Score E
Sequences producing significant alignments: (bits) Value
emb|CAB65653.1| (AJ252161) putative maltose transport membr... 167 1e-40
pir||S63616 malG protein homolog cymG - Klebsiella oxytoca ... 167 1e-40
emb|CAB08007| (Z94043) hypothetical protein [Bacillus subti... 158 5e-38
emb|CAB08038| (Z94043) hypothetical protein [Bacillus subti... 155 4e-37
sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE... 148 7e-35
gb|AAD36899.1|AE001820_8 (AE001820) maltose ABC transporter... 125 6e-28
sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE ... 124 8e-28
gi|2828822 (AF012836) inner membrane protein MalG [Thermoco... 124 1e-27
emb|CAA08866.1| (AJ009832) putative transmembrane sugar tra... 123 1e-27
gb|AAF10143.1|AE001914_5 (AE001914) maltose ABC transporter... 122 3e-27
sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE ... 120 1e-26
sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROT... 116 2e-25
gb|AAD36277.1|AE001777_3 (AE001777) maltose ABC transporter... 116 3e-25
sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROT... 115 7e-25
sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROT... 114 1e-24
pir||A56641 probable membrane transport protein - Clostridi... 113 2e-24
emb|CAB59597.1| (AL132662) probable sugar transport inner m... 112 3e-24
gb|AAF11008.1|AE001988_4 (AE001988) ABC transporter, permea... 111 6e-24
dbj|BAA29846| (AP000003) 279aa long hypothetical sugar tran... 111 1e-23
dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris] 108 8e-23
gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium mel... 106 2e-22
emb|CAA68974| (Y07706) putative maltose permease [Streptomy... 104 7e-22
emb|CAB46387.1| (AL096743) putative integral membrane trans... 104 1e-21
emb|CAA17253| (AL021899) hypothetical protein Rv2039c [Myco... 104 1e-21
emb|CAB07809| (Z93773) permease [Thermus sp. T2] 104 1e-21
emb|CAB72190.1| (AL138851) putative sugar transporter inner... 103 2e-21
emb|CAA15893| (AL021006) sugB [Mycobacterium tuberculosis] 103 2e-21
emb|CAB11327| (Z98604) possible transport protein [Mycobact... 102 4e-21
emb|CAA19796| (AL031013) putative transmembrane sugar trans... 102 5e-21
gb|AAD35515.1|AE001721_14 (AE001721) sugar ABC transporter,... 101 6e-21
emb|CAB49103.1| (AJ248283) MALTOSE TRANSPORT SYSTEM PERMEAS... 100 2e-20
gb|AAD35367.1|AE001710_2 (AE001710) sugar ABC transporter, ... 100 2e-20
emb|CAB61916.1| (AL133278) putative transport system permea... 99 3e-20
emb|CAB71835.1| (AL138662) putative sugar transport inner m... 99 4e-20
emb|CAB71198.1| (AL138538) putative sugar transport inner m... 99 4e-20
emb|CAB70939.1| (AL137778) putative transport system inner ... 99 4e-20
sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE ... 99 5e-20
gi|1163114 (U43526) ORF-4 [Streptococcus pneumoniae] 98 9e-20
emb|CAB03652| (Z81331) ugpE [Mycobacterium tuberculosis] 98 1e-19
dbj|BAA78949.1| (AP000058) 302aa long hypothetical multiple... 97 2e-19
dbj|BAA17913| (D90910) lactose transport system permease pr... 97 2e-19
emb|CAA20605.1| (AL031514) putative sugar transport system ... 96 4e-19
gi|2435437 (AF016588) putative integral membrane component ... 96 4e-19
gi|3342712 (U22894) integral membrane protein [Streptomyces... 95 6e-19
gi|699148 (U15180) maltose transport inner membrane protein... 95 8e-19
gb|AAD36915.1|AE001822_8 (AE001822) sugar ABC transporter, ... 94 1e-18
emb|CAA99594.1| (Z75208) hypothetical protein [Bacillus sub... 94 1e-18
sp|O58967|YC16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE ... 94 2e-18
gb|AAD36198.1|AE001770_10 (AE001770) glycerol-3-phosphate A... 93 3e-18
emb|CAA61936| (X89810) putative integral protein [Bacillus ... 92 4e-18
emb|CAB59590.1| (AL132662) putative sugar transporter inner... 92 5e-18
gb|AAD35894.1|AE001748_10 (AE001748) sugar ABC transporter,... 92 7e-18
gb|AAD35505.1|AE001721_4 (AE001721) sugar ABC transporter, ... 92 7e-18
emb|CAB61179.1| (AL132973) putative binding protein depende... 91 1e-17
gi|2293306 (AF008220) sugar transporter [Bacillus subtilis]... 91 1e-17
gb|AAD33666.1|AF135398_3 (AF135398) putative integral membr... 90 2e-17
gi|1255237 (U50952) XynB [Thermoanaerobacterium thermosulfu... 90 3e-17
sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION ... 89 4e-17
emb|CAB72404.1| (AL138978) putative integral membrane trans... 89 5e-17
emb|CAB55716.1| (AL117387) putative binding-protein-depende... 89 6e-17
dbj|BAA28361| (D85027) integral membrane protein [Thermus s... 89 6e-17
sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROT... 88 1e-16
emb|CAB55534.1| (AL117322) putative binding-protein-depende... 87 2e-16
gb|AAD12048.1| (AF045609) AglG [Sinorhizobium meliloti] 86 3e-16
dbj|BAA82142.1| (AB024743) ORF2 [Clostridium stercorarium] 86 4e-16
emb|CAB61806.1| (AL133236) putative sugar-permease [Strepto... 85 5e-16
emb|CAA15784| (AL009199) probable transmembrane transport p... 85 7e-16
emb|CAB41202.1| (AL049661) putative binding protein depende... 85 9e-16
gb|AAD35683.1|AE001734_10 (AE001734) sugar ABC transporter,... 84 2e-15
sp|P10906|UGPE_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYST... 83 3e-15
emb|CAB49113.1| (AJ248283) TRANSMEMBRANE SUGAR TRANSPORT PR... 82 5e-15
sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS ... 82 5e-15
emb|CAB46401.1| (AL096743) putative integral membrane sugar... 81 1e-14
gi|3322335 (AE001192) sugar ABC transporter, permease prote... 81 1e-14
sp|P53561|YTCP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROT... 80 2e-14
dbj|BAA10819| (D64006) membrane bound sugar transport prote... 80 2e-14
sp|P39129|LPLC_BACSU LPLC PROTEIN >gi|450566 (L19164) trans... 80 2e-14
emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus] 80 3e-14
emb|CAB02073| (Z79702) uspE [Mycobacterium tuberculosis] 77 2e-13
gi|2293416 (AF007800) MtlG [Pseudomonas fluorescens] 76 5e-13
sp|P29824|LACG_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROT... 75 1e-12
emb|CAA47163| (X66596) lacG [Agrobacterium radiobacter] 75 1e-12
sp|Q00751|MSMG_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTE... 74 2e-12
sp|P47435|Y189_MYCGE PROBABLE ABC TRANSPORTER PERMEASE PROT... 73 2e-12
pir||I64220 membrane protein homolog - Mycoplasma genitaliu... 73 2e-12
dbj|BAA29273.1| (AP000001) 289aa long hypothetical maltose ... 73 4e-12
sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5... 72 5e-12
gi|2645414 (AF005383) putative transport protein [Caldicell... 71 9e-12
emb|CAB52982.1| (AL109950) putative integral membrane perme... 71 1e-11
emb|CAB46344.1| (AJ009797) CEBG protein [Streptomyces retic... 71 1e-11
sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROT... 70 2e-11
dbj|BAA81264.1| (AP000064) 303aa long hypothetical maltose ... 69 3e-11
emb|CAA21406| (AL031866) ORF81, len=275 aa, highly similar ... 69 3e-11
emb|CAA11785.1| (AJ223998) PCZA361.28 [Amycolatopsis orient... 69 4e-11
gi|1277032 (U51868) unknown [Bacillus subtilis] 68 8e-11
emb|CAB56685.1| (AL121596) putative binding-protein depende... 68 1e-10
gb|AAD36916.1|AE001822_9 (AE001822) sugar ABC transporter, ... 67 2e-10
pir||B27626 hypothetical protein 1 - Streptococcus mutans (... 67 2e-10
sp|P75262|Y189_MYCPN PROBABLE ABC TRANSPORTER PERMEASE PROT... 63 3e-09
dbj|BAA28360| (D85027) integral membrane protein [Thermus s... 61 1e-08
gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira... 61 1e-08
gi|3128352 (AF010496) transmembrane maltose transport prote... 61 2e-08
gi|2338761 (AF018073) sorbitol/mannitol transport inner mem... 61 2e-08
emb|CAA91218| (Z56279) integral membrane protein [Thermoana... 61 2e-08
gb|AAD33665.1|AF135398_2 (AF135398) putative integral membr... 58 1e-07
emb|CAB55649.1| (AL117385) putative sugar ABC-transporter i... 57 1e-07
dbj|BAA29091.1| (AP000001) 277aa long hypothetical sugar tr... 57 3e-07
emb|CAB48948.1| (AJ248283) SUGAR ABC TRANSPORTER, PERMEASE ... 55 6e-07
gb|AAC98127.1| (AF098273) integral membrane protein [Bacill... 55 1e-06
emb|CAB01403| (Z77855) sugar-binding transport protein [Ana... 53 3e-06
gi|3941371 (AF043654) BxlG [Streptomyces lividans] 52 6e-06
gi|2648949 (AE000991) spermidine/putrescine ABC transporter... 52 6e-06
gb|AAD36308.1|AE001779_10 (AE001779) sugar ABC transporter,... 50 2e-05
gb|AAF11009.1|AE001988_5 (AE001988) ABC transporter, permea... 50 2e-05
gb|AAD36278.1|AE001777_4 (AE001777) maltose ABC transporter... 48 1e-04
emb|CAA63862| (X94148) putative inner membrane protein [Bac... 48 1e-04
gi|3212179 (U32698) H. influenzae predicted coding region H... 46 3e-04
emb|CAA15783| (AL009199) probable transmembrane transport p... 46 3e-04
pir||H64049 nitrogenase C (nifC) homolog - Haemophilus infl... 46 3e-04
sp|P77156|YDCU_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE ... 46 5e-04
emb|CAB54176.1| (AL110470) putative binding protein depende... 45 6e-04
emb|CAA19795| (AL031013) putative transmembrane sugar trans... 45 8e-04
emb|CAB65653.1| (AJ252161) putative maltose transport membrane protein
[Alicyclobacillus acidocaldarius]
Length = 301
Score = 167 bits (418), Expect = 1e-40
Identities = 91/256 (35%), Positives = 147/256 (56%), Gaps = 8/256 (3%)
Query: 31 IWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANT 90
+W ++ + +N+ SLFP N +L NY +F Q+ W+ N+ ++ V+ A+A +
Sbjct: 53 MWFVVIASFNPSNSYISFSLFPSNASLANYKALFQGGQF--WTWVRNSLVVGVVVAMAQS 110
Query: 91 FITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM-ALVY 149
FIT + ++A S+LRF RK L L Y+ L +NM+++ G LV
Sbjct: 111 FITAMSAFAFSKLRFYGRKYGLMTLLLLQMFPNILAIAAFYTALAKLNMIDMLGSYILVM 170
Query: 150 VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGP 209
+G S ++ KG++D++P+ +DEAA IDGAT WQ FIH+TLPLS PM+V + +G
Sbjct: 171 LGTSAFNIWLLKGYMDSVPKELDEAAVIDGATTWQRFIHVTLPLSTPMMVVIFFLTLVGI 230
Query: 210 WLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIV 269
+ ++MF+ IL P T+ G+ N+++ G A N +F A ++L AVP+ I+F V
Sbjct: 231 FSEYMFAGTIL--QSPWNYTLGVGMYNLIS---GQFAKNWGEFAAAALLSAVPLAIVFAV 285
Query: 270 MQKFYVNGITAGADKG 285
Q++ G+ AG+ KG
Sbjct: 286 AQRYLTKGLVAGSVKG 301
pir||S63616 malG protein homolog cymG - Klebsiella oxytoca
>gi|854234|emb|CAA60006| (X86014) cymG [Klebsiella
oxytoca]
Length = 277
Score = 167 bits (418), Expect = 1e-40
Identities = 101/262 (38%), Positives = 150/262 (56%), Gaps = 18/262 (6%)
Query: 29 PVIWMILTSFAKNNN---TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
PVIW +++S NN +GF + F TLE+Y + + PY W NTFILA
Sbjct: 27 PVIWTVMSSLKPGNNLFSSGFTEISF----TLEHYHNLLTGT--PYLKWYKNTFILATCN 80
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-G 144
+ + + TI ++ SR RFK +K L L Y +L +N+++ + G
Sbjct: 81 MLISLVVVTITAFIFSRYRFKAKKKILMSILVLQMFPAFLSMTAIYILLSKMNLIDTYIG 140
Query: 145 MALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ LVYV GS L F ++ KG+ D IP S+DEAA IDGA F I LPL++P++V+ +
Sbjct: 141 LLLVYVTGS-LPFMTWLVKGYFDAIPTSLDEAAKIDGAGHLTIFFEIILPLAKPILVFVA 199
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
L++F GPW+DF+ + IL D T+A G+ + +++ +SA N F AG++L+AVP
Sbjct: 200 LVSFTGPWMDFILPTLILRSEDK--MTLAIGIFSWISS---NSAENFTLFAAGALLVAVP 254
Query: 263 ITILFIVMQKFYVNGITAGADK 284
IT+LFIV QK G+ +GA K
Sbjct: 255 ITLLFIVTQKHITTGLVSGAVK 276
emb|CAB08007| (Z94043) hypothetical protein [Bacillus subtilis]
>gi|2635927|emb|CAB15419| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 283
Score = 158 bits (396), Expect = 5e-38
Identities = 92/284 (32%), Positives = 152/284 (53%), Gaps = 9/284 (3%)
Query: 5 KTQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIF 64
K +R + L F Y ++P++W SF N+ S+ P++ T ++Y +F
Sbjct: 6 KVRRYIRLLFSYLLLAFMAVIIVYPLLWTAGASFNPGNSL-ISTSIIPKHPTFDHYKELF 64
Query: 65 NNSQ-YPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXX 123
+ Y W +N+ +++ + T +YA SR RFK RK L L
Sbjct: 65 AGKESLQYVQWYVNSMKISLFTMAGSLLCVTFTAYAFSRFRFKGRKYALTLFLLLQMIPQ 124
Query: 124 XXXXXXXYSILKSINMLNI-WGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGAT 181
+ + + + M+N W + L+Y+GG + Y+ KG++D+IP +DE+A IDGA+
Sbjct: 125 FSALIALFVLAQILGMINSHWLLILLYIGGLIPMNTYLMKGYMDSIPMDLDESAKIDGAS 184
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNS 241
+ F I LPLS+PM ++ F GP DF+ SS IL P+ T+ GL N++ +
Sbjct: 185 STRIFFQIILPLSKPMAAVVAMNGFTGPLGDFVLSSTIL--RTPESYTLPVGLFNLVNDV 242
Query: 242 KGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
G+S T F AG++LI++P+ ++FI++QK +V+G+TAG KG
Sbjct: 243 MGASYTT---FAAGALLISIPVAVIFIMLQKNFVSGLTAGGTKG 283
emb|CAB08038| (Z94043) hypothetical protein [Bacillus subtilis]
>gi|2635972|emb|CAB15464| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 278
Score = 155 bits (388), Expect = 4e-37
Identities = 93/282 (32%), Positives = 148/282 (51%), Gaps = 10/282 (3%)
Query: 6 TQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFN 65
T R L+ Y I+P++ ++F N+ F Q F +WTL+++ +F+
Sbjct: 5 TARMLNKICTYLFLTLLSIVIIYPLLITASSAFRVGNSAAF-QLDFSGSWTLDHFKRLFD 63
Query: 66 NSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXX 125
+ Y +W NT ++A+ V I T+ Y+ SR RF RK L F L
Sbjct: 64 ETLY--LNWYSNTLVIALSVMVLQVTIVTLAGYSYSRYRFAGRKKSLIFFLIIQMVPTMA 121
Query: 126 XXXXXYSILKSINMLN-IWGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRW 183
Y + I L+ W + +Y+GG + ++ KG+ DT+PR IDEAA IDGA
Sbjct: 122 ALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNTWLMKGYFDTVPREIDEAARIDGAGHL 181
Query: 184 QTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKG 243
+ F I LPL +PM+ +L AF+ P+ D++ + ++L P+ T+A GLQ+ ++N +
Sbjct: 182 RIFASIVLPLVKPMLAVQALWAFMAPFGDYLLTKFLL--RSPERLTIAVGLQSFISNPQQ 239
Query: 244 SSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
F AG++L A+PI +LF +QK +V+G+TAG KG
Sbjct: 240 QKVA---LFAAGAILAALPICVLFFFLQKNFVSGLTAGGTKG 278
sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALD
>gi|479208|pir||S32571 malD protein - Streptococcus
pneumoniae >gi|153725 (L08611) MalD [Streptococcus
pneumoniae]
Length = 277
Score = 148 bits (369), Expect = 7e-35
Identities = 98/288 (34%), Positives = 152/288 (52%), Gaps = 23/288 (7%)
Query: 6 TQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGI-F 64
TQR+L+ ++ Y I+P++ I+++F N + F L+ I + F
Sbjct: 5 TQRRLTQSY-YLYLIGLSIVIIYPLLITIMSAFKAGNVSAF---------KLDTNIDLNF 54
Query: 65 NNSQYPYAH-----WLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXX 119
+N + P NT I+A+I T I + YA SR F RK L F L
Sbjct: 55 DNFKGPSLKPCTVLGTFNTLIIALITMAVQTSIIVLAGYAYSRYNFLARKQSLVFFLIIQ 114
Query: 120 XXXXXXXXXXXYSILKSINMLNI-WGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATI 177
+ + +N LN W + +YVGG + ++ KG+ DT+P S+DE+A +
Sbjct: 115 MVPTMAALTAFFVMALMLNALNHNWFLIFLYVGGGIPMNAWLMKGYFDTVPMSLDESAKL 174
Query: 178 DGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNM 237
DGA ++ F I LPL RPM+ +L AF+GP+ D++ SS++L + + TVA GLQ
Sbjct: 175 DGAGHFRRFWQIVLPLVRPMVAVQALWAFMGPFGDYILSSFLL--REKEYFTVAVGLQTF 232
Query: 238 MTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
+ N+K + F AG++LIA+PI ILF +QK +V+G+T+G DKG
Sbjct: 233 VNNAKN---LKIAYFSAGAILIALPICILFFFLQKNFVSGLTSGGDKG 277
gb|AAD36899.1|AE001820_8 (AE001820) maltose ABC transporter, permease protein [Thermotoga
maritima]
Length = 833
Score = 125 bits (310), Expect = 6e-28
Identities = 75/226 (33%), Positives = 120/226 (52%), Gaps = 12/226 (5%)
Query: 67 SQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXX 126
+++ + W++N+ I+A + ++ T + + +Y SR+RF R+ + L
Sbjct: 613 TKHYFLRWVMNSVIVAGLVSLITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPAIMY 672
Query: 127 XXXXYSILKSINML-------NIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDG 179
Y +LK I ++ G+ Y+G Y+ KGF DTIP S++EAA IDG
Sbjct: 673 MVAIYGLLKLIGQFLPFLGLDSLGGLIFAYLGNIAYNMYLIKGFYDTIPSSLEEAAMIDG 732
Query: 180 ATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMT 239
ATR+QTF I +PL+ P++ ++ FIG + +F+ + IL D K T A GL T
Sbjct: 733 ATRFQTFYKIVVPLALPILTVIVILTFIGTFNEFVLARIIL--QDVKNYTYALGL---WT 787
Query: 240 NSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
S G+ T F A ++L P+ ILF+ +QK+ V G+T G+ KG
Sbjct: 788 FSTGAYETEWGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVKG 833
sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURM
>gi|2635755|emb|CAB15248| (Z99120) similar to sugar
permease [Bacillus subtilis]
Length = 300
Score = 124 bits (309), Expect = 8e-28
Identities = 78/261 (29%), Positives = 134/261 (50%), Gaps = 13/261 (4%)
Query: 28 FPVIWMILTSFAKNNNTGFVQSL-FPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+P++WM++++F KN++ F S P +W EN++ +N Y +N+ I+ +
Sbjct: 50 YPLLWMVMSAF-KNSDDIFEHSWSLPSSWHPENFVSAWNQGISSY---FMNSVIVTALTC 105
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI-WGM 145
V FI+ +Y LSR FK + FL L YSI++S+ + N W +
Sbjct: 106 VITVFISAWAAYGLSRFEFKGKGFFLVLCLGGLMLTPQVSLVPLYSIIQSLGLYNTYWAL 165
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
L Y + + + +I + ++EAA +DG T + F I LP+S P++V + ++
Sbjct: 166 ILPYAAYRIPFTIILIRSYFLSISKELEEAAYLDGCTSFGVFFRIFLPMSVPILVTSGIL 225
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
W +FMF+ I+ D +RT+ GL + + T+ +AG + A PI
Sbjct: 226 TAYHTWNEFMFA--IIFIDDENLRTIPAGLMQF----RDALQTDWGVLLAGLTISAAPII 279
Query: 265 ILFIVMQKFYVNGITAGADKG 285
ILF++MQK++V GI +G+ KG
Sbjct: 280 ILFLLMQKYFVRGIASGSVKG 300
gi|2828822 (AF012836) inner membrane protein MalG [Thermococcus litoralis]
Length = 278
Score = 124 bits (308), Expect = 1e-27
Identities = 80/261 (30%), Positives = 136/261 (51%), Gaps = 8/261 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+FP IWMI+ SFA++ T L TLENY+ + ++ + +L N+ I+A +
Sbjct: 23 LFPFIWMIVVSFAEDP-TFLGSPLVEYKSTLENYVRVLSDPTLHFPAYLKNSIIIASLVT 81
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-GM 145
+ I+++ +YA+SR+ FK R F L + ++ + +N + +
Sbjct: 82 LTTVSISSLAAYAVSRIEFKGRLLIPIFVLGLSMFPQISLVGYLFKFIEKLGWVNTYQAL 141
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
YV + L ++ + +P+ +DEAA IDGA+R +T I LPLS P + T+L+
Sbjct: 142 YFPYVAWTLPLSLWILLSYFSQLPKDLDEAAMIDGASRIKTLTTIILPLSAPALFSTALL 201
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
FI + +FMF+ +L D + RTV G+ + G +A SV+ +P+
Sbjct: 202 VFIAAFNEFMFA--LLFTTDHRARTVPVGIA-LFQGVHGEIPWG--SVMAASVISTIPLV 256
Query: 265 ILFIVMQKFYVNGITAGADKG 285
I+ ++ QK+ V+G+TAGA KG
Sbjct: 257 IMALLFQKYIVSGLTAGALKG 277
emb|CAA08866.1| (AJ009832) putative transmembrane sugar transport protein
[Thermotoga neapolitana]
Length = 498
Score = 123 bits (307), Expect = 1e-27
Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 67 SQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXX 126
+++ + W+ N+ I+A + ++ T + + +Y SR+RF R+ + L
Sbjct: 278 TRHYFLRWVANSVIVAGLVSIITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPAIMY 337
Query: 127 XXXXYSILKSINML-------NIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDG 179
Y +LK I ++ G+ Y+G Y+ KGF DTIP S++EAA IDG
Sbjct: 338 MVAIYGLLKLIGQFLPFLGLDSLGGLIFAYLGNIAYNMYLIKGFYDTIPSSLEEAAMIDG 397
Query: 180 ATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMT 239
ATR+QTF I +PL+ P++ ++ FIG + +F+ + IL D K T A GL T
Sbjct: 398 ATRFQTFYKIVVPLALPILSVIVILTFIGTFNEFVLARIIL--QDVKNYTYALGL---WT 452
Query: 240 NSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
S G+ T F A ++L P+ ILF+ +QK+ V G+T G+ KG
Sbjct: 453 FSTGAYETEWGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVKG 498
gb|AAF10143.1|AE001914_5 (AE001914) maltose ABC transporter, permease protein [Deinococcus
radiodurans]
Length = 458
Score = 122 bits (304), Expect = 3e-27
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 9/231 (3%)
Query: 56 TLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFA 115
T + G N S++ + + NT ++ + + ++T YA++RLRF R L F
Sbjct: 234 TPAQFQGATNESKFLLS--VRNTLFVSTVTGLLAILLSTTAGYAMARLRFPGRFQMLLFF 291
Query: 116 LXXXXXXXXXXXXXXYSILKSINMLNIW-GMALVYVGGS-GLGFYVFKGFLDTIPRSIDE 173
+ Y++L ++ ++N + G+ L Y GG+ +++KG+++++P S++E
Sbjct: 292 IFIQMFPVFLALVAIYTLLSALGLVNTFTGLILAYSGGAIAFNTWIYKGYVESLPESLEE 351
Query: 174 AATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYG 233
AA +DGATRWQTF + LPLS M+V+ L FIG + +F+ +S +L G + TV
Sbjct: 352 AAMVDGATRWQTFRRVVLPLSGSMLVFIFLNQFIGTYAEFILASVLLTGVEQ--WTVGVM 409
Query: 234 LQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
L++ + G +T F A + L A+PI LF Q ++V G TAG K
Sbjct: 410 LRSF---TSGQFSTKWGVFAAAATLGALPIVALFYSFQNYFVGGATAGGVK 457
sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJP
>gi|1742150|dbj|BAA14888| (D90769) Maltose transport
system permease protein MalG. [Escherichia coli]
>gi|1742158|dbj|BAA14895| (D90770) Maltose transport
system permease protein MalG. [Escherichia coli]
>gi|1787571 (AE000229) putative transport system
permease protein [Escherichia coli]
Length = 280
Score = 120 bits (299), Expect = 1e-26
Identities = 79/266 (29%), Positives = 134/266 (49%), Gaps = 17/266 (6%)
Query: 27 IFPVIWMILTSF-AKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+FP M++TSF +L PQ WTLE+Y+ IFN +P+ + N+ +++V+
Sbjct: 25 LFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVS 84
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWG- 144
+V F+ + +YALSRLRFK R + + K I L I+
Sbjct: 85 SVVAVFLGILGAYALSRLRFKGR---MTINASFYTVYMFSGILLVVPLFKIITALGIYDT 141
Query: 145 -MALVYVGGS---GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVY 200
MAL+ + ++ K + DTIP I+EAA +DG R Q IT+PL+ ++
Sbjct: 142 EMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLIS 201
Query: 201 TSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLY-QFIAGSVLI 259
+ F+ W D++F+S L T+ GL N+ S+ ++ + +A S++
Sbjct: 202 VFVYCFMVAWNDYLFASIFLSSASN--FTLPVGL-----NALFSTPDYIWGRMMAASLVT 254
Query: 260 AVPITILFIVMQKFYVNGITAGADKG 285
A+P+ I++ + ++F +G+TAG KG
Sbjct: 255 ALPVVIMYALSERFIKSGLTAGGVKG 280
sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|280124|pir||A60175 maltose transport inner membrane
protein malG - Salmonella typhimurium
>gi|47775|emb|CAA38191| (X54292) malG [Salmonella
typhimurium] >gi|154172 (M33921) inner membrane protein
(malG) [Salmonella typhimurium]
Length = 296
Score = 116 bits (288), Expect = 2e-25
Identities = 86/297 (28%), Positives = 140/297 (46%), Gaps = 28/297 (9%)
Query: 8 RKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNN-NTGFVQSLFP-----QNWTL---- 57
+KL L + +FP++ +I S + N TG SL P ++W L
Sbjct: 9 QKLRLLITHLGLLIFIAAIMFPLLMVIAISLREGNFATG---SLIPDKISWEHWRLALGF 65
Query: 58 --ENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFA 115
E+ G +P WL N+ +A I A+ ++T +YA +R+RF + L+
Sbjct: 66 SVEHADGRVTPPPFPVLLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGM 125
Query: 116 LXXXXXXXXXXXXXXYSI-------LKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIP 168
L Y++ + I + G+ Y+GG L + KG+ +TI
Sbjct: 126 LIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETID 185
Query: 169 RSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIR 228
S++EAA +DGAT WQ F + LPLS P++ +++FI + +S +L D
Sbjct: 186 SSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLL--RDVDSY 243
Query: 229 TVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
T+A G+Q + F A +VL A+PIT++F++ Q++ VNG+TAG KG
Sbjct: 244 TLAVGMQQYLNPQNYLWG----DFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
gb|AAD36277.1|AE001777_3 (AE001777) maltose ABC transporter, permease protein [Thermotoga
maritima]
Length = 823
Score = 116 bits (287), Expect = 3e-25
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 74 WLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI 133
W+LN+ I+++I A T + I +Y SR+RF R+ + L Y +
Sbjct: 610 WVLNSVIVSLIVAFITTTVCAIAAYPFSRMRFFGRRYGIMALLLIQMFPGVIFMIAIYDL 669
Query: 134 LKS-------INMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTF 186
L I + + G+ Y+ Y+ KGF DTIP S++EAA +DGATR+Q+F
Sbjct: 670 LNFMGKYIPFIGIDTLGGLIFAYLTNIAYNMYLIKGFYDTIPTSLEEAAIVDGATRFQSF 729
Query: 187 IHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSA 246
I +PL+RP++ L+ FIG + +++ + IL + + T A GLQ T G
Sbjct: 730 YKIIIPLARPILTVVFLLVFIGTFNEYVVARIIL--QNVRHYTYALGLQAFAT---GPYE 784
Query: 247 TNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
T F A ++L P+ ILF+ +Q++ V+G+T GA K
Sbjct: 785 TEWGLFTAAALLGMTPMVILFLSLQRYLVSGLTRGAVK 822
sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|78247|pir||S05333 maltose transport inner membrane
protein malG - Enterobacter aerogenes
Length = 296
Score = 115 bits (284), Expect = 7e-25
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 28/278 (10%)
Query: 27 IFPVIWMILTSFAKNN-NTGFVQSLFP-----QNWTL------ENYIGIFNNSQYPYAHW 74
+FP++ +I S + N TG SL P ++W L E+ G +P W
Sbjct: 28 MFPLLMVIAISLREGNFATG---SLIPDTISWEHWRLALGFSVEHADGRVTPPPFPVLLW 84
Query: 75 LLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI- 133
L N+ +A I A+ ++T +YA +R+RF + L+ L Y++
Sbjct: 85 LWNSIKVAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALF 144
Query: 134 ------LKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFI 187
L + + G+ Y+GG L + KG+ +TI S++EAA +DGAT WQ F
Sbjct: 145 DRLGQYLPFVGLNTHGGVIFAYMGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFR 204
Query: 188 HITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSAT 247
+ +PLS P++ +++FI + +S +L D T+A G+Q +
Sbjct: 205 LVLVPLSVPILAVVFILSFIAAITEVPVASLLL--RDVNSYTLAVGMQQYLNPQNYLWG- 261
Query: 248 NLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
F A +VL A+PIT++F++ Q++ VNG+TAG KG
Sbjct: 262 ---DFAAAAVLSAIPITVVFLLAQRWLVNGLTAGGVKG 296
sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|72516|pir||MMECMG maltose transport protein malG -
Escherichia coli >gi|41951|emb|CAA26628| (X02871) put.
mal G protein (aa 1-296) [Escherichia coli] >gi|396367
(U00006) maltose transport inner membrane protein
[Escherichia coli] >gi|1790464 (AE000476) part of
maltose permease, inner membrane [Escherichia coli]
Length = 296
Score = 114 bits (282), Expect = 1e-24
Identities = 82/278 (29%), Positives = 134/278 (47%), Gaps = 28/278 (10%)
Query: 27 IFPVIWMILTSFAKNN-NTGFVQSLFPQ-----NWTL------ENYIGIFNNSQYPYAHW 74
+FP++ ++ S + N TG SL P+ +W L E G +P W
Sbjct: 28 MFPLLMVVAISLRQGNFATG---SLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLW 84
Query: 75 LLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI- 133
L N+ +A I A+ ++T +YA +R+RF + L+ L Y++
Sbjct: 85 LWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALF 144
Query: 134 ------LKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFI 187
+ I + G+ Y+GG L + KG+ +TI S++EAA +DGAT WQ F
Sbjct: 145 DRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFR 204
Query: 188 HITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSAT 247
+ LPLS P++ +++FI + +S +L D T+A G+Q +
Sbjct: 205 LVLLPLSVPILAVVFILSFIAAITEVPVASLLL--RDVNSYTLAVGMQQYLNPQNYLWG- 261
Query: 248 NLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
F A +V+ A+PITI+F++ Q++ VNG+TAG KG
Sbjct: 262 ---DFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG 296
pir||A56641 probable membrane transport protein - Clostridium perfringens
>gi|296356|emb|CAA46887| (X66092) putative membrane
transport protein [Clostridium perfringens]
Length = 275
Score = 113 bits (280), Expect = 2e-24
Identities = 69/259 (26%), Positives = 123/259 (46%), Gaps = 9/259 (3%)
Query: 27 IFPVIWMILTSF-AKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
I P +WM+LTS T +FP ENY + + P+ + +NT I+ +
Sbjct: 24 IVPFLWMVLTSLKTMGEATQVPPKIFPSKPMYENYSEV--SRLLPFGKFYMNTIIMLIFR 81
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
V + F + + +YA +RL F +K F L + +++ + +LN
Sbjct: 82 VVGSVFFSAMAAYAFARLNFPGKKIFFALVLFQMMIPAQIFIVPQFLLVQKLGLLNTISA 141
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
++ S G ++ + F +P+ ++EAA +DG WQTF + LPL+R +V +
Sbjct: 142 LVIPGIVSAFGTFLLRQFFMGLPKELEEAAKLDGCNTWQTFYKVMLPLARSGLVALGIFT 201
Query: 206 FIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITI 265
+ + D M+ + D T++ GL ++ +G +TN Q +AGSVL P+ I
Sbjct: 202 ALFAFKDLMWPLVVNMSVDK--MTLSAGLASL----QGQFSTNYPQLMAGSVLAIWPMLI 255
Query: 266 LFIVMQKFYVNGITAGADK 284
+F++ Q+ ++ GI K
Sbjct: 256 IFVIFQRKFIEGIATSGSK 274
emb|CAB59597.1| (AL132662) probable sugar transport inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 299
Score = 112 bits (278), Expect = 3e-24
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 9/258 (3%)
Query: 29 PVIWMILTSFAKNNNTG-FVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAV 87
P++W++L+S N F +L+P L Y + N+ +P W +N+ I++ +
Sbjct: 50 PLVWLVLSSVMSNAEINRFPPALWPSGIDLGGYRYVLGNAMFP--RWFVNSLIVSAVTVA 107
Query: 88 ANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMAL 147
AN ++ YA +R+RF + + L + ++K + +++ G +
Sbjct: 108 ANLVFGSLAGYAFARMRFAGSRVLMGLMLATMAVPFQLTMIPTFLVMKKLGLIDTLGALI 167
Query: 148 VYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFI 207
V + ++ + F ++PR ++EAA IDG +R + I LPLSRP + +++ F+
Sbjct: 168 VPSLVTPFAVFLLRQFFLSLPRELEEAAWIDGCSRLRVLWRIVLPLSRPALATVAVLTFL 227
Query: 208 GPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILF 267
W D + + Y LQ +T +G T +AG+V+ +P+ + F
Sbjct: 228 TTWNDLTWPLIAIN------HDTQYTLQLGLTTFQGQHHTQWAAVMAGNVITVLPVLLAF 281
Query: 268 IVMQKFYVNGITAGADKG 285
+ QK ++ IT+ KG
Sbjct: 282 LGAQKTFIQSITSSGLKG 299
gb|AAF11008.1|AE001988_4 (AE001988) ABC transporter, permease protein, MalFG family
[Deinococcus radiodurans]
Length = 283
Score = 111 bits (276), Expect = 6e-24
Identities = 76/263 (28%), Positives = 131/263 (48%), Gaps = 11/263 (4%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLF-PQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+FP W I TS + L+ P + +L+N+ + N + LLN+ ++A
Sbjct: 28 LFPFYWAIKTSLTGSGELSREALLWWPTHPSLKNFTEVLTNGGF--LRNLLNSVVVATGT 85
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-G 144
+ + ++ + +YAL + RFK + + L Y+++K + N W G
Sbjct: 86 VLLSLLLSVLAAYALGKFRFKGKSVLMYIILAVSVFPQIAVLSGLYTMVKGFGLYNTWWG 145
Query: 145 MALVYVGGSGLGFYVFK--GFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ L Y+ + L F V+ F+ IP ++EAA +DGAT QT + LP+ P +V T
Sbjct: 146 LILSYMIFT-LPFTVWTLTSFVREIPTELEEAAYVDGATPMQTLFQVLLPVMTPALVTTG 204
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
L+AFI W +++F+ + D TV + N ++ + L +A SV++ VP
Sbjct: 205 LLAFINAWNEYLFA--LTFTSDNAASTVPVAIANFSGATQYETPFGL--TMAASVIVTVP 260
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
+ +L +V Q+ V+G+TAGA KG
Sbjct: 261 LLLLVLVFQRNIVSGLTAGAVKG 283
dbj|BAA29846| (AP000003) 279aa long hypothetical sugar transport system permease
protein [Pyrococcus horikoshii]
Length = 279
Score = 111 bits (274), Expect = 1e-23
Identities = 78/285 (27%), Positives = 132/285 (45%), Gaps = 10/285 (3%)
Query: 3 SYKTQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAK-NNNTGFVQSLFPQNWTLENYI 61
S KT +KL L Y ++ P I I+ SF + + + P +TLENY
Sbjct: 3 SEKTMKKLWLLLTYSVLIIFALVYLMPFIRSIVASFMEWAQASKYPPEWIPHPFTLENYR 62
Query: 62 GIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXX 121
+F +P W+LNT + A I N +++ YA +RL+F R L
Sbjct: 63 KLFRLELFP--RWILNTSLYAGITVTGNIIFSSMAGYAFARLKFPGRDVIFSSLLSLLMI 120
Query: 122 XXXXXXXXXYSILKSINML-NIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGA 180
Y I+ + ++ NI+G++L+ + S ++ + + ++P I EAA +DG
Sbjct: 121 PMFVTLVPNYIIIYKLGLVDNIFGLSLLSLV-SVSSIFLMRQYFTSLPNEIFEAARLDGC 179
Query: 181 TRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTN 240
++F +I LPL++P + ++ F+G W F+ L P+ T+ GL
Sbjct: 180 GPIKSFFYIALPLAKPALGAVAVYQFLGAWNAFIGPLIFL--RSPENFTLPVGLSFAFQR 237
Query: 241 SKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
S + T + IAGS++ A P +LF+ + K+ + GI KG
Sbjct: 238 SMWTEYTPI---IAGSIVAAAPTILLFVALNKYLIRGIVVTGGKG 279
dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris]
Length = 162
Score = 108 bits (266), Expect = 8e-23
Identities = 60/157 (38%), Positives = 96/157 (60%), Gaps = 7/157 (4%)
Query: 131 YSILKSINMLNIWGMALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIH 188
Y +L +++L+ L++ G+ + F ++ KG+ DTIP S+DEAA IDGA F
Sbjct: 11 YLLLNMLHLLDTHLGLLLFYAGTQIPFNTWLVKGYFDTIPHSLDEAARIDGAGHLTIFWK 70
Query: 189 ITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATN 248
+ LPL++P++ L F+GP DF+ IL P+ +T+A GL + + + T
Sbjct: 71 VILPLAKPILAVVFLFNFMGPMTDFLLPQIIL--TSPEHQTLAVGLFSFINDDFKKQYT- 127
Query: 249 LYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
F AGSVLIA+PIT++F+ +Q+ +++G+TAGA KG
Sbjct: 128 --LFAAGSVLIALPITVIFLSLQRCFISGLTAGASKG 162
gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium meliloti]
Length = 276
Score = 106 bits (262), Expect = 2e-22
Identities = 71/264 (26%), Positives = 127/264 (47%), Gaps = 15/264 (5%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+FP + ILTS K+ F +P + +L NY GIF++ + L N+ ++A +
Sbjct: 23 VFPFYYAILTSL-KSGTALFRIDYWPTDISLANYAGIFSHGTF--VRNLGNSLLVATLVV 79
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMA 146
+ + +YAL+R+RF+ R L L + +++ + + N +A
Sbjct: 80 AISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGLFELIRFVGIFNT-PLA 138
Query: 147 LVY---VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
L++ + +V F+ +P I+EAA +DGA+ W + +PL P +V T L
Sbjct: 139 LIFSYMIFTLPFTVWVLTTFMRDLPIEIEEAAIVDGASPWVVITRVFMPLMWPALVTTGL 198
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNL--YQFIAGSVLIAV 261
+AFI W +F+F+ + VA L + G S + +A SV++ V
Sbjct: 199 LAFIAAWNEFLFALTFTSSNTQRTVPVAIALLS------GGSQFEIPWGNIMAASVIVTV 252
Query: 262 PITILFIVMQKFYVNGITAGADKG 285
P+ +L ++ Q+ ++G+TAG KG
Sbjct: 253 PLVVLVLIFQRRIISGLTAGGVKG 276
emb|CAA68974| (Y07706) putative maltose permease [Streptomyces coelicolor]
Length = 302
Score = 104 bits (258), Expect = 7e-22
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+FPV W++ S + N T +NY + ++ + WL ++ I+++
Sbjct: 51 VFPVAWLVYLSLGPDKNDYLHPGRIWSKMTFDNYAFVLQDTNF--FDWLKSSLIVSLGTT 108
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINML-NIWGM 145
V + + SR+RF + + L Y IL + ++ N +G+
Sbjct: 109 VIGVLVAATTA-TRSRMRFPGYRKLMWVLLVTQMFPIAVLIVPMYQILSKLQLIDNYFGL 167
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
LVY + ++ KG+ DTIP IDEA +DG T + TF + LPL+RP +
Sbjct: 168 ILVYCSTAVPYCAWLLKGYFDTIPFEIDEAGRVDGLTPFGTFFRLILPLARPGLAVAGFY 227
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
+FI + + F+S + D K T A GLQ+ + S+ + NL A +VL+A+P++
Sbjct: 228 SFITAFGEVAFASTFM-LSDTKY-TFAVGLQSFV--SEHDAQRNL--MAATAVLVAIPVS 281
Query: 265 ILFIVMQKFYVNGITAGADKG 285
F ++QK V G+TAG KG
Sbjct: 282 AFFYLVQKNLVTGLTAGGTKG 302
emb|CAB46387.1| (AL096743) putative integral membrane transport protein
[Streptomyces coelicolor]
Length = 298
Score = 104 bits (256), Expect = 1e-21
Identities = 66/261 (25%), Positives = 123/261 (46%), Gaps = 14/261 (5%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+ P W++L + +T SL P T E++ ++ + + + N+ + +
Sbjct: 50 LIPFYWILLFALRPTGST----SLVPWPMTTEHFEKVWTDRGF--GTYFTNSVYVGLATL 103
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMA 146
V T + YAL+R F+ ++ F+ L + I + M+N G
Sbjct: 104 VMTTLVALAGGYALARFDFRIKRGFMLALLCSQFVPGALLLVPLFEIFAGLQMINSLGSV 163
Query: 147 LVY--VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
++ V L + F+ +P S++EAA +DG R++ F + LPL RP ++
Sbjct: 164 IIAETVFQLPLSIILISNFIKNVPYSLEEAAWVDGCGRFRAFRIVVLPLLRPGLIAVGSF 223
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
AF+ W F+F+ L + +T+ GL ++M+ + + +L AG ++ AVP+
Sbjct: 224 AFVHSWNHFLFALMFL--NNQSKQTIPVGLNSLMS----ADSVDLGALAAGGIVAAVPVV 277
Query: 265 ILFIVMQKFYVNGITAGADKG 285
I+F +QK+ + G +AGA KG
Sbjct: 278 IVFAFIQKWLITGFSAGAVKG 298
emb|CAA17253| (AL021899) hypothetical protein Rv2039c [Mycobacterium
tuberculosis]
Length = 280
Score = 104 bits (256), Expect = 1e-21
Identities = 65/253 (25%), Positives = 117/253 (45%), Gaps = 10/253 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+FP+IW + S K + +LFP + NY +F + P+ NT + A
Sbjct: 30 LFPIIWALSGSL-KADGEVTEPTLFPSHPQWSNYREVF--ALMPFWRMFFNTVLYAGCVT 86
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI-WGM 145
F ++ YA +RL+F+ R L +++ + ++ W M
Sbjct: 87 AGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQVILMRIVGWVDTPWAM 146
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
+ + GS G Y+ + F T+P ++EAA +DG + WQ + I LP SRP ++ ++
Sbjct: 147 IVPGLFGSAFGTYLMRQFFRTLPTDLEEAAILDGCSPWQIYWRILLPHSRPAVLVLGVLT 206
Query: 206 FIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITI 265
++ W DF++ ++ + T+ GL + +G +A S+L+ VP+ I
Sbjct: 207 WVNVWNDFLWPLLMIQRN--SLATLTLGLVRL----RGEYVARWPVLMAASMLMLVPLVI 260
Query: 266 LFIVMQKFYVNGI 278
L+ V Q+ +V GI
Sbjct: 261 LYAVAQRSFVRGI 273
emb|CAB07809| (Z93773) permease [Thermus sp. T2]
Length = 274
Score = 104 bits (256), Expect = 1e-21
Identities = 70/265 (26%), Positives = 128/265 (47%), Gaps = 15/265 (5%)
Query: 26 WIFPVIWMILTSFAKNNNT---GFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILA 82
W+ P+ +L SF ++ GF +P+ TL NY+ + + +LLN+FI+
Sbjct: 20 WLLPMAGALLVSFRTLDDLTLRGFWS--WPEEITLANYVRAWEEAGV--RRYLLNSFIIT 75
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI 142
+ V + ++ +YAL R RF++ P L + + + + +
Sbjct: 76 LPSLVGVLLLLSMAAYALVRFRFRWAFPLYLLFLAFNMVPFQMLMLPVFRLSNQLGVYDT 135
Query: 143 WGMALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVY 200
+ +++ LGF +V + F TIP S+ E+A IDGA W F I PL P I
Sbjct: 136 YWAPILFHTAFQLGFATFVLRNFARTIPPSLFESAVIDGAGEWTLFRRIAWPLMLPGIAA 195
Query: 201 TSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIA 260
+ + F + DF+++ +LG + ++ + GL N+ +G T+ +A S++
Sbjct: 196 VATLEFTWIFNDFLWALVLLGRDE--LKPITTGLANL----RGQYITDWPLIVAASLMAT 249
Query: 261 VPITILFIVMQKFYVNGITAGADKG 285
VP ++F +Q++++ G+T GA KG
Sbjct: 250 VPTLLVFFGLQRYFIQGLTLGATKG 274
emb|CAB72190.1| (AL138851) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 281
Score = 103 bits (255), Expect = 2e-21
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 28 FPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNN--SQYPYAHWLLNTFILAVIC 85
FP+ WM+L++F G ++S P+ WTL + F Q + + LN+ I+A
Sbjct: 29 FPLYWMVLSAFKP---AGEIESSEPRPWTLTPSLDSFRRVFEQQEFGRYFLNSLIVAGSV 85
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
+A+ I + + A++R RF+FR L L + +++ LN G
Sbjct: 86 VIASALIAFLAATAVTRFRFRFRTTLLIMFLVAQMVPVEALTIPLFFLMRDFGQLNTLGS 145
Query: 146 ALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
++ L F ++ +GF+ +P +++EAA IDGA+R + I PL P +V TS+
Sbjct: 146 LILPHIAFSLPFAIWMLRGFVKAVPEALEEAAYIDGASRTRFLWQILFPLVLPGLVATSV 205
Query: 204 MAFIGPWLDFMFS-SYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
+FI W DF+F+ S+I+ +A + + +A S ++ +P
Sbjct: 206 FSFISTWNDFLFAKSFIISDTSQSTLPMALLVFYKPDDPDWGGV------MAASTVMTIP 259
Query: 263 ITILFIVMQKFYVNGI 278
+ + F+++Q+ V+G+
Sbjct: 260 VLVFFVLVQRRLVSGL 275
emb|CAA15893| (AL021006) sugB [Mycobacterium tuberculosis]
Length = 274
Score = 103 bits (255), Expect = 2e-21
Identities = 70/261 (26%), Positives = 124/261 (46%), Gaps = 9/261 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+ PV+W+ S K +T L P T +NY GIF + A L+N+ + +I
Sbjct: 21 LLPVLWIFSLSL-KPTSTVKDGKLIPSTVTFDNYRGIFRGDLFSSA--LINSIGIGLITT 77
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-GM 145
V + + +YA++RL F ++ + AL ++I ++I + + W G+
Sbjct: 78 VIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAIGLFDTWPGL 137
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
L Y+ + L Y F IP +++AA +DGAT Q F + +PL+ P +V +++
Sbjct: 138 ILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPLAAPGLVTAAIL 197
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
FI W D + + + T + N +S+ T AG+++I +PI
Sbjct: 198 VFIFAWNDLLLALSLT--ATKAAITAPVAIANFTGSSQFEEPTG--SIAAGAIVITIPII 253
Query: 265 ILFIVMQKFYVNGITAGADKG 285
+ ++ Q+ V G+T+GA KG
Sbjct: 254 VFVLIFQRRIVAGLTSGAVKG 274
emb|CAB11327| (Z98604) possible transport protein [Mycobacterium leprae]
Length = 283
Score = 102 bits (252), Expect = 4e-21
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+FP++W + S K +L P + NY +F+ P+ NT + A
Sbjct: 33 LFPIVWALSGSLKKEGEIR-EPTLLPAHPQWSNYTEVFD--LIPFWRMFFNTVLYAGYVT 89
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI-WGM 145
V F ++ YA +RL+F+ R L + +++ + + W M
Sbjct: 90 VGQVFFCSLAGYAFARLQFRGRDALFVLYLGTLMMPLTVTIIPQFILMRVLGWTDTPWAM 149
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
+ + GS G Y+ + F T+P ++EAA +DG + WQ + + LP ++P + +++
Sbjct: 150 IVPGLFGSAFGTYLMRQFFRTLPSDLEEAAILDGCSPWQIYWRVLLPHAKPAVGVLAVLT 209
Query: 206 FIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITI 265
++ W DF++ ++ + T+ GL M +G T +A S+LI +P+ I
Sbjct: 210 WVNVWNDFLWPLLMIQRN--SLATLTLGLVRM----RGEYGTCWPVIMATSMLIILPLVI 263
Query: 266 LFIVMQKFYVNGIT 279
++ + Q+ +V GIT
Sbjct: 264 IYTIAQRAFVRGIT 277
emb|CAA19796| (AL031013) putative transmembrane sugar transport protein
[Streptomyces coelicolor]
Length = 279
Score = 102 bits (251), Expect = 5e-21
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+ PV M+ +S + P N T+ YI I+ S P A + +N+ I+A
Sbjct: 23 LLPVYVMVSSSLKPLEDVSSQFHWLPSNLTIRPYIDIW--STVPLAKYFVNSLIVAGAAT 80
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMA 146
V + I +YA+SR F+ ++ F L + I +N+ N G+A
Sbjct: 81 VCSVVIAVFAAYAVSRYEFRGKRVFSVTVLSTQMFPGILFLLPLFLIY--VNIGNATGIA 138
Query: 147 LVYV-GGSGLGFYVFK---------GFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRP 196
L GG L + F G+ D++PR +DEAA +DG + + +P + P
Sbjct: 139 LFGSRGGLILTYLTFSLPFSIWMLIGYFDSVPRDLDEAALVDGCGPLRALFKVVVPAAIP 198
Query: 197 MIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLY--QFIA 254
IV ++ AF+ W + +F+S + + RT+A GLQ T + ++Y Q +A
Sbjct: 199 GIVAVAVYAFMTAWGEVLFASVMT---NDATRTLAVGLQGYSTQN------DVYWNQIMA 249
Query: 255 GSVLIAVPITILFIVMQKFYVNGITAGADK 284
S++++VP+ F+++Q++ V G+TAGA K
Sbjct: 250 ASLVVSVPVVAGFLLLQRYLVAGLTAGAVK 279
gb|AAD35515.1|AE001721_14 (AE001721) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 271
Score = 101 bits (250), Expect = 6e-21
Identities = 63/277 (22%), Positives = 129/277 (45%), Gaps = 10/277 (3%)
Query: 10 LSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNT-GFVQSLFPQNWTLENYIGIFNNSQ 68
L+ T ++ ++ PV + +++SF + + ++FP+ +LE YI + +
Sbjct: 2 LTKTIKWIFIVFMLVVFMLPVFYAVVSSFKPMSEIYSYPPTIFPKKPSLEGYINVIK--E 59
Query: 69 YPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXX 128
Y +L NT +A + V ++ + Y L++ +F +P
Sbjct: 60 YDLLTYLRNTLFVATVATVITVLVSVMTGYGLAKGKFWGIRPVNSMFTMTMFVSAQVIMV 119
Query: 129 XXYSILKSINMLN-IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFI 187
+ +++S+ ++N +WG+ + V + G ++ ++ IP + E+A IDGA WQ F
Sbjct: 120 PLFVVIRSLGLINSLWGLIIPAVY-TPTGMFMAVQYMKDIPDELLESAKIDGANEWQIFW 178
Query: 188 HITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSAT 247
I PLS+P++ ++ +F W DF+ ++ + + T+ L + G+
Sbjct: 179 RIVFPLSKPLVAALAIFSFTWRWNDFVLPLLVVNRRN--LYTLQLALATIQEEYGGAEWN 236
Query: 248 NLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+ F S L +P I+F++ Q+ ++ GI AG K
Sbjct: 237 TILAF---STLTIIPTLIIFLLFQRLFMKGIMAGGLK 270
emb|CAB49103.1| (AJ248283) MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
[Pyrococcus abyssi]
Length = 412
Score = 99.8 bits (245), Expect = 2e-20
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 61 IGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXX 120
+G F NS + H L N+ ILA++ +YA SRL+F R+ L F L
Sbjct: 190 LGKFVNSVF--FHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQ 247
Query: 121 XXXXXXXX---XXYSILKSINMLN-IWGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAA 175
Y I+ + + N + +ALVY GS ++ K ++D+I DEAA
Sbjct: 248 VAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAA 307
Query: 176 TIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQ 235
IDGAT Q ++ LP++ P I ++M+FIG W +F+ +S +L + + Y L
Sbjct: 308 LIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLM 367
Query: 236 NMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+ + F A ++L A+P+ ++F++ QK+ +G+T G K
Sbjct: 368 GGI-----GRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
gb|AAD35367.1|AE001710_2 (AE001710) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 281
Score = 99.8 bits (245), Expect = 2e-20
Identities = 72/289 (24%), Positives = 137/289 (46%), Gaps = 28/289 (9%)
Query: 8 RKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQS--LFPQNWTLENYIG--- 62
+K+ RY ++FPV W+++T+F K ++ F FP TL N+ G
Sbjct: 3 KKILTIVRYILIAICLIFFLFPVYWLVITAF-KPSDEWFTMPPRFFPTKPTLANFFGAKE 61
Query: 63 --IFNNSQ------YPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFL-Q 113
+F + +PY L N+ ++ V A+ T I+ + +YA++R ++ PFL +
Sbjct: 62 TEVFGGTTGSIENIFPY---LRNSIVVGVSVALIGTVISALAAYAIAR--YRVGGPFLAE 116
Query: 114 FALXXXXXXXXXXXXXXYSILKSINMLNIWGMALV--YVGGSGLGFYVFKGFLDTIPRSI 171
+ + Y I + ++N W ++ V LG ++ F IPR I
Sbjct: 117 WIISIRMLPPIVSAVPLYVIFTKLRLINTWWALILSHLVIVVPLGVWLLISFFREIPREI 176
Query: 172 DEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVA 231
DEAA +DGAT +Q F ++ LPLS P + ++++ I W +F+ + + D + +T+
Sbjct: 177 DEAAYVDGATPFQAFFYVVLPLSAPGLAAVAVLSLIQSWGEFLLALVLT--NDARAQTLP 234
Query: 232 YGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITA 280
L +T + + A ++ +P+ + +V Q++ + G+T+
Sbjct: 235 IFLGRYITGWRVAWG----PLSAAGIVTMLPVVVFALVAQRYLIRGLTS 279
emb|CAB61916.1| (AL133278) putative transport system permease protein [Streptomyces
coelicolor A3(2)]
Length = 306
Score = 99.5 bits (244), Expect = 3e-20
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 10/280 (3%)
Query: 8 RKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQ--SLFPQNWTLENYIGIFN 65
R L RY I P +W + TS F P + TL NY + +
Sbjct: 35 RGWELVLRYLLLLGVLALTIGPFLWQLSTSLKGPTEDIFSSPPKFLPSDPTLHNYERVAD 94
Query: 66 NSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXX 125
P + LN+ +A V N + YAL+RLR++ R+ +
Sbjct: 95 T--IPVWDYALNSLKVAAANVVTNCVGAALAGYALARLRYRGRRVATLVFILAMLVPVEG 152
Query: 126 XXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQT 185
++ ++ + + N ++ S L + + +P I+EAA +DGA WQ
Sbjct: 153 IIIAQFTTMRELGLNNTLVGVVLPGCVSALNVLLMRNAFLNLPYEIEEAAFVDGANVWQR 212
Query: 186 FIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSS 245
F+ I LP + + ++ AF+G W DF++ +L DP T+ GL + G+
Sbjct: 213 FLRIALPAVKGTLAVVAIFAFMGAWDDFLWPLIVL--SDPSRFTLTIGLNYL----HGTF 266
Query: 246 ATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
A + AG+++ P+ +LF +Q+++ G+ GA KG
Sbjct: 267 ANDERLVAAGTIIAVAPLIVLFACLQRYFFRGVGEGAVKG 306
emb|CAB71835.1| (AL138662) putative sugar transport inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 294
Score = 99.1 bits (243), Expect = 4e-20
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 10/259 (3%)
Query: 29 PVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVA 88
P ++++LTS + + L+P W NY + + + W NT + A + V
Sbjct: 44 PFVFVVLTSLMSDQQA-LTRDLWPHTWEWGNYRAVLDTPGF--LTWWKNTLLYAGLGTVL 100
Query: 89 NTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI-LKSINMLN-IWGMA 146
+ ++YAL++ RF+ R L + Y K +++ +W +
Sbjct: 101 TVASSVPVAYALAKFRFRGRHLSLMLVISMMMLPPQVIIIPMYLFWAKQLDLSGTLWPLI 160
Query: 147 LVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAF 206
+ G ++ + FL TIP +AA +DG +T + + LP+++P I +L F
Sbjct: 161 VPMAFGDAFSIFLLRQFLLTIPDEYLDAAKVDGCGELRTLLRVVLPMAKPGIAAVALFQF 220
Query: 207 IGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITIL 266
W D+ F I +P T++YGL++ KG+ T+ +A +VL+ P+ ++
Sbjct: 221 FYAWNDY-FGPQIYASENPGAWTLSYGLESF----KGAHHTDWNLTMAATVLVMAPVILV 275
Query: 267 FIVMQKFYVNGITAGADKG 285
F QK +V G+T KG
Sbjct: 276 FFFAQKAFVEGVTLTGVKG 294
emb|CAB71198.1| (AL138538) putative sugar transport inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 99.1 bits (243), Expect = 4e-20
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 10/259 (3%)
Query: 29 PVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVA 88
P ++++LTS + + L+P W NY + + + W NT + A + V
Sbjct: 53 PFVFVVLTSLMSDQQA-LTRDLWPHTWEWGNYRAVLDTPGF--LTWWKNTLLYAGLGTVL 109
Query: 89 NTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI-LKSINMLN-IWGMA 146
+ ++YAL++ RF+ R L + Y K +++ +W +
Sbjct: 110 TVASSVPVAYALAKFRFRGRHLSLMLVISMMMLPPQVIIIPMYLFWAKQLDLSGTLWPLI 169
Query: 147 LVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAF 206
+ G ++ + FL TIP +AA +DG +T + + LP+++P I +L F
Sbjct: 170 VPMAFGDAFSIFLLRQFLLTIPDEYLDAAKVDGCGELRTLLRVVLPMAKPGIAAVALFQF 229
Query: 207 IGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITIL 266
W D+ F I +P T++YGL++ KG+ T+ +A +VL+ P+ ++
Sbjct: 230 FYAWNDY-FGPQIYASENPGAWTLSYGLESF----KGAHHTDWNLTMAATVLVMAPVILV 284
Query: 267 FIVMQKFYVNGITAGADKG 285
F QK +V G+T KG
Sbjct: 285 FFFAQKAFVEGVTLTGVKG 303
emb|CAB70939.1| (AL137778) putative transport system inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 99.1 bits (243), Expect = 4e-20
Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 8/262 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNN-SQYPYAHWLLNTFILAVIC 85
++PV+W+I SF ++ + LFP + +NY + + + + + +N+ LAV
Sbjct: 47 LYPVLWVIGGSFKESGDIVGSLDLFPGDPITDNYTSLADGIADISISTFFVNSLFLAVGS 106
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
+ ++ +YA +++RF R + Y + ++++M+N +
Sbjct: 107 VIGIVVSCSLTAYAFAKIRFAGRNLLFTLMIGTLLLPYHVLLIPQYVLFRNLDMINTYTP 166
Query: 146 ALV--YVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
L+ Y+ ++ F+ +PR +DEAA +DG + + I LPL RP ++ +++
Sbjct: 167 LLLGKYLATEAFFVFLMVQFMRNLPRELDEAARLDGCGHLRIYWSIVLPLCRPALITSAI 226
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPI 263
FI W DFM L +P T++ GL+ M + +G N IA S++ +P+
Sbjct: 227 FTFINSWNDFMGPLIYL--NEPGKYTISLGLK-MFVDQEG--LANYGGMIAMSLVALLPV 281
Query: 264 TILFIVMQKFYVNGITAGADKG 285
F+ Q++ ++G+ KG
Sbjct: 282 LAFFLAFQRYLIDGMATSGLKG 303
sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1036
>gi|3257451|dbj|BAA30134| (AP000004) 276aa long
hypothetical maltose transport inner membrane protein
[Pyrococcus horikoshii]
Length = 276
Score = 98.7 bits (242), Expect = 5e-20
Identities = 59/257 (22%), Positives = 119/257 (45%), Gaps = 11/257 (4%)
Query: 26 WIFPVIWMILTSFAKNNN--TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAV 83
W+ P + +++ S +G+ L P TL+NYI N+ +P L N+ I+A+
Sbjct: 20 WLIPFMGVLMASVRPYEEIVSGWWH-LHPFTITLKNYINALNHPMFPIGEGLKNSLIVAI 78
Query: 84 ICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW 143
+ + ++ +YA +R F + F + Y +L++ ++LN +
Sbjct: 79 PSTIVPVIVASLAAYAFARYSFPIKHYLFAFIVLLMALPQQMTVVPLYFLLRNAHLLNTF 138
Query: 144 GMALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYT 201
++ GL + +F + + +P ++EAA IDGAT +Q F I LP++ P ++
Sbjct: 139 RGLIIVHSAWGLAWIIFFMRNYFSMLPTDVEEAAKIDGATDFQIFYKIVLPMALPGLISA 198
Query: 202 SLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAV 261
S++ F W DF + L + + T L +G + A S+++ +
Sbjct: 199 SILQFTWVWSDFFLALVFLQNPEKYVATQRLPL------LRGQYFVDWGLLTAASIMVML 252
Query: 262 PITILFIVMQKFYVNGI 278
+++ + QK+Y++G+
Sbjct: 253 VPLLVYALFQKYYISGM 269
gi|1163114 (U43526) ORF-4 [Streptococcus pneumoniae]
Length = 277
Score = 97.9 bits (240), Expect = 9e-20
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 13/262 (4%)
Query: 27 IFPVIWMILTSF-AKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+FP++W+I++S K T + +P+ +TL+ + + N+ + + N+ I+A+
Sbjct: 25 VFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFTHVINDLHF--IDNIRNSLIIALAT 82
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSI-LKSINMLN-IW 143
+ I+ + +Y + R F + L YSI + + + N ++
Sbjct: 83 TLIAIIISAMAAYGIVRF-FPKLGAIMSRLLVITYIFPPILLAIPYSIAIAKVGLTNSLF 141
Query: 144 GMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
G+ +VY+ S ++ GF T+P I+EAA IDGA ++ TF + LP+ P IV T+
Sbjct: 142 GLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGANKFVTFYKVVLPIVAPGIVATA 201
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
+ FI W +F+++ ++ TVA L+++ GS + +A SV++ +P
Sbjct: 202 IYTFINAWNEFLYALILINNTGK--MTVAVALRSL----NGSEILDWGDMMAASVIVVLP 255
Query: 263 ITILFIVMQKFYVNGITAGADK 284
I F ++Q +G++ G+ K
Sbjct: 256 SIIFFSIIQNKIASGLSEGSVK 277
emb|CAB03652| (Z81331) ugpE [Mycobacterium tuberculosis]
Length = 275
Score = 97.5 bits (239), Expect = 1e-19
Identities = 62/259 (23%), Positives = 122/259 (46%), Gaps = 10/259 (3%)
Query: 29 PVIWMILTSFAKNNNTGFVQ--SLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
P++++ TSF K+ + Q S +P W +NY Q P+ +L N+ I+ + A
Sbjct: 25 PLLFVFFTSF-KDQPDIYAQPTSWWPLRWYPQNYRTA--TEQIPFWTFLRNSLIITSVLA 81
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMA 146
V + + ++ L +RF R + Y+++ + + N +
Sbjct: 82 VVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQITVISNYALISHLGLRNTFAGI 141
Query: 147 LVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAF 206
++ + G G ++ + ++P I EAA +DGA WQ + + LP+SRP +V ++
Sbjct: 142 ILPLAGVAFGTFLMRNHFLSLPAEIIEAARMDGARWWQLLLRVVLPMSRPTMVAVGVITV 201
Query: 207 IGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITIL 266
+ W ++++ L D + + GL + + TN +A ++L +PI ++
Sbjct: 202 VNEWNEYLWP--FLMSDDESVAPLPIGLTFL---QQAEGVTNWGPVMAVTLLAMLPILLV 256
Query: 267 FIVMQKFYVNGITAGADKG 285
FI +Q+ + G+T+GA KG
Sbjct: 257 FIALQRQMIKGLTSGAVKG 275
dbj|BAA78949.1| (AP000058) 302aa long hypothetical multiple sugar-binding transport
system permease protein [Aeropyrum pernix]
Length = 302
Score = 96.7 bits (237), Expect = 2e-19
Identities = 66/266 (24%), Positives = 123/266 (45%), Gaps = 14/266 (5%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQ---SLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILA 82
W+ P I + + S V+ ++ +T++NYI ++ Y + +N+ I+A
Sbjct: 45 WLLPFIGLFMVSVRPYGEV-IVKGWWNIVDATFTMDNYIKAWSYDPYSVSGGYINSLIVA 103
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI 142
+ V + +Y SR F + + + +LK++ ++N
Sbjct: 104 LPATVIPVAAASFAAYGFSRFSFPLKSYLFLVTILLMALPQQIVVVPLFLLLKNLGLINT 163
Query: 143 WGMALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVY 200
+ ++ G+ + +F K F D +PR ++EAA +DGA+ ++ F I LP+S P I+
Sbjct: 164 FPGIILVHSAWGMAWIIFFMKNFFDILPREVEEAARVDGASDFRIFYKIVLPMSLPGILS 223
Query: 201 TSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVL-I 259
S++ F W F F L DP + + NM KG+ + AGSV +
Sbjct: 224 ASVLQFTWVWSSFFFELIFL--IDPSKWVITQRIANM----KGTYLVDWGLIAAGSVFAM 277
Query: 260 AVPITILFIVMQKFYVNGITAGADKG 285
AVP+ + ++++Q++Y+ G A KG
Sbjct: 278 AVPLAV-YMLLQRYYIRGFVGWAAKG 302
dbj|BAA17913| (D90910) lactose transport system permease protein LacG
[Synechocystis sp.]
Length = 270
Score = 96.7 bits (237), Expect = 2e-19
Identities = 63/263 (23%), Positives = 123/263 (45%), Gaps = 14/263 (5%)
Query: 27 IFPVIWMILTSFAKNNNTGF--VQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVI 84
+ P++W++ T+ F + L P+ L N+I ++ + YP+ +L N+ +++ I
Sbjct: 18 LLPLLWLVATALKAPTEDVFGGLGQLLPRQPNLGNFIKVWQD--YPFGRYLFNSVVVSSI 75
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWG 144
N F + +Y L+RL F R L + Y + ++ + N +
Sbjct: 76 TVALNLFFCALAAYPLARLNFVGRDMTLAAIVATLMIPFQLIMIPLYILAVNLGLRNSYV 135
Query: 145 MALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
+ S G ++ + +P+ ++EA IDG + HI +P RP +V ++
Sbjct: 136 GIIFPSLASAFGIFLLRQAFQGVPKELEEAGRIDGCRELGIWWHIMIPAIRPALVTLAIF 195
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNL-YQFIAGSVLIAV-P 262
FIG W DF++ +L P+ T+ G+ + SSA + ++ IA + +IA+ P
Sbjct: 196 VFIGAWSDFLWPLIVL--DQPEYYTLPLGVAQL------SSALDFDWRLIAAASVIAIAP 247
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
I +LF+ +Q++ + + KG
Sbjct: 248 IIVLFLFVQRYIIPSEASSGVKG 270
emb|CAA20605.1| (AL031514) putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 293
Score = 96.0 bits (235), Expect = 4e-19
Identities = 65/284 (22%), Positives = 116/284 (39%), Gaps = 12/284 (4%)
Query: 5 KTQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLF--PQNW-TLENYI 61
+++ ++S Y + P++ + LTS Q P +W NY
Sbjct: 18 RSRPRISTALTYLSLVVASAVVLLPLLVVFLTSLKSYGEVSDGQGALAPPDDWLNFSNYA 77
Query: 62 GIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXX 121
F++ A NT + + I ++ +YA+ R F+ +K + L
Sbjct: 78 TAFSDGHLLQAFG--NTAFILLFSITGTVIIGSMTAYAIDRFDFRLKKLVMALFLIATLV 135
Query: 122 XXXXXXXXXYSILKSINMLNI-WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGA 180
+ ++ + N W L+Y+G + Y+F F+ IPRS+DEAA +DGA
Sbjct: 136 PAVTTQVATFQVVNGFGLFNTRWAPILLYMGTDIVAIYIFLQFIRGIPRSLDEAARLDGA 195
Query: 181 TRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTN 240
+ + I PL +P + ++ I + DF + D + A +
Sbjct: 196 NSFTIYRKIIFPLLKPAVATVVIIKGITTYNDFYIPFLYMPDEDLGTMSTA------LFR 249
Query: 241 SKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
KG + AG+VL+ VP ++F+ +Q++ NG GA K
Sbjct: 250 FKGPFGAHWENISAGAVLVIVPTLVIFLFLQRYIYNGFAQGATK 293
gi|2435437 (AF016588) putative integral membrane component of starch
degradation products transport [Pyrococcus furiosus]
Length = 265
Score = 96.0 bits (235), Expect = 4e-19
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 12/229 (5%)
Query: 61 IGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXX 120
IG F NS++ H L N+ ILA + +YA SRL+F R+ L F L
Sbjct: 43 IGKFVNSKF--FHHLRNSLILATLTVFLTLLFVVPAAYAFSRLKFFGREHILYFYLMFTQ 100
Query: 121 XXXXXXXX---XXYSILKSINMLN-IWGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAA 175
Y +L + + N + +A++Y GS ++ K ++D+I DEAA
Sbjct: 101 VAGGLGIAGLIALYGMLVKLGLYNKLPALAIIYAAGSVPFNTWLLKSYIDSISPDFDEAA 160
Query: 176 TIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQ 235
+DGA+ Q ++ LP++ P I ++M+FIG W +F+ +S +L + + Y L
Sbjct: 161 LVDGASYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLTEENQPLSVWIYTLM 220
Query: 236 NMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+ + F A ++L A+P+ I+F++ Q + +G+T G K
Sbjct: 221 GGI-----GRGIDWNYFAAAALLFALPVFIMFMLAQNYIRSGLTVGGLK 264
gi|3342712 (U22894) integral membrane protein [Streptomyces lividans]
Length = 291
Score = 95.2 bits (233), Expect = 6e-19
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 29 PVIWMILTSFAKNNNTGFVQS---LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
P+ WM+ + F VQ+ L P+++ +NY +N A L NT A
Sbjct: 39 PMYWMVSSGFKDTQEV--VQTPPTLVPESFQPDNYSQAWNVMDL--ASLLGNTLFYAFGA 94
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSI-----NML 140
+Y+LS+LR F K L L Y + + N+L
Sbjct: 95 LAFQLVFDVAAAYSLSKLRPVFGKAILGLMLATLMIPATVLVVPQYLTVLDVPIFERNLL 154
Query: 141 NI-WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIV 199
N W + L V + ++ K F D+IPR + +AA++DGA+ +T I LP+SRP++
Sbjct: 155 NTPWAIWLPSVTNA-FNIFLLKRFFDSIPRELLDAASMDGASPMRTLRSIVLPISRPILG 213
Query: 200 YTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLI 259
S+ A +G W DF++ L DP +T+ G+ ++ S+ + IA +
Sbjct: 214 VVSIFAIVGVWKDFLWPMLTL--PDPSKQTLNVGIYSL------SNGVPVNVLIAALTMA 265
Query: 260 AVPITILFIVMQKFYVNGITAGADKG 285
++P ++F++ Q+ ++G+TAG KG
Sbjct: 266 SLPTLVIFLIFQRNIMSGLTAGGLKG 291
gi|699148 (U15180) maltose transport inner membrane protein [Mycobacterium
leprae]
Length = 296
Score = 94.8 bits (232), Expect = 8e-19
Identities = 70/263 (26%), Positives = 121/263 (45%), Gaps = 13/263 (4%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
+ PV+W++ S K +T L P T +NY GIF + + A L+N+ + +
Sbjct: 43 LLPVLWILSLSL-KPASTVKDGKLIPSLVTFDNYRGIFRSDLFSSA--LINSIGIGLTTT 99
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-GM 145
V + +YA++RL F ++ + L ++I + + + + W G+
Sbjct: 100 VIAVMFGAMAAYAIARLAFPGKRLLVGTTLLVTMFPAISLVTPLFNIERRVGLFDTWAGL 159
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
L Y+ + L Y F IP +++AA +DGAT Q F + +PL+ P +V +++
Sbjct: 160 ILPYITFALPLAIYTLSAFFAEIPWDLEKAAKMDGATSGQAFRKVIVPLAAPGLVTAAIL 219
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATN--LYQFIAGSVLIAVP 262
FI W D + + + VA +TN GSS AG+++I P
Sbjct: 220 VFIFAWNDLLLALSLTSTKAAITAPVA------ITNFTGSSQFEEPTGSIAAGAIVITAP 273
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
I + + Q+ V G+T+GA KG
Sbjct: 274 IIVFVWIFQRRIVAGLTSGAVKG 296
gb|AAD36915.1|AE001822_8 (AE001822) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 273
Score = 94.4 bits (231), Expect = 1e-18
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 11/257 (4%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQY---PYAHWLLNTFILA 82
WI+P +W+ L+S FP TLE+Y IF ++ P+ N+ +
Sbjct: 21 WIYPYVWLFLSSIKPPEE--IFTRFFPSRITLEHYKYIFTMAEKMERPFLRAFFNSLFVT 78
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI 142
+ + F ++I++Y LS+LRFK F + + +++ + + N
Sbjct: 79 LTVTFSVVFTSSIIAYGLSKLRFKGSNAVFNFIIFQMLFPGFMFIIPLFVLIRKLGLYNT 138
Query: 143 WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ +V S ++ TIP+ EAA IDGA+ + +PLSR +
Sbjct: 139 YSAMIVPFLMSAWSLFMLTQSYKTIPQDYIEAAKIDGASTLWIIFRVMVPLSRSTLSIVG 198
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
L FIG W +F++ ++ + +V ++ A + +AGSV+ +P
Sbjct: 199 LFTFIGIWDNFLWPLMVVKDYNKMPLSV------LLATFNHEYAAYVGPLMAGSVIQTLP 252
Query: 263 ITILFIVMQKFYVNGIT 279
+ ++F++ +K ++ GI+
Sbjct: 253 MVLIFLIFRKQFLQGIS 269
emb|CAA99594.1| (Z75208) hypothetical protein [Bacillus subtilis]
>gi|2635338|emb|CAB14833| (Z99118) integral membrane
protein [Bacillus subtilis]
Length = 281
Score = 94.4 bits (231), Expect = 1e-18
Identities = 56/263 (21%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 26 WIFPVIWMILTSFAKNNN---TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILA 82
++FP+ ++L S ++ G + P+ + +NY +FN Y W N+ +L
Sbjct: 26 YLFPIFCLLLGSLKPSSELLRVGLNLDIDPKVMSFDNYTFLFNGGSI-YFKWFFNSLVLG 84
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI 142
+ V F ++++ Y L+ FK R L + + +++++
Sbjct: 85 LFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVPLEVMMLPLFKLTVGLHLIDS 144
Query: 143 WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ ++ + S + + F+ + +PR + ++A +DG T + F I PL +P
Sbjct: 145 YTGVILPLIASPVAVFFFRQYALGLPRDLLDSARMDGCTEFGIFFRIMAPLMKPAFGAMI 204
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
++ + W +F++ +L + + T+ GL ++++ N I+GSV +P
Sbjct: 205 ILQSLNSWNNFLWPLIVLRSKE--MFTLPIGLSSLLS----PYGNNYDMLISGSVFAILP 258
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
+ I+F+ QK++++G+T G KG
Sbjct: 259 VIIIFLFFQKYFISGLTVGGVKG 281
sp|O58967|YC16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1216
>gi|3257633|dbj|BAA30316| (AP000005) 275aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 275
Score = 93.6 bits (229), Expect = 2e-18
Identities = 70/267 (26%), Positives = 118/267 (43%), Gaps = 19/267 (7%)
Query: 26 WIFPVIWMILTSFAKNNN----TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFIL 81
W IW +T+ K T VQ +FP T + Y F + P +LN+ I
Sbjct: 21 WYLLPIWSAITTSTKTGEQVALTTPVQFVFPP--TFDPYREAFRELKRP----ILNSLIF 74
Query: 82 AVICAVANTFITTIMSYALSRL-RFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINML 140
+ +T + +I + +++L R + + L I+ S+ +
Sbjct: 75 TTFATIFSTILGSIAGFTIAKLVRGRVSRQLLALISFGIFLPYQSILIPLVKIISSLGLY 134
Query: 141 N-IWGMALVYVG-GSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMI 198
N I G+ L + G + +F + IP + EAA IDGA W+ + + LPLS+
Sbjct: 135 NRILGLILTHTAYGIPITTLLFTNYYYEIPDELVEAAKIDGADPWKIYTKVILPLSKAPF 194
Query: 199 VYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVL 258
V T + F W D++F + G + TV + N KGS N +AG+++
Sbjct: 195 VVTGIYQFTNIWNDYLFGVVLTRGEEAMPATV------KLANLKGSFVANWNIQMAGALI 248
Query: 259 IAVPITILFIVMQKFYVNGITAGADKG 285
+A+P ++ I + K+ + G T+GA KG
Sbjct: 249 VALPTLLIMIALGKYLIRGYTSGALKG 275
gb|AAD36198.1|AE001770_10 (AE001770) glycerol-3-phosphate ABC transporter, permease protein
[Thermotoga maritima]
Length = 276
Score = 92.8 bits (227), Expect = 3e-18
Identities = 70/283 (24%), Positives = 128/283 (44%), Gaps = 12/283 (4%)
Query: 7 QRKLSLTFRYXXXXXXXXXWI-FPVIWMILTSFAKNNNT-GFVQSLFPQNWTLENYIGIF 64
+RK S+T Y + P+ I SF K + FP ++ +NY+ F
Sbjct: 2 RRKRSITILYEIILVMVTFIMALPLFLAITISFQKPEAVFSYPPKFFPTSFYWKNYVEAF 61
Query: 65 NNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRK-PFLQFALXXXXXXX 123
P A LN+ I+A + + + +A S FK +K F
Sbjct: 62 K--YVPLARLFLNSLIVASLITLGKLTTGALAGFAFSHFNFKSKKIMFATLFATLFLPAE 119
Query: 124 XXXXXXXYSILKSINMLNI-WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATR 182
+ I+K+ +N W + + ++ + F + + FL TIPR + +AA IDGA+
Sbjct: 120 TVMILPLFLIMKTFGWVNTYWALTIPFMASATNTFLMRQHFL-TIPRELQDAALIDGASY 178
Query: 183 WQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSK 242
Q F + +PLS+ M+ S++ F+ W +++ ++ + K++TV G++ +M +
Sbjct: 179 MQFFWKVLIPLSKHMLAGASIINFVYAWNMYLWP--LIVSMEDKMKTVQVGVKMLM---Q 233
Query: 243 GSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
SA N +AG+V+ P ++F+ +Q +V + KG
Sbjct: 234 AESANNWGVIMAGTVVALAPTVVMFLALQNLFVKSLVRSGMKG 276
emb|CAA61936| (X89810) putative integral protein [Bacillus subtilis]
Length = 281
Score = 92.4 bits (226), Expect = 4e-18
Identities = 56/263 (21%), Positives = 121/263 (45%), Gaps = 10/263 (3%)
Query: 26 WIFPVIWMILTSFAKNNN---TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILA 82
++FP+ ++L S ++ G + P+ + +NY +FN Y W N+ +L
Sbjct: 26 YLFPIFCLLLGSLKPSSELLRVGLNLDIDPKVMSFDNYTFLFNGGSI-YFKWFFNSLVLG 84
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNI 142
+ V F ++++ Y L+ FK R L + + +++++
Sbjct: 85 LFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVPLEVMMLPLFKLTVGLHLIDS 144
Query: 143 WGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ ++ S + + F+ + +PR + ++A +DG T + F I PL +P
Sbjct: 145 YTGVILPFIVSPVAVFFFRQYALGLPRDLLDSARMDGCTEFGIFFRIMAPLMKPAFGAMI 204
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
++ + W +F++ +L + + T+ GL ++++ N I+GSV +P
Sbjct: 205 ILQSLNSWNNFLWPLIVLRSKE--MFTLPIGLSSLLS----PYGNNYDMLISGSVFAILP 258
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
+ I+F+ QK++++G+T G KG
Sbjct: 259 VIIIFLFFQKYFISGLTVGGVKG 281
emb|CAB59590.1| (AL132662) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 285
Score = 92.1 bits (225), Expect = 5e-18
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 12/263 (4%)
Query: 27 IFPVIWMILTSFAKNNNT-GFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+FPV WM+ T+F + + + L P WTLE++ + A + N+ ++ +
Sbjct: 31 LFPVYWMVTTAFKPSTDIQSYDPRLVPGAWTLEHFRKAVGADGF--ALFWRNSLLVTLSA 88
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN-IWG 144
+ + +YA++R+R++ R+ F+ Y I + ML+ +
Sbjct: 89 VLLALLVALGAAYAVARMRWRGRRQFMLAVFVAQMAPWESLIIPIYIISRDTGMLDRLPT 148
Query: 145 MALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+ L+Y + L F V +GF+ IP ++EAA +DG TR F + PL P ++ TS
Sbjct: 149 LTLIYFMIT-LPFTVVVLRGFIAGIPPELEEAAQVDGCTRAGAFRRVAFPLLAPGLMATS 207
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
L FI W +F ++++++ RT+ L + + + T+ +A + L A+P
Sbjct: 208 LFGFITAWNEFTYANFLIIKQQDS-RTLPVWLSSF----QSTFGTDWGATMAAATLFALP 262
Query: 263 ITILFIVMQKFYVNGITAGADKG 285
++F+ +Q+ G+ +G KG
Sbjct: 263 ALVIFLALQRHVTAGLASGGVKG 285
gb|AAD35894.1|AE001748_10 (AE001748) sugar ABC transporter, permease protein, putative
[Thermotoga maritima]
Length = 271
Score = 91.7 bits (224), Expect = 7e-18
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 27 IFPVIWMILTSFAKNNNT-GFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
++P W+ TSF N + SL P T NY+G + + ++ LNT I+A
Sbjct: 21 VWPFYWIAKTSFEAGGNVYKYPPSLIPYPATFSNYVGAWKTVKL--GNYYLNTIIIAGFG 78
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
+ N + +++Y L+R+ FK ++ L L Y L+ + +LN +
Sbjct: 79 TLLNVLFSLMVAYPLARIDFKGKQLVLFLILLPMMIPVQNTLIVNYLTLRKLGLLNTYTG 138
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
++ + G ++ + +IP+S ++AA IDGA + I PL +P I +
Sbjct: 139 VILPQAVTIFGIFMMRQAYLSIPKSFEDAARIDGAGELYIWWKIITPLIKPDIATLVVFQ 198
Query: 206 FIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITI 265
I W +F++ +L + Y L + + N AG VL +P+ +
Sbjct: 199 VITWWDNFLWPLIVLSDSN------KYPLSVALVYLNSTFQVNFRYTAAGIVLAILPVVL 252
Query: 266 LFIVMQKFYVNGITAG 281
LFI Q++ +N I G
Sbjct: 253 LFIFAQRYIINAIAGG 268
gb|AAD35505.1|AE001721_4 (AE001721) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 283
Score = 91.7 bits (224), Expect = 7e-18
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 31 IWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQ-YPYAHW--LLNTFILAVICAV 87
+W++L SF+++ GFV P TL+N+ ++ + YP W LNT +LA+
Sbjct: 35 VWLVLRSFSEDLVNGFV----PTKLTLKNWRFLWEEIKGYPNI-WQTTLNTALLALGVMG 89
Query: 88 ANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN-IWGMA 146
IT++ YALSR F R ++F L + +L ++ +L+ +WG+
Sbjct: 90 VEVAITSLGGYALSRYDFPGRSSMMKFILALHAFPAISLMTAVFYLLWTLKLLDTLWGVI 149
Query: 147 LVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
L+ G ++ KGF D IP ++ A +DG +R+Q + + LPL +P I T++ A
Sbjct: 150 LLKASLEVPWGTWIMKGFYDGIPWELEWAGLVDGYSRFQVWRRVLLPLVKPGIAVTAIFA 209
Query: 206 FIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSK-GSSATNLYQFIAGSVLIAVPI- 263
F+ W +F+F + T + QN+ T SK Y+F ++ AV +
Sbjct: 210 FLSGWSEFVF-----------VNTFIFS-QNLWTLSKYVKGFIGDYRFADYGLVTAVGLF 257
Query: 264 ----TILFIVMQKFYVNGITAGADKG 285
TI+F ++ +T G KG
Sbjct: 258 YMIPTIIFFFFVSKHMIKLTIGGVKG 283
emb|CAB61179.1| (AL132973) putative binding protein dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 287
Score = 90.9 bits (222), Expect = 1e-17
Identities = 65/262 (24%), Positives = 114/262 (42%), Gaps = 9/262 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQN--WTLENYIGIFNNSQYPYAHWLLNTFILAVI 84
+ PV+W++L S KN + F L + L+N +F Y W +N+ + AVI
Sbjct: 31 LLPVLWLVLAS-TKNRDALFSSDLLSLSDFSLLQNLKDLFAMDGGLYGRWYVNSLLYAVI 89
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWG 144
A ++ YA + RF+ ++ L Y + ++N +
Sbjct: 90 GAAVGALVSVACGYAFDKYRFRHKEKLFGLVLAAVMVPQTVLALPLYLMASEAGLVNTFW 149
Query: 145 MALVYVGGSGLGFYVFKGFL-DTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
+ V + G Y+ + F +P + EAA +DGA T+ + + P ++ L
Sbjct: 150 AVFIPVLFNPFGVYLGRIFARGYVPDEVLEAARVDGAGELTTYARVAFRMLGPGLITVFL 209
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQF-IAGSVLIAVP 262
W +F +L D + V+ GL NS S + Y I GS+L +P
Sbjct: 210 FQLTAIWNNFFLPMVMLS--DQDLYPVSLGLYQW--NSSASVSPEYYPVVIMGSLLAVLP 265
Query: 263 ITILFIVMQKFYVNGITAGADK 284
+ + F+++Q+F+ +G+TAGA K
Sbjct: 266 LILAFVLLQRFWRSGLTAGAVK 287
gi|2293306 (AF008220) sugar transporter [Bacillus subtilis]
>gi|2635513|emb|CAB15007| (Z99119) maltose transport
protein [Bacillus subtilis]
Length = 276
Score = 90.9 bits (222), Expect = 1e-17
Identities = 60/262 (22%), Positives = 124/262 (46%), Gaps = 13/262 (4%)
Query: 28 FPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAV 87
F +++LT+ K + +FP + + N+ + + + +NT I+ A+
Sbjct: 24 FIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAWERASL--GNSFINTMIITGFSAL 81
Query: 88 ANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMAL 147
++ +Y L+R K K + Y ++ M+N +A
Sbjct: 82 LLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIA- 140
Query: 148 VYVGGSG---LGFYVFKGFL-DTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
+++ + L +++ GF+ TIP+ + EAA IDGA + F I PL +P+ +
Sbjct: 141 IFINTAAYMPLTVFLYSGFIRSTIPKELVEAARIDGAGMLKIFFTIVFPLLKPITATICI 200
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPI 263
++ + W D+ F+ + L D K++T+ + G +A NL+ A +++ +P+
Sbjct: 201 ISCVFIWNDYQFAIFFL--QDQKVQTLTVAMAGFF----GENANNLHLVAAAALMAMLPM 254
Query: 264 TILFIVMQKFYVNGITAGADKG 285
+LF+ +QK+++ G+++GA KG
Sbjct: 255 VVLFLALQKYFIAGLSSGAVKG 276
gb|AAD33666.1|AF135398_3 (AF135398) putative integral membrane protein [Thermus brockianus]
Length = 276
Score = 90.5 bits (221), Expect = 2e-17
Identities = 57/212 (26%), Positives = 106/212 (49%), Gaps = 9/212 (4%)
Query: 75 LLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSIL 134
LLN+ +++ + + ++ + YAL+ +F+F+ F + Y ++
Sbjct: 71 LLNSVVVSGLYTLGGLLLSAMAGYALAVYQFRFKALVFSFIVATLTIPYFVVVIPQYILV 130
Query: 135 -KSINMLN-IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLP 192
+ + + N WG+ L ++ + FY+ + FL ++P S+ +AA +DGA + F I LP
Sbjct: 131 ARDLKLTNTFWGVILPFLANALGVFYMRQVFL-SLPSSLLDAARVDGAGEVRIFFQIALP 189
Query: 193 LSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQF 252
L RP + +L+ F+ W D+++ +L + VA G +T
Sbjct: 190 LVRPALAALALILFLNAWNDYLWPLLVLSQKEMYTAPVALGTLIGLTRVSWGG------I 243
Query: 253 IAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+ GS L+ VP +LF+ +Q+++V GITAGA K
Sbjct: 244 MVGSALMTVPFLLLFLFLQRYFVAGITAGAVK 275
gi|1255237 (U50952) XynB [Thermoanaerobacterium thermosulfurigenes]
Length = 301
Score = 89.7 bits (219), Expect = 3e-17
Identities = 69/291 (23%), Positives = 137/291 (46%), Gaps = 25/291 (8%)
Query: 13 TFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQS---LFPQNWTLENYIGIFNNSQY 69
T Y ++P + ++ SF N+ V+ LFP+ +T NY+ I ++ +
Sbjct: 18 TINYILLTIVIIVTLYPFVHVLAVSF--NDAIDTVRGGIYLFPRKFTTFNYVSILSDPEI 75
Query: 70 PYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXX 129
A + + + AVI +V N + I++YA+SR F R + +
Sbjct: 76 YNA--TIISALRAVIGSVLNVIASIIVAYAISRRDFVLRG--IVSKIFTYSMYFTSGLIP 131
Query: 130 XYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHI 189
Y +++ ++++N + + ++ S V + ++D +P S+ E+A IDGA+ + I
Sbjct: 132 YYLLIRDLHLMNNFLVYILPGIVSAWNIMVVRSYIDGLPASLVESAKIDGASELRIIFSI 191
Query: 190 TLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSK------- 242
PLS P++ +L +G W + F + + +P + T+ Y LQ ++ +++
Sbjct: 192 IFPLSVPVLATITLFVAVGQW-NSWFDTMLFCSMNPNLSTLQYELQKVLQSTQQFTQQAS 250
Query: 243 --------GSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
+S T A +V+ VPI +++ +QK++V G+T G+ KG
Sbjct: 251 FDMGLRNNSNSVTPESIRAAMTVVAVVPIMMVYPFLQKYFVKGLTIGSVKG 301
sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1) >gi|421634|pir||S33182
membrane protein - Streptomyces antibioticus
>gi|296489|emb|CAA80299| (Z22577) membrane protein
[Streptomyces antibioticus]
Length = 229
Score = 89.3 bits (218), Expect = 4e-17
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 52 PQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPF 111
P++ TL N F ++ P AH LN+ ++A+ A I T M+Y ++R R K +
Sbjct: 2 PRHPTLANVRQAF--AEQPLAHAALNSLLVALATAAVTVLIATPMAYVMARHRTKAARAA 59
Query: 112 LQFALXXXXXXXXXXXXXXYSILKSINMLN-IWGMALVYVGGS-GLGFYVFKGFLDTIPR 169
+ + + +LK + +++ + G+ LVYV S ++ G +P
Sbjct: 60 TGWVVVSQAFPFVLLIIPLFLVLKRLRLIDSLTGLVLVYVVWSLPFALWMLAGHARAVPA 119
Query: 170 SIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGD----P 225
++EAA +DGA R +T +T+PL P I T+L AF+ W +F F+ +L P
Sbjct: 120 ELEEAAAVDGAGRVRTLTSVTVPLLAPGIAATALFAFVTAWNEFFFALVLLKSPHRQTLP 179
Query: 226 KIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+ T G + + T+ G++A L +P F ++Q+ +G+ GA K
Sbjct: 180 VVLTHFIGAEGVPTSPAGAAA----------FLATLPSLAFFALVQRRITSGLLTGAVK 228
emb|CAB72404.1| (AL138978) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 296
Score = 88.9 bits (217), Expect = 5e-17
Identities = 63/263 (23%), Positives = 123/263 (45%), Gaps = 13/263 (4%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
++ P+ W++L++ + + ++ P TL+N+ I + + LLN+ IL
Sbjct: 44 FVLPLAWVVLSALDPHAS---LRVKVPDGVTLDNFDAILT-PEITFTP-LLNSLILCGGA 98
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
+ + +Y LSR R + +PFL L Y++ +NM++
Sbjct: 99 TLLTVVCAVLAAYPLSRFRSRLNRPFLLTILFATSLPITAIMVPVYALFVRVNMIDTMQG 158
Query: 146 ALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
+ + S L F ++ K F+D +P+ ++EAA DGA+ +Q+ + I LPL P + ++
Sbjct: 159 TIFFFAASQLPFAIWLMKNFMDGVPKELEEAAWTDGASSFQSLLRIVLPLMGPGVAVVTV 218
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPI 263
+F+ W +F +L D +V+ N ++G A Q A S++ + P+
Sbjct: 219 FSFVMMWGNFFVPFMLLLSPDQMPASVSI---NDFFGNRGMVAYG--QLAAFSIVYSTPV 273
Query: 264 TILFIVMQKFYVNGIT-AGADKG 285
+L++++ + G GA KG
Sbjct: 274 VLLYVLISRRLGGGFALGGAVKG 296
emb|CAB55716.1| (AL117387) putative binding-protein-dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 280
Score = 88.5 bits (216), Expect = 6e-17
Identities = 50/155 (32%), Positives = 87/155 (55%), Gaps = 7/155 (4%)
Query: 133 ILKSINMLNIWGMALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHIT 190
+L+ I ++ ++++ + + F +VF G++ +PRS+DEAA IDGA R++T I
Sbjct: 131 VLRGIGLMGTLPGLILFMTATTIPFTLFVFFGYIRVLPRSLDEAAAIDGAGRYRTLWRII 190
Query: 191 LPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLY 250
LPL RP++ ++ + W DF ILG G + TV G+ + G +T+
Sbjct: 191 LPLMRPIVATVFILNSLSVWNDFASPQMILGPGS-GVYTVTTGVYAAV----GQYSTDYT 245
Query: 251 QFIAGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
+ +L +PI ++F+VMQ+ ++G+ AGA KG
Sbjct: 246 KVFPTLLLAVIPILVIFVVMQRHIMSGLAAGAVKG 280
dbj|BAA28361| (D85027) integral membrane protein [Thermus sp. A4]
Length = 247
Score = 88.5 bits (216), Expect = 6e-17
Identities = 61/237 (25%), Positives = 114/237 (47%), Gaps = 11/237 (4%)
Query: 50 LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRK 109
L P N EN + ++ + A W N+ +++ + V ++ + YAL+ RF+ +
Sbjct: 19 LLPGNAFWENLRNLQADTDFFRALW--NSLVVSGLYTVGGLLLSALAGYALAVYRFRGQA 76
Query: 110 PFLQFALXXXXXXXXXXXXXXYSIL-KSINMLNI-WGMALVYVGGSGLGFYVFKGFLDTI 167
F + Y ++ + + + N WG+ L ++ + FY+ + FL ++
Sbjct: 77 LFFSLIVATLTIPYFVVVIPQYILVARELKLTNTYWGVVLPFLANALGVFYMRQVFL-SL 135
Query: 168 PRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKI 227
P S+ +AA +DGA+ + F I LP+ P + +L+ F+ W D+++ +L +
Sbjct: 136 PPSLLDAARVDGASEARIFFRIALPVVTPSLAALALILFLTAWNDYLWPLLVLSQKEMYT 195
Query: 228 RTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
VA G +T + GSVL+ P +LF+ +Q+++V GITAGA K
Sbjct: 196 APVALGTLIGLTRVSWGG------IMVGSVLMTAPFVVLFLFLQRYFVAGITAGAVK 246
sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESQ
>gi|2633012|emb|CAB12518| (Z99107) similar to lactose
permease [Bacillus subtilis]
Length = 296
Score = 87.8 bits (214), Expect = 1e-16
Identities = 64/257 (24%), Positives = 122/257 (46%), Gaps = 10/257 (3%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQ-SLFPQNWTLENYI-GIFNNSQYPYAHWLLNTFILAVI 84
++PVIW+ ++SF ++ + SL P + L NY G + P+ ++ N+ I+ +
Sbjct: 41 LYPVIWLFVSSFKESASIFTTSHSLIPDPFILSNYAEGWKGIAGQPFLTFIKNSAIIVGL 100
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWG 144
+ + +++Y +R+ FK +K + + Y + ++ LN +
Sbjct: 101 STIGAVMSSAVIAYGFARIPFKGKKFWFACMMGTLMLPHEVLMIPQYIMFAKLDWLNSF- 159
Query: 145 MALVYVGGSGLGFYVFK--GFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+V G F++F F+ TIP +DEAA IDG R+ F I LPL P + ++
Sbjct: 160 KPIVVPQFFGHAFFIFLMIQFIRTIPEELDEAARIDGCGRFACFWRIILPLIAPALATSA 219
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
+ +F W + + +L P++ V+ L+ + SA+N A S + +P
Sbjct: 220 IFSFYWKWEELI--QPLLYLNKPELYPVSLALKLFLDT---ESASNWGAMFAMSAVSLLP 274
Query: 263 ITILFIVMQKFYVNGIT 279
+ ++F + QK+ V GI+
Sbjct: 275 VILVFFLFQKYIVQGIS 291
emb|CAB55534.1| (AL117322) putative binding-protein-dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 296
Score = 87.0 bits (212), Expect = 2e-16
Identities = 64/273 (23%), Positives = 121/273 (43%), Gaps = 30/273 (10%)
Query: 27 IFPVIWMILTSFAK-----NNNTGFVQSLFPQNWTLENYIGIF-------------NNSQ 68
+FP WM+ T+ ++TG V P + T+ N++ + + +Q
Sbjct: 27 VFPFYWMVRTALTPAADLYTDSTGLV----PDHPTMINFLRVLGLTSQEEAVAAGGSGAQ 82
Query: 69 YPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXX 128
+ +LLN+ + + + AV T + YA +RLRF R +
Sbjct: 83 VDFLRYLLNSVVYSGLIAVLQTLFCAMAGYAFARLRFPGRDLVFGVLIAALMVPPIFTVL 142
Query: 129 XXYSILKSINMLNIW-GMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFI 187
+ ++K + LN + GM V + + + F ++PR ++EAA +DG W F
Sbjct: 143 PNFVLVKDLGWLNTFVGMVAPSVLMTPFAVFFLRQFFLSVPREVEEAAILDGVGPWGIFW 202
Query: 188 HITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIR--TVAYGLQNMMTNSKGSS 245
+ +P++R ++ L + W D+++ +L G D + R TVA G+ + +
Sbjct: 203 RVVMPMTRGPLLTVGLTTTVWAWKDYLWP--LLSGRDEETRVLTVALGIFQQQSPNTQPD 260
Query: 246 ATNLYQFIAGSVLIAVPITILFIVMQKFYVNGI 278
T L +AGS L +P+ +L I++ + V +
Sbjct: 261 WTGL---MAGSALSVLPVLVLLILLGRRLVESL 290
gb|AAD12048.1| (AF045609) AglG [Sinorhizobium meliloti]
Length = 305
Score = 86.2 bits (210), Expect = 3e-16
Identities = 64/247 (25%), Positives = 104/247 (41%), Gaps = 14/247 (5%)
Query: 46 FVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRF 105
F + P +TL+NY + S LN+ +AV V I +YAL+ + F
Sbjct: 65 FFTATTPPRFTLDNYAEVL--SAAGIGRSFLNSLTVAVPSTVIPILIAAFAAYALAWMPF 122
Query: 106 KFRKPFLQFALXXXXXXXXXXXXXXYSILKSINML------NIWGMALVYVG-GSGLGFY 158
R L + + + G+ L + G G L Y
Sbjct: 123 PGRAVLLAVVVGLLVVPLQMSLIPLLQLYNGVGAFFGVSAKTYMGIWLAHTGFGLPLAIY 182
Query: 159 VFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSY 218
+ + ++ +PR I E+A +DGA+ + F+ I LPLS P + ++ F+ W D + +
Sbjct: 183 LLRNYMAGLPREIMESARVDGASDFDIFVKIILPLSFPALASFAIFQFLWTWNDLLVAIV 242
Query: 219 ILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGI 278
LG GD K+ L + N GS N A + + V I+F +Q++ V G+
Sbjct: 243 FLGAGDDKL-----VLTGRLVNLLGSRGGNWEILTASAFITIVVPLIVFFALQRYLVRGL 297
Query: 279 TAGADKG 285
AG+ KG
Sbjct: 298 LAGSVKG 304
dbj|BAA82142.1| (AB024743) ORF2 [Clostridium stercorarium]
Length = 254
Score = 85.8 bits (209), Expect = 4e-16
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 56 TLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFA 115
TL NY +FN A ++ T + ++ V N F T++++Y +SR + FRK F+
Sbjct: 6 TLYNYYVVFNMDTIYNAFYISVTKTIVIV--VTNLFFTSMLAYTISRKEYIFRK-FIT-T 61
Query: 116 LXXXXXXXXXXXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAA 175
+ Y ++K + +LN + + + S V + ++ TIP S+ E+A
Sbjct: 62 VFVLTMYFNAGLIPNYLLIKKLGLLNTFSVYWIPNIVSAFNLIVMRTYIKTIPESLIESA 121
Query: 176 TIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQ 235
IDGA + + I LPL P + +L +G W + F +++ + T+ Y LQ
Sbjct: 122 KIDGAREFHIYWRIVLPLITPCLATIALFVAVGSW-NSWFDTFLYNSARQDLSTLQYELQ 180
Query: 236 NMM----------------------TNSKGSSATNLYQFIAGSVLI--AVPITILFIVMQ 271
++ T+ GS Q I ++ I +VPI +++ +Q
Sbjct: 181 KLLSSTMTAGTRGAPAGINEAGRAGTSGTGSGNVTTPQSIRAAITIFTSVPILLVYPFLQ 240
Query: 272 KFYVNGITAGADK 284
+++++G+ G+ K
Sbjct: 241 RYFIHGLAIGSVK 253
emb|CAB61806.1| (AL133236) putative sugar-permease [Streptomyces coelicolor A3(2)]
Length = 293
Score = 85.4 bits (208), Expect = 5e-16
Identities = 64/258 (24%), Positives = 118/258 (44%), Gaps = 15/258 (5%)
Query: 29 PVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVA 88
P+I +++ S S W NY+ IF S+ P +L N+ + + V
Sbjct: 49 PIIMILVLSVRSGQTASGTYS-----WNFSNYVEIF--SKTPVLDYLYNSLAVTLGTTVF 101
Query: 89 NTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN-IWGMAL 147
I + Y +SRLR +F + + + I M + + G+A+
Sbjct: 102 AVVIGALAGYPMSRLRNRFIGGYTLSLFVVQSLPVIVFVIPLFVVFAKIGMADTLSGVAV 161
Query: 148 VYV-GGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAF 206
+++ GG + ++ + D+IP ++EAA +DGA+ W F+ + L S P I+ ++ +F
Sbjct: 162 IFIAGGMAVTCWMMAAYYDSIPVELEEAAWVDGASLWGGFVRVVLRNSYPGILSAAIFSF 221
Query: 207 IGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITIL 266
+ W D++ ++ L T+ GLQ +AT+ +A SV++ +P I+
Sbjct: 222 LVAWNDYLVATVFL--RSQSNFTLPIGLQTYFQ----QNATDWGPVMAMSVVMLLPPVIV 275
Query: 267 FIVMQKFYVNGITAGADK 284
F V+ +F+ G GA K
Sbjct: 276 FAVLNRFFSIGGIGGAIK 293
emb|CAA15784| (AL009199) probable transmembrane transport protein [Streptomyces
coelicolor]
Length = 302
Score = 85.0 bits (207), Expect = 7e-16
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 16/261 (6%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
I P++W++++SF P +W ENY + ++ + LN+ I+ V
Sbjct: 49 IVPMLWVLMSSFKSTGEILSSPFSLPDHWRFENYANAWTDANI--GKYFLNSVIVVVSAL 106
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-GM 145
+ + + +Y L+R F R+ L + L++ +LN G+
Sbjct: 107 ILVMLLGAMCAYVLARFEFPGRRLIYYVMLAGLTFPVFLAIVPLFFQLQNFGLLNTRPGL 166
Query: 146 ALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
L YV + L F +F F ++P + EAA IDGA W+ F + LP++RP + ++
Sbjct: 167 ILTYVAFA-LPFTMFFLYSFFRSLPHDVYEAALIDGAGDWRAFFQVMLPMARPGMAAVAI 225
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRT---VAYGLQNMMTNSKGSSATNLYQFIAGSVLIA 260
F+G W F+ + D + T AY + G+ A V+
Sbjct: 226 FNFLGLWNQFLLPVALNTDQDKWVLTQGMAAYASSQVYDIDYGA-------LFAAIVVTV 278
Query: 261 VPITILFIVMQKFYVNGITAG 281
VP+ +++ V Q+ ++ G
Sbjct: 279 VPVLLVYCVFQRRIAGSVSQG 299
emb|CAB41202.1| (AL049661) putative binding protein dependent transport protein
[Streptomyces coelicolor]
Length = 279
Score = 84.7 bits (206), Expect = 9e-16
Identities = 59/264 (22%), Positives = 111/264 (41%), Gaps = 23/264 (8%)
Query: 29 PVIWMILTSFAKNNN-TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAV 87
P +WMI+TS + + + L P+ W +NY + P+ + N+ +++
Sbjct: 17 PFLWMIVTSLKTDPDLASYPPGLLPRIWDWDNYPEALEYA--PFGTYFRNSLFISLGHTA 74
Query: 88 ANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSI---------- 137
N + ++ YAL+R+ F+ L Y I K I
Sbjct: 75 LNLALASMAGYALARIPFRGSTVIFMGVLATMMIPTYTKIVPQYLIAKGIPFFGGNDYLG 134
Query: 138 ----NMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPL 193
L+ W ++ + ++F+ F ++PR ++EAA IDG + + + PL
Sbjct: 135 RGGHGWLDSWWGLIIPGALTPFAIFLFRQFYLSLPRELEEAARIDGMGEFGIYARVMTPL 194
Query: 194 SRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFI 253
+P I L+ F W +F++ I D +R + GL + + A +
Sbjct: 195 VKPAIATVGLLTFESSWNNFLWPLIIT--TDTDLRVIQVGLSAFQQADQNAWA----YMM 248
Query: 254 AGSVLIAVPITILFIVMQKFYVNG 277
AG+ L +P+ LF++ Q+++V G
Sbjct: 249 AGTTLATIPMVALFLLAQRYFVQG 272
gb|AAD35683.1|AE001734_10 (AE001734) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 277
Score = 83.9 bits (204), Expect = 2e-15
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 58 ENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALX 117
+NY+ +N + +P + NTF +A + ++ +YA S + F R L
Sbjct: 59 QNYVDAWNAAPFP--RYYFNTFFVATTTTLLEVVTASLAAYAFSWMVFPGRDFIFGLFLA 116
Query: 118 XXXXXXXXXXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATI 177
+ + + ++ + ++ S ++ + TIPR + +AA I
Sbjct: 117 TMMIPGEVLLVPNFITISKLGWIDTYYALIIPWIVSVFAIFLLRQHFLTIPRELFDAAKI 176
Query: 178 DGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNM 237
DG + W+ + +PLS+P ++ ++L+ F+G W F++ ++ K RT+ GLQ
Sbjct: 177 DGCSHWRFLWQMVVPLSKPAVITSALLKFVGSWNAFLW--VLIVTNSEKYRTLPVGLQAF 234
Query: 238 MTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGI 278
++ T +A + +P+ ILFI QK+++ GI
Sbjct: 235 SSD----VGTQYNLLMAAATFSILPVVILFIFTQKYFIQGI 271
sp|P10906|UGPE_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN UGPE
>gi|72520|pir||MMECUE glycerol-3-phosphate transport
protein ugpE - Escherichia coli >gi|43248|emb|CAA31533|
(X13141) ugpE protein (AA 1-281) [Escherichia coli]
>gi|466587 (U00039) CG Site No. 17791 [Escherichia coli]
>gi|1789860 (AE000421) sn-glycerol 3-phosphate transport
system, integral membrane protein [Escherichia coli]
Length = 281
Score = 83.1 bits (202), Expect = 3e-15
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 49 SLFPQNWTLENYIGIFNN----SQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLR 104
+L P LEN I+ N + P+ LLN+F++A + ++ + ++A+ R
Sbjct: 47 TLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFR 106
Query: 105 FKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFL 164
F R F ++ ++ ML+ + + + S ++F+ F
Sbjct: 107 FPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATFLFRQFF 166
Query: 165 DTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGD 224
T+P + EAA IDGA+ + F I PLS+ + ++ FI W +++ I+ D
Sbjct: 167 MTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLII--TD 224
Query: 225 PKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGI 278
+ T G++ M+ +G++ N + +L +P ++ +VMQ+ +V G+
Sbjct: 225 VDLGTTVAGIKGMIATGEGTTEWN--SVMVAMLLTLIPPVVIVLVMQRAFVRGL 276
emb|CAB49113.1| (AJ248283) TRANSMEMBRANE SUGAR TRANSPORT PROTEIN [Pyrococcus
abyssi]
Length = 289
Score = 82.3 bits (200), Expect = 5e-15
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 33 MILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNS-------QYPYAHWLLNTFILAVIC 85
++L+SF+ N T F S F + TLEN+I +F + A +LNT I+A+
Sbjct: 33 LMLSSFSTNMITNFDFSQF--HLTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGV 90
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXY-----SILKSINML 140
+ T I+ + YALSR+ FK RK + + Y S + +++
Sbjct: 91 SGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLV 150
Query: 141 NIWGMALVYVGGSGL----GFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRP 196
++ V + L ++ KGF DT+P + + IDGA+R + I LPL +P
Sbjct: 151 RLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKP 210
Query: 197 MIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGS 256
I+ +L +F+ W D ++ L + L + + + T++ A
Sbjct: 211 GILAVALFSFLAGWQDIIYVRTFL---------IDQTLATFIEANIEAEYTHMPMIAAAG 261
Query: 257 VLIAVPITILFIVMQKFYVNGITAG 281
L +P I F+ Q+ + G + G
Sbjct: 262 TLYLLPTIIFFLTAQQLLLRGYSGG 286
sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE
PROTEIN AMYC >gi|481066|pir||S37705 amyC protein -
Thermoanaerobacterium thermosulfurigenes >gi|565384
(M57692) membrane protein for maltose transport
[Thermoanaerobacterium thermosulfurigenes]
>gi|228283|prf||1802282B sugar transport protein
[Thermoanaerobacterium thermosulfurigenes]
Length = 274
Score = 82.3 bits (200), Expect = 5e-15
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSL-FPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVI 84
WI P +++ SF K F +L P++ L+NY N A NT I+ V
Sbjct: 22 WISPFYIILVNSF-KTKLELFTNTLSLPKSLMLDNYKTAAANLNLSEA--FSNTLIITVF 78
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWG 144
+ +++ +YAL R++ K + + L G
Sbjct: 79 SILIIAIFSSMTAYALQRVKRKSSVIIYMIFTVAMLIPFQSVMIPLVAEFGKFHFLTRSG 138
Query: 145 MALVYVG-GSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
+ +Y+G GS LG +++ G L IP S+DEAA IDG +R++ + +I LPL P + ++
Sbjct: 139 LVFMYLGFGSSLGVFLYYGALKGIPTSLDEAALIDGCSRFRIYWNIILPLLNPTTITLAV 198
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPI 263
+ + W D++ S ++ K+ + L S+ + NL +AG + +P+
Sbjct: 199 LDIMWIWNDYLLPSLVIN----KVGSRTLPLMIFYFFSQYTKQWNL--GMAGLTIAILPV 252
Query: 264 TILFIVMQKFYVNGITAGADK 284
I + + Q+ V I AGA K
Sbjct: 253 VIFYFLAQRKLVTAIIAGAVK 273
emb|CAB46401.1| (AL096743) putative integral membrane sugar transport protein
[Streptomyces coelicolor]
Length = 292
Score = 80.8 bits (196), Expect = 1e-14
Identities = 68/265 (25%), Positives = 114/265 (42%), Gaps = 16/265 (6%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNN----SQYPYAHWLLNTFIL 81
+ P+ WM LTSF ++ F + TL+ Y F S +P L+N+ +
Sbjct: 38 FFLPIAWMALTSFHSESDAATNPPSFAASLTLDGYREFFGAGGGASPWPA---LVNSAVA 94
Query: 82 AVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINML- 140
++ + + +YALS K L F L Y K+ +ML
Sbjct: 95 SIASTLFVLVLALPAAYALSIRPVKKWTDVLFFFLSTKMLPVVAGLLPIYLFAKNTDMLD 154
Query: 141 NIWGMALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIV 199
NIW + ++Y + + ++ + FL +P +I EAA +DGA + + P++ P I
Sbjct: 155 NIWLLVILYTSMNLPIAVWMMQSFLAEVPVAIIEAARVDGAKLPTILVRVVAPIALPGIA 214
Query: 200 YTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLI 259
TSL+ FI W + +F+ + G VA +T S L + A S++I
Sbjct: 215 ATSLICFIFSWNELLFARVLTG-------VVAETAPVFLTGFITSQGLFLAKVCAASLVI 267
Query: 260 AVPITILFIVMQKFYVNGITAGADK 284
++P+ Q V G++ GA K
Sbjct: 268 SLPVLAAGFAAQDKLVQGLSLGAVK 292
gi|3322335 (AE001192) sugar ABC transporter, permease protein (y4oR)
[Treponema pallidum]
Length = 273
Score = 80.8 bits (196), Expect = 1e-14
Identities = 65/261 (24%), Positives = 114/261 (42%), Gaps = 21/261 (8%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNW----TLENYIGIFNNSQYPYAHWLLNTFILA 82
+FP+ M+ TS ++ + P W T+ENY + + A L N+ ++
Sbjct: 25 MFPLYEMVATSLKRDADA----FRLPPAWFFIPTIENYRQLLQEHHFGRA--LYNSLVVT 78
Query: 83 VICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN- 141
+ V + +YA+ R R++ +K L + ++ ++N
Sbjct: 79 LSSTVVSVSAGAAAAYAMQRFRYRGKKAITVALLLLRVIPPVVLVIPIFVWWTALGLVNS 138
Query: 142 IWGMALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIV 199
+ G+ALVY G + F +V F+ IP S+DE+A +DG + W F I +PL P +
Sbjct: 139 LAGLALVY-GALNVPFNVWVITTFVAEIPPSLDESAKLDGCSHWMIFTRIVMPLITPALA 197
Query: 200 YTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLI 259
S+ F W ++M + + K RT+ L +T+ S + A + LI
Sbjct: 198 LVSIFTFRFAWNEYMLGFALT---NRKTRTLPVALSLFLTD----SGVEWGRITAAATLI 250
Query: 260 AVPITILFIVMQKFYVNGITA 280
A+P + K+ V G+TA
Sbjct: 251 AIPACVFTFAAAKYLVVGLTA 271
sp|P53561|YTCP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN IN OPUD-BIOI INTERGENIC
REGION (ORF3) >gi|2293190 (AF008220) transporter
[Bacillus subtilis] >gi|2635501|emb|CAB14995| (Z99119)
similar to ABC transporter (permease) [Bacillus
subtilis]
Length = 286
Score = 80.4 bits (195), Expect = 2e-14
Identities = 69/270 (25%), Positives = 122/270 (44%), Gaps = 16/270 (5%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQS-LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+ P I +I SFA + L P ++L+ Y IF+ + Y L++ F+ +
Sbjct: 22 VLPFIHVIAASFATVEEVVSKKFILIPTTFSLDAYRYIFS-TDIIYKSLLVSVFVTVIGT 80
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
AV+ F++++M+Y LSR R+P + L + ++KS+ +L+ +
Sbjct: 81 AVS-MFLSSLMAYGLSRRDLIGRQPLM--FLVVFTMLFSGGMIPTFLVVKSLGLLDSYWA 137
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
++ + + K F IP S++E+A IDG F I LPLS P I SL
Sbjct: 138 LILPTAINAFNLIILKNFFQNIPSSLEESAKIDGCNDLGIFFKIVLPLSLPAIATISLFY 197
Query: 206 FIGPWLDFMFSSYILGGGDP--------KIRTVAYGLQNMMTNSKGSSATNLYQFIAGSV 257
+ W +M + L +I V+ G+Q M + GS + Q I +V
Sbjct: 198 AVTYWNTYMTAILYLNDSAKWPIQVLLRQIVIVSSGMQGDM-SEMGSGSPPPEQTIKMAV 256
Query: 258 LI--AVPITILFIVMQKFYVNGITAGADKG 285
++ +P+ +++ +QK + G G+ KG
Sbjct: 257 IVVATIPVLLVYPFIQKHFAKGALLGSVKG 286
dbj|BAA10819| (D64006) membrane bound sugar transport protein [Synechocystis sp.]
Length = 298
Score = 80.4 bits (195), Expect = 2e-14
Identities = 64/270 (23%), Positives = 114/270 (41%), Gaps = 20/270 (7%)
Query: 26 WIFPVIWMILTSFAKNNN-------TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNT 78
W P + + ++S + T F L + L NY + +S A LN+
Sbjct: 37 WTLPSLGLFISSLRPRGDMLSTGWWTVFWHPLEITQFYLGNYGDVLRSSGMGEA--FLNS 94
Query: 79 FILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSIN 138
+AV V I T +YA + + F R+ + + +
Sbjct: 95 LTIAVPATVIPIAIATFAAYAFAWMTFPGRQLLFILVVCLLVVPLQTTLIPVLRVYAQLG 154
Query: 139 M----LNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLS 194
+ L +W Y G LG Y+ + ++ +P+ + EAA +DGA+ + F + +PLS
Sbjct: 155 LAGTFLGVWLAHTAY--GLPLGIYLLRNYIGALPKDLIEAAAVDGASHLKIFTKLIVPLS 212
Query: 195 RPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIA 254
P I ++ F+ W D + + L GG + V L N++ GS + Y A
Sbjct: 213 MPAIASFAVFQFLWVWNDLLVALVYL-GGTADVAPVTIQLSNLV----GSRGQDWYLLTA 267
Query: 255 GSVLIAVPITILFIVMQKFYVNGITAGADK 284
G+ + + ++F +Q+++V GI AG+ K
Sbjct: 268 GAFISMIVPLMVFFGLQRYFVRGILAGSVK 297
sp|P39129|LPLC_BACSU LPLC PROTEIN >gi|450566 (L19164) transmembrane protein [Bacillus
subtilis] >gi|2633025|emb|CAB12531| (Z99107)
transmembrane lipoprotein [Bacillus subtilis]
Length = 295
Score = 80.0 bits (194), Expect = 2e-14
Identities = 63/268 (23%), Positives = 119/268 (43%), Gaps = 13/268 (4%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQS-LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
I P +++I SFA +FP+ +TL+ Y +F+ + + + + + V+
Sbjct: 32 ILPFLYIIAGSFATEAELAQRSFFIFPKTFTLDAYKYVFSTPTFLRSMGV--SIFITVVG 89
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
F T M+Y L++ K R L + Y ++KS+ +L+ +
Sbjct: 90 TAVQLFFTFTMAYPLAKRHVKGRNLLLNLVIFSMLFSGGMIPT--YLVVKSLGLLDTYWA 147
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
++ + + + K F +PR ++E+A IDG + F I LPLS+P+I +L
Sbjct: 148 LILPMAINPFNLIIIKNFFQQLPRELEESAKIDGCSEIGVFWRIALPLSKPVIATFALFY 207
Query: 206 FIGPWLDFMFS-SYILGGGDPKIRTV--AYGLQNMMTNSKGSSATNLYQ-----FIAGSV 257
+G W DF + YI ++ V + + +T + G + N +A V
Sbjct: 208 AVGIWNDFFHALLYINDSAKWPLQMVLRQVTILSDLTATNGDTMQNAVPPEQGIKLAVIV 267
Query: 258 LIAVPITILFIVMQKFYVNGITAGADKG 285
+ +PI ++ +QK + G+ G+ KG
Sbjct: 268 IATLPILAVYPFLQKHFAKGMLIGSVKG 295
emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus]
Length = 169
Score = 79.6 bits (193), Expect = 3e-14
Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 155 LGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM 214
L ++ +GF +IP+ ++EAA +DGAT +Q F + LPL+ P + T++ F+ W + +
Sbjct: 46 LSIWILRGFFASIPKELEEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDELL 105
Query: 215 FSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIA-VPITILFIVMQKF 273
F+ + TV G++N + N + N Y + + +A +P+ +LF +Q+
Sbjct: 106 FAQVLT---TEATATVPVGIRNFVGNYQ-----NRYDLVMAAATVATLPVLVLFFFVQRQ 157
Query: 274 YVNGITAGADKG 285
+ G+TAGA KG
Sbjct: 158 LIQGLTAGAVKG 169
emb|CAB02073| (Z79702) uspE [Mycobacterium tuberculosis]
Length = 274
Score = 76.9 bits (186), Expect = 2e-13
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 13/279 (4%)
Query: 9 KLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNN--TGFVQSLFPQNWTLENYIGIFNN 66
++S T Y + P + +LTSF + TG L P+ TL NY I +
Sbjct: 6 RVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQL-PRPPTLANYADIADA 64
Query: 67 SQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXX 126
+ + T ++ + + + + +YA +RL+F+ R +
Sbjct: 65 G---FRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVT 121
Query: 127 XXXXYSILKSINMLN-IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQT 185
Y ++ + + N W + L ++ GS ++ + IP + AA +DGA
Sbjct: 122 VVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLDV 181
Query: 186 FIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSS 245
+H+ +P SRP++ +++ + W +FM+ I G ++ TVA N + +
Sbjct: 182 IVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWTL 241
Query: 246 ATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
+A + + VP+ LF+ Q+ V I K
Sbjct: 242 V------MAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
gi|2293416 (AF007800) MtlG [Pseudomonas fluorescens]
Length = 276
Score = 75.7 bits (183), Expect = 5e-13
Identities = 67/260 (25%), Positives = 111/260 (41%), Gaps = 13/260 (5%)
Query: 28 FPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAV 87
FP+ WM+LTSF + F TLENY+ I S Y W N+ +++
Sbjct: 27 FPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSNYFSYAW--NSVLISFSATA 84
Query: 88 ANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-GMA 146
I+ +Y+++ K K L + L Y + KS +L+ +
Sbjct: 85 LCLLISVPAAYSMAFYETKRTKSTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLDTRIALI 144
Query: 147 LVY--VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
++Y + + + V+ F D IP+ I EAA +DGAT WQ + + LP+++ + T L+
Sbjct: 145 IIYTLINLPIVVWMVYTYFKD-IPKDILEAARLDGATLWQEMVRVLLPIAKGGLASTVLL 203
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
+ I W + +S + A L ++ + + A S L PI
Sbjct: 204 SLILCWNEAFWSLNLTSSN-------AAPLTALIASYSSPEGLFWAKLSAVSTLACAPIL 256
Query: 265 ILFIVMQKFYVNGITAGADK 284
I + QK V G++ GA K
Sbjct: 257 IFGWISQKQLVRGLSFGAVK 276
sp|P29824|LACG_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN LACG
>gi|418703|pir||MMAGCG membrane protein lacG -
Agrobacterium radiobacter
Length = 273
Score = 74.5 bits (180), Expect = 1e-12
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 21/278 (7%)
Query: 7 QRKLSLTFRYXXXXXXXXXWIFPVIWMIL-----TSFAKNNNTGFVQSLFPQNWTLENYI 61
+R+L +Y IFP IWM++ TS F +LF +N
Sbjct: 6 RRRLPDIVQYSVLSLAAFLSIFPFIWMVIGTTNTTSQIIRGKVTFGTALF------DNIA 59
Query: 62 GIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXX 121
F P W N+ +A++ ++++ Y R K R+ L
Sbjct: 60 SFFAQVDVPLVFW--NSVKIALVGTALTLLVSSLAGYGFEMFRSKLRERVYTVILLTLMV 117
Query: 122 XXXXXXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGAT 181
+ ++ +LN ++ + S + F+ P + +AA +DG
Sbjct: 118 PFAALMIPLFMLMGQAGLLNTHIAIMLPMIASAFIIFYFRQASKAFPTELRDAAKVDGLK 177
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNS 241
WQ F +I +P+ R ++ F+ W ++++ +L D K T ++ +S
Sbjct: 178 EWQIFFYIYVPVMRSTYAAAFVIVFMLNWNNYLWPLIVLQSNDTKTIT-------LVVSS 230
Query: 242 KGSSATNLY-QFIAGSVLIAVPITILFIVMQKFYVNGI 278
S+ + Y + G++L +P ++F MQ+ +V G+
Sbjct: 231 LASAYSPEYGTVMIGTILATLPTLLVFFAMQRQFVQGM 268
emb|CAA47163| (X66596) lacG [Agrobacterium radiobacter]
Length = 272
Score = 74.5 bits (180), Expect = 1e-12
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 21/278 (7%)
Query: 7 QRKLSLTFRYXXXXXXXXXWIFPVIWMIL-----TSFAKNNNTGFVQSLFPQNWTLENYI 61
+R+L +Y IFP IWM++ TS F +LF +N
Sbjct: 5 RRRLPDIVQYSVLSLAAFLSIFPFIWMVIGTTNTTSQIIRGKVTFGTALF------DNIA 58
Query: 62 GIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXX 121
F P W N+ +A++ ++++ Y R K R+ L
Sbjct: 59 SFFAQVDVPLVFW--NSVKIALVGTALTLLVSSLAGYGFEMFRSKLRERVYTVILLTLMV 116
Query: 122 XXXXXXXXXYSILKSINMLNIWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGAT 181
+ ++ +LN ++ + S + F+ P + +AA +DG
Sbjct: 117 PFAALMIPLFMLMGQAGLLNTHIAIMLPMIASAFIIFYFRQASKAFPTELRDAAKVDGLK 176
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNS 241
WQ F +I +P+ R ++ F+ W ++++ +L D K T ++ +S
Sbjct: 177 EWQIFFYIYVPVMRSTYAAAFVIVFMLNWNNYLWPLIVLQSNDTKTIT-------LVVSS 229
Query: 242 KGSSATNLY-QFIAGSVLIAVPITILFIVMQKFYVNGI 278
S+ + Y + G++L +P ++F MQ+ +V G+
Sbjct: 230 LASAYSPEYGTVMIGTILATLPTLLVFFAMQRQFVQGM 267
sp|Q00751|MSMG_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE PROTEIN MSMG
>gi|282319|pir||D42400 membrane protein MsmG -
Streptococcus mutans >gi|153739 (M77351) membrane
protein [Streptococcus mutans]
Length = 277
Score = 73.7 bits (178), Expect = 2e-12
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 20/288 (6%)
Query: 5 KTQRKLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIF 64
K + K++ ++Y + P++ + +SF K + FP TL+NY +
Sbjct: 2 KKEEKINYFWKYVLLTVGGILILIPLMVTVFSSFKKTKDIMNHFFAFPNPITLDNYKRLL 61
Query: 65 NNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPF---LQFALXXXXX 121
+ Y W N+ ++ V+ + +Y+++R RK F +
Sbjct: 62 ADGVGGY-FW--NSTVITVLSVLVVMLFIPAAAYSIAR-NMSRRKAFNIMYSLLILGIFV 117
Query: 122 XXXXXXXXXYSILKSINMLNIWGMALVYVGGS-GLGFYVFKGFLD-TIPRSIDEAATIDG 179
++ + + N+WG+ ++Y+ + +++ G++ ++P S+DEAA IDG
Sbjct: 118 PFQVIMIPITVMMSKLGLANMWGLIILYLTYAIPQTLFLYVGYIKLSVPDSLDEAAEIDG 177
Query: 180 ATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTV---AYGLQN 236
A + T+ I P+ +PM T ++ + W DFM IL D + T+ Y
Sbjct: 178 ADKLTTYRKIIFPMLKPMHATTLIINALWFWNDFMLPLLIL-NKDSSMWTLPLFQYNYSG 236
Query: 237 MMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
N G S A ++ + ITI++++ QK + G++ GA K
Sbjct: 237 QYFNDYGPS-------FASYIVGIITITIVYLIFQKHIIAGMSNGAVK 277
sp|P47435|Y189_MYCGE PROBABLE ABC TRANSPORTER PERMEASE PROTEIN MG189
Length = 318
Score = 73.4 bits (177), Expect = 2e-12
Identities = 61/279 (21%), Positives = 118/279 (41%), Gaps = 13/279 (4%)
Query: 10 LSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQS--LFPQNWTLENYIGIFNNS 67
L+L F+ IFP M++ SFA + ++ L+P +W +N+ + ++
Sbjct: 34 LTLVFKTLVLGFFGLIVIFPFYLMVVVSFASDERALDTRTPILWPDSWNFDNFSRVLSDG 93
Query: 68 QYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXX 127
+Y A ++NT + V+ + F T M Y+ S ++K++K F L
Sbjct: 94 KYLNAI-VVNTLV-TVLSVLLTLFFTICMGYSFSLRKWKYKKLVWFFFLSVLILPESALL 151
Query: 128 XXXYSILKSINMLN------IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGAT 181
Y I+ N N + G+ + +V GF +++ + IP + E+A IDG
Sbjct: 152 IGQYRIVIVANWNNPNSPLIVLGLIMPFVSSVFSGF-MYRTSFEAIPSQLKESALIDGCN 210
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGG-DPKIRTVAYGLQNMMTN 240
+ F+ I LP+ + ++ W +++ +LG D I + N
Sbjct: 211 GFNYFLKIALPMVKSTSWTVGILTAFSAWNSYLWPLLLLGNRVDLNINLWVLQQGILDAN 270
Query: 241 SKGSSATNLYQF-IAGSVLIAVPITILFIVMQKFYVNGI 278
S L ++ ++L +P+ I++ + K +N I
Sbjct: 271 SSDEQIRTLLNLKMSAAILAILPMFIIYFLFHKRIMNAI 309
pir||I64220 membrane protein homolog - Mycoplasma genitalium (SGC3) >gi|3844786
(U39698) ABC transporter, permease protein [Mycoplasma
genitalium]
Length = 334
Score = 73.4 bits (177), Expect = 2e-12
Identities = 61/279 (21%), Positives = 118/279 (41%), Gaps = 13/279 (4%)
Query: 10 LSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQS--LFPQNWTLENYIGIFNNS 67
L+L F+ IFP M++ SFA + ++ L+P +W +N+ + ++
Sbjct: 50 LTLVFKTLVLGFFGLIVIFPFYLMVVVSFASDERALDTRTPILWPDSWNFDNFSRVLSDG 109
Query: 68 QYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXX 127
+Y A ++NT + V+ + F T M Y+ S ++K++K F L
Sbjct: 110 KYLNAI-VVNTLV-TVLSVLLTLFFTICMGYSFSLRKWKYKKLVWFFFLSVLILPESALL 167
Query: 128 XXXYSILKSINMLN------IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGAT 181
Y I+ N N + G+ + +V GF +++ + IP + E+A IDG
Sbjct: 168 IGQYRIVIVANWNNPNSPLIVLGLIMPFVSSVFSGF-MYRTSFEAIPSQLKESALIDGCN 226
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGG-DPKIRTVAYGLQNMMTN 240
+ F+ I LP+ + ++ W +++ +LG D I + N
Sbjct: 227 GFNYFLKIALPMVKSTSWTVGILTAFSAWNSYLWPLLLLGNRVDLNINLWVLQQGILDAN 286
Query: 241 SKGSSATNLYQF-IAGSVLIAVPITILFIVMQKFYVNGI 278
S L ++ ++L +P+ I++ + K +N I
Sbjct: 287 SSDEQIRTLLNLKMSAAILAILPMFIIYFLFHKRIMNAI 325
dbj|BAA29273.1| (AP000001) 289aa long hypothetical maltose transport system
permease protein [Pyrococcus horikoshii]
Length = 289
Score = 72.6 bits (175), Expect = 4e-12
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 27/265 (10%)
Query: 33 MILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNS-------QYPYAHWLLNTFILAVIC 85
++L+SF+ T F F + TLEN+I +F + LNT I+A+
Sbjct: 33 LMLSSFSTTMITNFDFKDF--HVTLENWINVFRGKLAITGGVRVNMGKIFLNTLIVALGV 90
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILK-----SINML 140
+ T I+ + YALSR+ FK RK + + Y + + +++
Sbjct: 91 SGLVTIISVMSGYALSRMDFKGRKLMITSLMLLHAFPGVALIVGVYLLYRISFPGEQSLV 150
Query: 141 NIWGMALVYVGGSGL----GFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRP 196
++ V + L ++ KGF D IP + + IDGA+R + I LPL +P
Sbjct: 151 RLYSFIYVIFARAALEVPMSVWLMKGFFDNIPWEFEWSGIIDGASRITVWRKIMLPLIKP 210
Query: 197 MIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGS 256
I+ +L +F+ W D ++ L + L + + + T++ A
Sbjct: 211 GILAVALFSFLAGWQDIIYVRTFL---------IDQTLATFIEANIEAEYTHMPMIAAAG 261
Query: 257 VLIAVPITILFIVMQKFYVNGITAG 281
L +P I F+ Q+ + G + G
Sbjct: 262 TLYLLPTIIFFLTAQQLLLRGYSGG 286
sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5'REGION (ORF2)
>gi|632073|pir||S41786 probable sugar transport protein
2 - thermophilic bacterium RT8.B4 >gi|311187 (L18965)
putative membrane bound sugar transport protein; ORF2
[thermophilic bacterium RT8.B4]
Length = 275
Score = 72.2 bits (174), Expect = 5e-12
Identities = 62/261 (23%), Positives = 115/261 (43%), Gaps = 14/261 (5%)
Query: 29 PVIWMILTSFAKNNN--TGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
P ++M+ TSF + +G + P+ T+ N+ + + + Y L N+ I I
Sbjct: 25 PFLFMLFTSFKTQSELLSGNTWQI-PRQPTIGNFSTVLEGNFFTY---LKNSVIAVSISV 80
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN-IWGM 145
V I+++ ++A SR +F + Y + I + + ++ +
Sbjct: 81 VLILIISSMAAFAFSRFKFALNNLLYSLIIAGMAIPIHVTLIPIYVLTNKIKLYDTVFAL 140
Query: 146 ALVYVGGS-GLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
YV S + ++ F+ IP ++EAA IDG + ++ + I LPLS P ++ +
Sbjct: 141 IGPYVALSLPMSIFILTEFMREIPLELEEAAKIDGCSMFRLYSDILLPLSAPALITVGIY 200
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPIT 264
W +F+F+ + P RT+ G+ + GS + F+ S+L P+
Sbjct: 201 NGTYLWNEFVFALVLT--SSPTRRTLPLGIWDFQAR-YGSDIPAIMAFLTLSLL---PML 254
Query: 265 ILFIVMQKFYVNGITAGADKG 285
I +I Q + G+ AGA KG
Sbjct: 255 IAYIFGQDKIIKGMMAGAVKG 275
gi|2645414 (AF005383) putative transport protein [Caldicellulosiruptor
saccharolyticus]
Length = 339
Score = 71.4 bits (172), Expect = 9e-12
Identities = 63/303 (20%), Positives = 123/303 (39%), Gaps = 38/303 (12%)
Query: 10 LSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLF--PQNWTLENYIGIFNNS 67
L F Y ++P++++I + + F S+ P++ T N+ + N
Sbjct: 34 LKKVFLYAFVICMSYILLYPILFLISNALRSKEDL-FDPSVIWIPKHITFSNFE--YANV 90
Query: 68 QYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXX 127
Y + NT ++ + + TFI+ ++ Y +R RF R+ L
Sbjct: 91 LLSYPTAIKNTLLMLIPSVIIQTFISMMVGYGFARFRFAEREILFTILLFTIVVPLQTII 150
Query: 128 XXXYSILKSINMLNIWGMALVYVGG-------------------------SGLGFYVFKG 162
Y + + L I G L ++ G S L +VF+
Sbjct: 151 VPLYVKFRYFDFLYI-GKLLGFITGKPLTVNLLDTPWPFYILNLFGMGIRSSLYIFVFRQ 209
Query: 163 FLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGG 222
F +P ++EAA IDG + TFI I +P + I+ L + + W D+ S+
Sbjct: 210 FFRNMPVELEEAAKIDGCGPFSTFIRIMVPNATGAIITVMLFSIVWHWNDYYVSAMFYNE 269
Query: 223 GDP--KIRTVAYGLQNMMTNSKGSSATNLY-----QFIAGSVLIAVPITILFIVMQKFYV 275
P + TV +M+ ++ S+ ++Y AG +++ +P+ +++I+ Q+++
Sbjct: 270 NLPISVMLTVLNNRMSMIQDAYNFSSEDIYLMGSTVLEAGCLMVILPLIVIYIIGQRYFT 329
Query: 276 NGI 278
I
Sbjct: 330 ESI 332
emb|CAB52982.1| (AL109950) putative integral membrane permease [Streptomyces
coelicolor A3(2)]
Length = 273
Score = 71.0 bits (171), Expect = 1e-11
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 144 GMALVYVG-GSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
G+ L+Y F+V + + T+PR + EAA +DGA+ W+ F I +PL+R ++
Sbjct: 139 GLVLIYTAIAVPFAFFVMRNYALTLPREVVEAARMDGASWWRVFWQIHVPLTRSAMIAVF 198
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
+ F+ W D MF ++ + IR V L ++ N + +AG++L+++P
Sbjct: 199 VFQFVAVWNDLMFGITMVTSRN--IRPVMAALADLQGNYSNVGPPIV---LAGALLVSLP 253
Query: 263 ITILFIVMQKFYVNGI 278
+LF Q+F+V+ +
Sbjct: 254 TVVLFFSAQRFFVSSL 269
emb|CAB46344.1| (AJ009797) CEBG protein [Streptomyces reticuli]
Length = 276
Score = 71.0 bits (171), Expect = 1e-11
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Query: 75 LLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSIL 134
+LN+ I+A V+ +T+ +A ++LRF+F L + Y +
Sbjct: 72 MLNSVIVAGTITVSTVLFSTLAGFAFAKLRFRFSGLLLLLTIGTMMIPPQLAVVPLYLWM 131
Query: 135 KSINMLNIWGMALVYVGGSGLGFYVFKGFL-DTIPRSIDEAATIDGATRWQTFIHITLPL 193
+ N ++ + G + + +L +P + EAA +DGA+ + H+ P
Sbjct: 132 SDLGWSNQLHTVILPSLVTAFGTFFMRQYLVQALPTELIEAARVDGASSLRIVWHVVFPA 191
Query: 194 SRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFI 253
+RP + L+ F+ W DF++ L +P TV G + A +
Sbjct: 192 ARPAMAVLGLLTFVFAWNDFLWPIIALNQQNP---TVQVGPELARHRVLPDQAV----IM 244
Query: 254 AGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
AG++L +P+ + F++ K V GI GA KG
Sbjct: 245 AGALLGTLPLLVAFLLFGKQIVGGIMQGAIKG 276
sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OR >gi|2182562
(AE000089) Y4oR [Rhizobium sp. NGR234]
Length = 277
Score = 70.2 bits (169), Expect = 2e-11
Identities = 53/261 (20%), Positives = 110/261 (41%), Gaps = 12/261 (4%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
++FP WM+LT F +T + F TL + +F + + +++N+ ++ ++
Sbjct: 27 YLFPYTWMVLTGFRHGVDTISMPPRFIFEPTLAGFKHLFEVTGFQ--KYIINSAVVTIVS 84
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
V ++ +YAL+ + K L L Y + ++ L+ +
Sbjct: 85 VVLVIAVSAPAAYALAHVT-KRGGTLLVAILVARIIPGIAIGVPVYLLATRLHQLDTYQA 143
Query: 146 ALVYVGGSGLGF--YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
++ + F ++ + F + ++ EAA DG + WQ F I +PL ++ T++
Sbjct: 144 LIIINVAVNIPFAIWLMRSFFMEVHPTLREAAISDGCSEWQVFTKIMMPLVLGGMLATAV 203
Query: 204 MAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPI 263
FI W +F+F+ + P G + + A + L++ P+
Sbjct: 204 FVFIAVWNEFLFALILTTSVSPTAPLAMLGFRTQYGVQWDAVG-------AAAFLVSTPV 256
Query: 264 TILFIVMQKFYVNGITAGADK 284
+MQ++ V G+T G+ K
Sbjct: 257 IAFAFIMQRYLVQGLTMGSVK 277
dbj|BAA81264.1| (AP000064) 303aa long hypothetical maltose transport system
permease protein [Aeropyrum pernix]
Length = 303
Score = 69.5 bits (167), Expect = 3e-11
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 33 MILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYA---------HWLLNTFILAV 83
+IL+SF+ N T + + F TL+N+I +F Q YA L T +AV
Sbjct: 41 LILSSFSTNMVTDPLLTDFQP--TLDNWI-MFLRGQITYATGGLERNVVEMTLVTLTVAV 97
Query: 84 ICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSI-NMLNI 142
A+ T ++ + +Y++SR+ FK R F + Y I + I ++L +
Sbjct: 98 GVALTATLVSLLAAYSISRMEFKGRGVFTAGLIMLHAFPGVALIIGVYMIFRIIGDVLGV 157
Query: 143 WG-----MALVYVGGSGL----GFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPL 193
G +A + + + L ++FKGF D IP ++ +A +DGA+R + + I +PL
Sbjct: 158 LGEEFYAIAYIILARAALEVPMAIWLFKGFFDKIPWELEWSALVDGASRVRVWWSILVPL 217
Query: 194 SRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMT-NSKGSSATNLYQ- 251
+P I + F+ W +F++ L +G+ ++ T + +A YQ
Sbjct: 218 VKPGIAAVLIFTFLAGWEEFIYFYVFL---------KPFGIDSLPTFIEEIVAAAENYQL 268
Query: 252 --FIAGSVLIAVPITILFIVMQKFYVNGITAG 281
A +P + F++ Q+ + + G
Sbjct: 269 TIIAAAGTFYLLPTIVFFVLTQRLLLEAYSGG 300
emb|CAA21406| (AL031866) ORF81, len=275 aa, highly similar to Pseudomonas
fluorescens MtlG (mtlG), 39.5% identity in 258 aa
overlap, Fasta scores: opt: 689,E():0, also similar to
E. coli MalG protein 35.3% identity in 266 aa overlap,
Fasta s...
Length = 275
Score = 69.5 bits (167), Expect = 3e-11
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 24/267 (8%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNW---TLENYIGIFNNSQYPYAHWLLNTFILA 82
++ P+ W++ SF K F P+ W L+NY + N + + F +
Sbjct: 25 FLLPIYWLVTMSF-KTYIDAFAMP--PKLWFTPILDNYRQVLGNGDF------IRAFGNS 75
Query: 83 VICAVANTFITTIMS--YALSRLRFKFRKPFL-QFALXXXXXXXXXXXXXXYSILKSINM 139
++ ++ +TF+ I+ +A + F RK QF + Y ++ + M
Sbjct: 76 LLISLVSTFLCLILGALFAYGLVFFIERKGRAKQFIMSLRYAPVIMLVIPVYYLITKLGM 135
Query: 140 L-NIWGMALVY-VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPM 197
N + LVY V + F + IP I EAA +DGA+ W+ F+ + LPL+R
Sbjct: 136 TDNYLVLILVYTVANVPFTILMVTTFFEDIPPEIREAARVDGASEWRVFLSVMLPLARTG 195
Query: 198 IVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSV 257
+ + ++ W +F +L +T+ + + +T T A
Sbjct: 196 LAASGVLTLFFIWNEFQI---VLTLSGDSTQTLPVAITSFLT----FQGTEWGPLTAAGT 248
Query: 258 LIAVPITILFIVMQKFYVNGITAGADK 284
L+ +P+ +L +++QK V G+T G K
Sbjct: 249 LVMLPMLVLGLLVQKHLVRGLTMGGVK 275
emb|CAA11785.1| (AJ223998) PCZA361.28 [Amycolatopsis orientalis]
Length = 132
Score = 69.1 bits (166), Expect = 4e-11
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 158 YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSS 217
++ + + +PR +DEAA +DG + + LP P +V L AF+ W +F+
Sbjct: 9 FMMRNSFEAVPRELDEAALVDGCGPLRVLWSVLLPAVVPGMVTVGLFAFLASWNEFIAPL 68
Query: 218 YILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNG 277
L GD T+ L M + + G+ Q AG V+ A+P ILF+++Q+ YV G
Sbjct: 69 IFLSDGDK--FTLPTALAAMRSGNFGAIDYGALQ--AGIVVSAIPCMILFMLLQRHYVRG 124
Query: 278 ITAGADKG 285
++GA KG
Sbjct: 125 FSSGALKG 132
gi|1277032 (U51868) unknown [Bacillus subtilis]
Length = 260
Score = 68.3 bits (164), Expect = 8e-11
Identities = 51/189 (26%), Positives = 87/189 (45%), Gaps = 5/189 (2%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQS-LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
+ P I +I SFA + L P ++L+ Y IF+ + Y L++ F+ +
Sbjct: 29 VLPFIHVIAASFATVEEVVSKKFILIPTTFSLDAYRYIFS-TDIIYKSLLVSVFVTVIGT 87
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM 145
AV+ F++++M+Y LSR R+P + L + ++KS+ +L+ +
Sbjct: 88 AVS-MFLSSLMAYGLSRRDLIGRQPLM--FLVVFTMLFSGGMIPTFLVVKSLGLLDSYWA 144
Query: 146 ALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMA 205
++ + + K F IP S++E+A IDG F I LPLS P I SL
Sbjct: 145 LILPTAINAFNLIILKNFFQNIPSSLEESAKIDGCNDLGIFFKIVLPLSLPAIATISLFY 204
Query: 206 FIGPWLDFM 214
+ W +M
Sbjct: 205 AVTYWNTYM 213
emb|CAB56685.1| (AL121596) putative binding-protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 275
Score = 67.5 bits (162), Expect = 1e-10
Identities = 40/130 (30%), Positives = 68/130 (51%), Gaps = 5/130 (3%)
Query: 155 LGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM 214
L + F+ TIP ++EAA +DGA+ + H+ P+ P I L+ F+ W +++
Sbjct: 150 LSVVILVQFMRTIPPEMEEAARLDGASTFAVLRHVYTPMCLPGIATVLLLNFLTFWNEYL 209
Query: 215 FSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFY 274
+S I+ G DP RTV L + K + T+ AG+VL VP+ +++ ++QK
Sbjct: 210 YSLVII-GPDPAQRTVQVALPTL----KSITGTDYGVLTAGTVLTLVPVWLVYTLLQKRM 264
Query: 275 VNGITAGADK 284
+ +GA K
Sbjct: 265 QQALVSGAVK 274
gb|AAD36916.1|AE001822_9 (AE001822) sugar ABC transporter, permease protein [Thermotoga
maritima]
Length = 290
Score = 66.7 bits (160), Expect = 2e-10
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNW--TLENYI--GIFNNSQYPYAHWLLNTFIL 81
W +P +WM++ +F++ G + + QN+ E+ I +F N+ ++++ FI
Sbjct: 26 WGYPFVWMLILAFSRWKFVGSPKFVGLQNFFRIFEDKIFWRVFLNTMNFLSYFIPMVFIA 85
Query: 82 AVICAVA-------NTFITT--IMSYALSRLRFK--FRKPFLQFALXXXXXXXXXXXXXX 130
+++ A+A TF+T +++Y S + + F++ F +
Sbjct: 86 SILFAIALNRMKYFKTFVTLSFLVAYVSSGVAYSIMFQRIFSETGPINRFLYNAFGITIP 145
Query: 131 YSILKSINMLNIWGMAL-VYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHI 189
+ + ML I M +VG GL Y L IP+SI EAA +DGAT W F I
Sbjct: 146 WFTDPQLAMLTIAIMVTWKFVGYYGLILY---SGLQAIPKSIFEAAELDGATSWVKFWKI 202
Query: 190 TLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGL 234
TLPL P IV T L+ + Y++ GG P RT+ + L
Sbjct: 203 TLPLLNPAIV-TVLILAVNLSFGIFTEPYMITGGGPMNRTLTFML 246
pir||B27626 hypothetical protein 1 - Streptococcus mutans (fragment)
Length = 207
Score = 66.7 bits (160), Expect = 2e-10
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 133 ILKSINMLNIWGMALVYVGGS-GLGFYVFKGFLD-TIPRSIDEAATIDGATRWQTFIHIT 190
++ + + N+WG+ ++Y+ + +++ G++ ++P S+DEAA IDGA + T+ IT
Sbjct: 59 MMSKLGLANMWGLIILYLTYAIPQTLFLYVGYIKLSVPDSLDEAAEIDGADKLTTYRKIT 118
Query: 191 LPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTV---AYGLQNMMTNSKGSSAT 247
P+ +PM T ++ + W DFM IL D + T+ Y N G S
Sbjct: 119 FPMLKPMHATTLIINALWFWNDFMLPLLIL-NKDSSMWTLPLFQYNYSGQYFNDYGPS-- 175
Query: 248 NLYQFIAGSVLIAVPITILFIVMQKFYVNGITAGADK 284
A ++ + ITI++++ QK + G++ GA K
Sbjct: 176 -----FASYIVGIITITIVYLIFQKHIIAGMSNGAVK 207
sp|P75262|Y189_MYCPN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN MG189 HOMOLOG
>gi|2146653|pir||S73344 sn-glycerol-3-phosphate
transport system permease ugpE - Mycoplasma pneumoniae
(SGC3) (ATCC 29342) >gi|1673665 (AE000003) Mycoplasma
pneumoniae, sn-glycerol-3-phosphate transport system
permease protein; similar to Swiss-Prot Accession Number
P10906, from E. coli [Mycoplasma pneumoniae]
Length = 319
Score = 62.8 bits (150), Expect = 3e-09
Identities = 54/268 (20%), Positives = 109/268 (40%), Gaps = 14/268 (5%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQS--LFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVI 84
IFP M++ + + ++ L W EN+ + + +Y A W+ + ++ ++
Sbjct: 51 IFPFYLMLVVALTSDEVVLNIREPILKSDGWHFENFRRVLEDGKYLNAIWINS--LVTIL 108
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN--- 141
+ F T M YA S ++K +K F L Y ++ N
Sbjct: 109 SIILRLFFTVSMGYAFSLKKWKLKKLFWFIFLAVLILPESALLIGQYRVVVVANWNQPEK 168
Query: 142 ---IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMI 198
I G+ + +V GF +F+ + IP I E+A +DG T + F+ I P+ R
Sbjct: 169 PAIILGLTMPFVASVFSGF-MFRTAFEAIPPRIKESAFVDGCTGLRYFLKIAFPMVRSTT 227
Query: 199 VYTSLMAFIGPWLDFMFSSYILGGG---DPKIRTVAYGLQNMMTNSKGSSATNLYQFIAG 255
S++ W +++ +L + + +A G S L +A
Sbjct: 228 WTVSILTAFAAWNSYLWPLLLLTNRPDLNINLWVLAQGTDGNAGQSDEQIRVLLNLKMAA 287
Query: 256 SVLIAVPITILFIVMQKFYVNGITAGAD 283
++L +P+ I++ + +K + + + A+
Sbjct: 288 AILAILPMFIVYFLFRKRIMKAVGSRAN 315
dbj|BAA28360| (D85027) integral membrane protein [Thermus sp. A4]
Length = 282
Score = 60.9 bits (145), Expect = 1e-08
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 35/233 (15%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPY-AHWLLNTFILAVI 84
W +P+++ SF ++P W LE + Q P+ A L NT + +
Sbjct: 21 WAWPIVYSFYLSFVNTR-------VYP--WRLEPALNWGRLLQDPFFAVALKNTLFILAV 71
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSIN------ 138
+ +++ AL+ +F K F +FA + +L +
Sbjct: 72 QVPLMLALALLLALALNSALLRF-KGFYRFAFFAPVVVGAVAYSAVFRLLFNTEFGAVNA 130
Query: 139 MLNIWG-------------MALVYVG----GSGLGFYVFKGFLDTIPRSIDEAATIDGAT 181
+L G MA++ V +G + L IP+ + EAA IDGA
Sbjct: 131 LLRALGHPGYDWLYAPGPAMAVIIVALTWRWTGYNAIILLAGLQNIPKELYEAAAIDGAG 190
Query: 182 RWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGL 234
WQ F H+TLP RP++++ +++ IG L +++ GG P T+ GL
Sbjct: 191 PWQQFRHVTLPGIRPVLLFCLVLSIIGT-LQLFTEPFLITGGGPGNATMTLGL 242
gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira hyodysenteriae]
Length = 277
Score = 60.9 bits (145), Expect = 1e-08
Identities = 65/272 (23%), Positives = 112/272 (40%), Gaps = 47/272 (17%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
++P+ + ++SF K+ TG WTL+N++ F+ Y A L+N+F + +
Sbjct: 26 VYPLFSLFISSF-KDPETGA--------WTLDNFLRFFSRKYYYQA--LVNSFSVTICVT 74
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMA 146
+ I T M+Y +S + K K FL+ + + +L L G+
Sbjct: 75 ILAIVIGTPMAYFMSVYKIK-GKTFLEILIIISMMSPAFIGAYSWILL-----LGRSGVV 128
Query: 147 LVYVGGSGLG----------------------FYVFKGFLDTIPRSIDEAATIDGATRWQ 184
+ G G+ F G L I S+ EAA G + ++
Sbjct: 129 TKFFAGFGISTPTIYGFGGILLVFTLKLYPFIFMYVSGALSKIDVSLMEAAESLGCSPFK 188
Query: 185 TFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGS 244
+ I +PL P I+ SL+ F+ DF + ++G G RT+ + + + G
Sbjct: 189 KVVTIAMPLITPTILAGSLLVFMNALADF-GTPMLIGEG---YRTMPTMIYSEFVSEVGG 244
Query: 245 SATNLYQFIAGSVLIAVPITILFIVMQKFYVN 276
+A F A I V IT + + QK++VN
Sbjct: 245 NA----NFSASMASIMVFITAMMFIAQKYFVN 272
gi|3128352 (AF010496) transmembrane maltose transport protein [Rhodobacter
capsulatus]
Length = 276
Score = 60.5 bits (144), Expect = 2e-08
Identities = 60/262 (22%), Positives = 107/262 (39%), Gaps = 16/262 (6%)
Query: 28 FPVIWMILTSFAKNNNT-GFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICA 86
FP++W ++ SF + + +TLE+Y + S Y W N+ ++++
Sbjct: 26 FPILWTVILSFKTEGDAIAAPLKVLTSPFTLESYGVVQERSNYFLHFW--NSVVISLGST 83
Query: 87 VANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN--IWG 144
+ + ++A++ + K L + L Y I + + +L+ I
Sbjct: 84 LLALLVAIPAAWAMAFVPGPKTKDLLMWMLSTKMMPAVGVLVPIYLIFRDLGLLDSRIGL 143
Query: 145 MALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLM 204
+ ++ + + ++ + IP I EAA +DGAT IH+ P++ P I T L+
Sbjct: 144 VVVLMLMNLPIVIWMLYTYFREIPGEILEAARMDGATLKDELIHVLTPMAVPGIASTLLL 203
Query: 205 AFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLY--QFIAGSVLIAVP 262
I W + ++ + + T G SS L+ + A S L P
Sbjct: 204 NVILAWNEAFWTLQLTTSKAAPLTTFIAGY---------SSPEGLFYAKLSAASTLAIAP 254
Query: 263 ITILFIVMQKFYVNGITAGADK 284
I IL QK V G+T GA K
Sbjct: 255 ILILGWFSQKQLVRGLTFGAVK 276
gi|2338761 (AF018073) sorbitol/mannitol transport inner membrane protein; SmoG
[Rhodobacter sphaeroides]
Length = 276
Score = 60.5 bits (144), Expect = 2e-08
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 16/262 (6%)
Query: 28 FPVIWMILTSFAKNNNTGFVQSLFPQ---NWTLENYIGIFNNSQYPYAHWLLNTFILAVI 84
FP++W +L SF + +++ F +WTL++Y + S Y A +N+ ++++
Sbjct: 26 FPILWTVLMSFKSEGDA--IKAPFAMLFSDWTLQSYADVQERSNY--ARHFMNSVVISLG 81
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW- 143
+ I ++A++ + + K L + L Y I + +L+
Sbjct: 82 STLVALAIAIPAAWAMAFVPGRRTKDVLMWMLSTKMMPAVGVLIPLYLIFRDTGLLDTRI 141
Query: 144 GMALVY-VGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
G+ +V + + ++ + IP I EAA +DGAT ++I P++ P I T
Sbjct: 142 GLVIVLTLINLPIVVWMLYTYFKEIPGEILEAARMDGATLGSEILYILTPMAVPGIASTL 201
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
L+ I W + ++ + + A L + + + A S + P
Sbjct: 202 LLNVILAWNEAFWTLQL-------TTSRAAPLTQFIASYSSPEGLFYAKLSAASTMAIAP 254
Query: 263 ITILFIVMQKFYVNGITAGADK 284
I IL QK V G+T GA K
Sbjct: 255 ILILGWFSQKQLVRGLTFGAVK 276
emb|CAA91218| (Z56279) integral membrane protein [Thermoanaerobacter brockii]
Length = 280
Score = 60.5 bits (144), Expect = 2e-08
Identities = 50/212 (23%), Positives = 94/212 (43%), Gaps = 9/212 (4%)
Query: 76 LNTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQ-FALXXXXXXXXXXXXXXYSIL 134
LN+ I++V + + + +YA+ FK++K L Y +
Sbjct: 74 LNSLIISVPVTFLTVYFSMMTAYAIHVYDFKWKKMLYNTVVLLTIVPTQLVPIIGFYKYM 133
Query: 135 KSINMLNIWGMALV-YVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPL 193
S+ +LN + +V + + F+ + TI + + EAA I+G+ F I LP+
Sbjct: 134 ASLKLLNSYIPLIVPAIASPPMVFFALQYLESTIVKDLIEAARIEGSGELGIFHKIILPI 193
Query: 194 SRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFI 253
++P +++F+ W +F F+ ++L K Y L ++ +G Y I
Sbjct: 194 AKPGAFTMGILSFVASWNNF-FTPFMLISKIEK-----YTLPMIVKLLRGDMYRTEYGAI 247
Query: 254 -AGSVLIAVPITILFIVMQKFYVNGITAGADK 284
G + +PI I++ + K+ V+GI GA K
Sbjct: 248 YLGLAITMIPIIIVYAIFSKYIVSGIAMGAIK 279
gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane protein [Thermus brockianus]
Length = 280
Score = 57.8 bits (137), Expect = 1e-07
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 32/231 (13%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
W +P+ + + SF ++P W LE + Q P+ L + ++
Sbjct: 20 WAWPIAYSLYLSFLNTR-------VYP--WRLEVGVNWGRLLQDPFFWTALKNTLFILLV 70
Query: 86 AVANTFITTIMSYALSR--------LRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSI 137
V +++ AL+ RF F P + A+ ++ +
Sbjct: 71 QVPLMLALALLALALNSALLRAKGFFRFAFFAPVVVGAVAYSAVFRLLFNTEFGAVNALL 130
Query: 138 NMLNIWGMALVYVGG--------------SGLGFYVFKGFLDTIPRSIDEAATIDGATRW 183
L G +Y G +G + L +IP+ + EAA +DGA W
Sbjct: 131 RTLGHPGYDWLYAPGPAMAVIIIALTWRWTGYNAIILLAGLQSIPKELYEAAALDGAGPW 190
Query: 184 QTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGL 234
Q F H+TLP RP++++ +++ IG L +++ GG P T+ G+
Sbjct: 191 QRFWHVTLPGIRPVLLFALILSIIGT-LQLFTEPFLITGGGPGNATMTLGV 240
emb|CAB55649.1| (AL117385) putative sugar ABC-transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 148
Score = 57.4 bits (136), Expect = 1e-07
Identities = 33/127 (25%), Positives = 61/127 (47%), Gaps = 6/127 (4%)
Query: 155 LGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM 214
L V F+ +P+ + ++ +DGAT W T + PL+RP I+ ++ + W F+
Sbjct: 25 LSVLVLANFVRDVPKELFDSMRVDGATEWTTMWRLAAPLTRPAILTVTIFNALTIWNGFL 84
Query: 215 FSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFY 274
+ P+ RT+ L +G N+ +A VL +P+ IL+ ++
Sbjct: 85 LPLVLT--QSPERRTLPLALWTF----QGQYGVNVPAVLAAVVLTTLPVLILYAFGRRQL 138
Query: 275 VNGITAG 281
++G+TAG
Sbjct: 139 LSGLTAG 145
dbj|BAA29091.1| (AP000001) 277aa long hypothetical sugar transport membrane protein
[Pyrococcus horikoshii]
Length = 277
Score = 56.6 bits (134), Expect = 3e-07
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 23/263 (8%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHW--LLNTFILAVI 84
+ P+I L +F+ + + + P ++T E I Y W + N+ I+A +
Sbjct: 26 VIPIIVSALYAFSTKTDYYDPRKVIPTSFTDEWVKTIL----YVLGAWDGIKNSVIVATL 81
Query: 85 CAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXX----XXXXXXXXYSILKSINML 140
+ + + YA++R FK K ++ ++ Y LK I+ L
Sbjct: 82 TIIISFILGIPAGYAIARFAFK-GKDTIKLSIVALRMFPIPVMAIPLVVLYIKLKLIDTL 140
Query: 141 NIWGMALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMI 198
+G+AL + L F V + + ++EA + G TRW F +ITLPL+ P +
Sbjct: 141 --FGVALAHTA-MALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFRNITLPLALPGL 197
Query: 199 VYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVL 258
++ F+ W + +S + K RT+ + +++ + G +A Y+F A + +
Sbjct: 198 AAAAMFTFVMSWNEVFVASIL----TLKNRTLPAQILSIVAGAAGGAAPAYYKF-AAAFI 252
Query: 259 IAVPITILFIVMQKFYVN--GIT 279
+ +P + +++ V GIT
Sbjct: 253 MTLPAMLFIFFARRYLVTMWGIT 275
emb|CAB48948.1| (AJ248283) SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 277
Score = 55.4 bits (131), Expect = 6e-07
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 77 NTFILAVICAVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKS 136
N+ I+AV+ + + + YA++R FK + + +
Sbjct: 74 NSIIVAVLTIIISFLLGIPAGYAIARYVFKGKDTIKLSIVALRMFPIPVMAIPLVVLYIK 133
Query: 137 INMLN-IWGMALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPL 193
+N+++ + G+AL + L F V + + ++EA + G TRW F ITLPL
Sbjct: 134 LNLIDTLLGVALAHTA-MALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFKSITLPL 192
Query: 194 SRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFI 253
+ P + ++ F+ W + +S + K RT+ + +++ + G +A Y+F
Sbjct: 193 ALPGLAAAAMFTFVMSWNEVFVASIL----TLKNRTLPAQILSIVAGAAGGAAPAYYKFA 248
Query: 254 AGSVLIAVPITILFIVMQKFYVN--GIT 279
A ++I +P + +++ V GIT
Sbjct: 249 AAFIMI-LPAMLFIFFARRYLVTMWGIT 275
gb|AAC98127.1| (AF098273) integral membrane protein [Bacillus stearothermophilus]
Length = 296
Score = 54.7 bits (129), Expect = 1e-06
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 24/292 (8%)
Query: 9 KLSLTFRYXXXXXXXXXWIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIG-IFNNS 67
KL F Y + P+I ++ SF+ + + L+P ++TL+ + N
Sbjct: 12 KLFTVFNYTLLTIIAVLCLLPLIHILAVSFSGSAARPLMVGLWPVDFTLDAVMRKTIGNE 71
Query: 68 QYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPF----LQFALXXXXXXX 123
+ + W N+F + YAL K PF L +
Sbjct: 72 NFLRSLW--NSFCVLYW----EQSFPWESCYALPIRCPKATTPFAAGKLYMWIFVFTMLF 125
Query: 124 XXXXXXXYSILKSINMLN-IWGMALVYVGGSGLGFYVFKGFLDTIPRSIDEAATIDGATR 182
Y ++ + + + IW + L + + F ++P+S++EAA +DGA
Sbjct: 126 HGGLVPTYMVVTKLGLTDTIWALILPPAVSAFNLILLVNFFRTSVPKSLEEAALMDGANH 185
Query: 183 WQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNS- 241
+ F I LP+S P I SL + W + ++ D K ++ LQ ++
Sbjct: 186 FTIFWKIYLPISVPAIATISLFTMVFHWNSWF--DGLIYMSDVKHYPLSSFLQTIIVQQD 243
Query: 242 ------KGSSATNLYQFIAGSVLI---AVPITILFIVMQKFYVNGITAGADK 284
+ NL + + I A+P+ I++ +QKF+V GI GA+K
Sbjct: 244 FTKMSVDAETLKNLSERTVKAAQIFIAALPMLIVYPFVQKFFVKGIVLGAEK 295
emb|CAB01403| (Z77855) sugar-binding transport protein [Anaerocellum
thermophilum]
Length = 303
Score = 53.1 bits (125), Expect = 3e-06
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 98 YALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLN----IWGMALVYVGGS 153
Y L R FK+RK F F + +N+L+ I+ + L YV
Sbjct: 103 YILFRKDFKYRKFFTFFGFFTMLINAGLVPWY----IVCVNILHLKNTIYALILPYVMNM 158
Query: 154 GLGFYVFKGFLD-TIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLD 212
+F+ +L ++P SI E+A IDGA + TF I +PL +P + +L + I W D
Sbjct: 159 WY-VLIFRTYLSMSLPDSIIESAKIDGAGEFTTFFRIVIPLVKPGLATIALFSAITYWND 217
Query: 213 FMFSSYILGGGDPKIRTVAYGLQNMM----------------TNSKGSSATNL---YQFI 253
+ ++ Y LQ MM + G T+L +
Sbjct: 218 WWLPFMLID------TEKLYNLQYMMYRVQQKIQYLAEIAGKLGASGIVPTDLPTESARM 271
Query: 254 AGSVLIAVPITILFIVMQKFYVNGITAGADKG 285
A +VL PI + + Q+++V G+T GA KG
Sbjct: 272 AMAVLGMGPIVLAYPFFQRYFVKGLTIGAIKG 303
gi|3941371 (AF043654) BxlG [Streptomyces lividans]
Length = 272
Score = 51.9 bits (122), Expect = 6e-06
Identities = 47/233 (20%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 52 PQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFRKPF 111
P ++TL+N+ G F++ + + NT ++ + ++YA+ R R +
Sbjct: 47 PDSFTLDNFTGAFDSG---FGQYFFNTLVVTACVIGIVLLLVPPLAYAIVRSRGRATSAI 103
Query: 112 LQFALXXXXXXXXXXXXXXYSILKSINML-NIWGMALVYVGGS-GLGFYVFKGFLDTIPR 169
+ L + ++ + N+ G+ L + + G + I
Sbjct: 104 FRLFLLGLAIPAQAVIVPMFYLISEAGLYDNLLGVILPRAAFCLPMSALILSGSMRDISP 163
Query: 170 SIDEAATIDGATRWQTFIHITLPLSR----PMIVYTSLMAFIGPWLDFMFSSYILGGGDP 225
+ EA +DGA+ + F + +PLSR ++V+++L A W F+F +
Sbjct: 164 ELYEAMAMDGASLRRMFFQLVMPLSRGGLSTIVVFSALQA----WNGFLFPLVLTQSDFT 219
Query: 226 KIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGI 278
K+ V GL N T + ++ + VL VPI ++++ ++ V G+
Sbjct: 220 KV--VTLGLYNFQT----AHGIDIPGLLGAVVLSMVPILLVYLFARRALVQGL 266
gi|2648949 (AE000991) spermidine/putrescine ABC transporter, permease protein
(potC) [Archaeoglobus fulgidus]
Length = 242
Score = 51.9 bits (122), Expect = 6e-06
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 49 SLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRFKFR 108
S + +TL NY + + + A + N+ +A++ + + + T+ +YA R + F
Sbjct: 25 SFYDDGFTLRNYQALLEDREIVSAFF--NSIGVALLSTIISVILGTLAAYAFMRDQISFS 82
Query: 109 KPFLQFALXXXXXXXXXXXXXX---------YSILKSINMLNIWGMALVYVGGSGLGFYV 159
F + YS+L NI A V+V S G
Sbjct: 83 ALFYPPIIIPEITEAVSLLLFFIVLGFPLGFYSVLIGHTAFNI---AFVFVIVSARGA-- 137
Query: 160 FKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYI 219
+ R +EA+ I GA +QTF +TLPL P I+ SL+AF W +F+ + +
Sbjct: 138 ------NLRREFEEASYILGANEFQTFRKVTLPLLMPGIIAASLIAFTLSWDNFIKTVFT 191
Query: 220 LGGG 223
G G
Sbjct: 192 TGPG 195
gb|AAD36308.1|AE001779_10 (AE001779) sugar ABC transporter, permease protein, putative
[Thermotoga maritima]
Length = 265
Score = 50.4 bits (118), Expect = 2e-05
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 26 WIFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVIC 85
++ PV +++L S +++ +FP + TLE+ +F A L + +A+I
Sbjct: 18 FLTPVFFIVLASLTPSSDYYNPSRIFPSSLTLEHLYKLFVTLGGGKA--TLVSVQVALIS 75
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIW-G 144
+ + YAL+R F + L + N+ + G
Sbjct: 76 IGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMRFNLADTTLG 135
Query: 145 MALVYVGGSGLGFYVF--KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTS 202
+AL + L F V I +EA + G +R+Q FI ITLPL+ P + ++
Sbjct: 136 VALAHASMI-LPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPLALPGLAASA 194
Query: 203 LMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVP 262
+ AFI W + +F+S IL + RT+ + N ++ + ++F AG+++ AVP
Sbjct: 195 IFAFIMSWNE-VFASSILTLTN---RTLPAHILN-----TAMASPDYFKFAAGTIM-AVP 244
Query: 263 ITILFIVMQKFYVN--GIT 279
+ ++K+ V+ GIT
Sbjct: 245 AMVFIFFIRKYLVSMWGIT 263
gb|AAF11009.1|AE001988_5 (AE001988) ABC transporter, permease protein, MalFG family
[Deinococcus radiodurans]
Length = 327
Score = 50.0 bits (117), Expect = 2e-05
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 164 LDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM---FSSYIL 220
L TIP + EAA +DGA+ W F +TLPL P + L+A I LD + YI+
Sbjct: 218 LQTIPGDMYEAADVDGASAWTKFWRLTLPLLTPAL----LVALIFRTLDSLRVFDMPYIV 273
Query: 221 GGGDPKIRTVA-YGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGIT 279
G P+ T++ Y Q ++ NS QF GS ++V I ++ +V YV +
Sbjct: 274 KGNAPETMTMSIYARQELIANS---------QFGFGSA-VSVLIFLIIMVFTAIYVTSLR 323
Query: 280 AGAD 283
D
Sbjct: 324 VKFD 327
gb|AAD36278.1|AE001777_4 (AE001777) maltose ABC transporter, permease protein [Thermotoga
maritima]
Length = 577
Score = 47.6 bits (111), Expect = 1e-04
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 162 GFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILG 221
G L +IP + E A IDGA R++ F+HIT PL +I + +F + +F I G
Sbjct: 450 GALQSIPPELYEVAAIDGAGRFRRFVHITFPLLMTIIAPLLVSSFAFSFNNFTIIYLITG 509
Query: 222 GGDP-KIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQKFYVNGITA 280
GG P T G +++ + A Q A+ I I F+V +VN +
Sbjct: 510 GGPPIPNSTTPTGYTDILISYVYKLAFEGGQGQDFGFASAISILIFFLVGGISFVNFKLS 569
Query: 281 GA 282
GA
Sbjct: 570 GA 571
emb|CAA63862| (X94148) putative inner membrane protein [Bacillus licheniformis]
Length = 270
Score = 47.6 bits (111), Expect = 1e-04
Identities = 47/196 (23%), Positives = 87/196 (43%), Gaps = 14/196 (7%)
Query: 29 PVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVA 88
PV +IL++F+ + F S W + G+ ++S + + W+ + +L V+ +A
Sbjct: 32 PVFVIILSAFSPDEYPKFPPSGVSLRW----FAGVISSSGWMESIWV-SGMLLLVVTPLA 86
Query: 89 NTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMALV 148
+ T+ +YAL+RL F ++ F L S L + ML + G
Sbjct: 87 -VILGTVAAYALARLNFPGKQGIQAFILSPMMIPQIALGV---SFLYLLTMLGVNGTFAG 142
Query: 149 YVGGSGLGF--YVFKGF---LDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSL 203
G L YV + + + ++ A+ GA W TF H+TLPL +P I+ ++
Sbjct: 143 LAAGHILISLPYVLRTVGVSMANVDPKLELASMNLGAGPWYTFFHVTLPLIKPGIIAGAV 202
Query: 204 MAFIGPWLDFMFSSYI 219
A + + + S ++
Sbjct: 203 FAAVTSFGEVSISLFV 218
gi|3212179 (U32698) H. influenzae predicted coding region HI0129 [Haemophilus
influenzae Rd]
Length = 632
Score = 46.5 bits (108), Expect = 3e-04
Identities = 34/104 (32%), Positives = 48/104 (45%), Gaps = 19/104 (18%)
Query: 155 LGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM 214
+ F + G L ++ SI+EA+ A R+QTF I PL RP + + L+ FI DF
Sbjct: 238 ISFMILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFS 297
Query: 215 FSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVL 258
+ +LGG I AT +Y +IAGS L
Sbjct: 298 -NPLVLGGSFDVI------------------ATQIYFYIAGSQL 322
Score = 44.1 bits (102), Expect = 0.001
Identities = 42/170 (24%), Positives = 70/170 (40%), Gaps = 15/170 (8%)
Query: 51 FPQNW------TLENYIGIFNNSQYPYAHW--LLNTFILAVICAVANTFITTIMSYALSR 102
F NW TL+NY +F A W L+NT I A I A F +++Y + R
Sbjct: 400 FTVNWGVNYTLTLKNYAMLFGQGLSDGA-WPSLINTLIYAGIAAPLTAFFGLLIAYIVVR 458
Query: 103 LRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMALVYVGGS-----GLGF 157
F+ +K L+F Y + + L I G ++ + +G
Sbjct: 459 KDFQGKKS-LEFLTMLCFAVPGTVAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGM 517
Query: 158 YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFI 207
L + +S+DEA+ + W+T I LPL +P ++ + +F+
Sbjct: 518 RAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALVTSFV 567
emb|CAA15783| (AL009199) probable transmembrane transport protein [Streptomyces
coelicolor]
Length = 353
Score = 46.5 bits (108), Expect = 3e-04
Identities = 40/152 (26%), Positives = 67/152 (43%), Gaps = 16/152 (10%)
Query: 134 LKSINMLNIWGMALVYVGGSGLGFY--VFKGFLDTIPRSIDEAATIDGATRWQTFIHITL 191
+ ++ + +WG+ +GFY +F + +P + EAA IDGA R++T I ITL
Sbjct: 194 MPAVMFVIVWGL---------VGFYAVLFIAAIKGVPGELYEAAKIDGAGRFRTTISITL 244
Query: 192 PLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQ 251
P R + + I F++ ++ G P T+ + + N + Y
Sbjct: 245 PAIRDSVQTAYIYLGIAALDAFVYVQAMVPNGGPDNSTLT--ISQRLFNVAFAKQQFGYA 302
Query: 252 FIAGSVLIAVPITILFIVMQKFYVNGITAGAD 283
G VL AV + +V F VN +T G +
Sbjct: 303 TAMGVVLAAVTLVFAALV---FLVNRLTGGGE 331
pir||H64049 nitrogenase C (nifC) homolog - Haemophilus influenzae (strain Rd
KW20)
Length = 550
Score = 46.5 bits (108), Expect = 3e-04
Identities = 34/104 (32%), Positives = 48/104 (45%), Gaps = 19/104 (18%)
Query: 155 LGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWLDFM 214
+ F + G L ++ SI+EA+ A R+QTF I PL RP + + L+ FI DF
Sbjct: 156 ISFMILDGALKSVHPSIEEASYTLRANRYQTFYQIIFPLLRPALANSFLIVFIQSLADFS 215
Query: 215 FSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVL 258
+ +LGG I AT +Y +IAGS L
Sbjct: 216 -NPLVLGGSFDVI------------------ATQIYFYIAGSQL 240
Score = 44.1 bits (102), Expect = 0.001
Identities = 42/170 (24%), Positives = 70/170 (40%), Gaps = 15/170 (8%)
Query: 51 FPQNW------TLENYIGIFNNSQYPYAHW--LLNTFILAVICAVANTFITTIMSYALSR 102
F NW TL+NY +F A W L+NT I A I A F +++Y + R
Sbjct: 318 FTVNWGVNYTLTLKNYAMLFGQGLSDGA-WPSLINTLIYAGIAAPLTAFFGLLIAYIVVR 376
Query: 103 LRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGMALVYVGGS-----GLGF 157
F+ +K L+F Y + + L I G ++ + +G
Sbjct: 377 KDFQGKKS-LEFLTMLCFAVPGTVAGVSYILAFNNAPLYITGTGIIVIISMVMRDLPIGM 435
Query: 158 YVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFI 207
L + +S+DEA+ + W+T I LPL +P ++ + +F+
Sbjct: 436 RAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALVTSFV 485
sp|P77156|YDCU_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YDCU
>gi|1742350|dbj|BAA15071| (D90783) Putrescine transport
system permease protein PotH. [Escherichia coli]
>gi|1742357|dbj|BAA15077| (D90784) Putrescine transport
system permease protein PotH. [Escherichia coli]
>gi|1787713 (AE000241) putative transport system
permease protein [Escherichia coli]
Length = 313
Score = 45.7 bits (106), Expect = 5e-04
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 52/261 (19%)
Query: 46 FVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTFILAVICAVANTFITTIMSYALSRLRF 105
F S+ P+ TL N +FN + Y +L T +AV +A+ + M++ ++R
Sbjct: 62 FTMSVTPE-LTLANIRALFNPANYDI---ILRTLTMAVAVTIASAILAFPMAWYMARYTS 117
Query: 106 KFRKPFLQFALXXXXXXXXXXXXXXYSILKSINMLNIWGM-------------ALVYVGG 152
K F A+ +++L + + + W + L VGG
Sbjct: 118 GKMKAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGG 177
Query: 153 -----SGLG-FYVF------------KGFLDTIPRSIDEAATIDGATRWQTFIHITLPLS 194
SGLG F VF + L+ +P S+ +A+ GA QTF ++ LPL+
Sbjct: 178 NTLSTSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLA 237
Query: 195 RPMIVYTSLMAFIGPWLDFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIA 254
P I S+ F DF+ + G P Y + NM+ + +G+
Sbjct: 238 IPGIAAGSIFTFSLTLGDFIVPQLV---GPP-----GYFIGNMVYSQQGA---------I 280
Query: 255 GSVLIAVPITILFIVMQKFYV 275
G++ +A T++ I++ Y+
Sbjct: 281 GNMPMAAAFTLVPIILIALYL 301
emb|CAB54176.1| (AL110470) putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 300
Score = 45.3 bits (105), Expect = 6e-04
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 33/221 (14%)
Query: 27 IFPVIWMILTSFAKNNNTGFVQSLFPQNWTLENYIGIFNNSQYPYAHWLLNTF-ILAVIC 85
+ P+I + SF + G + +W + + + P+A W+ TF ++AV
Sbjct: 33 VIPLIGVFALSFTTWDGIGAIHPSGLASWR-----AVLTDPRLPHALWV--TFMVMAVSW 85
Query: 86 AVANTFITTIMSYALSRLRFKFRKPFLQFALXXXXXXXXXXXXXXYSILKSINM-----L 140
AV + ++ R R++ + F Y L N L
Sbjct: 86 AVQTPLSILLGTFLAGRQRYRAVLGVVYFV---PLMLSSAAIAIAYKALLDPNFGLGAGL 142
Query: 141 NIWGMALVYVGGSGLGF----------------YVFKGFLDTIPRSIDEAATIDGATRWQ 184
+ ++ ++G GL F +++G + IP+S+ EAA +DGA R +
Sbjct: 143 KLPLLSQDWLGRPGLAFGVVVFVVSWQFVPFHSLIYQGGVQQIPKSLYEAAQVDGAGRIR 202
Query: 185 TFIHITLPLSRPMIVYTSLMAFIGPWLDFMFSSYILGGGDP 225
F ITLP + ++ +S + +G L F ++L G P
Sbjct: 203 QFFSITLPQLKYTVITSSTLMVVGS-LTFFDLIFVLTEGGP 242
emb|CAA19795| (AL031013) putative transmembrane sugar transport protein
[Streptomyces coelicolor]
Length = 342
Score = 44.9 bits (104), Expect = 8e-04
Identities = 36/134 (26%), Positives = 59/134 (43%), Gaps = 8/134 (5%)
Query: 152 GSGLGFYVFKGFLDTIPRSIDEAATIDGATRWQTFIHITLPLSRPMIVYTSLMAFIGPWL 211
G F + L IP+ + EAA +DGA WQ ITLP RP+ L+ F+ +
Sbjct: 206 GWPFAFLIVMAGLQNIPKELYEAAALDGAGVWQQIRRITLPSLRPVNQVLVLVLFLWTFN 265
Query: 212 DFMFSSYILGGGDPKIRTVAYGLQNMMTNSKGSSATNLYQFIAGSVLIAVPITILFIVMQ 271
DF + G P+ ++++ S+ + F AGS + + + L +V
Sbjct: 266 DFNTPFVLFGKAAPE-------AADLISIHIYQSSFVTWNFGAGSAMSVLLLLFLLLVTG 318
Query: 272 KF-YVNGITAGADK 284
+ +V TA A +
Sbjct: 319 VYLFVTSRTARAPR 332
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.328 0.141 0.440
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70990312
Number of Sequences: 457798
Number of extensions: 2726788
Number of successful extensions: 7541
Number of sequences better than 1.0e-02: 172
Number of HSP's better than 0.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 7208
Number of HSP's gapped (non-prelim): 183
length of query: 285
length of database: 140,871,481
effective HSP length: 50
effective length of query: 235
effective length of database: 117,981,581
effective search space: 27725671535
effective search space used: 27725671535
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.8 bits)
S2: 95 (41.4 bits)