>gi|2129296|pir||F64470 sulfate permease (cysA) -
Methanococcus jannaschii >gi|1592011 (U67576) sulfate
transport ATP-binding protein (cysA) [Methanococcus
jannaschii]
Length = 297
Score = 95.2 bits (233), Expect = 5e-19
Identities = 79/235 (33%), Positives = 123/235 (51%), Gaps = 19/235 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
M+ NL+ + + K LK++ E I I+GP+GAGKS LIK I I+ P SG I++
Sbjct: 1 MLKVNNLSKIWKDFK-LKNVSFE-IDREYCVILGPSGAGKSVLIKCIAGILKPDSGRIIL 58
Query: 60 NGEVSKK---QLKKIAYVEQKSDIDHTFPIK-VKECVSLGTYTGLKLFQKLGAKEWSR-V 114
NGE + + + YV Q + FP K V + ++ G + +K+ E R V
Sbjct: 59 NGEDITNLPPEKRNVGYVPQNYAL---FPNKNVYKNIAYGL-----IIKKVNKLEIDRKV 110
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
E + +N+ NR + LSGG+ QRV LAR L+ + LDEP +D ++ I+
Sbjct: 111 KEIAEFLNISHLLNRDVKTLSGGEQQRVALARALILNPSILLLDEPTSAVDIKIKESIIS 170
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKA 228
L+ +KH +L + HDL++ + + + I +N ELIA+G + KN K A
Sbjct: 171 ELKKIKH--IPVLHITHDLAEARTLGEKVGIFMNGELIAFGDKSILKKPKNKKVA 223
sp|P07655|PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB >gi|72455|pir||BVECZB
phosphate transport protein pstB - Escherichia coli
>gi|42398|emb|CAA26509| (X02723) pstB gene product (aa
1-257) [Escherichia coli] >gi|147259 (K01992) peripheral
membrane protein B [Escherichia coli] >gi|290573
(L10328) peripheral membrane protein B [Escherichia
coli] >gi|1790162 (AE000449) ATP-binding component of
high-affinity phosphate-specific transport system
[Escherichia coli]
Length = 257
Score = 95.2 bits (233), Expect = 5e-19
Identities = 74/244 (30%), Positives = 122/244 (49%), Gaps = 14/244 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKA---ILNIVPH---SG 55
I +NLN +Y + LK+I L++ ++T IGP+G GKSTL++ + + P G
Sbjct: 11 IQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEG 70
Query: 56 EILINGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW-SRV 114
EIL++G+ + IA + K + P + G++LF+KL + RV
Sbjct: 71 EILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERV 130
Query: 115 SEALQKVNLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
AL K L + ++ + LSGGQ QR+ +AR + + + LDEP +D IS
Sbjct: 131 QWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTG 190
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN-RELIAYGPINENFSQKNLKKAY 229
I +++ +LK Q T++IV H++ + D + ELI + ++ F+ K KK
Sbjct: 191 RIEELITELK-QDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFT-KPAKKQT 248
Query: 230 GDNI 233
D I
Sbjct: 249 EDYI 252
dbj|BAA22864| (D89963) peripheral membrane protein [Enterobacter cloacae]
Length = 257
Score = 94.8 bits (232), Expect = 6e-19
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKA---ILNIVPH---SG 55
I ++LN +Y + LK+I L++ ++T IGP+G GKSTL++ + ++ P G
Sbjct: 11 IQVRDLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMYSLYPEQRAEG 70
Query: 56 EILINGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW-SRV 114
EI+++GE Q + IA + K + P + G++LF+KL + RV
Sbjct: 71 EIILDGENILTQAQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERV 130
Query: 115 SEALQKVNLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
AL K L + ++ + LSGGQ QR+ +AR + + + LDEP +D IS
Sbjct: 131 QWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTG 190
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN-RELIAYGPINENFSQKNLKK 227
I +++ +LK Q T++IV H++ + D + ELI + + F++ K+
Sbjct: 191 RIEELITELK-QDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSDTDALFTRPAKKQ 247
gb|AAD07765.1| (AE000584) ABC transporter, ATP-binding protein [Helicobacter
pylori 26695]
Length = 240
Score = 94.8 bits (232), Expect = 6e-19
Identities = 71/241 (29%), Positives = 123/241 (50%), Gaps = 15/241 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ ++LN + K++ D+ LEV G + G++GPNGAGK+T I ++ P G + +
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYL 62
Query: 60 NG-EVSKKQLKK-----IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
N ++K L K I Y+ Q+S I + V+E ++L G F+ E +
Sbjct: 63 NDVNLAKYPLHKRSNLGIGYLPQESSIFKE--LSVEENLALA---GESTFKNSKESE-EK 116
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ L N+ R+ LSGG+ +RV +AR L++ ++ LDEPF G+D I+ I
Sbjct: 117 MESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQ 176
Query: 174 DILQDLKHQGKTILIVHHDLSK-VKEYFDDIIILNRELIAYGPINENFSQKNLKKAY-GD 231
I++ L +LI H++ + + +I + L+A G NE + ++K Y G+
Sbjct: 177 KIIESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYENALVRKYYLGE 236
Query: 232 N 232
N
Sbjct: 237 N 237
emb|CAA69520| (Y08257) putative ABC transporter [Sulfolobus solfataricus]
Length = 246
Score = 94.8 bits (232), Expect = 6e-19
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 11/234 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ K+L Y + +VL+ I V G I ++GPNGAGK+T +K + ++ P GE+ +
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G + KI + P + + L ++ F KL + ++V E +
Sbjct: 65 IGYKVPNECGKIR------ERIGVMPQDYQGFLDLTVRENIEYFVKLYNGKETQVDELIS 118
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
++L +N+++ LSGG +RV +A + +FLDEP VG+D + + +I++ +
Sbjct: 119 LLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMM 178
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINE---NFSQKNLKKAY 229
K++G TI + H L + ++ D + IL +LI +E F NL+ AY
Sbjct: 179 KNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAY 232
sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YHDZ
>gi|606212|gb|AAA58075.1| (U18997) ORF_o252 [Escherichia
coli] >gi|1789672 (AE000406) putative ATP-binding
component of a transport system [Escherichia coli]
Length = 252
Score = 94.8 bits (232), Expect = 6e-19
Identities = 65/225 (28%), Positives = 117/225 (51%), Gaps = 4/225 (1%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILI 59
MI +N+N +Y + VLK+I L V PG + GP+G+GKST I+ I ++ H G I++
Sbjct: 12 MITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVV 71
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLF-QKLGAKEWSRVS-EA 117
+G + ++ I V Q+ + L T ++ +K+ KE ++
Sbjct: 72 DGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHY 131
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L++V + ++ ++ G++SGGQ QRV +AR L + + DEP +D K ++D +
Sbjct: 132 LERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMI 191
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFS 221
L G T+L V H++ + D +I ++R E++ +E F+
Sbjct: 192 GLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFA 236
emb|CAB49582.1| (AJ248285) daunorubicin resistance ATP-binding protein (drrA-1)
[Pyrococcus abyssi]
Length = 328
Score = 94.4 bits (231), Expect = 8e-19
Identities = 68/238 (28%), Positives = 119/238 (49%), Gaps = 17/238 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I +NL Y + +K I +V G I +GPNGAGK+T + + ++ P SG+ ++
Sbjct: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
Query: 61 GEVSKKQ----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G K+ KKI V Q +D + G GLK G + ++ E
Sbjct: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIH-GMIYGLK-----GRELKEKIEE 117
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L+ V L +++R + SGG +R+ +AR L+ E + +FLDEP +G+D + I + +
Sbjct: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
Query: 177 QDLKHQGK-TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+ +K + + TI + H + + ++ D I I++ +G I + + LKK G++I
Sbjct: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIID-----HGKIIAEGTSEELKKLVGNDI 230
pir||D35718 phnC protein - Escherichia coli >gi|147196 (J05260) HisP-like
nucleotide binding protein (phnC) [Escherichia coli]
Length = 262
Score = 94.4 bits (231), Expect = 8e-19
Identities = 60/250 (24%), Positives = 121/250 (48%), Gaps = 25/250 (10%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
+I + L +N+++ L + L + G + ++GP+G+GKSTL++ + ++ +G+
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLI--TGDKSAG 61
Query: 61 GEVS----------------KKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKL-- 102
+ +K Y+ Q+ ++ + + V E V +G
Sbjct: 62 SHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNR--LSVLENVLIGALGSTPFWR 119
Query: 103 --FQKLGAKEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEP 160
F ++ R +AL +V ++ + ++++ LSGGQ QRV +AR L+Q+A I DEP
Sbjct: 120 TCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEP 179
Query: 161 FVGIDSISEKIIMDILQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINEN 219
+D S +I+MD L+D+ ++ G T+++ H + Y + I+ L + + Y ++
Sbjct: 180 IASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239
Query: 220 FSQKNLKKAY 229
F + Y
Sbjct: 240 FDNERFDHLY 249
emb|CAA61303| (X88849) ceuD [Campylobacter coli]
Length = 251
Score = 94.0 bits (230), Expect = 1e-18
Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI +N+ Y++ ++ D+ ++ G+IT IIG NGA KSTL+ ++ P SG I I
Sbjct: 1 MIRLQNITKCYDQKAIISDLSIDFHKGKITSIIGANGAEKSTLLALASRLIKPDSGRIYI 60
Query: 60 NG---EVSKKQ--LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
+G + K+Q +KI+ ++Q++ I+ +KV+E V+ G + + ++ + ++
Sbjct: 61 DGMNLALYKEQDLAQKISILKQQNHIN--VRLKVEELVAFGRFPHSQ--GRINLNDKMKI 116
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
EAL+ + L N + G QR + + Q+ ++I DEP +D IM
Sbjct: 117 DEALEDMGLNTLRN-NFRHVKWGTKQRAFIRIIIAQDTEFIMFDEPLNNLDMKHSVQIMQ 175
Query: 175 ILQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDN 232
+++ L K K+I +V HD++ Y D+II L N +L+ G +E + L++ Y +
Sbjct: 176 LMKRLVKDFNKSIAVVLHDINFASIYSDEIIALKNGKLLKQGLKDEIIQEDVLRQIYDMD 235
Query: 233 I 233
I
Sbjct: 236 I 236
gb|AAF12223.1|AE001862_49 (AE001862) amino acid ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 309
Score = 93.6 bits (229), Expect = 1e-18
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 23/219 (10%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI +N+ + VL+DI L V G + +IGP+G GKSTL++ + ++ P SG+I +
Sbjct: 1 MIEFQNVIKSFGGPAVLQDISLTVPTGELVILIGPSGCGKSTLLRLVNRLLEPTSGDIRV 60
Query: 60 NGEVSKKQ-----LKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSR 113
G +Q +++ YV Q + FP + V+E V L G +R
Sbjct: 61 GGVSVLEQDPVALRRRLGYVIQSVGL---FPHLTVQENVELVPSIS-------GVGRETR 110
Query: 114 VSEALQKVNLL-----DYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
+ AL+ ++L+ Y R +LSGGQ QRV +AR L + +Y+ +DEPF +D I+
Sbjct: 111 AARALELLSLMGLEPGQYAGRYPRQLSGGQQQRVGIARALAADPEYLLMDEPFSALDPIT 170
Query: 169 EKIIMDILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIIL 206
+ + LK + GKTI+ V HD+ + D I +L
Sbjct: 171 RARLQEQFLTLKREIGKTIVFVTHDVDEAVRLGDRICVL 209
dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia coli]
Length = 343
Score = 93.6 bits (229), Expect = 1e-18
Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 1 MINTKNLNVFYNEN----KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV--PHS 54
MI N+ +++ + L ++ L V G+I G+IG +GAGKSTLI+ + N++ P
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCV-NLLERPTE 59
Query: 55 GEILINGE----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE 110
G +L++G+ +S+ +L K Q I F + V L+L +
Sbjct: 60 GSVLVDGQELTTLSESELTKAR--RQIGMIFQHFNLLSSRTVFGNVALRLELDNTPKDEV 117
Query: 111 WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
RV+E L V L D + LSGGQ QRV +AR L + DE +D + +
Sbjct: 118 KRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTR 177
Query: 171 IIMDILQDLKHQ-GKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFS 221
I+++L+D+ + G TIL++ H++ VK D + +I N ELI ++E FS
Sbjct: 178 SILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS 230
gi|3978166 (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 93.6 bits (229), Expect = 1e-18
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 16/225 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
++ +LN+ + KVL+++ L V I ++G +G GK+TL+KAI ++P G+I +
Sbjct: 3 VLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLPIEQGDIHL 62
Query: 60 NGEVSKKQL---KKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
GE K + ++I + Q + FP + V + + G K+ QK +
Sbjct: 63 AGECLKSKAVEERQIGLIFQDYAL---FPHLTVADNIQFGLSKLPKVQQK------AITE 113
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE-KIIMD 174
+ L V+L +E+R ELSGGQ QRV +AR L + + + LDEPF IDS + +I +
Sbjct: 114 KMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFSNIDSQTRYAMIQE 173
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINE 218
I Q LK Q + V H + + D I ++++ ++I +G NE
Sbjct: 174 IKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE 218
sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|1552775 (U70214) ATP-binding protein
[Escherichia coli] >gi|1786398 (AE000129) ATP-binding
component of a transporter [Escherichia coli]
Length = 343
Score = 93.6 bits (229), Expect = 1e-18
Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 1 MINTKNLNVFYNEN----KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV--PHS 54
MI N+ +++ + L ++ L V G+I G+IG +GAGKSTLI+ + N++ P
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCV-NLLERPTE 59
Query: 55 GEILINGE----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE 110
G +L++G+ +S+ +L K Q I F + V L+L +
Sbjct: 60 GSVLVDGQELTTLSESELTKAR--RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEV 117
Query: 111 WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
RV+E L V L D + LSGGQ QRV +AR L + DE +D + +
Sbjct: 118 KRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTR 177
Query: 171 IIMDILQDLKHQ-GKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFS 221
I+++L+D+ + G TIL++ H++ VK D + +I N ELI ++E FS
Sbjct: 178 SILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS 230
emb|CAA63958| (X94292) cbiO [Methanobacterium thermoautotrophicum]
Length = 277
Score = 93.6 bits (229), Expect = 1e-18
Identities = 78/234 (33%), Positives = 114/234 (48%), Gaps = 22/234 (9%)
Query: 1 MINTKNLNVFYNEN-KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
+I N+ Y + + LK I G + ++GPNGAGKSTL I+ P SG++L
Sbjct: 3 IIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGKVL 62
Query: 59 ING---EVSKKQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE- 110
++G + SK L +K+ V Q D D F +V E V+ G +G E
Sbjct: 63 VDGKEIDYSKSGLIKVRQKVGIVFQNPD-DQLFAPRVDEDVAFGPLN-------MGLDED 114
Query: 111 --WSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
RV +AL+KV + LSGG+ +RV +A L + D + LDEP G+D
Sbjct: 115 EVEERVKDALRKVGMSGTRTDP-HHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRG 173
Query: 169 EKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFS 221
I+ +L +L +G TI+I HD+ Y D I II E+I+ G + FS
Sbjct: 174 ASQILRLLHELNEEGMTIIISTHDVDLAPLYSDRIYIISGGEIISEGTPGDVFS 227
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA
>gi|1177253|emb|CAA61074| (X87807) putative ATP-binding
protein of ABC-type [Bacillus subtilis]
>gi|2226115|emb|CAA74409.1| (Y14077) Hypothetical
protein [Bacillus subtilis] >gi|2633340|emb|CAB12844|
(Z99109) ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 247
Score = 93.6 bits (229), Expect = 1e-18
Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 8/239 (3%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+++ K+L Y N VLK++ + P +I G+IG NGAGKST I+ I+ ++ PH G I +
Sbjct: 3 LLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIEL 62
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW--SRVSEA 117
NG+ + + Y Q + I T P+ +E ++L + L +KE R+
Sbjct: 63 NGKTFAEDPE--GYRSQFTYIPET-PVLYEE-LTLMEHLELTAMAYGLSKETMEKRLPPL 118
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L++ + S G Q+V++ + E +DEPF+G+D ++ +++ +
Sbjct: 119 LKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDEPFLGLDPLAINALLERMN 178
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDNIFI 235
+ K G ++L+ H L+ + Y D IIL N E+ A G ++E Q +K A D++++
Sbjct: 179 EAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYL 237
dbj|BAA82350.1| (AB029612) ORF1 [Lactobacillus gasseri]
Length = 304
Score = 93.2 bits (228), Expect = 2e-18
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 24/240 (10%)
Query: 2 INTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
I KN++ Y VLKDI L++ G I+G +G+GKST++K +++ P G++ +
Sbjct: 70 IEYKNVDYSYGYGTDVLKDINLKISQGEKLTIVGMSGSGKSTMVKLLVDFFSPSKGQVTL 129
Query: 60 NG----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
NG E+ K L+ +YV + F VKE + LG + + A + + +
Sbjct: 130 NGHATSEIDKHTLR--SYVNYVPQTPYIFSGTVKENLLLGCRPDITEEDVIKACQIAEID 187
Query: 116 EALQKVNL-----LDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
+ + + L LD EN +I LSGGQ QR+ +AR L+ A DE G+D+I+EK
Sbjct: 188 QEIANLPLQFETKLD-ENAKI--LSGGQKQRLTIARALLSPAKVFIFDEVTSGLDTITEK 244
Query: 171 IIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
++D L LK KTI+ + H L+ + E D +++++ +G I E S L +G
Sbjct: 245 KVVDNLMKLK--DKTIIFIAHRLA-IAERADKVVVID-----HGQIVEEGSHSELMSKHG 296
sp|P75370|P29_MYCPN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN P29
>gi|2146075|pir||S73750 ATP-binding protein P29 -
Mycoplasma pneumoniae (SGC3) (ATCC 29342) >gi|1674109
(AE000041) Mycoplasma pneumoniae, ATP-binding protein
P29; similar to Swiss-Prot Accession Number P15361, from
M. hyorhinis [Mycoplasma pneumoniae]
Length = 244
Score = 93.2 bits (228), Expect = 2e-18
Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEVSK---- 65
YN +L++I + PG ++G +G GK++L+ I N S G I NG S
Sbjct: 15 YNGAPLLENINFTISPGEHICLLGKSGVGKTSLLNCITNTKTISKGTIYFNGIASNNKDY 74
Query: 66 KQLKK-IAYVEQKSD-IDHTFPIKVKECVSLGTYTGLKLFQKLGAKE----WSRVSEALQ 119
KQLKK ++++Q + ID F V + + LK +Q+L E ++ + L+
Sbjct: 75 KQLKKQFSFLDQVPNLIDTDF---VYDAIWREAKNNLKWWQRLFLVEPQSLREQIIQILE 131
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD-ILQD 178
+VNL +Y I +LSGGQ QRV +A+ + + +DEP G+D I+ IM+ I+Q
Sbjct: 132 EVNLKEYVTYIIKDLSGGQKQRVEVAKLFFANSQVLLVDEPTTGLDLINAHKIMELIIQF 191
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+ + T++ V HD+ +Y D II L + + +++ L + Y D
Sbjct: 192 ARQKAMTLIFVTHDVEFALKYSDRIIALKNKALVLDQATNKLTKQKLMQIYHD 244
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica]
Length = 272
Score = 92.8 bits (227), Expect = 2e-18
Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 10/232 (4%)
Query: 7 LNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEV-- 63
L + Y+ + +++ + + G T I+GPN GKSTL++A+ ++ P +G+++++G+
Sbjct: 19 LTLGYDGKIISENLSVAIPDGEFTVIVGPNACGKSTLLRALSRLLKPQAGQVILDGKNIA 78
Query: 64 ---SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK 120
++ + + + Q S I V + V+ G Y KL Q+ + VS+A+Q
Sbjct: 79 SLDTRHVARHLGLLPQSSQAPDG--ISVLDLVARGRYPHQKLLQQWTQADKQAVSDAMQA 136
Query: 121 VNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK 180
+ + +R + LSGGQ QRV +A L Q+ + LDEP +D + ++++ +L
Sbjct: 137 TGVSELADRSVDALSGGQRQRVWIAMVLAQQTPLLLLDEPTTYLDIAHQIDLLELFSNLN 196
Query: 181 HQ-GKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
Q T++ V HDL+ Y II + + +++ G E + ++ +G
Sbjct: 197 QQHNHTLVAVLHDLNHACRYATHIIAMRDGKIVIQGKPREVITADLVEHVFG 248
gb|AAD18384| (AE001609) ABC Transport ATPase (Nitrate/Fe) [Chlamydia pneumoniae]
Length = 235
Score = 92.8 bits (227), Expect = 2e-18
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
M+ L + +LKD + PG IT I+G +G GK+TL + + +P GE+L
Sbjct: 1 MLQAHRLCYSCDNQVILKDASFQASPGTITIILGSSGVGKTTLFRLLAGFLPLQEGELLW 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVK-ECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
NG S K +AY++QK + P + + ++L T G+ + E R+ E +
Sbjct: 61 NG--SPLNRKDVAYMQQKEAL---LPWRTALKNMTLSTELGINTSHNALSNE--RLEEII 113
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGID-SISEKIIMDILQ 177
+L +R ELSGGQ QR+ LA + + LDEPF +D + E++ DI+
Sbjct: 114 HNFDLGQLLDRYPDELSGGQRQRIALAAQCLSLKPILLLDEPFSSLDVLLKEQLYQDIVA 173
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKN 224
K + KT+L+V HD V D + ++ + + P++ + N
Sbjct: 174 LAKKENKTVLLVTHDFHDVSCLGDVLYVIKNKTLTPVPLDPSMRPLN 220
gi|2317737 (AF013987) putative ABC transporter ATP-binding protein [Vibrio
cholerae]
Length = 241
Score = 92.8 bits (227), Expect = 2e-18
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 13/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILI 59
++ ++L Y + KV+ D+ L+V G+I G++GPNGAGK+T I+ +V G I I
Sbjct: 3 ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
Query: 60 NGE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+ + + I Y+ Q++ I ++ L T L ++ +
Sbjct: 63 DDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQ-----DK 117
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
+ + L++ ++ LSGG+ +RV +AR L +I LDEPF G+D IS I
Sbjct: 118 LEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIK 177
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
I++ L+ +G +LI H++ + + + I+++ LIA G + + + +K+ Y
Sbjct: 178 KIIEHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVY 234
sp|P47532|P29_MYCGE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN P29
>gi|1361457|pir||A64232 ATP-binding protein P29 homolog
- Mycoplasma genitalium (SGC3) >gi|1045987 (U39709) ABC
transporter, ATP-binding protein [Mycoplasma genitalium]
Length = 245
Score = 92.8 bits (227), Expect = 2e-18
Identities = 67/240 (27%), Positives = 125/240 (51%), Gaps = 13/240 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
+++ + +++ Y + +L++I +V+ ++G +G GKS+L+ ++ N + SG +
Sbjct: 6 ILSFEKVSIIYKKAPLLQNISFKVMAKENVCLLGKSGVGKSSLLNSVTNTKIVKSGLVYF 65
Query: 60 NGEVS-KKQLKKI----AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE--W- 111
+G S KK+ KK+ +Y++Q ++ T V E + L QKL E W
Sbjct: 66 DGVASNKKEYKKLKKQCSYLDQIPNLIDTD--YVYEAILRSAKQKLTWLQKLICFEPKWI 123
Query: 112 -SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEK 170
++ L++VNL DY + I +LS GQ QRV +A+ + + +DEP G+D ++
Sbjct: 124 KDKILAILKEVNLNDYVSCIIKDLSAGQKQRVEIAKLFFKSPKLLLVDEPTTGLDPLTAS 183
Query: 171 IIMDILQD-LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
IMD++ D +K + T++ V HD+ +Y II L + + E +++ L K Y
Sbjct: 184 KIMDLITDFVKREKITLVFVTHDIDLALKYSTRIIALKNHALVLDRLTEKLTKEQLYKIY 243
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 92.4 bits (226), Expect = 3e-18
Identities = 65/227 (28%), Positives = 109/227 (47%), Gaps = 13/227 (5%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGE------V 63
Y +V+KD+ L V G I G++GPNGAGK+T ++ +V H G+I I+ + +
Sbjct: 13 YKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQGKIRIDDQDISVLPM 72
Query: 64 SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNL 123
+ I Y+ Q++ I H + L L Q+ R E + + ++
Sbjct: 73 HDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRK-----DRAEELISEFHI 127
Query: 124 LDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQG 183
+ LSGG+ +RV +AR L +I LDEPF G+D IS I I+ LK +G
Sbjct: 128 EHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIVHLKQRG 187
Query: 184 KTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAY 229
+LI H++ + I+ + ++IA G + + ++K+ Y
Sbjct: 188 LGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQILNNPDVKRVY 234
emb|CAB73650.1| (AL139079) putative ABC transport system ATP-binding protein
[Campylobacter jejuni]
Length = 217
Score = 92.4 bits (226), Expect = 3e-18
Identities = 69/221 (31%), Positives = 113/221 (50%), Gaps = 20/221 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAI-LNIVPHSGEILI 59
+I NLN + + K L +I L V G I+GP+G+GKSTL+ + L P SGE ++
Sbjct: 6 LIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDTPSSGEYIL 65
Query: 60 NGEVSKK--QLKKIAYVEQKSDID----HTFP-IKVKECVSLGTYTGLKLFQKLGAKEWS 112
+ E ++ + +KI +K + H P + E V L Y + ++
Sbjct: 66 DNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEE------- 118
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
L+KV L +LSGG+ QRV +AR L+ + + DEP +D +E+I+
Sbjct: 119 DAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEANEQIV 178
Query: 173 MDILQDLKHQGKTILIVHH--DLSKVKEYFDDIIILNRELI 211
+ LQ LK++GKTI+++ H DL+K + D +IL ++
Sbjct: 179 LQTLQKLKNEGKTIVLITHNPDLAK---FADRTLILQHGVL 216
emb|CAB75243.1| (AL139075) ABC-type transmembrane transport protein [Campylobacter
jejuni]
Length = 641
Score = 92.4 bits (226), Expect = 3e-18
Identities = 66/203 (32%), Positives = 104/203 (50%), Gaps = 18/203 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
MI KN+ EN +LK++ L + G IIG +G+GK++L+ I + P SG +
Sbjct: 1 MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDTPSSGTYVF 60
Query: 60 ---------NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSL-GTYTGLKLFQKLGAK 109
N E ++ + +KI ++ Q+ ++ + KE VSL Y G L ++
Sbjct: 61 DEYEVTKLNNDEKARLRREKIGFIFQRYNLLSL--LSAKENVSLPAVYAGKNLQERS--- 115
Query: 110 EWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE 169
+ L + L + + ELSGGQ QRV +AR L+ + I DEP +DS S
Sbjct: 116 --QNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELILADEPTGALDSKSG 173
Query: 170 KIIMDILQDLKHQGKTILIVHHD 192
++++ILQ L QG TI++V HD
Sbjct: 174 IMVLEILQKLNEQGHTIVLVTHD 196
gi|3800827 (AF076684) oligopeptide transporter putative ATPase domain
[Staphylococcus aureus]
Length = 258
Score = 92.4 bits (226), Expect = 3e-18
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 1 MINTKNLNVFY-NENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS----- 54
+I+ +NL + +E ++K I L++ +I +IG +GAGKS + KA+L +P
Sbjct: 4 LIDIQNLTIKNTSEKSLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSCTY 63
Query: 55 GEILINGE----VSKKQLKKIAYVEQ---KSDIDHTFPIKVKECVSLGTYTGLKLFQKLG 107
+GE +S+ I Y+ Q +S DHT K + Y G K
Sbjct: 64 DSYQFDGENVSRLSQYYGHTIGYISQNYAESFNDHTKLGKQLTAIYRKHYKGSK------ 117
Query: 108 AKEWSRVSEALQKVNLL--DYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGID 165
+ S+V +AL VNL D N+ +LSGGQ +RV +A L+ E I DEP +D
Sbjct: 118 EEALSKVDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLMLEPKLIIADEPVASLD 177
Query: 166 SISEKIIMDILQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPIN 217
+++ +MD+LQ + G+T+ I+ H+LS V +Y I +L ++I G IN
Sbjct: 178 ALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNIN 231
gi|2984365 (AE000776) ABC transporter [Aquifex aeolicus]
Length = 251
Score = 92.4 bits (226), Expect = 3e-18
Identities = 63/234 (26%), Positives = 123/234 (51%), Gaps = 14/234 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILIN 60
++ KNLN++Y E +VL D+ EV G I I+G +G+GKS+++ IL ++P + +
Sbjct: 3 LLEVKNLNLWYREKQVLFDVSFEVKIGEILCIVGESGSGKSSILFTILRLLPPYARVSGS 62
Query: 61 GEVSKKQLKKIAYVEQKS----DIDHTFP---IKVKECVSLGTY---TGLKLFQKLGAKE 110
+ ++L K++ E KS ++ F + + ++G+ T L F+ +
Sbjct: 63 VKFLGRELLKLSEREMKSIRGKEVGMVFQEPSLYLDPLFTVGSQIEETYLSHFKAGRREA 122
Query: 111 WSRVSEALQKVNLLDYENRQI---GELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSI 167
+ +A++K + E + +LSGG QRV +A +V E + DEP +D
Sbjct: 123 YEACIKAMKKAGIPKPEEKYRMYPHQLSGGLKQRVCIANAIVCEPKLVLADEPTTALDVS 182
Query: 168 SEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENF 220
++ I+ + +++K +GK ++++ HD V E D +I+L + +++ G + E F
Sbjct: 183 VQRRILALFRNMKEEGKAVILITHDFGVVAEVGDRVIVLKDGKVVEEGDVFEIF 236
gi|2293251 (AF008220) putative amino acid transporter [Bacillus subtilis]
>gi|2635399|emb|CAB14894| (Z99118) histidine transport
protein (ATP-binding protein) [Bacillus subtilis]
>gi|2635418|emb|CAB14912| (Z99119) histidine transport
protein (ATP-binding protein) [Bacillus subtilis]
Length = 259
Score = 92.4 bits (226), Expect = 3e-18
Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 12/220 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV--PHSGEIL 58
MI KN++ + + VLK I L V G + IIGP+G+GK+T ++ LN++ P G I
Sbjct: 1 MIEIKNIHKQFGIHHVLKGINLTVRKGEVVTIIGPSGSGKTTFLRC-LNLLERPDEGIIS 59
Query: 59 INGEV------SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
I+ +V SKK++ + +Q + + + + + V GL + +K+ ++
Sbjct: 60 IHDKVINCRFPSKKEVHWLR--KQTAMVFQQYHLFAHKTVIENVMEGLTIARKMRKQDAY 117
Query: 113 RVSE-ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
V+E L+KV L D N +LSGGQ QRV +AR L D + DEP +D
Sbjct: 118 AVAENELRKVGLQDKLNAYPSQLSGGQKQRVGIARALAIHPDVLLFDEPTAALDPELVGE 177
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELI 211
+++++ ++ G T+++V H++ + D ++ ++ +I
Sbjct: 178 VLEVMLEIVKTGATMIVVTHEMEFARRVSDQVVFMDEGVI 217
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Streptococcus pneumoniae]
Length = 242
Score = 92.1 bits (225), Expect = 4e-18
Identities = 65/220 (29%), Positives = 115/220 (51%), Gaps = 25/220 (11%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
MI KN+ + Y E VL+D+ L++ G ++GP+G+GK+T++K I ++ P G I +
Sbjct: 1 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLG----AKEWS--- 112
+G K++K Y E++ + + ++ ++ + L + + + K WS
Sbjct: 61 DG----KRIKD--YDERELRLSTGYVLQ-----AIALFPNLTVAENIALIPEMKGWSKEE 109
Query: 113 ---RVSEALQKVNL--LDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSI 167
+ E L KV L +Y +R ELSGG+ QRV + R ++ + +DEPF +D+I
Sbjct: 110 ITKKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAI 169
Query: 168 SEKIIMDILQDL-KHQGKTILIVHHDLSKVKEYFDDIIIL 206
S K + + ++L K G T + V HD + + D I +L
Sbjct: 170 SRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVL 209
dbj|BAA80299.1| (AP000061) 250aa long hypothetical high-affinity branched-chain
amino acid transport ATP-binding protein [Aeropyrum
pernix]
Length = 250
Score = 92.1 bits (225), Expect = 4e-18
Identities = 63/247 (25%), Positives = 122/247 (48%), Gaps = 18/247 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
M+ T+N+ + + L ++ +EV G I GIIGPNGAGK++L+ I + P G +
Sbjct: 1 MLWTENITLRFGGVTALDNVSVEVRRGEILGIIGPNGAGKTSLLNVITGVYKPQRGRVYF 60
Query: 60 NG------EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQK----LGAK 109
G + ++ ++ Q S++ H+ + V L +T + +K AK
Sbjct: 61 KGRDITGLKPHQRITLGLSRTFQHSELFHSMTVLENIMVRLHPWTRGSILEKALWAFRAK 120
Query: 110 EW-----SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGI 164
W R + ++L ++ + IG L G ++V LA L Q + + +DEP G+
Sbjct: 121 RWEVEARERAEHVIDLLDLHEHRHSPIGALPPGIQKKVDLAGALAQNPEVVLMDEPMAGL 180
Query: 165 D-SISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN-RELIAYGPINENFSQ 222
E I+ I++ + T++++ HD+ V + D +++++ ++I GP +E +
Sbjct: 181 SKEEKEDIVRAIIETSETMHTTMVLIEHDMEVVTDVCDRVVVMDYGKVIFEGPPHEAVAD 240
Query: 223 KNLKKAY 229
+ ++KAY
Sbjct: 241 ERVRKAY 247
emb|CAB37661| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 92.1 bits (225), Expect = 4e-18
Identities = 60/216 (27%), Positives = 115/216 (52%), Gaps = 10/216 (4%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEI-L 58
++ T+NL+ + + + + +I L++ G I G +GPNGAGK+T I+ +L ++ P SG I +
Sbjct: 12 IVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIKI 71
Query: 59 INGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
++ K +++ +A V + +P L Y L+ +K+ +R+ E L
Sbjct: 72 FQKDIVKDRIQILANVGSLVENPSYYP-------HLTAYENLEALRKILGVPKTRIDEVL 124
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
Q V L + N+++ S G QR+ +A L+ + + LDEP G+D I ++++
Sbjct: 125 QTVRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKR 184
Query: 179 L-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAY 213
L K G TI+I H LS++ + + I+++ + +
Sbjct: 185 LPKEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIF 220
emb|CAA11111| (AJ223088) hypothetical protein [Pseudomonas stutzeri]
Length = 241
Score = 92.1 bits (225), Expect = 4e-18
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ ++L Y +V++D+ L + G+I G++GPNGAGK+T I +V G +LI
Sbjct: 3 VLKAQHLAKSYKSRQVVRDVSLSIESGQIVGLLGPNGAGKTTCFYMIAGLVNADQGRVLI 62
Query: 60 NGE------VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+ + + I Y+ Q++ I + L T L + A E
Sbjct: 63 DQNDVTHLPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRSGRQQALEG-- 120
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
LQ+ ++ N LSGG+ +RV +AR L +I LDEPF G+D IS I
Sbjct: 121 ---LLQEFHINHIRNSLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIK 177
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILN-RELIAYGPINENFSQKNLKKAY 229
I+ LK +G +LI H++ + + + I+N +LIA G S + +K+ Y
Sbjct: 178 QIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDAQTILSNQLVKEVY 234
pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alcaligenes eutrophus
>gi|38784|emb|CAA47286| (X66793) ORF280 [Ralstonia
eutropha]
Length = 280
Score = 91.3 bits (223), Expect = 7e-18
Identities = 64/239 (26%), Positives = 120/239 (49%), Gaps = 14/239 (5%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILINGE- 62
++L Y V+KD+ L+V G + G++GPNGAGK+T I+ +V G+I+++G+
Sbjct: 42 RHLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVALDEGDIVLDGDH 101
Query: 63 -----VSKKQLKKIAYVEQKSDIDHTFPIK--VKECVSLGTYTGLKLFQKLGAKEWSRVS 115
+ ++ ++Y+ Q++ + ++ ++ + L G L + A+ R+
Sbjct: 102 ISGLPIHERAPMGLSYLPQEASVFRKLNVEENIRAVLELQVSNGKPLPK---AEIERRLD 158
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
L + + N LSGG+ +RV +AR L +I LDEPF G+D I+ I I
Sbjct: 159 SLLDDLQIAHLRNNPALSLSGGERRRVEIARALASSPRFILLDEPFAGVDPIAVGEIQRI 218
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY-GDN 232
+ LK + +LI H++ + D I++ ++A G E + +++ Y G+N
Sbjct: 219 VSFLKARNIGVLITDHNVRETLGICDHAYIISEGTVLAAGQPEEIIANDAVRRVYLGEN 277
emb|CAA14960| (AJ235272) ABC TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 90.5 bits (221), Expect = 1e-17
Identities = 64/238 (26%), Positives = 112/238 (46%), Gaps = 18/238 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
+ KN++ Y + +L DI L + G I G+ GPNGAGK+T I+ ++ P SG++L+N
Sbjct: 18 LQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQLLLN 77
Query: 61 G------EVSKKQLKKIAYVEQKSDIDHTFPI--KVKECVSLGTYTGLKLFQKLGAKEWS 112
+ + I Y+ Q+ I + +K V + + QK
Sbjct: 78 DINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQK------- 130
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
L+K +++ ++ LSGG+ +R+ +AR V E +I LDEP GID ++ I
Sbjct: 131 -THNLLEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDI 189
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFD-DIIILNRELIAYGPINENFSQKNLKKAY 229
++ L+ ILI H++ + D +I +++ G E + K +K+ Y
Sbjct: 190 KKLITYLREFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEIANSKKVKEVY 247
pir||F36889 leuD 3'-region hypothetical protein - Lactococcus lactis subsp.
lactis (strain IL1403)
Length = 259
Score = 90.1 bits (220), Expect = 2e-17
Identities = 70/245 (28%), Positives = 123/245 (49%), Gaps = 15/245 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEILI 59
+IN KN+N+ N+ ++LKDI +V PG I+G NG+GKS+L+K IL SGEI +
Sbjct: 3 IINLKNINLTRNKKEILKDITWKVNPGENWVILGLNGSGKSSLLKLILAEEWKTSGEITV 62
Query: 60 ------NGEVSKKQLKKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEW 111
NGE+ K + K+I+ V S I F IK + V G + L++ +E
Sbjct: 63 LNTQFGNGEIPKLR-KRISVV--GSFIAERFQPNIKAENLVYTGKFNSSMLYKPYTDQEL 119
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
+ L+++ R LS G+ Q +L+AR L+ + + + LDE G+D +++
Sbjct: 120 DEARQLLRQMGAKSLIGRNYASLSQGEKQVLLIARSLILKPELLILDEATNGLDLFAKEK 179
Query: 172 IMDILQDLKH--QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINEN-FSQKNLKKA 228
++ LQ + T++ + H ++ + F +++L + EN ++K L
Sbjct: 180 LLKQLQQINQLKTAPTLIYISHHPDEITDIFTHLLLLREGKVIQSGKKENLLNEKILTDF 239
Query: 229 YGDNI 233
Y + +
Sbjct: 240 YQEKV 244
bbs|63859 (S63858) orf 5' of rpoN [Rhizobium, NGR234, Peptide, 270 aa]
[Rhizobium] >gi|228369|prf||1803249A rpoN upstream ORF 1
[Rhizobium sp.]
Length = 270
Score = 90.1 bits (220), Expect = 2e-17
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 15/237 (6%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILINGE- 62
+ L Y +V+ + L V G G++GPNGAGK+T I +VP G I ING
Sbjct: 37 RGLTKSYRSRRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITGLVPVDEGSIEINGND 96
Query: 63 -----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
+ ++ + Y+ Q++ I + V+E + L++ K + S++++
Sbjct: 97 VTTMPMYRRARLGVGYLPQEASILRG--LTVEENIR----AVLEIHDKNVDRRESKLNDL 150
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L + ++ LSGG+ +R+ +AR L + ++ LDEPF G+D IS I +++
Sbjct: 151 LGEFSITHLRKSPAIALSGGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQALVR 210
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY-GDN 232
L +G +LI H++ + D I++ E++ +G N+ + ++++ Y GDN
Sbjct: 211 HLTSRGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRANDIVTNPDVRRLYLGDN 267
sp|Q02151|YLUD_LACLA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN LEUD 3'REGION
>gi|486728|pir||S35136 hypothetical protein (leuD 3'
region) - Lactococcus lactis subsp. lactis >gi|2565155
(U92974) unknown [Lactococcus lactis]
Length = 259
Score = 89.7 bits (219), Expect = 2e-17
Identities = 70/245 (28%), Positives = 123/245 (49%), Gaps = 15/245 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL-NIVPHSGEILI 59
+IN KN+N+ N+ ++LKDI +V PG I+G NG+GKS+L+K IL SGEI +
Sbjct: 3 IINLKNVNLTRNKKEILKDITWKVNPGENWVILGLNGSGKSSLLKLILAEEWKTSGEITV 62
Query: 60 ------NGEVSKKQLKKIAYVEQKSDIDHTFP--IKVKECVSLGTYTGLKLFQKLGAKEW 111
NGE+ K + K+I+ V S I F IK + V G + L++ +E
Sbjct: 63 LNTQFRNGEIPKLR-KRISVV--GSFIAERFQPNIKAENLVYTGKFNSSMLYKPYTDQEL 119
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
+ L+++ R LS G+ Q +L+AR L+ + + + LDE G+D +++
Sbjct: 120 DEARQLLRQMGAKSLIGRNYASLSQGEKQVLLIARSLILKPELLILDEATNGLDLFAKEK 179
Query: 172 IMDILQDLKH--QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINEN-FSQKNLKKA 228
++ LQ + T++ + H ++ + F +++L + EN ++K L
Sbjct: 180 LLKQLQQINQLKTAPTLIYISHHPDEITDIFTHLLLLREGKVIQSGKKENLLNEKILTDF 239
Query: 229 YGDNI 233
Y + +
Sbjct: 240 YQEKV 244
pir||B64458 high-affinity branched-chain amino acid transport ATP-binding
protein homolog - Methanococcus jannaschii >gi|1591902
(U67567) high-affinity branched-chain amino acid
transport ATP-binding protein (braF) [Methanococcus
jannaschii]
Length = 257
Score = 89.3 bits (218), Expect = 3e-17
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 24/256 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
++ T+N+ ++ E K L + + V G +T IIGPNG+GKSTLI I + G +
Sbjct: 7 ILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYF 66
Query: 60 -NGEVSKKQLKKIAYVEQKSDIDHTFPIK---VKECVSLGTYT-GLKLFQKLGAKEW--- 111
N +++ K+ ++ + P+K V E + +G G L K+W
Sbjct: 67 ENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPK 126
Query: 112 -----SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS 166
+ + L+ + L +R+ GELSGGQ + V + R L+ I +DEP G+
Sbjct: 127 EEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAP 186
Query: 167 ISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNL 225
I + + +LK +G T LI+ H L V Y D + ++ N ++IA E ++ +
Sbjct: 187 GLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIA-----EGRGEEEI 241
Query: 226 KKAYGD----NIFIGD 237
K D I+IG+
Sbjct: 242 KNVLSDPKVVEIYIGE 257
gb|AAD36474.1|AE001793_4 (AE001793) antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 88.9 bits (217), Expect = 4e-17
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 27/244 (11%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I +NL + + + +K + V G I +GPNGAGK+T I + ++ P SG+ +
Sbjct: 4 IIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWV 63
Query: 60 NGEVSKKQ----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKL----GAKEW 111
G K+ +KI V Q +D L Y + + K+ G K
Sbjct: 64 AGHDVLKEPREVRRKIGIVFQDQSLDR----------ELTAYENMYIHGKIYGYGGEKLK 113
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
R+ E L+ V LL+++++ + SGG +R+ +AR L+ E + +FLDEP +G+D +
Sbjct: 114 KRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAH 173
Query: 172 IMDILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY 229
+ + + +K + TI + H + + ++ D + I++ ++IA G E LK+
Sbjct: 174 MWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTE------LKRMV 227
Query: 230 GDNI 233
G I
Sbjct: 228 GKEI 231
gb|AAD35875.1|AE001747_18 (AE001747) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 88.5 bits (216), Expect = 5e-17
Identities = 67/242 (27%), Positives = 124/242 (50%), Gaps = 15/242 (6%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I + L + + + I L V PG I G +GPNGAGK+T IK + ++ P GE+ I
Sbjct: 11 LIVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEVEI 70
Query: 60 NG-EVSKKQL---KKIAYVEQKSDI-DHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
G ++S ++ K I + + I H + + + ++++ + R+
Sbjct: 71 LGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFI-------IEIYDLKEEEIDKRI 123
Query: 115 SEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD 174
+E + + DY +++GE+S G Q+++L +++ IFLDEP VG+D+ S +I+
Sbjct: 124 AELCEAFKV-DYLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKL 182
Query: 175 ILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNI 233
+L+ +G I + H L ++ D I I+N+ LIA G + E K+A +++
Sbjct: 183 LLRKYADEGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKLAGQKEASLEDL 242
Query: 234 FI 235
F+
Sbjct: 243 FL 244
gi|3322495 (AE001204) cobalt ABC transporter, ATP-binding protein [Treponema
pallidum]
Length = 255
Score = 88.2 bits (215), Expect = 6e-17
Identities = 58/221 (26%), Positives = 104/221 (46%), Gaps = 10/221 (4%)
Query: 10 FYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGEVSKKQLK 69
F + +VL + V PG + G NG+GK+ L+ + + P S +G V +
Sbjct: 28 FERDCEVLHSVSFRVFPGDCVVLAGANGSGKTVLMNILAGLEPPS-----SGRVYMARGT 82
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENR 129
+ Q +D ++C G A+ +R + AL V+LLD +
Sbjct: 83 TVGLAFQNADTQILGETVFEDCAFGPLQWGYSR-----AEIDARTNSALAAVSLLDRRDH 137
Query: 130 QIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
LSGG+ +R+ +A L +A + LDEPF +D S + ++ ++ LKH GKT++I+
Sbjct: 138 YARALSGGEKRRLTVAGVLALDAKVVILDEPFANLDYPSVRQVVQLIISLKHAGKTLVII 197
Query: 190 HHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
H++ K+ + IL++ +I+Y ++ + YG
Sbjct: 198 THEVEKILAAATRLCILSKGVISYDGTPQDALDSKIFSCYG 238
sp|P25885|YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
>gi|95203|pir||B32835 hypothetical ntrA protein 2 (ntrA
5' region) - Rhizobium meliloti >gi|511887 (M24926)
ATP-binding protein [Rhizobium meliloti]
Length = 270
Score = 88.2 bits (215), Expect = 6e-17
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILINGE- 62
+ L Y +V+ + L V G G++GPNGAGK+T I +VP G I ING
Sbjct: 37 RGLTKSYRSRRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITGLVPVDEGSIEINGND 96
Query: 63 -----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
+ ++ + Y+ Q++ I ++ L + + + +E S++++
Sbjct: 97 VTTMPMYRRARLGVGYLPQEASIFRGLTVEDNIRAVLEVHD-----ENVDRRE-SKLNDL 150
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L + ++ LSGG+ +R+ +AR L + ++ LDEPF G+D IS I +++
Sbjct: 151 LGEFSITHLRKSPAIALSGGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQALVR 210
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY-GDN 232
L +G +LI H++ + D I++ E++ +G N+ + ++++ Y GDN
Sbjct: 211 HLTSRGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRANDIVTNPDVRRLYLGDN 267
gi|1046230 (U23471) ABC-type permease homolog [Rhizobium leguminosarum bv.
phaseoli]
Length = 258
Score = 87.8 bits (214), Expect = 8e-17
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 5 KNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILINGE- 62
+ L Y +V+ + L V G G++GPNGAGK+T I +VP G I I+G
Sbjct: 25 RGLTKTYGTRRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITGLVPVDEGTIEIDGND 84
Query: 63 -----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
+ ++ + Y+ Q++ I + V+E + L++ K A+ +++E
Sbjct: 85 VTTMPMYRRSRLGVGYLPQEASIFRG--LTVEENIR----AVLEVHVKDKAEREQKLNEL 138
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L++ ++ LS G+ +R+ +AR L + ++ LDEPF G+D IS I +++
Sbjct: 139 LEEFHIQKLRKSAAVALSAGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQNLVH 198
Query: 178 DLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAY-GDN 232
L +G +LI H++ + D I++ E++ +G N+ + +++ Y GDN
Sbjct: 199 HLTARGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRANDIVNNPEVRRLYLGDN 255
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 87.4 bits (213), Expect = 1e-16
Identities = 62/223 (27%), Positives = 110/223 (48%), Gaps = 10/223 (4%)
Query: 10 FYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING-EVSKKQ 67
F L + V G + G++G NGAGK+T I + ++ P SG + G +V ++
Sbjct: 15 FGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRASVAGHDVVRRP 74
Query: 68 LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYE 127
+ A + P+ +L ++ L+ + AK +R E L++ NL+D
Sbjct: 75 AEVRASIGMAGQFTGLDPMLTGR-ENLVLFSRLRGLNRRRAK--ARADELLEQFNLVDAA 131
Query: 128 NRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTIL 187
+R++ SGG F+RV LA LV +FLDEP G+D S + + ++ L+ QG T+L
Sbjct: 132 DRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRVQGITVL 191
Query: 188 IVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ L + D I++++ +G + + + + LK+A G
Sbjct: 192 LTTQYLEEADVLSDSIVVID-----HGRVIASGTSEELKRAVG 229
gb|AAD35847.1|AE001746_8 (AE001746) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 87.4 bits (213), Expect = 1e-16
Identities = 68/232 (29%), Positives = 112/232 (47%), Gaps = 27/232 (11%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
++ K+L FY E + I EV G I I+GPNGAGK+T +K I + SGEI +
Sbjct: 3 ILRVKDLKKFYGEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKDSGEIEL 62
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
NG + +K Y ++VKE + L F+K+G + L
Sbjct: 63 NGTFTYLPEEKKLYPY----------LRVKEIIDL--------FKKIGKNFNEKNCLELL 104
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+ +D N ++ LS G + L+ L + D LDEP G+D I I+D ++ L
Sbjct: 105 ERFRIDL-NEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDRIRSL 163
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYG 230
+GK++L H L++V++ D + I+ ++I G +++ +K +YG
Sbjct: 164 TFEGKSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDD------IKSSYG 209
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230 (M73758) daunorubicin
resistance protein [Streptomyces peucetius]
Length = 330
Score = 87.4 bits (213), Expect = 1e-16
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I T L YN + + + L V G + GI+GPNGAGKST I+ + ++ P G +
Sbjct: 9 IETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARVF 68
Query: 61 GEVSKKQ----LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G + ++I+ Q + +D + V +G G A+ R +E
Sbjct: 69 GHDVTSEPDTVRRRISVTGQYASVDEGLT-GTENLVMMGRLQGYSW-----ARARERAAE 122
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
+ L D +R + SGG +R+ +A +V D +FLDEP G+D S + DI+
Sbjct: 123 LIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIV 182
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNI 233
+ L G T+L+ L + + D I +++ +IA G E LK + G N+
Sbjct: 183 RALVDAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGE------LKSSLGSNV 234
gi|2688562 (AE001165) spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 87.0 bits (212), Expect = 1e-16
Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 1 MINTKNLNVFY--NENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEI 57
++ KNL+ +Y N NK L +I L++ ++GP+G GK+TLIK + + +GEI
Sbjct: 5 ILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEI 64
Query: 58 -LINGEVSKKQLKK--IAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWSR 113
+ E+SK K I V Q + FP + V + +S G +K K KE +
Sbjct: 65 YFFSKEISKTSPNKREINTVFQNYAL---FPHMNVFDNISFGLR--MKKTPKDIIKE--K 117
Query: 114 VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
V +L + + Y R I ELSGGQ QRV +AR +V E + LDEP +D + +
Sbjct: 118 VKTSLSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQ 177
Query: 174 DILQDLKHQ-GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
L+ ++ Q G T + V HD + D I+++N +I E + K D
Sbjct: 178 KELKKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIYNEPKTKFVAD- 236
Query: 233 IFIGD 237
FIG+
Sbjct: 237 -FIGE 240
gi|1513298 (U66526) AbcA [Dictyostelium discoideum]
Length = 1336
Score = 87.0 bits (212), Expect = 1e-16
Identities = 63/220 (28%), Positives = 111/220 (49%), Gaps = 17/220 (7%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAYVE 75
+K + L V G I G +G NG GKST I + ++ P +G+ L+ G + IA V
Sbjct: 401 VKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALVYGH---SVISNIAAVR 457
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKL----GAKEWSRVSEALQKVNLLDYENRQI 131
+ + + I E + L+LF +L + S++ + L +V L N I
Sbjct: 458 RITSVVPQHDILWAEMTAR---EHLQLFSELKGIPAQERESQIQKVLDQVRLSKISNNLI 514
Query: 132 GELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHH 191
SGG +R+ +A + + IF+DEP G+D S++ ++D+++ +K+ K I++ H
Sbjct: 515 STYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSIKND-KVIILTSH 573
Query: 192 DLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
D+ +V+ D I+I+N ++A N + LK YG+
Sbjct: 574 DMHEVEILADKIVIMNEGVMAC-----NGNSLQLKSKYGE 608
emb|CAA69462| (Y08256) daunorubicin resistance ATP-binding protein DrrA
[Sulfolobus solfataricus]
Length = 339
Score = 86.6 bits (211), Expect = 2e-16
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I NL + + + I EV G I G +GPNGAGKST IK + ++ P G ++
Sbjct: 12 IKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 61 GEVSKKQLKKIAYVEQKSDI---DHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
G +K+ A V Q + ++T + ++ GL K A+E R E
Sbjct: 72 GY---DVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEE--RAKEL 126
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQ 177
L+ V L R++ SGG +R+ +A L+ +FLDEP +G+D+ + I +
Sbjct: 127 LEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIM 186
Query: 178 DLKHQGK-TILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNI 233
LK + K TI + H L + Y D I I+++ +++A G S K LK+ G ++
Sbjct: 187 KLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIG------SPKELKEKVGGDV 238
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - human (fragment)
>gi|495259|emb|CAA53531| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 86.2 bits (210), Expect = 2e-16
Identities = 64/247 (25%), Positives = 117/247 (46%), Gaps = 24/247 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLE------VIPGRITGIIGPNGAGKSTLIKAILNIVPHS 54
M+ +NL Y K+ + + ++ +PG G++G NGAGK++ K + +
Sbjct: 1087 MVKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTT 1146
Query: 55 G-EILINGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSR 113
G E +NG LK + V+Q F + V E L L+L+ +L W
Sbjct: 1147 GGEAFVNGH---SVLKDLLQVQQSLGYCPQFDVPVDE---LTAREHLQLYTRLRCIPWKD 1200
Query: 114 VSE----ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE 169
++ AL+K+ L Y ++ G SGG +++ A L+ +IFLDEP G+D +
Sbjct: 1201 EAQVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKAR 1260
Query: 170 KIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNLKKA 228
+ + +++ DL G+++++ H + + + + I++N L G I ++LK
Sbjct: 1261 RFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLHCLGSI------QHLKNR 1314
Query: 229 YGDNIFI 235
+GD I
Sbjct: 1315 FGDGYMI 1321
Score = 60.9 bits (145), Expect = 1e-08
Identities = 61/230 (26%), Positives = 106/230 (45%), Gaps = 12/230 (5%)
Query: 5 KNLNVFYNENKV-LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGE 62
K V+ N+ K+ L + L + ++ +G NGAGK+T + + + P SG I G
Sbjct: 31 KLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGH 90
Query: 63 VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLK-LFQKLGAKEWSRVSEALQKV 121
+ ++ +I + ++ L Y+ LK + Q+ KE ++ E L+
Sbjct: 91 DIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIEDLE-- 148
Query: 122 NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
L + + + LSGG +++ +A V + I LDEP G+D + + I D++ K
Sbjct: 149 -LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYK- 206
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
G+TIL+ H + + D I I I++G + S LK AY D
Sbjct: 207 PGRTILLSTHHMDEADLLGDRIAI-----ISHGKLKCCGSPLFLKGAYXD 251
gb|AAD53035.1|AF115538_1 (AF115538) TAP2B protein [Oncorhynchus mykiss]
Length = 723
Score = 85.4 bits (208), Expect = 4e-16
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 41/245 (16%)
Query: 6 NLNVFY---NENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING 61
NL+ Y E KVL+ LE+ PG++T ++GP+G GKST + + P GEIL++G
Sbjct: 483 NLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGEILLDG 542
Query: 62 EVSKKQL-----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
+ +KIA V Q+ + F VK+ ++ G L RV E
Sbjct: 543 LPLQSYQHHYLHRKIAMVGQEPVL---FSGSVKDNIAYG----------LADCSLERVQE 589
Query: 117 ALQKVNLLDYENR-----------QIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGID 165
A ++ N + ++ + G+LSGG+ QR+ +AR L++E + LDE +D
Sbjct: 590 AARRANAHSFISQLEKGYDTDVGERGGQLSGGEKQRIAIARALIREPQVLILDEVTSALD 649
Query: 166 SISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNL 225
+ SE ++ + L Q T+L++ H L K E D II++++ G + E + + L
Sbjct: 650 TESEHMVQEALASCPSQ--TLLVIAHRL-KTIERADQIILIDQ-----GTVQEQGTHQEL 701
Query: 226 KKAYG 230
G
Sbjct: 702 MDRKG 706
dbj|BAA80040.1| (AP000060) 250aa long hypothetical iron (III) dicitrate transport
ATP-binding protein [Aeropyrum pernix]
Length = 250
Score = 85.4 bits (208), Expect = 4e-16
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 2 INTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+ + + YN + VL+ + + PG + ++GPNG+GK+TL++ + I+ P G + +
Sbjct: 7 VRLEGVEARYNTSPPVLRGVSFSLDPGSLVALLGPNGSGKTTLLRLLAGIIKPSRGRVEV 66
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G + + + Y ++D +K E L Y G+ G ++W V AL
Sbjct: 67 CGSPPGRVRRMLGYAPASPEVDPR--LKAVEVALLYRY-GVSEGVAWGRRDWEEVLAALG 123
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
++ + + R+ GELS GQ + V+LA L + LDEP +D + + + +L+ L
Sbjct: 124 EMGVGELAWRRWGELSSGQRRLVILAGVLARRPGLALLDEPHSFLDVSNMRRVTLVLRSL 183
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELI-AYGPINENFSQKNLKKAYG 230
+ + + H L+ + D +I+L L+ A GP + + +++ YG
Sbjct: 184 RGRATIVYTTHDPLAAMAA--DSVIMLREGLLHAQGPPEAVVTPETIEEVYG 233
emb|CAB05919| (Z83329) transport-associated protein [Salmo salar]
Length = 356
Score = 85.0 bits (207), Expect = 5e-16
Identities = 71/249 (28%), Positives = 120/249 (47%), Gaps = 41/249 (16%)
Query: 2 INTKNLNVFY---NENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEI 57
++ NL+ Y E KVL+ LE+ PG++T ++GP+G GKST + + P GEI
Sbjct: 112 VHFNNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGEI 171
Query: 58 LINGEVSKKQL-----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
L++G +KIA V Q+ + F +K+ ++ G L
Sbjct: 172 LLDGLPLHSYQHHYLHRKIAMVGQEPVL---FSGSIKDNIAYG----------LADCSLE 218
Query: 113 RVSEALQKVNLLDYENR-----------QIGELSGGQFQRVLLARCLVQEADYIFLDEPF 161
RV EA ++ N + ++ + G+LSGG+ QR+ +AR L++E + LDE
Sbjct: 219 RVQEAARRANAHSFISQLEKGYDTDVGERGGQLSGGEKQRIAIARALIREPQVLILDEVT 278
Query: 162 VGIDSISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFS 221
+D+ SE ++ + L Q T+L++ H L K E D II++++ G + E +
Sbjct: 279 SALDTESEHMVQEALASCPSQ--TLLVIAHRL-KTIERADQIILIDQ-----GTVQEQGT 330
Query: 222 QKNLKKAYG 230
+ L G
Sbjct: 331 HQELMDRKG 339
gi|1573662 (U32749) ATP-binding transport protein (cydD) [Haemophilus
influenzae Rd]
Length = 560
Score = 85.0 bits (207), Expect = 5e-16
Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 27/241 (11%)
Query: 2 INTKNLNVFYNENK-VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILI 59
+ K+L+ Y+E K + + L ++P +++ +G +G GKSTL+ ++ GEIL
Sbjct: 314 VEIKDLHFSYSEEKPAITGLNLSILPNQLSVFVGKSGCGKSTLVSLLMGFNKAQQGEILF 373
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
NG+ + + + ++ ++ S + H+ V GT K+ A + ++ L+
Sbjct: 374 NGQ-NALNIDRTSFYQKVSLVSHS------SYVFKGTLRENMTMAKIDATD-EQIYACLE 425
Query: 120 KVNLLDYENRQIG----------ELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE 169
+VNL + G LSGGQ QR+ LAR L+ A+ DE ID SE
Sbjct: 426 QVNLAQFVRDNGGLDMQLLSRGANLSGGQIQRLALARALLHNAELYIFDEATSNIDVESE 485
Query: 170 KIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY 229
+II+ +Q K Q KTI+++ H L+ D I +L++ G + E + K L +
Sbjct: 486 EIILQFIQQFKQQ-KTIVMISHRLANAVN-ADCINVLDQ-----GKLIEQGTHKELMEKQ 538
Query: 230 G 230
G
Sbjct: 539 G 539
gb|AAD20382| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 84.7 bits (206), Expect = 7e-16
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 10/223 (4%)
Query: 10 FYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING-EVSKKQ 67
F L + V G + G++G NGAGK+T I + ++ P SG + G +V +
Sbjct: 15 FGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGNVAGHDVVARP 74
Query: 68 LKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYE 127
+ A + P+ +L ++ L+ + AK +R E L++ NL+D
Sbjct: 75 AEVRANIGMAGQFTGLDPMLTGR-ENLVLFSRLRGLNRRRAK--ARADELLEQFNLVDAA 131
Query: 128 NRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTIL 187
+R++ SGG F+RV LA LV +FLDEP G+D S + + ++ L+ QG T+L
Sbjct: 132 DRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRVQGITVL 191
Query: 188 IVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ L + D I++++ +G + + + + LK+A G
Sbjct: 192 LTTQYLEEADVLSDSIVVID-----HGRVIASGTSEELKRAVG 229
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 nodulation protein homolog -
Escherichia coli >gi|473794|dbj|BAA05583| (D26562) 'ORF'
[Escherichia coli] >gi|1786319 (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli]
Length = 308
Score = 84.7 bits (206), Expect = 7e-16
Identities = 65/228 (28%), Positives = 114/228 (49%), Gaps = 16/228 (7%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGEVSKKQL----K 69
+ L+ I L+V G ++GPNGAGKST I I ++V SG + + G +K + +
Sbjct: 19 QALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKR 78
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENR 129
++ V Q+ + + F + V+ Y G++ + + R + L++++L N
Sbjct: 79 QLGLVPQEFNFN-PFETVQQIVVNQAGYYGVER-----KEAYIRSEKYLKQLDLWGKRNE 132
Query: 130 QIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
+ LSGG +R+++AR L+ E + LDEP G+D + + L+DL +G TI++
Sbjct: 133 RARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILT 192
Query: 190 HHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFIGD 237
H L + +++ N +I +G + EN S K L FI D
Sbjct: 193 THYLEEA-----EMLCRNIGIIQHGELVENTSMKALLAKLKSETFILD 235
gi|2648659 (AE000972) daunorubicin resistance ATP-binding protein (drrA)
[Archaeoglobus fulgidus]
Length = 398
Score = 84.3 bits (205), Expect = 9e-16
Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I +NL + + + ++ + +V G I +GPNGAGK+T + + ++ P SG+ +
Sbjct: 80 IEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAFVA 139
Query: 61 G----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE 116
G +++ ++I V Q +D V G Y GLK G + ++
Sbjct: 140 GLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVY-GLK-----GKELKEKIER 193
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
L+ V L ++ ++ + SGG +R+ +AR L+ + +FLDEP +G+D + + +
Sbjct: 194 LLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYI 253
Query: 177 QDLK-HQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNI 233
+ +K Q TI + H + + ++ D + I++ +IA G + E LK+ G ++
Sbjct: 254 EAMKEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEE------LKRLVGSDV 306
gi|2621521 (AE000829) methyl coenzyme M reductase system, component A2 homolog
[Methanobacterium thermoautotrophicum]
Length = 480
Score = 84.3 bits (205), Expect = 9e-16
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH--SGEILINGEVSKKQLKK 70
E L+D+ L V G I G +G+GKSTL +A+ ++P GE+ V +
Sbjct: 17 ERLALRDVSLRVKRGESVFITGRSGSGKSTLARAVTAVIPSMMGGEMDGTVRVMGRDTDS 76
Query: 71 IAYVEQKSDIDHTFP--------IKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVN 122
+ + +D+ + F + V VSLG T L+L K RV +AL++V
Sbjct: 77 LTPGDLAADVGYVFQNPESQFFTLNVNSEVSLGPDT-LQL-----DKREERVEDALRRVG 130
Query: 123 LLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQ 182
+ + + LS G+ QRV +A L + + +DEP +D S + IL++L+
Sbjct: 131 MEHKRHESVFNLSEGEKQRVAIASQLSMSPEILLMDEPTSNLDQGSTDDLFSILKNLR-- 188
Query: 183 GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
KT++++ H +V E FD +++++ +I +N ++ YG
Sbjct: 189 DKTLILIDHRTYRVPEVFDRVVVMDEGMIVEETDTDNLLDPEFRERYG 236
Score = 73.4 bits (177), Expect = 2e-12
Identities = 54/193 (27%), Positives = 90/193 (45%), Gaps = 22/193 (11%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAYVE 75
L + L++ G + G+ GPNG+GK+TL + I+ ++ P GEI + G
Sbjct: 286 LDGVNLDLWRGEVLGLTGPNGSGKTTLARLIVGLIEPEMGEIRVEGTAGLVM-------- 337
Query: 76 QKSDIDHT-FPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQIGEL 134
D DH F VK ++ G L V + L+ + L R L
Sbjct: 338 --QDPDHQLFMDTVKREITFG----------LDDYSDGDVEDLLETMKLHQLMERHPHSL 385
Query: 135 SGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHDLS 194
SGG+ QR L++ L ++ D I +DEP G+D + K + + LK G ++++ HDL
Sbjct: 386 SGGEKQRTLISVYLFRKPDLIIMDEPTTGMDLDNMKRLAGWIGKLKGMGVAMILISHDLE 445
Query: 195 KVKEYFDDIIILN 207
++ D I+++
Sbjct: 446 FLQMVADRTIMMD 458
gb|AAD36105.1|AE001764_8 (AE001764) ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 83.9 bits (204), Expect = 1e-15
Identities = 66/240 (27%), Positives = 118/240 (48%), Gaps = 18/240 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ ++L +Y +++ ++ + V G I G IGPNGAGK+T I+ +L ++ P SG I
Sbjct: 3 VVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLAEI 62
Query: 60 NGE----VSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVS 115
G+ K+ K + Y+ ++ + V+E + ++K+ +W V
Sbjct: 63 FGKDVLKEGKEIRKNVGYIP--GEVSFYPEVTVEEFLRYSA----SFYEKV---DWDYVK 113
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
E L V LD + R I ELS G ++V + + L+ + LDEP G+D I + +I
Sbjct: 114 E-LCGVFSLDTKKR-IKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEI 171
Query: 176 LQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLK--KAYGDNI 233
L++ K +G T+ H LS+V+ D + ++ I EN + K + G+N+
Sbjct: 172 LKNEKEKGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLKGERYKVVRVKGENL 231
emb|CAB13408| (Z99112) similar to ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 264
Score = 83.9 bits (204), Expect = 1e-15
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 20/250 (8%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
++ N+++ N +LKDI +V + G NGAGK+ L+ + + P SGE+ +
Sbjct: 2 ILQLDNVSLKRNGKWILKDIHWKVEEKENWVLYGLNGAGKTALLNMLCSYYFPTSGEMRV 61
Query: 60 NG------EVSKKQLKKIAYV-----EQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGA 108
G E+ +K +KI V ++ D F I + G Y + L++
Sbjct: 62 LGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEIALS-----GAYASIGLYETPSK 116
Query: 109 KEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
+ + L+ + ++Y +R+ LS G+ QR L+AR L+ + + + LDEP G+D I+
Sbjct: 117 ETREKAIGLLEDLGAIEYADRRYETLSQGEKQRALIARALMADPELLILDEPVTGLDFIA 176
Query: 169 EKIIMDILQDL--KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNL 225
+ ++D + + K +IL V H ++ FD ++L + E+ G I E + + L
Sbjct: 177 REKLLDTITYIANKENAPSILYVTHHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQIL 236
Query: 226 KKAYGDNIFI 235
+ I +
Sbjct: 237 SAFFDTPIHV 246
dbj|BAA81596.1| (AP000064) 333aa long hypothetical ABC transporter ATP-binding
protein [Aeropyrum pernix]
Length = 333
Score = 83.1 bits (202), Expect = 2e-15
Identities = 58/236 (24%), Positives = 114/236 (47%), Gaps = 7/236 (2%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
M+ + L Y + + + + G + ++GPNGAGK+T IK + ++ P SGE I
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
G ++ + V D T ++ ++ Y +L+ ++ R E L
Sbjct: 69 AGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNV--YIQARLYGLPSSEARERTREVLD 126
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
++L++ +R++ SGG +++ +A LV +FLDEP +G+D S + + ++DL
Sbjct: 127 YLDLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDL 186
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
K TIL+ H + + + D + I++R I + E ++ + G+ ++I
Sbjct: 187 KRSAVTILLTTHYMEEAEMLSDRVAIIDRGRI----VAEGTPEELKARVKGETVYI 238
gi|2622194 (AE000880) ABC transporter (ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 312
Score = 83.1 bits (202), Expect = 2e-15
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 17/236 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+I T+++ Y+E +K + L V G I G++GPNGAGK+TLI + I+ P G +
Sbjct: 4 IIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTV 63
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS----RVS 115
NG + +K+ + I F + + + G L++ L R+
Sbjct: 64 NGYDIVRDARKV-----RESIGIVFQSRALDDILTGR-EHLEMHAALYGVPRDVRDRRIE 117
Query: 116 EALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDI 175
E L+ + L D + + SGG +R+ + R L+ +FLDEP +G+D + + I
Sbjct: 118 EVLELIALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRY 177
Query: 176 LQDL-KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
++ L + + T+L+ H + + + D++ I+ ++G I + S NLK+ G
Sbjct: 178 IEKLNREEDVTVLLTTHYMEEADKLCDEVAIM-----SHGEIIKADSPGNLKRELG 228
emb|CAA16215| (AL021411) cobalt transport system ATP binding protein
[Streptomyces coelicolor]
Length = 284
Score = 82.7 bits (201), Expect = 3e-15
Identities = 62/223 (27%), Positives = 104/223 (45%), Gaps = 13/223 (5%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILN-IVPHSGEILINGE---VSKKQLKKI 71
VL + V GR ++G NG+GK+TL++ + + PH+G + + GE +K L ++
Sbjct: 30 VLTGLDFAVREGRALALLGRNGSGKTTLMRLLSGGLKPHTGTLTLGGEPVAYDRKGLTRL 89
Query: 72 AYVEQ---KSDIDHTFPIKVKECVSLGTYT-GLKLFQKLGAKEWSRVSEALQKVNLLDYE 127
Q + D F V + VS G GL A+ SRV EAL +++
Sbjct: 90 RTTVQLVVQDPDDQLFAASVGQDVSFGPLNLGLS-----DAEVRSRVGEALAALDISGLA 144
Query: 128 NRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTIL 187
R LS GQ +R +A + + LDEP G+D ++ ++ L L+ G T++
Sbjct: 145 ERPTHLLSYGQRKRTAIAGAVAMRPRVLILDEPTAGLDPDGQERLLATLDGLRAGGTTVV 204
Query: 188 IVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ HD+ + DD +L E + GP ++ +L + G
Sbjct: 205 MATHDVDLALRWSDDAALLTPEGVRTGPTAATLARTDLLRRAG 247
gb|AAD18862| (AE001653) ABC Transporter ATPase [Chlamydia pneumoniae]
Length = 240
Score = 82.3 bits (200), Expect = 3e-15
Identities = 62/242 (25%), Positives = 122/242 (49%), Gaps = 17/242 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
+++ NL YN+ V D+ ++ PG I G++GPNGAGK+T + ++ P SG+I+
Sbjct: 3 ILSVCNLVKKYNKKPVTNDVSFQINPGEIVGLLGPNGAGKTTAFYLTVGLIRPDSGKIIF 62
Query: 60 -NGEVSKKQLKK-----IAYVEQKSDIDHTFPIKVK-ECVSLGTYTGLKLFQKLGAKEWS 112
N +V+KK + I Y+ Q+ I ++ C+ L++ K ++
Sbjct: 63 KNVDVTKKTMDHRARLGIGYLAQEPTIFKELTVQDNLICI-------LEIIYKARKQQSH 115
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
++ + + L +++ G LSGG+ +R+ +A L + LDEPF +D + + +
Sbjct: 116 LLNTLVDDLQLGSCLHKKAGTLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNV 175
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDD-IIILNRELIAYGPINENFSQKNLKKAY-G 230
+++ L +G ILI H+ ++ D +I++ ++ G ++ S +K+ Y G
Sbjct: 176 KYLIKILAGRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSSQMISNPMVKQHYLG 235
Query: 231 DN 232
D+
Sbjct: 236 DS 237
gi|1698421 (U40139) ComA [Streptococcus gordonii]
Length = 532
Score = 82.3 bits (200), Expect = 3e-15
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 18/222 (8%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPHSGEILINGEVSKKQLKKIA-- 72
VL +I L + G T +G +G+GK+TL K +++ P+ G+I + G V+ QL K A
Sbjct: 314 VLSEIDLHIPAGSKTSFVGVSGSGKTTLAKMMVHFYAPNQGDICLGG-VNLNQLDKQALR 372
Query: 73 -YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQI 131
Y+ + F + E + LG G L A E + + ++++ L +Y+
Sbjct: 373 QYINYLPQQPYVFNGTILENLLLGAREGTTQEDILRAVELAEIRSDIERMPL-NYQTELS 431
Query: 132 GE---LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILI 188
+ +SGGQ QR+ LAR L+ +A + LDE +D ++EK I+D L L KTI+
Sbjct: 432 ADGAGISGGQRQRIALARALLTDAPVLILDEATSSLDILTEKRIIDNLMVL---DKTIIF 488
Query: 189 VHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
+ H L+ + E + +++L++ G I E+ S K L + G
Sbjct: 489 IAHRLT-IAERSEQVVVLDQ-----GRIVESGSHKELIEREG 524
pir||S21957 P-glycoprotein pgp1 - Arabidopsis thaliana
Length = 1233
Score = 82.3 bits (200), Expect = 3e-15
Identities = 68/235 (28%), Positives = 121/235 (50%), Gaps = 20/235 (8%)
Query: 1 MINTKNLNVFYNEN---KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGE 56
++ KN++ Y K+L + L V G+ ++G +G+GKST++ I P+SG+
Sbjct: 314 LVELKNVDFSYPSRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQ 373
Query: 57 ILINGEVSKKQLKKIAYVEQK----SDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
+L++G+ K K+ ++ Q+ S F +KE + LG ++ +E +
Sbjct: 374 VLLDGQDLKTL--KLRWLRQQIGLVSQEPALFATSIKENILLGRPDA----DQVEIEEAA 427
Query: 113 RVSEALQKV-NLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSI 167
RV+ A + L D + Q+GE LSGGQ QR+ +AR +++ + LDE +DS
Sbjct: 428 RVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSE 487
Query: 168 SEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQ 222
SEK++ + L D G+T LI+ H LS +++ ++ + G +E FS+
Sbjct: 488 SEKLVQEAL-DRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSK 541
Score = 79.2 bits (192), Expect = 3e-14
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQ-----L 68
++ +D+ L G+ ++GP+G GKS++I I P SG ++I+G+ +K
Sbjct: 987 QIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKAIR 1046
Query: 69 KKIAYVEQKSDIDHTFPIKVKECVSLG--TYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
K IA V Q+ + F + E ++ G T ++ Q + AL + Y
Sbjct: 1047 KHIAIVPQEPCL---FGTTIYENIAYGHECATEAEIIQAATLASAHKFISALPE-GYKTY 1102
Query: 127 ENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTI 186
+ +LSGGQ QR+ +AR LV++A+ + LDE +D+ SE+ + + L D G+T
Sbjct: 1103 VGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEAL-DQACSGRTS 1161
Query: 187 LIVHHDLSKVKEYFDDIIILNRELIAY---GPINENFSQKNLKKAYGDNIF 234
++V H LS ++ N +IA G + E S +L K + D I+
Sbjct: 1162 IVVAHRLSTIR---------NAHVIAVIDDGKVAEQGSHSHLLKNHPDGIY 1203
pir||A42150 P-glycoprotein atpgp1 - Arabidopsis thaliana
>gi|3849833|emb|CAA43646| (X61370) P-glycoprotein
[Arabidopsis thaliana]
>gi|4883607|gb|AAD31576.1|AC006922_8 (AC006922) putative
ABC transporter [Arabidopsis thaliana]
Length = 1286
Score = 82.3 bits (200), Expect = 3e-15
Identities = 68/235 (28%), Positives = 121/235 (50%), Gaps = 20/235 (8%)
Query: 1 MINTKNLNVFYNEN---KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGE 56
++ KN++ Y K+L + L V G+ ++G +G+GKST++ I P+SG+
Sbjct: 367 LVELKNVDFSYPSRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQ 426
Query: 57 ILINGEVSKKQLKKIAYVEQK----SDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
+L++G+ K K+ ++ Q+ S F +KE + LG ++ +E +
Sbjct: 427 VLLDGQDLKTL--KLRWLRQQIGLVSQEPALFATSIKENILLGRPDA----DQVEIEEAA 480
Query: 113 RVSEALQKV-NLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSI 167
RV+ A + L D + Q+GE LSGGQ QR+ +AR +++ + LDE +DS
Sbjct: 481 RVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSE 540
Query: 168 SEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQ 222
SEK++ + L D G+T LI+ H LS +++ ++ + G +E FS+
Sbjct: 541 SEKLVQEAL-DRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSK 594
Score = 79.2 bits (192), Expect = 3e-14
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 15 KVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQ-----L 68
++ +D+ L G+ ++GP+G GKS++I I P SG ++I+G+ +K
Sbjct: 1040 QIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKAIR 1099
Query: 69 KKIAYVEQKSDIDHTFPIKVKECVSLG--TYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
K IA V Q+ + F + E ++ G T ++ Q + AL + Y
Sbjct: 1100 KHIAIVPQEPCL---FGTTIYENIAYGHECATEAEIIQAATLASAHKFISALPE-GYKTY 1155
Query: 127 ENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTI 186
+ +LSGGQ QR+ +AR LV++A+ + LDE +D+ SE+ + + L D G+T
Sbjct: 1156 VGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEAL-DQACSGRTS 1214
Query: 187 LIVHHDLSKVKEYFDDIIILNRELIAY---GPINENFSQKNLKKAYGDNIF 234
++V H LS ++ N +IA G + E S +L K + D I+
Sbjct: 1215 IVVAHRLSTIR---------NAHVIAVIDDGKVAEQGSHSHLLKNHPDGIY 1256
gb|AAD36035.1|AE001758_13 (AE001758) ribose ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 523
Score = 81.9 bits (199), Expect = 5e-15
Identities = 57/243 (23%), Positives = 119/243 (48%), Gaps = 14/243 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEILI 59
++ +N+ + + ++ L++ G + ++G NGAGKSTL+K + + P + G+I +
Sbjct: 12 LLEARNITKTFPGVIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVYPDYEGQIFL 71
Query: 60 NGEVSK------KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYT--GLKLFQKLGAKEW 111
G+ + Q IA + Q+ D+ +S G+ +QK+ +
Sbjct: 72 EGKEVRFRNPREAQENGIALIPQELDLVPNLSSAENIFLSREPVNEFGVIEYQKM----F 127
Query: 112 SRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
+ S+ K+ + ++ +LS Q Q V +A+ L +A I +DEP I +
Sbjct: 128 EQASKLFSKLGVNIDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTSAIGKRETEQ 187
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYG 230
+ +I++ LK++GK+++ + H L ++ E D ++++ + + GPI E K ++ G
Sbjct: 188 LFNIIRSLKNEGKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEFDHDKLVRLMVG 247
Query: 231 DNI 233
+I
Sbjct: 248 RSI 250
Score = 63.2 bits (151), Expect = 2e-09
Identities = 56/227 (24%), Positives = 105/227 (45%), Gaps = 14/227 (6%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH--SGEILINGEVSKKQLKKIAY 73
++ D+ V G + GI G GAG++ L++AI P G++ I G+ K + A
Sbjct: 282 LVDDVSFYVRKGEVLGIYGLVGAGRTELLEAIFGAHPGRTEGKVFIGGKEIKIHSPRDAV 341
Query: 74 V-------EQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGA----KEWSRVSEALQKVN 122
E + + V ++L + + +K G E V ++K+N
Sbjct: 342 KNGIGLVPEDRKTAGLILQMSVLHNITLPSVVMKLIVRKFGLIDSQLEKEIVRSFIEKLN 401
Query: 123 LLDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
+ QI E LSGG Q+V+LA+ L + + LDEP GID ++ I ++ ++
Sbjct: 402 IKTPSPYQIVENLSGGNQQKVVLAKWLAIKPKVLLLDEPTRGIDVNAKSEIYKLISEMAV 461
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKA 228
G +++V +L ++ D I++++ + E ++++L KA
Sbjct: 462 SGMGVVMVSSELPEILAMSDRILVMSEGRKTAEFLREEVTEEDLLKA 508
gi|2746911 (AF040659) similar to the ATP-binding transport protein family
[Caenorhabditis elegans]
Length = 811
Score = 81.5 bits (198), Expect = 6e-15
Identities = 68/228 (29%), Positives = 118/228 (50%), Gaps = 28/228 (12%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING----EVSKKQLK- 69
+++D+ V PG + ++GP+G GKS+ I + + P SGE+LI+G E K L
Sbjct: 535 IMEDLTFTVEPGEVVALVGPSGGGKSSCIAMLEHFYEPTSGEVLIDGVPVREYDHKFLHT 594
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV--NLLDYE 127
K+A V Q+ P+ V+ GL + + ++++ A + + D
Sbjct: 595 KVALVGQE-------PVLYARSVTENIGYGLDKYDDDMVQNSAKLANAHTFIMNDTTDGY 647
Query: 128 NRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD-ILQDLKHQ 182
N +GE +SGGQ QR+ +AR LV++ + LDE +D+ SE + + I ++LK
Sbjct: 648 NTNVGEKGSQMSGGQKQRIAIARALVRQPVVLLLDEATSALDAESEHTVQEAISKNLK-- 705
Query: 183 GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
GKT++++ H LS V E D I+++N+ G + + + K L + G
Sbjct: 706 GKTVILIAHRLSTV-ENADKIVVINK-----GKVEQLGNHKTLMEQEG 747
dbj|BAA11737| (D83026) homologous to many ATP-binding transport proteins;
hypothetical [Bacillus subtilis]
>gi|2636401|emb|CAB15892| (Z99123) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 295
Score = 81.5 bits (198), Expect = 6e-15
Identities = 60/235 (25%), Positives = 116/235 (48%), Gaps = 14/235 (5%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILI 59
M++ ++L Y ++ +K++ V ++GPNGAGK+T ++ + ++ P SG I +
Sbjct: 1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKL 60
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
GE K + I Y+ Q +++ + G +GL K ++ E L+
Sbjct: 61 LGE-KKLDRRLIGYLPQYPAF-YSWMTANEFLTFAGRLSGLSK-----RKCQEKIGEMLE 113
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
V L + +++IG SGG QR+ LA+ L+ + ++ LDEP +D ++D++++L
Sbjct: 114 FVGLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMREL 173
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
K + +L H L ++ D ++I+ G I+ + LK+ N+F
Sbjct: 174 K-KHMAVLFSTHVLHDAEQVCDQVVIMKN-----GEISWKGELQELKQQQQTNVF 222
dbj|BAA10337| (D64001) phosphate transport ATP-binding protein PstB
[Synechocystis sp.]
Length = 266
Score = 81.5 bits (198), Expect = 6e-15
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKA------ILNIVPHS 54
++ + +NV+Y + +KD + + R+ IGP+G GKSTL++ +++I
Sbjct: 12 VLEAQGVNVYYGSHLAVKDCNISIPERRVVAFIGPSGCGKSTLLRCFNRMNDLVSIARVE 71
Query: 55 GEILINGE------VSKKQLK-KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLG 107
G I +G V L+ I V QK++ FP + E ++ G KL G
Sbjct: 72 GRITYHGSDIYAPSVDPVGLRCSIGMVFQKAN---PFPKSIYENIAWGA----KLNNFQG 124
Query: 108 AKEWSRVSEALQKVNLLDYENRQIG----ELSGGQFQRVLLARCLVQEADYIFLDEPFVG 163
+ V +L++ L D ++ LSGGQ QR+ +AR + + + I +DEP
Sbjct: 125 DMD-ELVETSLRRAALWDEVKDKLKASGFSLSGGQQQRLCIARAIAVQPEVILMDEPCSA 183
Query: 164 IDSISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRE----------LIAY 213
+D IS I ++ +LK Q TI+IV H++ + D N E L+ Y
Sbjct: 184 LDPISTLKIEGLMHELKEQ-FTIVIVTHNMQQASRVSDYTAFFNVESVDRGAKVGSLVEY 242
Query: 214 GPINENFSQKNLKKAYGDNI 233
GP E F Q LK++ D +
Sbjct: 243 GPTEEIF-QNPLKESTRDYV 261
dbj|BAA83014.1| (AB028985) KIAA1062 protein [Homo sapiens]
Length = 1529
Score = 80.4 bits (195), Expect = 1e-14
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 1 MINTKNLNVFYNENKVLKDIQLE-----VIPGRITGIIGPNGAGKSTLIKAILNIVPHSG 55
M+ +NL Y K+ + + ++ V PG G++G NGAGK++ K + +G
Sbjct: 1143 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1202
Query: 56 -EILINGEVSKKQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKE 110
E +NG K+L + + Y Q D F L L+L+ +L
Sbjct: 1203 GEAFVNGHSVLKELLQVQQSLGYCPQ---CDALFD-------ELTAREHLQLYTRLRGIS 1252
Query: 111 WSR----VSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS 166
W V AL+K+ L Y ++ G SGG +++ A L+ +IFLDEP G+D
Sbjct: 1253 WKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDP 1312
Query: 167 ISEKIIMDILQDLKHQGKTILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNL 225
+ + + +++ DL G+++++ H + + + + I++N L G I ++L
Sbjct: 1313 KARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSI------QHL 1366
Query: 226 KKAYGDNIFI 235
K +GD I
Sbjct: 1367 KNRFGDGYMI 1376
Score = 59.3 bits (141), Expect = 3e-08
Identities = 59/229 (25%), Positives = 104/229 (44%), Gaps = 13/229 (5%)
Query: 7 LNVFYNENK--VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGEV 63
L Y ++K L + L + ++ +G NGAGK+T + + + P SG I G
Sbjct: 89 LTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHD 148
Query: 64 SKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLK-LFQKLGAKEWSRVSEALQKVN 122
+ ++ +I + ++ L Y+ LK + Q+ +E ++ E L+
Sbjct: 149 IRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLE--- 205
Query: 123 LLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQ 182
L + + + LSGG +++ +A V + I LDEP G+D + + I D++ K
Sbjct: 206 LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYK-P 264
Query: 183 GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
G+TIL+ H + + D I I I++G + S LK YGD
Sbjct: 265 GRTILLSTHHMDEADLLGDRIAI-----ISHGKLKCCGSPLFLKGTYGD 308
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 80.0 bits (194), Expect = 2e-14
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 26/232 (11%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKI 71
E ++++ V G++ G++GPNGAGK+T ++ ++ ++ P GEI + G + +
Sbjct: 579 ERYAVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDGEIRVFGHAIRPGAPVL 638
Query: 72 ----AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAK--EWSRVSEALQKVNLLD 125
A+VE + H L L+L+ + + E + + EAL+ L D
Sbjct: 639 SRVGAFVEGAGFLPH-----------LSGRENLELYWRATGRPPENAHLDEALEIAGLGD 687
Query: 126 YENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKT 185
R + S G QR+ +A+ ++ D + LDEP G+D + + +++ G+T
Sbjct: 688 ALARAVRTYSQGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRYAAAGRT 747
Query: 186 ILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNIFIG 236
+++ H L++V++ +++++R L+ GP+ E GD + +G
Sbjct: 748 VIVSSHLLAEVEQSCTHLVVMDRGRLVQAGPVAEIIGS-------GDTLLVG 792
gb|AAF12577.1|AE001826_46 (AE001826) hemin ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 261
Score = 80.0 bits (194), Expect = 2e-14
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILING 61
I +L+ ++L ++ + G + ++G NGAGKSTL+K + + SG L
Sbjct: 8 IRVTDLSYSVAGRELLSKLKFHLQSGEMLAVLGRNGAGKSTLLKHLTGELGKSGVELFGQ 67
Query: 62 EVSK----KQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEA 117
+ + K+ A + Q++ + +F +V + V LG + Q+ ++ + +
Sbjct: 68 PLRDIKPAEAAKRRAVLPQQTPL--SFAYEVLDVVLLGR---IPHGQRETVQDRAIAAAC 122
Query: 118 LQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYI-----FLDEPFVGIDSISEKII 172
L++V L YE R + LSGG+ QRV AR L Q I LDEP +D +
Sbjct: 123 LERVGLSGYETRDVLTLSGGEQQRVHFARTLAQLHGVIGERVLLLDEPTASLDLAHQHAT 182
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGD 231
+ + ++L +G +L V HDL+ +Y D +++L +IA + ++++ AYG
Sbjct: 183 LRLARELCREGVGVLAVLHDLNLAAQYADRVLMLAEGHVIACDHPAVALTPESIRTAYGH 242
Query: 232 NIFI 235
+ +
Sbjct: 243 EVLV 246
gi|4204793 (U52079) P-glycoprotein [Solanum tuberosum]
Length = 1313
Score = 79.6 bits (193), Expect = 2e-14
Identities = 65/211 (30%), Positives = 112/211 (52%), Gaps = 22/211 (10%)
Query: 2 INTKNLNVFYN---ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEI 57
+ KN+ Y E K+L + L V G+ ++G +G+GKST++ I P SG++
Sbjct: 394 LELKNVEFSYPSRPEIKILNNFNLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQL 453
Query: 58 LING-EVSKKQLK----KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWS 112
+++G ++ +LK +I V Q+ + F +KE + LG ++ +E +
Sbjct: 454 MLDGNDIKTLKLKWLRQQIGLVSQEPAL---FATSIKENILLGRPDATQI----EIEEAA 506
Query: 113 RVSEALQKV-NLLDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSI 167
RV+ A V L D + Q+GE LSGGQ QR+ +AR +++ + LDE +DS
Sbjct: 507 RVANAHSFVIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSE 566
Query: 168 SEKIIMDILQDLKHQGKTILIVHHDLSKVKE 198
SEK++ + L D G+T L++ H LS +++
Sbjct: 567 SEKLVQEAL-DRFMIGRTTLVIAHRLSTIRK 596
Score = 78.8 bits (191), Expect = 4e-14
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 31/233 (13%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING-EVSKKQLKK--- 70
+ +D+ L G+ ++GP+G GKS++I I P SG ++I+G ++ K LK
Sbjct: 1066 IFRDLNLRARAGKTLALVGPSGCGKSSVISLIERFYEPSSGRVIIDGKDIRKYNLKSLRR 1125
Query: 71 -IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLL-DYEN 128
IA V Q+ + F + E ++ G + + E + ++ A + ++ L D
Sbjct: 1126 HIAVVPQEPCL---FATTIYENIAYGHESATEA----EITEAATLANAHKFISALPDGYK 1178
Query: 129 RQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK 184
+GE LSGGQ QR+ +AR +++A+ + LDE +D+ SE+ + + L D GK
Sbjct: 1179 TFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEAL-DRACAGK 1237
Query: 185 TILIVHHDLSKVKEYFDDIIILNRELIAY---GPINENFSQKNLKKAYGDNIF 234
T ++V H LS ++ N +IA G + E S +L K Y D I+
Sbjct: 1238 TTIVVAHRLSTIR---------NAHVIAVIDDGKVAEQGSHSHLLKNYSDGIY 1281
ref|NP_009937.1|ADP1| Active transport ATPase; Adp1p >gi|113449|sp|P25371|ADP1_YEAST
PROBABLE ATP-DEPENDENT PERMEASE PRECURSOR
>gi|83202|pir||S19421 ATP-dependent permease ADP1
precursor - yeast (Saccharomyces cerevisiae)
>gi|1907154|emb|CAA42328| (X59720) YCR011c, len:1049
[Saccharomyces cerevisiae]
Length = 1049
Score = 77.6 bits (188), Expect = 9e-14
Identities = 73/239 (30%), Positives = 120/239 (49%), Gaps = 17/239 (7%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTL--IKAILNIVPH-SGEILING-EVSKKQL 68
E VL +I V PG+I I+G +GAGK+TL I A+ H SG I +NG + +K
Sbjct: 402 EETVLNEISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTGHVSGSIKVNGISMDRKSF 461
Query: 69 KK-IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYE 127
K I +V+Q + T + V E V L AK+ +RV + L+++ ++D +
Sbjct: 462 SKIIGFVDQDDFLLPT--LTVFETVLNSALLRLPKALSFEAKK-ARVYKVLEELRIIDIK 518
Query: 128 NRQIGE-----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLK-- 180
+R IG +SGG+ +RV +A LV +FLDEP G+D+ + +++ L L
Sbjct: 519 DRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSD 578
Query: 181 HQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAY--GDNIFIGD 237
+ +L +H S + FD +++L++ + Y + S+ + Y DN I D
Sbjct: 579 YNRTLVLSIHQPRSNIFYLFDKLVLLSKGEMVYSGNAKKVSEFLRNEGYICPDNYNIAD 637
emb|CAB08051| (Z94043) hypothetical protein [Bacillus subtilis]
>gi|2635995|emb|CAB15487| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 589
Score = 76.5 bits (185), Expect = 2e-13
Identities = 62/230 (26%), Positives = 112/230 (47%), Gaps = 24/230 (10%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGE-VSKKQLKK--- 70
+LK++ + G++T I+GP+G GK+TL K + P +G I + E V L+
Sbjct: 356 ILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLESWRE 415
Query: 71 -IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLL----D 125
I YV Q+S + ++E + G L + + E + +E +N + +
Sbjct: 416 HIGYVSQESPL---MSGTIRENICYG------LERDVTDAEIEKAAEMAYALNFIKELPN 466
Query: 126 YENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
+ ++GE LSGGQ QR+ +AR L++ + LDE +DS SEK + L+ L
Sbjct: 467 QFDTEVGERGIMLSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEKSVQQALEVLM- 525
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+G+T +++ H LS V + + + E+ G +E + L + + +
Sbjct: 526 EGRTTIVIAHRLSTVVDADQLLFVEKGEITGRGTHHELMASHGLYRDFAE 575
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 75.3 bits (182), Expect = 5e-13
Identities = 62/214 (28%), Positives = 111/214 (50%), Gaps = 16/214 (7%)
Query: 2 INTKNLNVFYNENK----VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGE 56
I +NL+ Y + + +QL + +I ++G NGAGKST I ++ ++P SG+
Sbjct: 449 IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGD 508
Query: 57 ILINGE---VSKKQLKKIAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGAKEWS 112
LI G + +++K V + DI FP + V+E + + + LK ++ K S
Sbjct: 509 ALILGNSIITNMDEIRKELGVCPQHDI--LFPELTVREHLEM--FAVLKGVEEGSLK--S 562
Query: 113 RVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
V + ++V L D N + LSGG +++ L L+ + I LDEP G+D S ++
Sbjct: 563 TVVDMAEEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLT 622
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIIL 206
+++ +K +G+ IL+ H + + +E D I I+
Sbjct: 623 WQLIKKIK-KGRIILLTTHSMDEAEELGDRIGIM 655
Score = 61.3 bits (146), Expect = 8e-09
Identities = 64/248 (25%), Positives = 120/248 (47%), Gaps = 28/248 (11%)
Query: 1 MINTKNLNVFYNENK------VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNI-VPH 53
M+ +NL Y +K ++ + V G G +G NGAGK+T + + P
Sbjct: 1380 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 1439
Query: 54 SGEILINGE---VSKKQLKK-IAYVEQKSDIDHTFP-IKVKECVSLGTYTGLKLFQKLGA 108
SG I G+ S K +++ I Y Q D F + VKE + L Y +K +
Sbjct: 1440 SGTAFIFGKDIVASPKAIRQHIGYCPQ---FDALFEYLTVKEHLEL--YARIK--GVVDH 1492
Query: 109 KEWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSIS 168
+ + V+E L + +LL + ++ LSGG +++ +A ++ + + LDEP G+D ++
Sbjct: 1493 RIDNVVTEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVA 1552
Query: 169 EKIIMDILQDLK-HQGKT-ILIVHHDLSKVKEYFDDI-IILNRELIAYGPINENFSQKNL 225
++ + D++ L GKT +++ H +++ + I I++ L G S ++L
Sbjct: 1553 KRFMWDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIG------SPQHL 1606
Query: 226 KKAYGDNI 233
K YG+++
Sbjct: 1607 KTRYGNHL 1614
gi|439854 (U04640) Pfmdr2 protein [Plasmodium falciparum]
Length = 1025
Score = 75.3 bits (182), Expect = 5e-13
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 34/230 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILING----EVSKKQLKKIA 72
LKDI + + PG ++G G+GK+T+ K + GEI I G E ++ ++ I
Sbjct: 705 LKDINIYIKPGTTCALVGHTGSGKTTISKLLYRFYDSKGEIKIGGRNINEYTRNSIRNII 764
Query: 73 YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYE----- 127
+ + I IK L+ KL A E + +A++ L D+
Sbjct: 765 GIVPQDTILFNESIKYNI-----------LYGKLDATE-EELIQAVKSAQLYDFIQSLPK 812
Query: 128 --NRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
+ +G+ LSGG+ QR+ +ARCL+++ + DE +DS +E + ++DL+
Sbjct: 813 KWDTLVGDKGVKLSGGERQRISIARCLLKDPKIVIFDEATSSLDSRTEYLFQKAVEDLR- 871
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+ +TI+I+ H L + + II+LN+ G I E + +L K G+
Sbjct: 872 KNRTIIIIAHKLCTITT-AELIILLNK-----GKIIERGTHLDLLKCNGE 915
gi|294167 (L13381) transport protein [Plasmodium falciparum]
Length = 947
Score = 75.3 bits (182), Expect = 5e-13
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 34/230 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILING----EVSKKQLKKIA 72
LKDI + + PG ++G G+GK+T+ K + GEI I G E ++ ++ I
Sbjct: 703 LKDINIYIKPGTTCALVGHTGSGKTTISKLLYRFYDSKGEIKIGGRNINEYTRNSIRNII 762
Query: 73 YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYE----- 127
+ + I IK L+ KL A E + +A++ L D+
Sbjct: 763 GIVPQDTILFNESIKYNI-----------LYGKLDATE-EELIQAVKSAQLYDFIQSLPK 810
Query: 128 --NRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
+ +G+ LSGG+ QR+ +ARCL+++ + DE +DS +E + ++DL+
Sbjct: 811 KWDTLVGDKGVKLSGGERQRISIARCLLKDPKIVIFDEATSSLDSRTEYLFQKAVEDLR- 869
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+ +TI+I+ H L + + II+LN+ G I E + +L K G+
Sbjct: 870 KNRTIIIIAHKLCTITT-AELIILLNK-----GKIIERGTHLDLLKCNGE 913
pir||S42925 probable transport protein - Staphylococcus aureus
>gi|459256|emb|CAA83065| (Z30588) Potential ABC
transporter [Staphylococcus aureus]
Length = 231
Score = 75.3 bits (182), Expect = 5e-13
Identities = 59/234 (25%), Positives = 117/234 (49%), Gaps = 23/234 (9%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVP-HSGEI-L 58
++ ++L +L+D+ ++ G+I G++G NGAGK+TL+K IL SG +
Sbjct: 3 VLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNFNV 62
Query: 59 INGEVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEAL 118
IN + K + A +E +P + Y LKL + +K + + +
Sbjct: 63 INSKDEKSNIG--ALIENPG----IYPF-------MSGYENLKLLNE--SKNTQDIDKIV 107
Query: 119 QKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQD 178
++++ +Y +++ S G Q++ +A + + +I LDEP G+D + + + +++
Sbjct: 108 SQLHMDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQ 167
Query: 179 LKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
+G T LI H LS++ + + I+I+N+ G I S++ LK+ + DN
Sbjct: 168 KAQEGVTFLISSHILSELVKITNSILIINK-----GKIVTETSEEELKQ-FKDN 215
gb|AAC45344.1| (AF100324) putative ATPase [Mycoplasma fermentans]
Length = 600
Score = 74.9 bits (181), Expect = 6e-13
Identities = 63/246 (25%), Positives = 111/246 (44%), Gaps = 27/246 (10%)
Query: 6 NLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVS 64
N++ + K +DI +++ G I +IG NGAGKSTL+ + + P G I +NG
Sbjct: 8 NISKSFGVIKANQDINIQIKKGTIHALIGENGAGKSTLLSILFGLYEPDHGIIKVNG--- 64
Query: 65 KKQLKKIAYVEQKSDIDHTFPIKVKECVSL-GTYTGL-----------KLFQKLGAKEWS 112
K + +D ++ V + L G YT L K F+ L K
Sbjct: 65 -----KEVLINNPNDANNLGIGMVHQHFKLVGAYTNLQNIILGAESESKTFKTLDYKPSI 119
Query: 113 RVSEALQKVNLLDYE-NRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKI 171
+ + +Q++ L+++ N+ G S Q+V + + L ++++ + DEP + +
Sbjct: 120 KKIKTIQRLFNLNFDLNKDTGTESVSTQQKVEIMKMLYRDSEILIFDEPTAVLTDEEIQG 179
Query: 172 IMDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+++ + K QGKTI+ + H L +VK D + I +G + NF N
Sbjct: 180 LLETFKLFKSQGKTIIFISHKLKEVKAVADYATV-----IRHGKVTGNFEVANTSIEEMA 234
Query: 232 NIFIGD 237
N +GD
Sbjct: 235 NRMVGD 240
Score = 43.4 bits (100), Expect = 0.002
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 134 LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHDL 193
LSGG Q+ ++ R + D+I + +P G+D + K I + + K +GK IL++ ++L
Sbjct: 493 LSGGNHQKFIVGREMNSPHDFILILQPTRGLDVGAIKNIHERILKEKAEGKAILLISYEL 552
Query: 194 SKVKEYFDDIIILN 207
+V D I ++N
Sbjct: 553 DEVLSLADTIAVIN 566
gb|AAB62237.1| (AF002180) TAP2 [Oncorhynchus mykiss]
Length = 712
Score = 73.4 bits (177), Expect = 2e-12
Identities = 59/230 (25%), Positives = 107/230 (45%), Gaps = 22/230 (9%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAYVE 75
LK + LE+ PG++T ++GP+G GKS+ ++ + + P G++L++G+ + Y+
Sbjct: 491 LKAVSLELHPGKMTALVGPSGGGKSSCVRLLARLYEPKEGQVLLDGQ--PLHCYQHQYLH 548
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY-------EN 128
QK + P+ + GL +G +V EA + N+ D+ +
Sbjct: 549 QKMALVSQEPVLFSGSIRHNIEYGL-----VGC-TLEKVKEAAKSANIHDFICTLEQGYD 602
Query: 129 RQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK 184
+GE LS GQ Q + +AR LV+E + LDE +D ++ + +L G
Sbjct: 603 TDVGECGGQLSSGQKQCIAIARALVREPQVLILDEATSSMDINTQHAVQGVLAG--SVGL 660
Query: 185 TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
T+L+V H L V++ I + E++ G E + K + +F
Sbjct: 661 TVLVVAHRLQTVEKADHIIFMEGGEVVEQGTHQELMASKGRYHRLKEKLF 710
sp|P06611|BTUD_ECOLI VITAMIN B12 TRANSPORT ATP-BINDING PROTEIN BTUD
>gi|72449|pir||QRECBD vitamin B12 transport protein btuD
- Escherichia coli >gi|145445 (M14031) peripheral
membrane component [Escherichia coli]
>gi|1742789|dbj|BAA15477| (D90813) Vitamin B12 transport
protein BtuD [Escherichia coli]
>gi|1742802|dbj|BAA15489| (D90814) Vitamin B12 transport
protein BtuD [Escherichia coli] >gi|1788002 (AE000266)
ATP-binding component of vitamin B12 transport system
[Escherichia coli]
Length = 249
Score = 72.6 bits (175), Expect = 3e-12
Identities = 68/234 (29%), Positives = 103/234 (43%), Gaps = 26/234 (11%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGE------VSKK 66
E+ L + EV G I ++GPNGAGKSTL+ + + G I G+ +K
Sbjct: 12 ESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKL 71
Query: 67 QLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
L + AY+ Q+ P+ Y L K + + V+ AL L D
Sbjct: 72 ALHR-AYLSQQQTPPFATPV--------WHYLTLHQHDKTRTELLNDVAGALA---LDDK 119
Query: 127 ENRQIGELSGGQFQRVLLARCLVQ-------EADYIFLDEPFVGIDSISEKIIMDILQDL 179
R +LSGG++QRV LA ++Q + LDEP +D + + IL L
Sbjct: 120 LGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSAL 179
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDN 232
QG I++ HDL+ + +L +++A G E + NL +AYG N
Sbjct: 180 CQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMN 233
dbj|BAA80916.1| (AP000062) 284aa long hypothetical ABC transporter ATP-binding
protein [Aeropyrum pernix]
Length = 284
Score = 72.2 bits (174), Expect = 4e-12
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGEVSKKQLK 69
Y VL + LEV G G++GPNGAGK+TLIK L + G +L+NG ++ +
Sbjct: 4 YRGQPVLDRVDLEVGRGEAVGLVGPNGAGKTTLIKVSLGLARRDGGRVLLNGLDPWREPR 63
Query: 70 K---IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY 126
+ V ++ ++ + P+ V+ S G SRV A++ L +
Sbjct: 64 AREGVGVVFERPNLPSSMPV-VEFLESAAAIIG---------SSPSRVDWAIRAAGLEGH 113
Query: 127 ENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL-KHQGKT 185
E + +LS G QR +A L+ E ++ DEP +D + + ++ +L L + G +
Sbjct: 114 EWKTFPQLSAGLKQRAAIAHALLGEPRFLVADEPTSNLDPLERREVLRLLARLNREHGLS 173
Query: 186 ILIVHHDLSKVKEYFDDIIIL-NRELIAYGPINENFSQKNLKKAYGDN 232
+L+ H + ++ I +L L A G + F + L + N
Sbjct: 174 LLVSSHVIVELLRVATRIYVLAGGRLAAEGSPEDLFRRAGLARLRTSN 221
emb|CAB05222.1| (Z82272) predicted using Genefinder; similar to ABC transporters (2
domains) [Caenorhabditis elegans]
Length = 1431
Score = 71.8 bits (173), Expect = 5e-12
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 31 GIIGPNGAGKSTLIKAILNI-VPHSGEILINGEVSKKQLKKIAYVEQKSDIDHTFPIKVK 89
G++G NGAGK+T I + +P G + I+G + + I Y Q F ++
Sbjct: 1158 GMLGANGAGKTTTFDIITGLTMPTGGRVTIDGHDISRTIH-IGYCPQ-------FDAMLQ 1209
Query: 90 ECVSLGTYTGLKLFQKLGAKEWSRVSEA----LQKVNLLDYENRQIGELSGGQFQRVLLA 145
+ T + FQ ++ VSE L V + D+ N+ + SGGQ +++ +
Sbjct: 1210 QISCRETLMIMAKFQG-----YANVSEVVDLVLDCVGMADFGNKLVKNCSGGQKRKISVG 1264
Query: 146 RCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK-TILIVHHDLSKVKEYFDDI- 203
L+ A I LDEP GID + + I DI+ +++ Q K +I++ H + + + I
Sbjct: 1265 IALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSHSMEECEALCTRIG 1324
Query: 204 IILNRELIAYGPINENFSQKNLKKAYGD 231
I+ N E+IA G + ++LK YG+
Sbjct: 1325 ILRNGEMIALG------TSQSLKSQYGN 1346
Score = 63.2 bits (151), Expect = 2e-09
Identities = 56/234 (23%), Positives = 104/234 (43%), Gaps = 17/234 (7%)
Query: 7 LNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEILINGEVSK 65
+ V+ N K + + L I G+++ ++G NG GKST I + + G ++I G +
Sbjct: 453 VKVYTNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGRVIIGGIDAN 512
Query: 66 KQL----KKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV 121
K I Y Q + + + + G KL K+ A LQ++
Sbjct: 513 SHRAAARKMIGYCPQYNPLYDKLTVMEHLKLVNALKGGSKLTFKVEA------DSLLQQI 566
Query: 122 NLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKH 181
L D + LSGG +++ + ++ + I LDEP G+D S +I + + L
Sbjct: 567 ELTDKRDTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDP-SARIDVQRMLALVK 625
Query: 182 QGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIFI 235
+TIL+ H + + ++ D I ++ ++G + + S LK+ YG + +
Sbjct: 626 ADRTILLTTHYMDEAEKLGDWIFVM-----SHGKMAASGSNHYLKQKYGSGMLL 674
gb|AAC69223| (AF101313) similar to the ATP-binding transport protein family (ABC
transporter) (Pfam: ABC_tran.hmm, score: 162.68 and
139.46) [Caenorhabditis elegans]
Length = 1802
Score = 71.8 bits (173), Expect = 5e-12
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKI 71
E + + ++ L++ PG+ T ++G NGAGKST + + P SG +N + L KI
Sbjct: 611 EKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVNDFDIRTSLPKI 670
Query: 72 AYVEQKSDIDHTFPIKVKECVSLGTYTG-------LKLFQKLGAKEWS--RVSEALQKVN 122
++ C T G L+ F KL + W E L ++
Sbjct: 671 RR-------------EMGLCPQYNTLFGFMTVMEHLEFFAKLKERTWDPEEAREILARLR 717
Query: 123 LLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQ 182
+ + G LSGGQ +++ LA L+ ++ + LDEP G+D + ++Q K +
Sbjct: 718 IDFKADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQREKER 777
Query: 183 GKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGD 231
+TIL+ H + + D I I+ A+G + S LK+ YGD
Sbjct: 778 -RTILLTTHFMEEADLLGDRIAIM-----AHGQLECCGSPMFLKQQYGD 820
Score = 65.6 bits (157), Expect = 4e-10
Identities = 57/234 (24%), Positives = 103/234 (43%), Gaps = 20/234 (8%)
Query: 4 TKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAIL--NIVPHSGEILING 61
+ NL +Y +K + V G++G NGAGK++ + + N + SG+ +NG
Sbjct: 1452 SNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSIS-SGDAYVNG 1510
Query: 62 EVSKKQLKKIA----YVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEW-SRVSE 116
K ++ Y Q I +KE T + + K+ +V+
Sbjct: 1511 WSVKNNWREAGANTGYCPQYDAI-------IKEMSGEETLYMFARIRGIPEKDIPKKVNA 1563
Query: 117 ALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDIL 176
+ + + Y +RQI SGG +R+ L +V D + LDEP G+D + +II +IL
Sbjct: 1564 VIHAIGIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNIL 1623
Query: 177 QDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYG 230
L+ G +++ H + + + ++ I+ YG S +++K YG
Sbjct: 1624 NRLRDLGTALVLTSHSMDECEALCTELAIM-----VYGKFRCYGSCQHIKSRYG 1672
emb|CAA21885.1| (AL033385) abc transporter [Schizosaccharomyces pombe]
Length = 1035
Score = 71.0 bits (171), Expect = 9e-12
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 37/233 (15%)
Query: 27 GRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING----EVSKKQL-KKIAYVEQKSDI 80
G + IIGP+G+GKST I +L P G I ++ E+ + L I V Q+ I
Sbjct: 161 GELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVI 220
Query: 81 DHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE-ALQKVNLLDYENR-----QIGEL 134
F + ++E + + + ++ V AL L ++ + L
Sbjct: 221 ---FDMTIRENIIMRN-------ENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASL 270
Query: 135 SGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHDLS 194
SGGQ QR+ LAR L+++ + + LDEP +D I++ ++MD ++ +GKT L++ HD+S
Sbjct: 271 SGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIR-AHRKGKTTLVITHDMS 329
Query: 195 KVKEYFDDIIIL-----------NRELIAYGPINENFS-QKNLKKAYGDNIFI 235
++ D+++++ +EL+ + N S + + K DN FI
Sbjct: 330 QINN--DELVLVIDKGHLIQRCARKELVLFEDFENNVSIDEKVLKEEADNPFI 380
Score = 60.5 bits (144), Expect = 1e-08
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGEV-----SKKQLKKI 71
L ++ L + I+G +G+GKSTL++ + P S +I I+G + LKK+
Sbjct: 817 LNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYP-SEDIYIDGYPLTNIDTNWLLKKV 875
Query: 72 AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV-NLLDYENRQ 130
A V+QK H + E + G + + A + + ++E +Q + N LD +
Sbjct: 876 AIVDQKP---HLLGSTILESLLYGVDRDIN--SVMDALDKTYMTEVIQNLPNGLDTPLLE 930
Query: 131 IGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
+ SGGQ QR+ AR L++ + LDE +DS S ++ +Q+L T+LI+
Sbjct: 931 FSKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNL---SCTVLII 987
Query: 190 HHDLSKVKEYFDDIIILNRELI 211
H S +K D II+++ ++
Sbjct: 988 THQPSLMK-LADRIIVMDSGIV 1008
emb|CAA16126.1| (AL021287) hypothetical protein Rv3041c [Mycobacterium
tuberculosis]
Length = 287
Score = 71.0 bits (171), Expect = 9e-12
Identities = 60/247 (24%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 1 MINTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIK-AILNIVPHSGEILI 59
+I+ +N+++ N ++ + V I+GPNGAGK++L++ A P SG +
Sbjct: 21 LIDFRNVSLRRNGRTLVGPLDWAVELDERWVIVGPNGAGKTSLLRIAAAAEHPSSGVAFV 80
Query: 60 NGEVSKKQLKKIAYVEQKSDIDHTFPI---------KVKECVSLGTYTGLKLF-QKLGAK 109
GE +L ++ E ++ + + +V++ V Y L + ++ A
Sbjct: 81 LGE----RLGRVDVSELRARVGLSSSALAERVPGDERVRDLVVSAGYAVLGRWRERYEAV 136
Query: 110 EWSRVSEALQKVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISE 169
++ R + L+ + NR G LS G+ +RVL+AR L+ + + + LDEP G+D
Sbjct: 137 DYHRAIDMLESLGAEHLANRTYGTLSEGERKRVLIARALMTDPELLLLDEPAAGLDLGGR 196
Query: 170 KIIMDILQDL--KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLK 226
+ ++ L DL +++V H + ++ F ++L+ ++A G + + + +NL
Sbjct: 197 EELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCLLLSEARVVAAGLLPDALTAENLS 256
Query: 227 KAYGDNI 233
A+G I
Sbjct: 257 TAFGQEI 263
gi|1698672 (U66305) ABC transporter [Schizosaccharomyces pombe]
>gi|3738205|emb|CAA21260.1| (AL031853) abc transporter
[Schizosaccharomyces pombe]
Length = 1336
Score = 71.0 bits (171), Expect = 9e-12
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 37/233 (15%)
Query: 27 GRITGIIGPNGAGKSTLIKAILNIV-PHSGEILING----EVSKKQL-KKIAYVEQKSDI 80
G + IIGP+G+GKST I +L P G I ++ E+ + L I V Q+ I
Sbjct: 462 GELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVI 521
Query: 81 DHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSE-ALQKVNLLDYENR-----QIGEL 134
F + ++E + + + ++ V AL L ++ + L
Sbjct: 522 ---FDMTIRENIIMRN-------ENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASL 571
Query: 135 SGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIVHHDLS 194
SGGQ QR+ LAR L+++ + + LDEP +D I++ ++MD ++ +GKT L++ HD+S
Sbjct: 572 SGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIR-AHRKGKTTLVITHDMS 630
Query: 195 KVKEYFDDIIIL-----------NRELIAYGPINENFS-QKNLKKAYGDNIFI 235
++ D+++++ +EL+ + N S + + K DN FI
Sbjct: 631 QINN--DELVLVIDKGHLIQRCARKELVLFEDFENNVSIDEKVLKEEADNPFI 681
Score = 60.5 bits (144), Expect = 1e-08
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGEV-----SKKQLKKI 71
L ++ L + I+G +G+GKSTL++ + P S +I I+G + LKK+
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYP-SEDIYIDGYPLTNIDTNWLLKKV 1176
Query: 72 AYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKV-NLLDYENRQ 130
A V+QK H + E + G + + A + + ++E +Q + N LD +
Sbjct: 1177 AIVDQKP---HLLGSTILESLLYGVDRDIN--SVMDALDKTYMTEVIQNLPNGLDTPLLE 1231
Query: 131 IGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILIV 189
+ SGGQ QR+ AR L++ + LDE +DS S ++ +Q+L T+LI+
Sbjct: 1232 FSKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNL---SCTVLII 1288
Query: 190 HHDLSKVKEYFDDIIILNRELI 211
H S +K D II+++ ++
Sbjct: 1289 THQPSLMK-LADRIIVMDSGIV 1309
gi|1166606 (U46673) Similar to multidrug-resistance protein; coded for by C.
elegans cDNA yk13b2.3; coded for by C. elegans cDNA
yk13b2.5; coded for by C. elegans cDNA yk23f10.3; coded
for by C. elegans cDNA yk23f10.5 [Caenorhabditis
elegans]
Length = 1283
Score = 70.6 bits (170), Expect = 1e-11
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 25/234 (10%)
Query: 13 ENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKI 71
E +VL+ I +V G I+G +G+GKSTL +L P G IL++GE K
Sbjct: 364 ETEVLRGISFKVEAGEKIAIVGSSGSGKSTLTALLLRFYDPTKGAILLDGENIKTMCP-- 421
Query: 72 AYVEQKSDIDHTFPIKVKECVSL-GTYTGLKLFQKLGAKEWSRVSEALQKV-------NL 123
D+ + +E V GT + + +L A + +++A +KV +L
Sbjct: 422 ------DDLRGQCSLVSQEPVLFDGTISDNIRYGRLDATQ-QEINDAARKVGAWKFINSL 474
Query: 124 LDYENRQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
D ++GE LSGGQ QRV +AR ++++ + DE +D+I E+ + + DL
Sbjct: 475 PDGMQTRVGERGHQLSGGQKQRVAIARAVIRKPIVLIFDEATSALDNIHEEEVNAAI-DL 533
Query: 180 KHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKN--LKKAYGD 231
+G T + + H LS +K I++ +++ G +E + N K Y D
Sbjct: 534 ASEGLTTITIAHRLSTIKNSDRIIVLHEGKIVEEGVPDELIADANGIFHKMYND 587
Score = 66.7 bits (160), Expect = 2e-10
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 16 VLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEILINGEVSKKQLKK----- 70
VL ++ L+V G ++GP+G+GKS++I + + ++I + + K +
Sbjct: 1057 VLTNLNLKVRGGESIALVGPSGSGKSSVISLFQRMYNATDGVVIIDKYNIKSINPAYLRR 1116
Query: 71 -IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLL----D 125
I V Q+ D+ F +KE ++ G K+ E +++++ + L D
Sbjct: 1117 CIVQVGQEPDL---FSFTIKENIAFGMMESEATIDKV--IEAAKIADIHNFITSLPQGYD 1171
Query: 126 YENRQIG-ELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK 184
E + G +LSGGQ QR+ +AR ++++ + LDE +DS SE+ + + + +K K
Sbjct: 1172 TEVGEFGAQLSGGQKQRIAIARAIIRKPTVLLLDEATSALDSASEREVQNAFERVKRSTK 1231
Query: 185 ---TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNL 225
T + + H LS ++ +I++ E+ G + + K +
Sbjct: 1232 TQCTCIQIAHRLSTIRNVDKIYVIVHGEIAEEGSHEQLINLKGI 1275
dbj|BAA29272.1| (AP000001) 362aa long hypothetical maltose/maltodextrin transport
ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 69.9 bits (168), Expect = 2e-11
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 11/240 (4%)
Query: 2 INTKNLNVFYNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILIN 60
I +N+ + L +I L++ G ++GP+G+GKSTL+ I I P SG+I +
Sbjct: 4 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFD 63
Query: 61 GEVSKKQLKKIAYVEQKSD-IDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQ 119
+K + ++ ++ + + + V L+L + + +V E +
Sbjct: 64 ----EKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAK 119
Query: 120 KVNLLDYENRQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDL 179
+++ NR +LSGGQ QRV +AR LV+E + + LDEP +D++ + L+ L
Sbjct: 120 MLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
Query: 180 -KHQGKTILIVHHDLSKVKEYFDDIIILNR-ELIAYGPINENFSQKNLKKAYGDNIFIGD 237
K G T + V HD ++ D I ++ E++ G +E + + K G F+G+
Sbjct: 180 QKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGG---FLGN 236
dbj|BAA28332| (AB010293) ATP binding component of ABC-transporter [Escherichia
coli]
Length = 431
Score = 69.9 bits (168), Expect = 2e-11
Identities = 61/226 (26%), Positives = 95/226 (41%), Gaps = 21/226 (9%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLK 69
+++ VLKDI + PG GI+G NGAGKSTL+K + P G I I G V+
Sbjct: 34 HSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGSIEIQGRVA----- 88
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK-VNLLDYEN 128
A +E F + +S L LG +E R+ ++ ++ DY
Sbjct: 89 --ALLELGMGFHPDFTGRQNVYMS-------GLMMGLGREEIERLMPEIEAFADIGDYIE 139
Query: 129 RQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILI 188
+ S G R+ A D + +DE DS + + D K QG T+L+
Sbjct: 140 EPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADFKEQGTTLLL 199
Query: 189 VHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
V H + ++ D I L G I + + +++ Y D +F
Sbjct: 200 VSHSAGDIVKHCDRAIFLKN-----GDICMDGTARDVTNRYLDELF 240
pir||I76773 ATP binding component of ABC-transporter - Escherichia coli
>gi|598468|dbj|BAA07748| (D43637) putative ATP binding
component of ABC-transporter [Escherichia coli]
Length = 431
Score = 69.9 bits (168), Expect = 2e-11
Identities = 61/226 (26%), Positives = 95/226 (41%), Gaps = 21/226 (9%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLK 69
+++ VLKDI + PG GI+G NGAGKSTL+K + P G I I G V+
Sbjct: 34 HSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGSIEIQGRVA----- 88
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK-VNLLDYEN 128
A +E F + +S L LG +E R+ ++ ++ DY
Sbjct: 89 --ALLELGMGFHPDFTGRQNVYMS-------GLMMGLGREEIERLMPEIEAFADIGDYIE 139
Query: 129 RQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILI 188
+ S G R+ A D + +DE DS + + D K QG T+L+
Sbjct: 140 EPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADFKEQGTTLLL 199
Query: 189 VHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
V H + ++ D I L G I + + +++ Y D +F
Sbjct: 200 VSHSAGDIVKHCDRAIFLKN-----GDICMDGTARDVTNRYLDELF 240
emb|CAA76658.2| (Y17151) multidrug resistance protein 3 (ABCC3) [Homo sapiens]
Length = 1527
Score = 69.5 bits (167), Expect = 3e-11
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI-LINGEVSKKQLKKIAYVE 75
L + ++V G + ++GP G GKS+L+ A+L GE+ + G+V K +AYV
Sbjct: 644 LHSLDIQVPKGALVAVVGPVGCGKSSLVSALL------GEMEKLEGKVHMKG--SVAYVP 695
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY----ENRQI 131
Q++ I + ++E V G + L K + + EA + L+ + +I
Sbjct: 696 QQAWIQNC---TLQENVLFG--------KALNPKRYQQTLEACALLADLEMLPGGDQTEI 744
Query: 132 GE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD--ILQDLKHQGKT 185
GE LSGGQ QRV LAR + +AD LD+P +DS K I D I + GKT
Sbjct: 745 GEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKT 804
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGP 215
++V H +S + + I++ + ++ GP
Sbjct: 805 RVLVTHGISFLPQTDFIIVLADGQVSEMGP 834
Score = 57.4 bits (136), Expect = 1e-07
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEIL 58
+ +N +V Y + VL+D+ L V G GI+G GAGKS++ + I+ + GEI
Sbjct: 1289 VEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIR 1348
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G ++ L+ + + I + +++ G+Y+ ++ L E S +
Sbjct: 1349 IDGLNVADIGLHDLRSQLTIIPQDPILFSGTLRMN-LDPFGSYSEEDIWWAL---ELSHL 1404
Query: 115 SEALQKVNL-LDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ LD++ + GE LS GQ Q V LAR L++++ + LDE ID ++ +I
Sbjct: 1405 HTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLI 1464
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
++ + T+L + H L+ + +Y +++L++ ++A E S NL A G
Sbjct: 1465 QATIR-TQFDTCTVLTIAHRLNTIMDY-TRVLVLDKGVVA-----EFDSPANLIAARG-- 1515
Query: 233 IFIG 236
IF G
Sbjct: 1516 IFYG 1519
sp|O15438|MRP3_HUMAN CANALICULAR MULTISPECIFIC ORGANIC ANION TRANSPORTER 2 (MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 3)
>gi|4106440|gb|AAD02845.1| (AF085690) multidrug
resistance-associated protein 3 [Homo sapiens]
>gi|4140700 (AF104943) ABC transporter MOAT-D [Homo
sapiens]
Length = 1527
Score = 69.5 bits (167), Expect = 3e-11
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI-LINGEVSKKQLKKIAYVE 75
L + ++V G + ++GP G GKS+L+ A+L GE+ + G+V K +AYV
Sbjct: 644 LHSLDIQVPKGALVAVVGPVGCGKSSLVSALL------GEMEKLEGKVHMKG--SVAYVP 695
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY----ENRQI 131
Q++ I + ++E V G + L K + + EA + L+ + +I
Sbjct: 696 QQAWIQNC---TLQENVLFG--------KALNPKRYQQTLEACALLADLEMLPGGDQTEI 744
Query: 132 GE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD--ILQDLKHQGKT 185
GE LSGGQ QRV LAR + +AD LD+P +DS K I D I + GKT
Sbjct: 745 GEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKT 804
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGP 215
++V H +S + + I++ + ++ GP
Sbjct: 805 RVLVTHGISFLPQTDFIIVLADGQVSEMGP 834
Score = 57.4 bits (136), Expect = 1e-07
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEIL 58
+ +N +V Y + VL+D+ L V G GI+G GAGKS++ + I+ + GEI
Sbjct: 1289 VEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIR 1348
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G ++ L+ + + I + +++ G+Y+ ++ L E S +
Sbjct: 1349 IDGLNVADIGLHDLRSQLTIIPQDPILFSGTLRMN-LDPFGSYSEEDIWWAL---ELSHL 1404
Query: 115 SEALQKVNL-LDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ LD++ + GE LS GQ Q V LAR L++++ + LDE ID ++ +I
Sbjct: 1405 HTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLI 1464
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
++ + T+L + H L+ + +Y +++L++ ++A E S NL A G
Sbjct: 1465 QATIR-TQFDTCTVLTIAHRLNTIMDY-TRVLVLDKGVVA-----EFDSPANLIAARG-- 1515
Query: 233 IFIG 236
IF G
Sbjct: 1516 IFYG 1519
gb|AAD01430.1| (AF009670) MRP3 [Homo sapiens]
Length = 1528
Score = 69.5 bits (167), Expect = 3e-11
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI-LINGEVSKKQLKKIAYVE 75
L + ++V G + ++GP G GKS+L+ A+L GE+ + G+V K +AYV
Sbjct: 645 LHSLDIQVPKGALVAVVGPVGCGKSSLVSALL------GEMEKLEGKVHMKG--SVAYVP 696
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY----ENRQI 131
Q++ I + ++E V G + L K + + EA + L+ + +I
Sbjct: 697 QQAWIQNC---TLQENVLFG--------KALNPKRYQQTLEACALLADLEMLPGGDQTEI 745
Query: 132 GE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD--ILQDLKHQGKT 185
GE LSGGQ QRV LAR + +AD LD+P +DS K I D I + GKT
Sbjct: 746 GEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKT 805
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGP 215
++V H +S + + I++ + ++ GP
Sbjct: 806 RVLVTHGISFLPQTDFIIVLADGQVSEMGP 835
Score = 57.4 bits (136), Expect = 1e-07
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEIL 58
+ +N +V Y + VL+D+ L V G GI+G GAGKS++ + I+ + GEI
Sbjct: 1290 VEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIR 1349
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G ++ L+ + + I + +++ G+Y+ ++ L E S +
Sbjct: 1350 IDGLNVADIGLHDLRSQLTIIPQDPILFSGTLRMN-LDPFGSYSEEDIWWAL---ELSHL 1405
Query: 115 SEALQKVNL-LDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ LD++ + GE LS GQ Q V LAR L++++ + LDE ID ++ +I
Sbjct: 1406 HTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLI 1465
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
++ + T+L + H L+ + +Y +++L++ ++A E S NL A G
Sbjct: 1466 QATIR-TQFDTCTVLTIAHRLNTIMDY-TRVLVLDKGVVA-----EFDSPANLIAARG-- 1516
Query: 233 IFIG 236
IF G
Sbjct: 1517 IFYG 1520
ref|NP_003777.1|| ATP-binding cassette, sub-family C (CFTR/MRP), member 3 >gi|3550324
(AF083552) canalicular multispecific organic anion
transporter 2 [Homo sapiens]
Length = 1527
Score = 69.5 bits (167), Expect = 3e-11
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI-LINGEVSKKQLKKIAYVE 75
L + ++V G + ++GP G GKS+L+ A+L GE+ + G+V K +AYV
Sbjct: 644 LHSLDIQVPKGALVAVVGPVGCGKSSLVSALL------GEMEKLEGKVHMKG--SVAYVP 695
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY----ENRQI 131
Q++ I + ++E V G + L K + + EA + L+ + +I
Sbjct: 696 QQAWIQNC---TLQENVLFG--------KALNPKRYQQTLEACALLADLEMLPGGDQTEI 744
Query: 132 GE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD--ILQDLKHQGKT 185
GE LSGGQ QRV LAR + +AD LD+P +DS K I D I + GKT
Sbjct: 745 GEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKT 804
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGP 215
++V H +S + + I++ + ++ GP
Sbjct: 805 RVLVTHGISFLPQTDFIIVLADGQVSEMGP 834
Score = 56.2 bits (133), Expect = 3e-07
Identities = 65/244 (26%), Positives = 120/244 (48%), Gaps = 22/244 (9%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEIL 58
+ +N +V Y + VL+D+ L V G GI+G GAGKS++ + I+ + GEI
Sbjct: 1289 VEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIR 1348
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G ++ ++ + + I + +++ G+Y+ ++ L E S +
Sbjct: 1349 IDGLNVADIGLHDVRSQLTIIPQDPILFSGTLRMN-LDPFGSYSEEDIWWAL---ELSHL 1404
Query: 115 SEALQKVNL-LDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ LD++ + GE LS GQ Q V LAR L++++ + LDE ID ++ +I
Sbjct: 1405 HTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLI 1464
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
++ + T+L + H L+ + +Y +++L++ ++A E S NL A G
Sbjct: 1465 QATIR-TQFDTCTVLTIAHRLNTIMDY-TRVLVLDKGVVA-----EFDSPANLIAARG-- 1515
Query: 233 IFIG 236
IF G
Sbjct: 1516 IFYG 1519
dbj|BAA28340| (AB010295) ATP binding component of ABC-transporter [Klebsiella
pneumoniae] >gi|3142235|dbj|BAA28344| (AB010296) ATP
binding component of ABC-transporter [Klebsiella
pneumoniae]
Length = 431
Score = 69.5 bits (167), Expect = 3e-11
Identities = 61/226 (26%), Positives = 95/226 (41%), Gaps = 21/226 (9%)
Query: 11 YNENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLK 69
+++ VLKDI + PG GI+G NGAGKSTL+K + P G I I G V+
Sbjct: 34 HSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGSIEIQGRVA----- 88
Query: 70 KIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQK-VNLLDYEN 128
A +E F + +S L LG +E R+ ++ ++ DY
Sbjct: 89 --ALLELGMGFHPDFTGRQNVYMS-------GLMMGLGREEIERLMPEIEAFADIGDYIE 139
Query: 129 RQIGELSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGKTILI 188
+ S G R+ A D + +DE DS + + D K QG T+L+
Sbjct: 140 EPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADFKKQGTTLLL 199
Query: 189 VHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
V H + ++ D I L G I + + +++ Y D +F
Sbjct: 200 VSHSAGDIVKHCDRAIFLKN-----GDICMDGTARDVTNRYLDELF 240
dbj|BAA28146| (AB010887) multidrug resistance-associated protein(MRP)-like
protein-2 (MLP-2) [Homo sapiens]
Length = 1527
Score = 69.5 bits (167), Expect = 3e-11
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHSGEI-LINGEVSKKQLKKIAYVE 75
L + ++V G + ++GP G GKS+L+ A+L GE+ + G+V K +AYV
Sbjct: 644 LHSLDIQVPKGALVAVVGPVGCGKSSLVSALL------GEMEKLEGKVHMKG--SVAYVP 695
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY----ENRQI 131
Q++ I + ++E V G + L K + + EA + L+ + +I
Sbjct: 696 QQAWIQNC---TLQENVLFG--------KALNPKRYQQTLEACALLADLEMLPGGDQTEI 744
Query: 132 GE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMD--ILQDLKHQGKT 185
GE LSGGQ QRV LAR + +AD LD+P +DS K I D I + GKT
Sbjct: 745 GEKGINLSGGQRQRVSLARAVYSDADIFLLDDPLSAVDSHVAKHIFDHVIGPEGVLAGKT 804
Query: 186 ILIVHHDLSKVKEYFDDIIILNRELIAYGP 215
++V H +S + + I++ + ++ GP
Sbjct: 805 RVLVTHGISFLPQTDFIIVLADGQVSEMGP 834
Score = 57.4 bits (136), Expect = 1e-07
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPHS-GEIL 58
+ +N +V Y + VL+D+ L V G GI+G GAGKS++ + I+ + GEI
Sbjct: 1289 VEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIR 1348
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G ++ L+ + + I + +++ G+Y+ ++ L E S +
Sbjct: 1349 IDGLNVADIGLHDLRSQLTIIPQDPILFSGTLRMN-LDPFGSYSEEDIWWAL---ELSHL 1404
Query: 115 SEALQKVNL-LDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKII 172
+ LD++ + GE LS GQ Q V LAR L++++ + LDE ID ++ +I
Sbjct: 1405 HTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLI 1464
Query: 173 MDILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDN 232
++ + T+L + H L+ + +Y +++L++ ++A E S NL A G
Sbjct: 1465 QATIR-TQFDTCTVLTIAHRLNTIMDY-TRVLVLDKGVVA-----EFDSPANLIAARG-- 1515
Query: 233 IFIG 236
IF G
Sbjct: 1516 IFYG 1519
gi|1518137 (U66261) multidrug resistance related protein 2 [Caenorhabditis
elegans]
Length = 1525
Score = 69.5 bits (167), Expect = 3e-11
Identities = 62/209 (29%), Positives = 107/209 (50%), Gaps = 24/209 (11%)
Query: 12 NENKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIVPH-SGEILINGEVSKKQLKK 70
+E+ L++I ++ G++ I+G G+GKS+L+ A+L + SG + ING
Sbjct: 626 DEDPTLREISFKIQKGQLVAIVGKVGSGKSSLLHALLGEMNKLSGSVQINGN-------- 677
Query: 71 IAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDYENRQ 130
IAYV Q++ I + + ++ + L+ ++ + + E L NL + +
Sbjct: 678 IAYVPQQAWIQN---MSLRNNILFNKPYDLENYEDVVKN--CALKEDL--ANLPAGDRTE 730
Query: 131 IGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDS-ISEKIIMDILQDLKH--QG 183
IGE LSGGQ QRV LAR + Q D I LD+P +DS + + I +++
Sbjct: 731 IGEKGINLSGGQKQRVSLARAVYQNPDIILLDDPLSAVDSHVGKHIFENVISSSTGCLAS 790
Query: 184 KTILIVHHDLSKVKEYFDDIIILNRELIA 212
KT ++V H L+ +K + D +I+L I+
Sbjct: 791 KTRVLVTHGLTYLK-HCDQLIVLKEGTIS 818
Score = 61.7 bits (147), Expect = 6e-09
Identities = 65/241 (26%), Positives = 119/241 (48%), Gaps = 19/241 (7%)
Query: 2 INTKNLNVFYNE--NKVLKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEIL 58
I+ KN +V Y + VL I + P GI+G GAGKS+L A+ I+ G I
Sbjct: 1286 ISIKNFSVRYRPGLDLVLHGISAHIAPSEKVGIVGRTGAGKSSLTLALFRIIEADGGSIE 1345
Query: 59 ING----EVSKKQLKKIAYVEQKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRV 114
I+G + +QL+ + + + + +K+ Y+ ++++ L
Sbjct: 1346 IDGINIANLQLEQLRSCLTIVPQDPVLFSGTMKM-NLDPFSAYSDSQVWEALENAHLKPF 1404
Query: 115 SEALQKVNLLDYENRQIGE-LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIM 173
++LQ + L+++ + GE LS GQ Q + LAR L+++ + LDE +D ++ +I
Sbjct: 1405 VKSLQ--DGLEHKISKGGENLSVGQRQLICLARALLRKTKVLVLDEAAAAVDVETDSLIQ 1462
Query: 174 DILQDLKHQGKTILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNI 233
+++ + + T+L + H L+ V + D +++L++ G + E S KNL A D I
Sbjct: 1463 KTIRE-QFKECTVLTIAHRLNTVMD-SDRLLVLDK-----GRVAEFDSPKNL-LANPDGI 1514
Query: 234 F 234
F
Sbjct: 1515 F 1515
gb|AAD53034.1|AF115537_1 (AF115537) TAP2 protein [Oncorhynchus mykiss]
Length = 713
Score = 69.1 bits (166), Expect = 3e-11
Identities = 57/230 (24%), Positives = 105/230 (44%), Gaps = 22/230 (9%)
Query: 17 LKDIQLEVIPGRITGIIGPNGAGKSTLIKAILNIV-PHSGEILINGEVSKKQLKKIAYVE 75
LK + LE+ PG++T ++GP+G GKS+ + + + P G++L++G+ + Y+
Sbjct: 492 LKAVSLELHPGKMTALVGPSGGGKSSCVSLLARLYEPKEGQVLLDGQ--PLHCYQHQYLH 549
Query: 76 QKSDIDHTFPIKVKECVSLGTYTGLKLFQKLGAKEWSRVSEALQKVNLLDY-------EN 128
QK + P+ + GL +G +V +A + N+ D+ +
Sbjct: 550 QKMALVSQEPVLFSGSIRHNIEYGL-----VGC-TLEKVKKAAKSANIHDFICTLEQGYD 603
Query: 129 RQIGE----LSGGQFQRVLLARCLVQEADYIFLDEPFVGIDSISEKIIMDILQDLKHQGK 184
+GE LS GQ + +AR LV+E + LDE +D ++ + +L G
Sbjct: 604 TDVGECGGQLSSGQKHCIAIARALVREPQVLILDEATSSMDINTQHAVQGVLAG--SVGL 661
Query: 185 TILIVHHDLSKVKEYFDDIIILNRELIAYGPINENFSQKNLKKAYGDNIF 234
T+L+V H L V++ I + E++ G E + K + +F
Sbjct: 662 TVLVVAHRLQTVEKADHIIFMEGGEVVEQGTHQELMASKGRYHRLKEKLF 711
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.319 0.141 0.395
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64112968
Number of Sequences: 457798
Number of extensions: 2619504
Number of successful extensions: 15218
Number of sequences better than 1.0e-02: 2091
Number of HSP's better than 0.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 831
Number of HSP's that attempted gapping in prelim test: 10686
Number of HSP's gapped (non-prelim): 3092
length of query: 237
length of database: 140,871,481
effective HSP length: 55
effective length of query: 182
effective length of database: 115,692,591
effective search space: 21056051562
effective search space used: 21056051562
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 94 (41.0 bits)