Score E
Sequences producing significant alignments: (bits) Value
sp|P44793|COAA_HAEIN PANTOTHENATE KINASE >gi|1073853|pir||I... 249 2e-65
emb|CAA20394| (AL031317) putative pantothenate kinase [Stre... 248 5e-65
gb|AAF33512.1| (AF170176) 96% identity over 316 amino acids... 247 7e-65
sp|P54556|YQJS_BACSU HYPOTHETICAL 33.6 KD PROTEIN IN GLNQ-A... 245 5e-64
gi|147780 (M36321) rts gene product [Escherichia coli] 243 1e-63
gi|145561 (M90071) pantothenate kinase [Escherichia coli] 243 1e-63
sp|P15044|COAA_ECOLI PANTOTHENATE KINASE (RTS PROTEIN) >gi|... 243 1e-63
emb|CAA17208.1| (AL021897) coaA [Mycobacterium tuberculosis] 242 4e-63
emb|CAB39829.1| (AL049491) putative pantothenate kinase [My... 241 7e-63
gb|AAD18874.1| (AE001655) Uridine Kinase [Chlamydophila pne... 56 3e-07
sp|P11664|YGGC_ECOLI HYPOTHETICAL 27.1 KD PROTEIN IN EPD-CM... 55 6e-07
gi|3953458 (AC002328) F20N2.3 [Arabidopsis thaliana] 55 8e-07
gb|AAF30741.1|AE002130_8 (AE002130) uridine kinase [Ureapla... 53 2e-06
sp|P26302|KPPR_WHEAT PHOSPHORIBULOKINASE PRECURSOR (PHOSPHO... 53 2e-06
emb|CAA41020| (X57952) phosphoribulokinase [Triticum aestivum] 53 2e-06
pir||S16585 phosphoribulokinase (EC 2.7.1.19) - wheat 53 2e-06
emb|CAA93462.1| (Z69635) cDNA EST yk472e10.5 comes from thi... 53 3e-06
emb|CAA93459.1| (Z69635) Similarity to Yeast uridine kinase... 53 3e-06
sp|P52623|URK1_MOUSE URIDINE KINASE (URIDINE MONOPHOSPHOKIN... 53 4e-06
ref|NP_014409.1|URK1| Uridine kinase; Urk1p >gi|137110|sp|P... 53 4e-06
sp|P47622|URK_MYCGE URIDINE KINASE (URIDINE MONOPHOSPHOKINA... 52 9e-06
pir||JC1336 phosphoribulokinase (EC 2.7.1.19) - Synechocyst... 52 9e-06
sp|P37101|KPPR_SYNY3 PHOSPHORIBULOKINASE (PHOSPHOPENTOKINAS... 52 9e-06
sp|P25697|KPPR_ARATH PHOSPHORIBULOKINASE PRECURSOR (PHOSPHO... 51 1e-05
emb|CAA69902.2| (Y08610) phosphoribulokinase [Odontella sin... 50 2e-05
emb|CAA72118| (Y11248) phosphoribulokinase [Pisum sativum] 50 2e-05
emb|CAA19591.1| (AL023860) putative Uridine kinase [Schizos... 50 3e-05
sp|P19824|KPPR_CHLRE PHOSPHORIBULOKINASE PRECURSOR (PHOSPHO... 50 3e-05
sp|P27774|KPPR_MESCR PHOSPHORIBULOKINASE PRECURSOR (PHOSPHO... 50 3e-05
sp|P44533|URK_HAEIN URIDINE KINASE (URIDINE MONOPHOSPHOKINA... 49 6e-05
sp|P09559|KPPR_SPIOL PHOSPHORIBULOKINASE PRECURSOR (PHOSPHO... 48 8e-05
gi|170125 (M21338) phosphoribulokinase precursor (EC 2.7.1.... 48 8e-05
sp|O32033|URK_BACSU URIDINE KINASE (URIDINE MONOPHOSPHOKINA... 46 5e-04
pir||QQEC3B hypothetical protein 3 (gapB 5' region) - Esche... 45 0.001
gb|AAD55057.1| (AF173671) phosphoribulokinase [Beta vulgaris] 43 0.003
gi|1788380 (AE000296) uridine/cytidine kinase [Escherichia ... 43 0.003
sp|P31218|URK_ECOLI URIDINE KINASE (URIDINE MONOPHOSPHOKINA... 43 0.003
emb|CAB38514.1| (AL035637) putative uridine kinase/cytosine... 42 0.006
gi|2687881 (AE001115) uridine kinase (udk) [Borrelia burgdo... 42 0.006
sp|Q59190|URK_BORBU URIDINE KINASE (URIDINE MONOPHOSPHOKINA... 42 0.006
sp|P44793|COAA_HAEIN PANTOTHENATE KINASE >gi|1073853|pir||I64082 antothenate kinase
(coaA) homolog - Haemophilus influenzae (strain Rd KW20)
>gi|1573628 (U32746) pantothenate kinase (coaA)
[Haemophilus influenzae Rd]
Length = 311
Score = 249 bits (629), Expect = 2e-65
Identities = 133/303 (43%), Positives = 190/303 (61%), Gaps = 5/303 (1%)
Query: 7 FDEISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLY-KKNLE 65
F +R+ W L + LT +L+ + N+++SL +V +YLPL L+ Y +NL
Sbjct: 10 FLSFNREQWAELRKSVPLKLTEQDLKPLLGFNEDLSLDEVSTIYLPLTRLINYYIDENLH 69
Query: 66 DMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFL 125
+ + KTP II I+GSVAVGKST+AR+LQ LLS + VDL+TTDGFL
Sbjct: 70 RQTVLHRFLGRNNAKTP-YIISIAGSVAVGKSTSARILQSLLSHWPTERKVDLITTDGFL 128
Query: 126 YTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGEK-FEVPIYSHETYDILPNQSQII 184
Y N LK +L +KGFP SYD KL FL VK+G+ PIYSH TYDI+P++ ++
Sbjct: 129 YPLNKLKQDNLLQKKGFPVSYDTPKLIRFLADVKSGKSNVTAPIYSHLTYDIIPDKFDVV 188
Query: 185 DSPDILIVEGINVLQNPQNQL--LYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKY 242
D PDILI+EG+NVLQ N+ ++SDF DFSIYVDA+EKL+++WY++RF + A
Sbjct: 189 DKPDILILEGLNVLQTGNNKTDQTFVSDFVDFSIYVDAEEKLLKEWYIKRFLKFRESAFN 248
Query: 243 DQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKTENHYIDKIY 302
D +++ + + +++ I A +IW +N +NL + I PTR RA +IL K NH ++ I
Sbjct: 249 DPNSYFKHYASLSKEEAIATASKIWDEINGLNLNQNILPTRERANLILKKGHNHQVELIK 308
Query: 303 LKK 305
L+K
Sbjct: 309 LRK 311
emb|CAA20394| (AL031317) putative pantothenate kinase [Streptomyces coelicolor]
Length = 329
Score = 248 bits (626), Expect = 5e-65
Identities = 130/305 (42%), Positives = 192/305 (62%), Gaps = 8/305 (2%)
Query: 9 EISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLYKKNLEDMS 68
+++R W L + + PLT +E+E +R L D I L +V D+YLPL LL LY + +
Sbjct: 24 DLTRPEWSALRDKTPLPLTAEEVEKLRGLGDVIDLDEVRDIYLPLSRLLNLYVGATDGLR 83
Query: 69 YSKGLFL--QKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLY 126
+ FL Q P +IG++GSVAVGKST ARLLQ LLSR V+LVTTDGFL
Sbjct: 84 GALNTFLGEQGSQSGTPFVIGVAGSVAVGKSTVARLLQALLSRWPEHPRVELVTTDGFLL 143
Query: 127 TTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGE-KFEVPIYSHETYDILPNQSQIID 185
T +L+ G++ RKGFPESYD LT F+ +K G+ + P+YSH YDI+P+Q ++
Sbjct: 144 PTRELEARGLMSRKGFPESYDRRALTRFVADIKAGKAEVTAPVYSHLIYDIVPDQRLVVR 203
Query: 186 SPDILIVEGINVLQ-----NPQNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLA 240
PDILIVEG+NVLQ + ++D++DFS+YVDA + IE+WYL RF L A
Sbjct: 204 RPDILIVEGLNVLQPALPGKDGRTRVGLADYFDFSVYVDARTEDIERWYLNRFRKLRATA 263
Query: 241 KYDQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKTENHYIDK 300
+ ++++ ++T++ E++ ++ AR W +N+ NL E + PTR RA ++L K +H + +
Sbjct: 264 FQNPSSYFRKYTQVSEEEALDYARTTWRTINKPNLVENVAPTRGRATLVLRKGPDHKVQR 323
Query: 301 IYLKK 305
+ L+K
Sbjct: 324 LSLRK 328
gb|AAF33512.1| (AF170176) 96% identity over 316 amino acids with E. coli
pantothenate kinase (SW:P15044) [Salmonella typhimurium
LT2]
Length = 316
Score = 247 bits (625), Expect = 7e-65
Identities = 128/312 (41%), Positives = 197/312 (63%), Gaps = 11/312 (3%)
Query: 1 MNEFINFDEISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLY 60
M ++ FD R W L ++ LT DE+ ++ +N+++SL++V ++YLPL LL Y
Sbjct: 9 MTPYLQFD---RSQWAALRDSVPMTLTEDEIAQLKGINEDLSLEEVAEIYLPLSRLLNFY 65
Query: 61 -KKNLEDMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLV 119
NL + + FL + P II I+GSVAVGKSTTAR+LQ LLSR V+L+
Sbjct: 66 ISSNLRRQAVLEQ-FLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELI 124
Query: 120 TTDGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILP 178
TTDGFL+ LK G++ +KGFPESYDM +L F+ +K+G P+YSH YD++P
Sbjct: 125 TTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIP 184
Query: 179 NQSQIIDSPDILIVEGINVLQNPQN-----QLLYISDFYDFSIYVDADEKLIEKWYLERF 233
+ + PDILI+EG+NVLQ+ + +++SDF DFSIYVDA E+L++ WY+ RF
Sbjct: 185 EGDKTVAQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEELLQTWYINRF 244
Query: 234 DSLLKLAKYDQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKT 293
+ A D +++H + K+ +++ +N A +W +N +NL++ I PTR RA +I+ K+
Sbjct: 245 LKFREGAFTDPDSYFHNYAKLSKEEAVNTATSLWKEINWLNLKQNILPTRERASLIMTKS 304
Query: 294 ENHYIDKIYLKK 305
NH ++++ L+K
Sbjct: 305 ANHAVEQVRLRK 316
sp|P54556|YQJS_BACSU HYPOTHETICAL 33.6 KD PROTEIN IN GLNQ-ANSR INTERGENIC REGION
>gi|1303970|dbj|BAA12625| (D84432) YqjS [Bacillus
subtilis] >gi|2634811|emb|CAB14308| (Z99116) similar to
pantothenate kinase [Bacillus subtilis]
Length = 293
Score = 245 bits (618), Expect = 5e-64
Identities = 123/288 (42%), Positives = 192/288 (65%), Gaps = 8/288 (2%)
Query: 26 LTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLYKKNLEDMSYSKGLFLQKIVKTP-PL 84
++ +E +++ LND +S+++VE +Y+PL+ LL L+ K+ + + +FL+ P
Sbjct: 5 VSEEEAKAVEGLNDYLSVEEVETIYIPLVRLLHLHVKSAAERNKHVNVFLKHPHSAKIPF 64
Query: 85 IIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFPE 144
IIGI+GSVAVGKSTTAR+LQ LLSR + V L+TTDGFL+ T +LK ++ RKGFPE
Sbjct: 65 IIGIAGSVAVGKSTTARILQKLLSRLPDRPKVSLITTDGFLFPTAELKKKNMMSRKGFPE 124
Query: 145 SYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNP-- 201
SYD++ L FL +K+G + + P+YSH TYD ++++ DI+I+EGINVLQ+P
Sbjct: 125 SYDVKALLEFLNDLKSGKDSVKAPVYSHLTYDREEGVFEVVEQADIVIIEGINVLQSPTL 184
Query: 202 ----QNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPED 257
+N +++SDF+DFSIYVDA+E I WYLERF L + A + +++H+F + +
Sbjct: 185 EDDRENPRIFVSDFFDFSIYVDAEESRIFTWYLERFRLLRETAFQNPDSYFHKFKDLSDQ 244
Query: 258 KVINLAREIWARVNRVNLREYIEPTRNRAEIILHKTENHYIDKIYLKK 305
+ +A IW VNR NL E I PT+ R+++IL K + H ++++ +++
Sbjct: 245 EADEMAASIWESVNRPNLYENILPTKFRSDLILRKGDGHKVEEVLVRR 292
gi|147780 (M36321) rts gene product [Escherichia coli]
Length = 336
Score = 243 bits (614), Expect = 1e-63
Identities = 128/312 (41%), Positives = 196/312 (62%), Gaps = 11/312 (3%)
Query: 1 MNEFINFDEISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLY 60
M ++ FD R W L ++ L+ DE+ ++ +N+++SL++V ++YLPL LL Y
Sbjct: 29 MTPYLQFD---RNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFY 85
Query: 61 -KKNLEDMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLV 119
NL + + FL + P II I+GSVAVGKSTTAR+LQ LLSR V+L+
Sbjct: 86 ISSNLRRQAVLEQ-FLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELI 144
Query: 120 TTDGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILP 178
TTDGFL+ LK G++ +KGFPESYDM +L F+ +K+G P+YSH YD++P
Sbjct: 145 TTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIP 204
Query: 179 NQSQIIDSPDILIVEGINVLQNPQN-----QLLYISDFYDFSIYVDADEKLIEKWYLERF 233
+ + + PDILI+EG+NVLQ+ + +++SDF DFSIYVDA E L++ WY+ RF
Sbjct: 205 DGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRF 264
Query: 234 DSLLKLAKYDQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKT 293
+ A D +++H + K+ +++ I A +W +N +NL++ I PTR RA +IL K+
Sbjct: 265 LKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKS 324
Query: 294 ENHYIDKIYLKK 305
NH ++++ L+K
Sbjct: 325 ANHAVEEVRLRK 336
gi|145561 (M90071) pantothenate kinase [Escherichia coli]
Length = 308
Score = 243 bits (614), Expect = 1e-63
Identities = 128/312 (41%), Positives = 196/312 (62%), Gaps = 11/312 (3%)
Query: 1 MNEFINFDEISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLY 60
M ++ FD R W L ++ L+ DE+ ++ +N+++SL++V ++YLPL LL Y
Sbjct: 1 MTPYLQFD---RNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFY 57
Query: 61 -KKNLEDMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLV 119
NL + + FL + P II I+GSVAVGKSTTAR+LQ LLSR V+L+
Sbjct: 58 ISSNLRRQAVLEQ-FLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELI 116
Query: 120 TTDGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILP 178
TTDGFL+ LK G++ +KGFPESYDM +L F+ +K+G P+YSH YD++P
Sbjct: 117 TTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIP 176
Query: 179 NQSQIIDSPDILIVEGINVLQNPQN-----QLLYISDFYDFSIYVDADEKLIEKWYLERF 233
+ + + PDILI+EG+NVLQ+ + +++SDF DFSIYVDA E L++ WY+ RF
Sbjct: 177 DGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRF 236
Query: 234 DSLLKLAKYDQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKT 293
+ A D +++H + K+ +++ I A +W +N +NL++ I PTR RA +IL K+
Sbjct: 237 LKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKS 296
Query: 294 ENHYIDKIYLKK 305
NH ++++ L+K
Sbjct: 297 ANHAVEEVRLRK 308
sp|P15044|COAA_ECOLI PANTOTHENATE KINASE (RTS PROTEIN) >gi|2144411|pir||BVECRS
pantothenate kinase (EC 2.7.1.33) - Escherichia coli
>gi|145560 (M90071) pantothenate kinase [Escherichia
coli] >gi|396317 (U00006) pantothenate kinase
[Escherichia coli] >gi|1790409 (AE000471) pantothenate
kinase [Escherichia coli]
Length = 316
Score = 243 bits (614), Expect = 1e-63
Identities = 128/312 (41%), Positives = 196/312 (62%), Gaps = 11/312 (3%)
Query: 1 MNEFINFDEISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLY 60
M ++ FD R W L ++ L+ DE+ ++ +N+++SL++V ++YLPL LL Y
Sbjct: 9 MTPYLQFD---RNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFY 65
Query: 61 -KKNLEDMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLV 119
NL + + FL + P II I+GSVAVGKSTTAR+LQ LLSR V+L+
Sbjct: 66 ISSNLRRQAVLEQ-FLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELI 124
Query: 120 TTDGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILP 178
TTDGFL+ LK G++ +KGFPESYDM +L F+ +K+G P+YSH YD++P
Sbjct: 125 TTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIP 184
Query: 179 NQSQIIDSPDILIVEGINVLQNPQN-----QLLYISDFYDFSIYVDADEKLIEKWYLERF 233
+ + + PDILI+EG+NVLQ+ + +++SDF DFSIYVDA E L++ WY+ RF
Sbjct: 185 DGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRF 244
Query: 234 DSLLKLAKYDQTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKT 293
+ A D +++H + K+ +++ I A +W +N +NL++ I PTR RA +IL K+
Sbjct: 245 LKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKS 304
Query: 294 ENHYIDKIYLKK 305
NH ++++ L+K
Sbjct: 305 ANHAVEEVRLRK 316
emb|CAA17208.1| (AL021897) coaA [Mycobacterium tuberculosis]
Length = 312
Score = 242 bits (610), Expect = 4e-63
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 7/302 (2%)
Query: 9 EISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLYKKNLEDMS 68
E R+ W+ L ++ LT +EL +R L ++I L +VE+VYLPL L+ L + +
Sbjct: 12 EFDRRQWRALRMSTPLALTEEELVGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLF 71
Query: 69 YSKGLFLQKIVKTP----PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGF 124
+ FL + + P P IIG++GSVAVGKSTTAR+LQ LL+R VDLVTTDGF
Sbjct: 72 AATAEFLGEPQQNPDRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGF 131
Query: 125 LYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGEKFE-VPIYSHETYDILPNQSQI 183
LY +L+ ++ RKGFPESY+ L F+ VK+G + P+YSH YDI+P Q+
Sbjct: 132 LYPNAELQRRNLMHRKGFPESYNRRALMRFVTSVKSGSDYACAPVYSHLHYDIIPGAEQV 191
Query: 184 IDSPDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYD 243
+ PDILI+EG+NVLQ L +SD +DFS+YVDA + IE+WY+ RF ++ A D
Sbjct: 192 VRHPDILILEGLNVLQT--GPTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTTAFAD 249
Query: 244 QTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKTENHYIDKIYL 303
+ +H + + + + AREIW +NR NL E I PTR RA ++L K +H I+++ L
Sbjct: 250 PESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLRKDADHSINRLRL 309
Query: 304 KK 305
+K
Sbjct: 310 RK 311
emb|CAB39829.1| (AL049491) putative pantothenate kinase [Mycobacterium leprae]
Length = 312
Score = 241 bits (608), Expect = 7e-63
Identities = 132/302 (43%), Positives = 186/302 (60%), Gaps = 7/302 (2%)
Query: 9 EISRKTWQNLYNTSIAPLTHDELESIRSLNDEISLQDVEDVYLPLIHLLRLYKKNLEDMS 68
E RK W+ L ++ LT +EL +R L ++I L +VE+VYLPL L+ L + +
Sbjct: 12 EFDRKQWRALRMSTPLALTEEELIGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLF 71
Query: 69 YSKGLFLQKIVKTP----PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGF 124
+ FL + + P P IIG++GSVAVGKSTTAR+LQ LL+R VDLVTTDGF
Sbjct: 72 AATAEFLGEPQQNPGRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHTRVDLVTTDGF 131
Query: 125 LYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGEKFE-VPIYSHETYDILPNQSQI 183
LY +L ++ RKGFPESY+ L F+ VK+G + P+YSH YD +P +
Sbjct: 132 LYPNAELGRRNLMHRKGFPESYNRRALMRFVTSVKSGADYACAPVYSHLRYDTIPGAKHV 191
Query: 184 IDSPDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYD 243
+ PDILI+EG+NVLQ L +SD +DFS+YVDA + IE+WY+ RF ++ A D
Sbjct: 192 VRHPDILILEGLNVLQT--GPTLMVSDLFDFSLYVDARIQDIEQWYVSRFLAMRGTAFAD 249
Query: 244 QTNFYHQFTKMPEDKVINLAREIWARVNRVNLREYIEPTRNRAEIILHKTENHYIDKIYL 303
+ +H ++ + + K I AREIW +NR NL E I PTR RA ++L K +H I+++ L
Sbjct: 250 PESHFHHYSALTDSKAIIAAREIWRSINRPNLVENILPTRPRATLVLRKDADHSINRLRL 309
Query: 304 KK 305
+K
Sbjct: 310 RK 311
gb|AAD18874.1| (AE001655) Uridine Kinase [Chlamydophila pneumoniae]
Length = 222
Score = 56.2 bits (133), Expect = 3e-07
Identities = 50/210 (23%), Positives = 93/210 (43%), Gaps = 32/210 (15%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFP 143
+IIGI+G GK+T + ++ + + D D YT + N+ I D P
Sbjct: 7 MIIGITGGSGAGKTTLTQNIKEIFGEDVSVICQDNYYKDRSHYTPEERANL-IWDH---P 62
Query: 144 ESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQN 203
+++D + L S + +KN E + P++ + + + I +++VEGI V +N +
Sbjct: 63 DAFDNDLLISDIKRLKNNEIVQAPVFDFVLGNRSKTEIETIYPSKVILVEGILVFENQE- 121
Query: 204 QLLYISDFYDFSIYV--DADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPEDKVIN 261
+ D D I+V DADE+++ + + + D V
Sbjct: 122 ----LRDLMDIRIFVDTDADERILRRMVRD--------------------VQEQGDSVDC 157
Query: 262 LAREIWARVNRVNLREYIEPTRNRAEIILH 291
+ + V ++ ++IEPTR A+II+H
Sbjct: 158 IMSRYLSMVKPMH-EKFIEPTRKYADIIVH 186
sp|P11664|YGGC_ECOLI HYPOTHETICAL 27.1 KD PROTEIN IN EPD-CMTA INTERGENIC REGION (ORF 3)
(F237) >gi|882457 (U28377) ORF_f237; alternate name
yggC; orf3 of X14436 [Escherichia coli] >gi|1789296
(AE000376) putative kinase [Escherichia coli]
Length = 237
Score = 55.4 bits (131), Expect = 6e-07
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 44 QDVEDVYLPLIHLLRLYKKNLEDMSYSKGLFLQKIVKTPPLIIGISGSVAVGKSTTARLL 103
+++E+V+ PL+H+L LQ + ++ + GKST
Sbjct: 19 EEIENVHKPLLHMLAA---------------LQTVNPQRRTVVFLCAPPGTGKSTLTTFW 63
Query: 104 QLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGEK 163
+ L + + + DGF + + L + KG PE++D+ KLT L V G+
Sbjct: 64 EYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENLRQVVEGD- 122
Query: 164 FEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEK 223
P Y + +D P + + + ++IVEG N L + L ++ F DFSI++ A +
Sbjct: 123 CTWPQYDRQKHD--PVEDALHVTAPLVIVEG-NWLLLDDEKWLELASFCDFSIFIHAPAQ 179
Query: 224 LIEKWYLER 232
++ + + R
Sbjct: 180 ILRERLISR 188
gi|3953458 (AC002328) F20N2.3 [Arabidopsis thaliana]
Length = 521
Score = 55.0 bits (130), Expect = 8e-07
Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 87 GISGSVAVGKSTTARLL--QLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRK-GFP 143
G++G A GK+T ++ QL RA +V D F + N+++ + + D P
Sbjct: 52 GVAGGAASGKTTVCDMIMQQLHDQRAV------VVNQDSFYHNVNEVELVRVHDYNFDHP 105
Query: 144 ESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQN 203
+++D E+L S + ++ G+ ++P Y ++Y + ++ D++I+EGI + +P+
Sbjct: 106 DAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPR- 164
Query: 204 QLLYISDFYDFSIYVDA 220
+ D + I+VDA
Sbjct: 165 ----VRDLMNMKIFVDA 177
gb|AAF30741.1|AE002130_8 (AE002130) uridine kinase [Ureaplasma urealyticum]
Length = 207
Score = 53.5 bits (126), Expect = 2e-06
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGI--LDRK 140
P++I I+G+ GK+T A + ++R PK T +V Y +N N L
Sbjct: 6 PILILIAGASGSGKTTFANEI---IAR-IPKNTTSVVICQDSYYISNSQLNKKERRLINY 61
Query: 141 GFPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQN 200
P S++ E + L +K +K +VPIY ++T +I +++ I D++++EGI + +
Sbjct: 62 DHPSSFEWELMREQLSDIKKRKKIKVPIYDYKT-EIRLDKTIDISDVDVIVLEGIYAIYD 120
Query: 201 PQNQLLYISDFYDFSIYVDA--DEKLIEKWYLE------RFDSLLKLAKYDQTNFYHQFT 252
I+ D I+++ DE LI + + F+S++ + + Y QF
Sbjct: 121 D-----VINQIADLKIFIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFV 175
Query: 253 KMPEDKVINLAREIWARVNRVNL 275
+ P K N++ +W NRV L
Sbjct: 176 E-PSKKNANVS-VLWNEHNRVAL 196
sp|P26302|KPPR_WHEAT PHOSPHORIBULOKINASE PRECURSOR (PHOSPHOPENTOKINASE) (PRKASE) (PRK)
>gi|100839|pir||S15743 phosphoribulokinase (EC 2.7.1.19)
- wheat >gi|5924030|emb|CAB56544.1| (X51608)
phosphoribulokinase [Triticum aestivum]
Length = 404
Score = 53.5 bits (126), Expect = 2e-06
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDR 139
P++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 58 PIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDR 117
Query: 140 KGF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDIL 190
G P++ D + + + +K G+ E PIY+H T L + +++I P I
Sbjct: 118 TGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTG--LLDPAELIQPPKIF 175
Query: 191 IVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
++EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 176 VIEGLHPMYDER-----VRELLDFSIYLDISNEVKFAWKIQR 212
emb|CAA41020| (X57952) phosphoribulokinase [Triticum aestivum]
Length = 404
Score = 53.5 bits (126), Expect = 2e-06
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDR 139
P++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 58 PIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDR 117
Query: 140 KGF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDIL 190
G P++ D + + + +K G+ E PIY+H T L + +++I P I
Sbjct: 118 TGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTG--LLDPAELIQPPKIF 175
Query: 191 IVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
++EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 176 VIEGLHPMYDER-----VRELLDFSIYLDISNEVKFAWKIQR 212
pir||S16585 phosphoribulokinase (EC 2.7.1.19) - wheat
Length = 404
Score = 53.5 bits (126), Expect = 2e-06
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDR 139
P++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 58 PIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDR 117
Query: 140 KGF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDIL 190
G P++ D + + + +K G+ E PIY+H T L + +++I P I
Sbjct: 118 TGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTG--LLDPAELIQPPKIF 175
Query: 191 IVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
++EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 176 VIEGLHPMYDER-----VRELLDFSIYLDISNEVKFAWKIQR 212
emb|CAA93462.1| (Z69635) cDNA EST yk472e10.5 comes from this gene; cDNA EST
yk473c9.5 comes from this gene; cDNA EST yk473c9.3 comes
from this gene; cDNA EST yk472e10.3 comes from this gene
[Caenorhabditis elegans]
Length = 555
Score = 53.1 bits (125), Expect = 3e-06
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGF--LYTTNDLKNMGILDRK 140
P +IG+ G A GK+T A +++ P +T+ ++ D F + T ++K R
Sbjct: 104 PFVIGVCGGSASGKTTVAE--KIVERLGIPWVTI--LSMDSFYKVLTPEEIK-AAHESRY 158
Query: 141 GF--PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVL 198
F P ++D + L L ++ G+ +VP+Y T+ PN S+++ D+LI EGI
Sbjct: 159 NFDGPNAFDFDLLYEVLKRLREGKSVDVPVYDFNTHSRDPN-SKMMYGADVLIFEGILAF 217
Query: 199 QNPQNQLLYISDFYDFSIYVDADEKL 224
+ + I + D ++VD D L
Sbjct: 218 HDER-----IKNLMDMKVFVDTDGDL 238
emb|CAA93459.1| (Z69635) Similarity to Yeast uridine kinase (SW:URK1_YEAST); cDNA
EST EMBL:Z14695 comes from this gene; cDNA EST CEMSE17F
comes from this gene; cDNA EST EMBL:D67355 comes from
this gene; cDNA EST yk209h1.5 comes from this gen...
Length = 515
Score = 53.1 bits (125), Expect = 3e-06
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGF--LYTTNDLKNMGILDRK 140
P +IG+ G A GK+T A +++ P +T+ ++ D F + T ++K R
Sbjct: 64 PFVIGVCGGSASGKTTVAE--KIVERLGIPWVTI--LSMDSFYKVLTPEEIK-AAHESRY 118
Query: 141 GF--PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVL 198
F P ++D + L L ++ G+ +VP+Y T+ PN S+++ D+LI EGI
Sbjct: 119 NFDGPNAFDFDLLYEVLKRLREGKSVDVPVYDFNTHSRDPN-SKMMYGADVLIFEGILAF 177
Query: 199 QNPQNQLLYISDFYDFSIYVDADEKL 224
+ + I + D ++VD D L
Sbjct: 178 HDER-----IKNLMDMKVFVDTDGDL 198
sp|P52623|URK1_MOUSE URIDINE KINASE (URIDINE MONOPHOSPHOKINASE) >gi|471981 (L31783)
uridine kinase [Mus musculus]
Length = 260
Score = 52.7 bits (124), Expect = 4e-06
Identities = 41/147 (27%), Positives = 74/147 (49%), Gaps = 16/147 (10%)
Query: 83 PLIIGISGSVAVGKSTTA-RLLQLL----LSRAFPKLTVDLVTTDGFLYT-TNDLKNMGI 136
P +IG+SG A GKST ++++LL + R KL + ++ D F T + K +
Sbjct: 6 PFLIGVSGGTASGKSTVCEKIMELLGQNEVDRRQRKLVI--LSQDCFYKVLTAEQKAKAL 63
Query: 137 LDRKGF--PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEG 194
+ F P+++D + + L ++ G+ EVP Y T+ LP ++ ++ D+++ EG
Sbjct: 64 KGQYNFDHPDAFDNDLMHKTLKNIVEGKTVEVPTYDFVTHSRLP-ETTVVYPADVVLFEG 122
Query: 195 INVLQNPQNQLLYISDFYDFSIYVDAD 221
I V + I D + ++VD D
Sbjct: 123 ILVFYTQE-----IRDMFHLRLFVDTD 144
ref|NP_014409.1|URK1| Uridine kinase; Urk1p >gi|137110|sp|P27515|URK1_YEAST URIDINE
KINASE (URIDINE MONOPHOSPHOKINASE)
>gi|320868|pir||S29374 uridine kinase (EC 2.7.1.48) -
yeast (Saccharomyces cerevisiae) >gi|4773|emb|CAA37946|
(X53998) uridine kinase [Saccharomyces cerevisiae]
>gi|496728|emb|CAA54580| (X77395) uridine kinase
[Saccharomyces cerevisiae] >gi|1302490|emb|CAA96289|
(Z71627) ORF YNR012w [Saccharomyces cerevisiae]
Length = 501
Score = 52.7 bits (124), Expect = 4e-06
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 81 TPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDR- 139
T P IIGI G+ GK++ A + +S TV L++ D F +G DR
Sbjct: 54 TTPYIIGIGGASGSGKTSVAAKI---VSSINVPWTV-LISLDNFY------NPLGPEDRA 103
Query: 140 KGFPESYDMEKLTSF--------LYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
+ F YD ++ + + ++K G++ +P+YS ++ +P+++ +I +++
Sbjct: 104 RAFKNEYDFDEPNAINLDLAYKCILNLKEGKRTNIPVYSFVHHNRVPDKNIVIYGASVVV 163
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDAD 221
+EGI L + + + D D IYVDAD
Sbjct: 164 IEGIYALYDRR-----LLDLMDLKIYVDAD 188
sp|P47622|URK_MYCGE URIDINE KINASE (URIDINE MONOPHOSPHOKINASE) >gi|1361894|pir||C64242
uridine kinase (EC 2.7.1.48) - Mycoplasma genitalium
(SGC3) >gi|3844971 (U39720) uridine kinase (udk)
[Mycoplasma genitalium]
Length = 213
Score = 51.5 bits (121), Expect = 9e-06
Identities = 52/220 (23%), Positives = 91/220 (40%), Gaps = 54/220 (24%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGF- 142
+++ ISG GK+T A ++ LLS+ KL V ++ D + KN +L RK
Sbjct: 6 ILVAISGGSCSGKTTVAEMIYQLLSK---KLKVAIICQDNYY---KSYKNKPLLKRKTIN 59
Query: 143 ---PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQ 199
P+++D + L S + + NG VP+Y + Y ++ I D++I+EG
Sbjct: 60 FDHPDAFDWKLLRSHIEDLLNGSIVNVPLYDYINYTRAKKTAK-IGPIDVVILEG----- 113
Query: 200 NPQNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPE--- 256
+ W+ E+ L KL + +TN + + E
Sbjct: 114 -------------------------LMPWFDEKLSRLSKLKIFIETNGEERLIRRIERDW 148
Query: 257 ------DKVINLAREIWARVNRVNLREYIEPTRNRAEIIL 290
D +I REI A + + ++E + A++IL
Sbjct: 149 QRGRNIDSIIKQWREIVAPMYEI----FVEKMKRNADLIL 184
pir||JC1336 phosphoribulokinase (EC 2.7.1.19) - Synechocystis sp. (PCC 6803)
>gi|1653545|dbj|BAA18458| (D90914) phosphoribulokinase
[Synechocystis sp.]
Length = 332
Score = 51.5 bits (121), Expect = 9e-06
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGI--LDRKG 141
++IG++G GKST R L L F +TV + D K G+ LD
Sbjct: 9 VLIGVAGDSGCGKSTFLRRLTDLFGEEF--MTV-ICLDDYHSLDRQGRKAAGVTALD--- 62
Query: 142 FPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNP 201
P + + + + + +K+G+ PIY+HET + P + ++ ++++EG++ L +
Sbjct: 63 -PRANNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEK--VEPNKVVVIEGLHPLYDE 119
Query: 202 QNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPEDKVIN 261
+ + + DF +Y+D E++ W ++R D H +
Sbjct: 120 R-----VRELVDFGVYLDISEEVKINWKIQR----------DMAERGHTY---------- 154
Query: 262 LAREIWARVN--RVNLREYIEPTRNRAEIILHKTENHYID 299
+I A +N + + YIEP + A++++ I+
Sbjct: 155 --EDILASINARKPDFTAYIEPQKQYADVVIQVLPTRLIE 192
sp|P37101|KPPR_SYNY3 PHOSPHORIBULOKINASE (PHOSPHOPENTOKINASE) (PRK) >gi|154479 (M77134)
phosphoribulokinase [Synechocystis sp.]
Length = 332
Score = 51.5 bits (121), Expect = 9e-06
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGI--LDRKG 141
++IG++G GKST R L L F +TV + D K G+ LD
Sbjct: 9 VLIGVAGDSGCGKSTFLRRLTDLFGEEF--MTV-ICLDDYHSLDRQGRKAAGVTALD--- 62
Query: 142 FPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNP 201
P + + + + + +K+G+ PIY+HET + P + ++ ++++EG++ L +
Sbjct: 63 -PRANNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEK--VEPNKVVVIEGLHPLYDE 119
Query: 202 QNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPEDKVIN 261
+ + + DF +Y+D E++ W ++R D H +
Sbjct: 120 R-----VRELVDFGVYLDISEEVKINWKIQR----------DMAERGHTY---------- 154
Query: 262 LAREIWARVN--RVNLREYIEPTRNRAEIILHKTENHYID 299
+I A +N + + YIEP + A++++ I+
Sbjct: 155 --EDILASINARKPDFTAYIEPQKQYADVVIQVLPTRLIE 192
sp|P25697|KPPR_ARATH PHOSPHORIBULOKINASE PRECURSOR (PHOSPHOPENTOKINASE) (PRKASE) (PRK)
>gi|99744|pir||S16583 phosphoribulokinase (EC 2.7.1.19)
precursor - Arabidopsis thaliana >gi|16441|emb|CAA41155|
(X58149) Ribulose-5-phosphate kinase [Arabidopsis
thaliana]
Length = 395
Score = 51.2 bits (120), Expect = 1e-05
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDRK 140
++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 51 IVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLDRY 110
Query: 141 GF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
G P + D + + + +KNG E PIY+H T + P ++I P IL+
Sbjct: 111 GRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDP--PELIQPPKILV 168
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+EG++ + + + + D DFSIY+D ++ W ++R
Sbjct: 169 IEGLHPMFDER-----VRDLLDFSIYLDISNEVKFAWKIQR 204
emb|CAA69902.2| (Y08610) phosphoribulokinase [Odontella sinensis]
Length = 396
Score = 50.4 bits (118), Expect = 2e-05
Identities = 42/170 (24%), Positives = 72/170 (41%), Gaps = 30/170 (17%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLL-------------------SRAFPKLTVDLVTTDG 123
P++IG++ GKST R L + + LT L D
Sbjct: 50 PIVIGVAADSGCGKSTFMRRLTSIFGGEGVGPLGGGFDNGGWETNSLVSDLTTVLCLDD- 108
Query: 124 FLYTTNDLKNMGILDRKGF-PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQ 182
Y ND + R P + + + + +KNGE E PIY+H L
Sbjct: 109 --YHLNDRNGRKVTQRTALDPLENNFDLMYEQIAALKNGESIEKPIYNHVN-GTLDTPET 165
Query: 183 IIDSPDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
I+ +P I+I+EG++ + + + + D DFS+Y+D +++ W ++R
Sbjct: 166 IVPTP-IVIIEGLHPMYDER-----VRDLLDFSLYLDISDEVKLNWKIQR 209
emb|CAA72118| (Y11248) phosphoribulokinase [Pisum sativum]
Length = 352
Score = 50.4 bits (118), Expect = 2e-05
Identities = 43/161 (26%), Positives = 76/161 (46%), Gaps = 19/161 (11%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDRK 140
++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 7 IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 66
Query: 141 GF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
G P++ D + + + +K+G+ + PIY+H T L + ++I P IL+
Sbjct: 67 GRKEKGVTALDPKANDFDLMYEQVKAIKDGKSVQKPIYNHVTG--LLDAPELIKPPKILV 124
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 125 IEGLHPMYDSR-----VRELLDFSIYLDISNEVKFAWKIQR 160
emb|CAA19591.1| (AL023860) putative Uridine kinase [Schizosaccharomyces pombe]
Length = 454
Score = 50.0 bits (117), Expect = 3e-05
Identities = 40/139 (28%), Positives = 69/139 (48%), Gaps = 13/139 (9%)
Query: 86 IGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTN-DLKNMGILDRKGF-- 142
IGI+G GK++ A+L+ L+ V +++ D F + N + K + F
Sbjct: 24 IGIAGPSGSGKTSVAQLIVKALNLPH----VVILSLDSFYKSLNAEQKKRAFNNDYDFDS 79
Query: 143 PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQ 202
PE+ D + L L +K G K ++PIYS ++ LP + + + I+I+EGI L + +
Sbjct: 80 PEAIDWDLLFVKLLELKQGRKVDIPIYSFNEHNRLPETNTLFGA-SIIILEGIFALYDEK 138
Query: 203 NQLLYISDFYDFSIYVDAD 221
I D S+++D D
Sbjct: 139 -----IRSLLDVSVFLDTD 152
sp|P19824|KPPR_CHLRE PHOSPHORIBULOKINASE PRECURSOR (PHOSPHOPENTOKINASE) (PRKASE) (PRK)
>gi|167432 (M36123) phosphoribulokinase [Chlamydomonas
reinhardtii] >gi|227431|prf||1703465A
phosphoribulokinase [Chlamydomonas reinhardtii]
Length = 375
Score = 50.0 bits (117), Expect = 3e-05
Identities = 41/166 (24%), Positives = 77/166 (45%), Gaps = 21/166 (12%)
Query: 80 KTPPLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTV----DLVTTDGFLYTTNDLKNMG 135
K ++IG++ GKST R + + PK D T + T L +
Sbjct: 33 KDKTVVIGLAADSGCGKSTFMRRMTSIFG-GVPKPPAGGNPDSNTLISDMTTVICLDDYH 91
Query: 136 ILDRKG---------FPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDS 186
LDR G PE+ + + + + + +K G+ + PIY+H + L + + I+S
Sbjct: 92 CLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSG--LIDAPEKIES 149
Query: 187 PDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
P IL++EG++ + + +++ DF IY+D + + W ++R
Sbjct: 150 PPILVIEGLHPFYDKR-----VAELLDFKIYLDISDDIKFAWKIQR 190
sp|P27774|KPPR_MESCR PHOSPHORIBULOKINASE PRECURSOR (PHOSPHOPENTOKINASE) (PRKASE) (PRK)
>gi|167266 (M73707) phosphoribulokinase
[Mesembryanthemum crystallinum]
Length = 397
Score = 49.6 bits (116), Expect = 3e-05
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKL---TVDLVTTDGFLYTTNDLKNMGILDRK 140
++IG++ GKST R L + A D T T L + LDR
Sbjct: 52 IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDRT 111
Query: 141 GF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
G P + D + + + +K G+ E PIY+H T L + ++I P IL+
Sbjct: 112 GRKEKGVTALDPRANDFDLMYEQVKALKEGKAVEKPIYNHVTG--LLDAPELIKPPKILV 169
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+EG++ + + + + D DFSIY+D ++ W ++R
Sbjct: 170 IEGLHPMFDSR-----VRDLLDFSIYLDISNEVKFAWKIQR 205
sp|P44533|URK_HAEIN URIDINE KINASE (URIDINE MONOPHOSPHOKINASE) (PYRIMIDINE
RIBONUCLEOSIDE KINASE) >gi|1075436|pir||I64049 uridine
kinase (uridine monophosphokinase) (udk) homolog -
Haemophilus influenzae (strain Rd KW20) >gi|1573086
(U32699) uridine kinase (udk) [Haemophilus influenzae
Rd]
Length = 213
Score = 48.8 bits (114), Expect = 6e-05
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLK-NMGILDRKGF 142
+II I+G+ A GKS+ A + L + ++T D + + L+ +
Sbjct: 7 IIIAITGASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKTNYDH 66
Query: 143 PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQ 202
P S D + L L ++KNG +VP+YS+ + N++ I+I+EGI +L + +
Sbjct: 67 PNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEH-TRTNETTHFTPKRIVILEGILLLTDER 125
Query: 203 NQLLYISDFYDFSIYVD 219
+ D S++VD
Sbjct: 126 -----VRQLADISVFVD 137
sp|P09559|KPPR_SPIOL PHOSPHORIBULOKINASE PRECURSOR (PHOSPHOPENTOKINASE) (PRKASE) (PRK)
>gi|81469|pir||S02099 phosphoribulokinase (EC 2.7.1.19)
precursor - spinach >gi|21279|emb|CAA30499| (X07654)
phosphoribulokinase [Spinacia oleracea]
>gi|226109|prf||1410321A phosphoribulokinase [Spinacia
oleracea]
Length = 402
Score = 48.4 bits (113), Expect = 8e-05
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDRK 140
++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 57 IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRN 116
Query: 141 GF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
G P++ D + + + +K G+ + PIY+H + + P ++I P IL+
Sbjct: 117 GRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDP--PELIQPPKILV 174
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 175 IEGLHPMYDAR-----VRELLDFSIYLDISNEVKFAWKIQR 210
gi|170125 (M21338) phosphoribulokinase precursor (EC 2.7.1.19) [Spinacia
oleracea]
Length = 407
Score = 48.4 bits (113), Expect = 8e-05
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAF--PKL-TVDLVTTDGFLYTTNDLKNMGILDRK 140
++IG++ GKST R L + A PK D T T L + LDR
Sbjct: 62 IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRN 121
Query: 141 GF---------PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILI 191
G P++ D + + + +K G+ + PIY+H + + P ++I P IL+
Sbjct: 122 GRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDP--PELIQPPKILV 179
Query: 192 VEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+EG++ + + + + + DFSIY+D ++ W ++R
Sbjct: 180 IEGLHPMYDAR-----VRELLDFSIYLDISNEVKFAWKIQR 215
sp|O32033|URK_BACSU URIDINE KINASE (URIDINE MONOPHOSPHOKINASE)
>gi|2635179|emb|CAB14675| (Z99117) uridine kinase
[Bacillus subtilis]
Length = 211
Score = 45.7 bits (106), Expect = 5e-04
Identities = 47/216 (21%), Positives = 94/216 (42%), Gaps = 31/216 (14%)
Query: 83 PLIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRK-G 141
P++IGI+G GK++ R + F ++ ++ D + + L L+
Sbjct: 5 PVVIGIAGGSGSGKTSVTRSIY----EQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYD 60
Query: 142 FPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNP 201
P ++D + L + + N E PIY ++ + ++ ++ D++I+EGI VL++
Sbjct: 61 HPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHT-RSEETVHVEPKDVIILEGILVLEDK 119
Query: 202 QNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPEDKVIN 261
+ + D D +YVD D L +++ D + I+
Sbjct: 120 R-----LRDLMDIKLYVDTDADL----------RIIRRIMRDINE---------RGRSID 155
Query: 262 LAREIWARVNRVNLREYIEPTRNRAEIILHK-TENH 296
E + V R +++EPT+ A+II+ + +NH
Sbjct: 156 SVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNH 191
pir||QQEC3B hypothetical protein 3 (gapB 5' region) - Escherichia coli
>gi|41420|emb|CAA32602| (X14436) ORF3 (AA 1-157)
[Escherichia coli]
Length = 157
Score = 44.5 bits (103), Expect = 0.001
Identities = 33/111 (29%), Positives = 57/111 (50%), Gaps = 4/111 (3%)
Query: 122 DGFLYTTNDLKNMGILDRKGFPESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQS 181
DGF + + L + KG PE++D+ KLT L V G+ P Y + +D P +
Sbjct: 2 DGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENLRQVVEGD-CTWPQYDRQKHD--PVED 58
Query: 182 QIIDSPDILIVEGINVLQNPQNQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+ + ++IVEG N L + L ++ F DFSI++ A +++ + + R
Sbjct: 59 ALHVTAPLVIVEG-NWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISR 108
gb|AAD55057.1| (AF173671) phosphoribulokinase [Beta vulgaris]
Length = 271
Score = 43.4 bits (100), Expect = 0.003
Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 143 PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQ 202
P + D + + + +K G+ + PIY+H + + P ++I P IL++EG++ + + +
Sbjct: 61 PRANDFDLMYDQVKALKQGKPVDKPIYNHVSGLLDP--PEVIQPPKILVIEGLHPMYDAR 118
Query: 203 NQLLYISDFYDFSIYVDADEKLIEKWYLER 232
+ + DFS+Y+D ++ W ++R
Sbjct: 119 -----VRELLDFSLYLDISNEVKFAWKIQR 143
gi|1788380 (AE000296) uridine/cytidine kinase [Escherichia coli]
Length = 231
Score = 43.4 bits (100), Expect = 0.003
Identities = 34/137 (24%), Positives = 64/137 (45%), Gaps = 7/137 (5%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLK-NMGILDRKGF 142
+IIGI+G+ A GKS A L L + ++ D + + L +
Sbjct: 27 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDH 86
Query: 143 PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQ 202
P + D L L +K G ++P+YS+ + + ++ ++ ++I+EGI +L + +
Sbjct: 87 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRM-KETVTVEPKKVIILEGILLLTDAR 145
Query: 203 NQLLYISDFYDFSIYVD 219
+ D +FSI+VD
Sbjct: 146 -----LRDELNFSIFVD 157
sp|P31218|URK_ECOLI URIDINE KINASE (URIDINE MONOPHOSPHOKINASE) (PYRIMIDINE
RIBONUCLEOSIDE KINASE) >gi|2126105|pir||I55002 uridine
kinase (EC 2.7.1.48) - Escherichia coli
>gi|296947|emb|CAA50593| (X71492) uridine kinase
[Escherichia coli] >gi|1736770|dbj|BAA15919| (D90844)
Uridine kinase (EC 2.7.1.48) [Escherichia coli]
>gi|1736776|dbj|BAA15924| (D90845) Uridine kinase (EC
2.7.1.48) [Escherichia coli]
Length = 213
Score = 43.4 bits (100), Expect = 0.003
Identities = 34/137 (24%), Positives = 64/137 (45%), Gaps = 7/137 (5%)
Query: 84 LIIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLK-NMGILDRKGF 142
+IIGI+G+ A GKS A L L + ++ D + + L +
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDH 68
Query: 143 PESYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQ 202
P + D L L +K G ++P+YS+ + + ++ ++ ++I+EGI +L + +
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRM-KETVTVEPKKVIILEGILLLTDAR 127
Query: 203 NQLLYISDFYDFSIYVD 219
+ D +FSI+VD
Sbjct: 128 -----LRDELNFSIFVD 139
emb|CAB38514.1| (AL035637) putative uridine kinase/cytosine deaminase
[Schizosaccharomyces pombe]
Length = 367
Score = 42.2 bits (97), Expect = 0.006
Identities = 59/215 (27%), Positives = 86/215 (39%), Gaps = 48/215 (22%)
Query: 85 IIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFPE 144
IIGI+G GK+ L L + P L+ FLY + +DR
Sbjct: 10 IIGIAGGPFSGKTQLCEQLLERLKSSAPSTFSKLIHLTSFLYPNS-------VDRYAL-S 61
Query: 145 SYDMEKLTSFLYHVKNG-EKFEVPIYSHETYDILPNQSQI---IDSPDILIVEGINVLQN 200
SYD+E L + G EK LP+ S I +D I+++EG +L
Sbjct: 62 SYDIEAFKKVLSLISQGAEKI-----------CLPDGSCIKLPVDQNRIILIEGYYLLL- 109
Query: 201 PQNQLLYISDFYDFSIYVDADEKLIEKWYLERFDSLLKLAKYDQTNFYHQFTKMPEDKVI 260
P+ Y S + +Y DAD +L E+ L+R +K K D T + F +
Sbjct: 110 PELLPYYTSKIF---VYEDADTRL-ERCVLQR----VKAEKGDLTKVLNDFVTL------ 155
Query: 261 NLAREIWARVNRVNLREYIEPTRNRAEIILHKTEN 295
++ I PTR A+IIL + EN
Sbjct: 156 ----------SKPAYDSSIHPTRENADIILPQKEN 180
gi|2687881 (AE001115) uridine kinase (udk) [Borrelia burgdorferi]
Length = 207
Score = 42.2 bits (97), Expect = 0.006
Identities = 49/226 (21%), Positives = 94/226 (40%), Gaps = 39/226 (17%)
Query: 85 IIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFPE 144
IIGISG GK+T +S P+ L++ D + + D ++ P+
Sbjct: 5 IIGISGGSGSGKTTVVS----KISEFIPEFV--LISQDNYYKSVGDYEHEFSKVNFDHPD 58
Query: 145 SYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQNQ 204
++D L ++K ++P+Y + ++ +P ++IVEGI + +
Sbjct: 59 AFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTP-VVIVEGIMIFVEER-- 115
Query: 205 LLYISDFYDFSIYVDADEKLIEKWYLERFDSLLK--LAKYDQTNFYHQFTKMPEDKVINL 262
+ + D IY+D + RF L+ ++K +T + D+ +N
Sbjct: 116 ---VRNLIDLKIYIDTPNDI-------RFIRRLRRDISKRGRT------VESVIDQYLNT 159
Query: 263 AREIWARVNRVNLREYIEPTRNRAEIIL----HKTENHYIDKIYLK 304
R + R +IEPT+ A++I+ H + Y+ +LK
Sbjct: 160 TRWGYYR--------FIEPTKEYADLIIPEGGHNDKALYVLSTFLK 197
sp|Q59190|URK_BORBU URIDINE KINASE (URIDINE MONOPHOSPHOKINASE) (PYRIMIDINE
RIBONUCLEOSIDE KINASE) >gi|1405442|emb|CAA66081.1|
(X97449) uridine kinase [Borrelia burgdorferi]
Length = 206
Score = 42.2 bits (97), Expect = 0.006
Identities = 49/226 (21%), Positives = 94/226 (40%), Gaps = 39/226 (17%)
Query: 85 IIGISGSVAVGKSTTARLLQLLLSRAFPKLTVDLVTTDGFLYTTNDLKNMGILDRKGFPE 144
IIGISG GK+T +S P+ L++ D + + D ++ P+
Sbjct: 4 IIGISGGSGSGKTTVVS----KISEFIPEFV--LISQDNYYKSVGDYEHEFSKVNFDHPD 57
Query: 145 SYDMEKLTSFLYHVKNGEKFEVPIYSHETYDILPNQSQIIDSPDILIVEGINVLQNPQNQ 204
++D L ++K ++P+Y + ++ +P ++IVEGI + +
Sbjct: 58 AFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTP-VVIVEGIMIFVEER-- 114
Query: 205 LLYISDFYDFSIYVDADEKLIEKWYLERFDSLLK--LAKYDQTNFYHQFTKMPEDKVINL 262
+ + D IY+D + RF L+ ++K +T + D+ +N
Sbjct: 115 ---VRNLIDLKIYIDTPNDI-------RFIRRLRRDISKRGRT------VESVIDQYLNT 158
Query: 263 AREIWARVNRVNLREYIEPTRNRAEIIL----HKTENHYIDKIYLK 304
R + R +IEPT+ A++I+ H + Y+ +LK
Sbjct: 159 TRWGYYR--------FIEPTKEYADLIIPEGGHNDKALYVLSTFLK 196
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.139 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86445571
Number of Sequences: 457798
Number of extensions: 3731113
Number of successful extensions: 10097
Number of sequences better than 1.0e-02: 40
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 10022
Number of HSP's gapped (non-prelim): 42
length of query: 306
length of database: 140,871,481
effective HSP length: 55
effective length of query: 251
effective length of database: 115,692,591
effective search space: 29038840341
effective search space used: 29038840341
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 95 (41.4 bits)