Score E
Sequences producing significant alignments: (bits) Value
emb|CAA04683| (AJ001330) ornithine transcarbamoylase [Lacto... 422 e-117
emb|CAA76778| (Y17554) ornithine carbamoyltransferase [Baci... 400 e-110
sp|O08322|OTCA_LACPL ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 399 e-110
gi|2697114 (AF008219) ArcB [Borrelia afzelii] 308 5e-83
gi|2688788 (AE001183) ornithine carbamoyltransferase, catab... 305 3e-82
sp|Q46169|OTCC_CLOPE ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 298 3e-80
sp|P08308|OTCC_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 290 1e-77
pdb|1ORT|A Chain A, Ornithine Transcarbamoylase From Pseudo... 287 6e-77
sp|P44770|OTCC_HAEIN ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 287 1e-76
pdb|1AKM|A Chain A, Ornithine Transcarbamylase From Escheri... 286 1e-76
sp|P04391|OTC1_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN I... 286 1e-76
pdb|2OTC|A Chain A, Ornithine Transcarbamoylase Complexed W... 286 2e-76
sp|O31018|OTCC_RHIET ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 286 2e-76
gb|AAD32177.1|AF125563_2 (AF125563) ornithine carbomyltrans... 285 3e-76
sp|P06960|OTC2_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN F... 282 2e-75
pir||OWECF ornithine carbamoyltransferase (EC 2.1.3.3) chai... 282 4e-75
gi|4102008 (AF007428) ornithine carbamoyltransferase homolo... 281 5e-75
sp|P21302|OTCC_NEIGO ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 280 1e-74
emb|CAA25037| (X00210) coding sequence argI gene [Escherich... 277 1e-73
sp|P23752|OTCC_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEO... 273 1e-72
prf||1707278A Orn carbamoyltransferase [Pseudomonas syringa... 272 3e-72
emb|CAA39136.1| (X55520) phaseolotoxin-insensitive ornithin... 271 5e-72
sp|P96108|OTCA_THEMA ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 268 4e-71
sp|P75473|OTCC_MYCPN ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 237 9e-62
sp|Q01322|OTCC_NEICI ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 225 5e-58
sp|P31326|OTC_RANCA ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 224 6e-58
gi|4218929 (AF065629) ornithine transcarbamylase precursor ... 224 8e-58
emb|CAA26007| (X01976) OTCase precursor [Rattus norvegicus] 224 1e-57
sp|P00481|OTC_RAT ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR ... 223 1e-57
ref|NP_032795.1|| ornithine transcarbamylase >gi|129277|sp|... 223 1e-57
sp|O19072|OTC_PIG ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR ... 222 2e-57
pir||S24734 ornithine carbamoyltransferase (EC 2.1.3.3) - N... 222 3e-57
emb|CAA46078| (X64866) ornithine carbamoyltransferase [Neis... 222 4e-57
sp|Q01323|OTCC_NEIFL ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 222 4e-57
emb|CAA46074| (X64862) ornithine carbamoyltransferase [Neis... 221 6e-57
gi|205892 (K00001) preornithine carbamoyl transferase [Ratt... 221 7e-57
sp|Q01325|OTCC_NEIME ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 221 7e-57
emb|CAA30121| (X07092) ornithine transcarbamylase [Mus musc... 220 1e-56
sp|Q01326|OTCC_NEIMU ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 219 2e-56
prf||1403355A Orn transcarbamylase [Homo sapiens] 219 4e-56
ref|NP_000522.1|| ornithine carbamoyltransferase >gi|400687... 219 4e-56
pdb|1OTH|A Chain A, Crystal Structure Of Human Ornithine Tr... 218 6e-56
emb|CAA46072| (X64860) ornithine carbamoyltransferase [Neis... 216 2e-55
sp|O93656|OTC_PYRAB ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 216 2e-55
emb|CAA67609| (X99225) ornithine carbamoyltransferase [Pyro... 216 2e-55
sp|Q01327|OTCC_NEIPO ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 215 3e-55
pdb|1A1S| Ornithine Carbamoyltransferase From Pyrococcus ... 214 7e-55
gi|4185289 (AF083209) ornithine carbamoyltransferase [Pyroc... 214 9e-55
sp|O58457|OTC_PYRHO ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 213 1e-54
sp|Q51742|OTC_PYRFU ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 213 2e-54
gi|189407 (K02100) ornithine transcarbamylase [Homo sapiens] 212 4e-54
sp|O29013|OTC_ARCFU ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 211 6e-54
sp|Q01324|OTCC_NEILA ORNITHINE CARBAMOYLTRANSFERASE, CATABO... 211 6e-54
sp|P18186|OTCA_BACSU ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 210 1e-53
sp|Q58291|OTC_METJA ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 207 9e-53
emb|CAA11624| (AJ223893) argF [Neisseria sicca] 205 4e-52
dbj|BAA81002.1| (AP000063) 402aa long hypothetical ornithin... 204 1e-51
emb|CAA11621| (AJ223890) argF [Neisseria cinerea] >gi|34259... 204 1e-51
emb|CAA11617| (AJ223886) argF [Neisseria lactamica] 203 1e-51
emb|CAA11625| (AJ223894) argF [Neisseria flava] 203 2e-51
emb|CAA11635| (AJ223904) argF [Neisseria animalis] 203 2e-51
emb|CAA11636| (AJ223905) argF [Neisseria pharyngis] 202 3e-51
emb|CAA11619| (AJ223888) argF [Neisseria meningitidis] >gi|... 202 4e-51
emb|CAA11618| (AJ223887) argF [Neisseria lactamica] 201 7e-51
emb|CAA71828| (Y10878) argF [Neisseria polysaccharea] 201 7e-51
emb|CAA11628| (AJ223897) argF [Neisseria perflava] 200 1e-50
sp|O27495|OTC_METTH ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 200 1e-50
emb|CAB73250.1| (AL139076) ornithine carbamoyltransferase [... 200 2e-50
emb|CAA71831| (Y10881) argF [Neisseria polysaccharea] 200 2e-50
emb|CAA11626| (AJ223895) argF [Neisseria subflava] 199 2e-50
emb|CAA11627| (AJ223896) argF [Neisseria mucosa] 199 3e-50
gi|3912936 (U43091) ornithine carbamoyltransferase [Bacillu... 198 8e-50
sp|P31317|OTC_SCHPO ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 197 1e-49
emb|CAA11633| (AJ223902) argF [Neisseria elongata] >gi|3421... 196 2e-49
emb|CAA71829| (Y10879) argF [Neisseria polysaccharea] >gi|1... 196 2e-49
emb|CAA11614| (AJ223883) argF [Neisseria perflava] 196 3e-49
emb|CAA11630| (AJ223899) argF [Neisseria elongata] 194 7e-49
emb|CAA71827| (Y10877) argF [Neisseria lactamica] 194 7e-49
emb|CAA11616| (AJ223885) argF [Neisseria lactamica] 194 1e-48
gb|AAF17705.1|AF033562_1 (AF033562) ornithine carbamoyltran... 193 2e-48
emb|CAA11615| (AJ223884) argF [Neisseria lactamica] 193 2e-48
emb|CAA11629| (AJ223898) argF [Neisseria elongata] 193 2e-48
emb|CAA11631| (AJ223900) argF [Neisseria elongata] 192 3e-48
sp|Q43814|OTC_PEA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR ... 192 5e-48
emb|CAA11632| (AJ223901) argF [Neisseria elongata] 191 8e-48
emb|CAA71826| (Y10876) argF [Neisseria lactamica] 190 1e-47
dbj|BAA22924| (D86376) ArgF [Bacillus subtilis] 185 4e-46
gb|AAF17704.1|AF033561_1 (AF033561) ornithine carbamoyltran... 185 6e-46
sp|Q55497|OTCA_SYNY3 ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 183 1e-45
dbj|BAA04509.1| (D17585) ornithine transcarbamylase [Mycopl... 182 3e-45
gb|AAF09673.1|AE001871_5 (AE001871) ornithine carbamoyltran... 182 5e-45
sp|P96134|OTCA_THETH ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 180 2e-44
gi|3617827 (AF030524) ornithine carbamoyltransferase; OCT [... 178 4e-44
sp|P11724|OTCA_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 178 4e-44
sp|Q02095|OTCA_MYCBO ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 177 1e-43
sp|P94991|OTCA_MYCTU ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 176 2e-43
sp|Q08016|OTC1_SALTY ORNITHINE CARBAMOYLTRANSFERASE CHAIN I... 176 2e-43
sp|P96172|OTCA_VIBS2 ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 175 7e-43
pir||OWBY ornithine carbamoyltransferase (EC 2.1.3.3) - yea... 173 2e-42
ref|NP_012447.1|ARG3| Ornithine carbamoyltransferase; Arg3p... 173 2e-42
emb|CAA66276| (X97684) ornithine carbamoyl transferase [Clo... 173 3e-42
dbj|BAA35119| (AB020737) ornithine carbamoyltransferase [As... 170 2e-41
sp|P11066|OTC_ASPNG ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 169 4e-41
sp|Q02047|OTCA_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEO... 169 4e-41
sp|Q00291|OTC_ASPTE ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 167 1e-40
sp|O50039|OTC_ARATH ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 166 2e-40
sp|Q59283|OTCA_CORGL ORNITHINE CARBAMOYLTRANSFERASE, ANABOL... 166 2e-40
gi|2984023 (AE000752) ornithine carbamoyltransferase [Aquif... 166 2e-40
pir||OWASN ornithine carbamoyltransferase (EC 2.1.3.3) prec... 166 2e-40
sp|P11803|OTC_EMENI ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 166 2e-40
sp|P14995|OTC_PACTA ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 163 2e-39
dbj|BAA05061| (D26062) ornithine carbamoyltransferase [Cori... 158 5e-38
sp|P78605|OTC_CORHI ORNITHINE CARBAMOYLTRANSFERASE PRECURSO... 158 5e-38
sp|Q48296|OTC_HALSA ORNITHINE CARBAMOYLTRANSFERASE (OTCASE)... 152 5e-36
sp|P16964|OTCX_STRPY PROBABLE ORNITHINE CARBAMOYLTRANSFERAS... 140 1e-32
gi|3399775 (AF069576) ornithine carbamoyltransferase [Giard... 120 1e-26
emb|CAA60100| (X86157) ornithine carbamoyltransferase [Cory... 104 1e-21
sp|O58451|PYRB_PYRHO ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 90 2e-17
sp|P77918|PYRB_PYRAB ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 88 9e-17
sp|Q91437|PYR1_SQUAC CAD PROTEIN [INCLUDES: GLUTAMINE-DEPEN... 80 3e-14
ref|NP_004332.1|| carbamoyl-phosphate synthetase 2, asparta... 77 2e-13
pir||A36240 pyrimidine synthesis protein CAD - human (fragm... 77 2e-13
gi|2625102 (AF031144) aspartate transcarbamoylase [Plasmodi... 76 4e-13
sp|P08955|PYR1_MESAU CAD PROTEIN [INCLUDES: GLUTAMINE-DEPEN... 76 4e-13
gi|387068 (M23652) CAD protein [Mesocricetus auratus] 76 4e-13
pir||QZDOP3 pyrimidine synthesis protein PYR1-3 - slime mol... 75 1e-12
sp|P20054|PYR1_DICDI PROTEIN PYR1-3 [INCLUDES: GLUTAMINE-DE... 75 1e-12
emb|CAA32782| (X14634) PYR1-3B multifunctional enzyme (1014... 75 1e-12
sp|O66726|PYRB_AQUAE ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 74 2e-12
sp|Q58976|PYRB_METJA ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 72 8e-12
sp|Q55338|PYRB_SULSO ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 71 1e-11
gb|AAC96537.1| (U42580) contains carbamyltransferase motif;... 70 3e-11
ref|NP_012405.1|URA2| carbamoyl-phophate synthetase, aspart... 69 4e-11
emb|CAA60825| (X87371) carbamyl phosphate synthetase [Sacch... 69 4e-11
gi|173146 (M27174) carbamyl phosphate synthetase [Saccharom... 69 5e-11
gi|2827897 (AF018428) aspartate carbamoyltransferase; ACTas... 68 9e-11
sp|O25716|PYRB_HELPY ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 68 9e-11
gi|191173 (M33702) dihydroorotase synthetase complex (EC 3.... 66 4e-10
emb|CAB57686.1| (Y18930) aspartate carbamoyltransferase cat... 66 6e-10
sp|Q9ZM81|PYRB_HELPJ ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 66 6e-10
sp|Q46803|YGEW_ECOLI HYPOTHETICAL 40.2 KD PROTEIN IN KDUI-L... 65 8e-10
emb|CAB73353.1| (AL139077) aspartate carbamoyltransferase [... 64 2e-09
gi|4185560 (AF112473) PyrABCN [Emericella nidulans] 64 2e-09
dbj|BAA80664.1| (AP000062) 312aa long hypothetical aspartat... 62 7e-09
gi|173144 (J04711) carbamylase phosphate synthetase-asparta... 62 9e-09
dbj|BAA22792| (AB007852) aspartate carbamoyltransferase [Tr... 59 7e-08
dbj|BAA74525.1| (AB017765) ACTase [Trypanosoma cruzi] 58 1e-07
pir||C33917 pyrimidine synthesis protein CAD - Chinese hams... 55 1e-06
gb|AAF10682.1|AE001961_1 (AE001961) aspartate carbamoyltran... 53 3e-06
sp|Q43087|PYB2_PEA ASPARTATE CARBAMOYLTRANSFERASE 2 PRECURS... 50 2e-05
sp|Q43064|PYB3_PEA ASPARTATE CARBAMOYLTRANSFERASE 3 PRECURS... 49 5e-05
sp|Q59711|PYRB_PSEPU ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 45 0.001
sp|Q59653|PYRB_PSEAE ASPARTATE CARBAMOYLTRANSFERASE (ASPART... 43 0.005
emb|CAA04683| (AJ001330) ornithine transcarbamoylase [Lactobacillus sakei]
Length = 337
Score = 422 bits (1074), Expect = e-117
Identities = 208/333 (62%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 1 MFQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXX 60
+FQGRS L E DF+K EL YLIDF++HLK LKK+ I H YL KNIAL+FEK S
Sbjct: 5 VFQGRSLLAEKDFTKSELEYLIDFSLHLKDLKKKGIPHHYLEGKNIALLFEKNSTRTRAA 64
Query: 61 XXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSG 120
+DLGAHPEFLG NDIQLGKKES+ DTAKVLGSMFDGIEFR + VE LAK SG
Sbjct: 65 FTTAAIDLGAHPEFLGKNDIQLGKKESVEDTAKVLGSMFDGIEFRALAKV-VEDLAKYSG 123
Query: 121 RPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNI 180
PVWNGLTD WHPTQM+ADFMT+KE+FG L+ +TL YVGDGRNN+ANSLLVTG++LGVNI
Sbjct: 124 VPVWNGLTDEWHPTQMIADFMTVKENFGKLKGVTLTYVGDGRNNMANSLLVTGSMLGVNI 183
Query: 181 TIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTA 239
I++P+SLQP E++ LA YA ++ SK I +D++ G++ +D++YTDVWVSMGEE +
Sbjct: 184 HIVAPDSLQPTQEVRDLAEGYAKETGSKNMITSDVDAGVKGSDVLYTDVWVSMGEEDKFE 243
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
+R+ LLK YQIN +V+K N+N I MHCLP+FHD+ TE K+I E + + E+E+TDE F
Sbjct: 244 ERVNLLKPYQINMDMVKKTGNENMIIMHCLPAFHDIETEYGKKIDEQFGIQEMEITDEAF 303
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGDLFIPK 332
SK + FE+AENRMH+IK +MAATLG+LFIP+
Sbjct: 304 RSKYARQFEEAENRMHSIKAIMAATLGNLFIPQ 336
emb|CAA76778| (Y17554) ornithine carbamoyltransferase [Bacillus licheniformis]
Length = 335
Score = 400 bits (1016), Expect = e-110
Identities = 196/327 (59%), Positives = 250/327 (75%), Gaps = 1/327 (0%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GRS+L E DFS++E+LYL+D A LK+ K + I+H+YL KNIAL+FEK S
Sbjct: 8 KGRSYLAEKDFSEEEILYLLDLAQKLKEKKAQGIRHRYLEGKNIALLFEKPSTRTRCAFT 67
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+DLGAHPE+LG +DIQLGKKESI DTAKVLG MFDGIEFRGF+ V LA+ SG P
Sbjct: 68 TACIDLGAHPEYLGKDDIQLGKKESIEDTAKVLGRMFDGIEFRGFEHEKVISLAEHSGVP 127
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
VWNGLTD+WHPTQMLADFMT+KEH G ++ + L Y+GDGRNNVANSLL+ GA +G+++ I
Sbjct: 128 VWNGLTDLWHPTQMLADFMTVKEHTGRVKGVKLTYIGDGRNNVANSLLIGGAKVGMDVRI 187
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKR 241
SP+ L P +I K+A +A +S KI++ +D + + AD++YTDVWVSMGEE + A+R
Sbjct: 188 CSPQELFPDQDIVKMAEAFAEESGGKITVTSDTDKAVSGADVLYTDVWVSMGEEDKFAER 247
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
IKLLK YQ+N +V+K N N IF+HCLP+FHDL+T + + E + L E+EVTDEVF S
Sbjct: 248 IKLLKPYQVNMDLVKKTGNDNVIFLHCLPAFHDLHTTYGQNVYEQHGLKEMEVTDEVFRS 307
Query: 302 KNSVVFEQAENRMHTIKEVMAATLGDL 328
K+S VF++AENRMHTIK VMAATLGDL
Sbjct: 308 KHSKVFDEAENRMHTIKAVMAATLGDL 334
sp|O08322|OTCA_LACPL ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|1922883|emb|CAA68243.1| (X99978) anabolic ornithine
carbamoyltransferase [Lactobacillus plantarum]
Length = 340
Score = 399 bits (1013), Expect = e-110
Identities = 201/331 (60%), Positives = 242/331 (72%), Gaps = 1/331 (0%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GRSFLKEID++ EL YLIDFA HLK LK HI H YL KNIAL+FEKTS
Sbjct: 5 FEGRSFLKEIDYTPTELAYLIDFASHLKTLKAHHIPHPYLQGKNIALLFEKTSTRTRSAF 64
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
DLGA+PEFLG +DIQ G KES+ DTAKVLGSM+DGIEFRGFKQS VE LA SG
Sbjct: 65 TVAANDLGANPEFLGKDDIQFGTKESVVDTAKVLGSMYDGIEFRGFKQSTVEDLATYSGV 124
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
PVWNGLTD WHPTQ+LADF+T+KEHFGHL+ LTLAYVGDGRNN+ANSLLV GA+LG+NI
Sbjct: 125 PVWNGLTDEWHPTQILADFLTLKEHFGHLKGLTLAYVGDGRNNMANSLLVAGAMLGINIA 184
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
I +P +LQPA + LA++YA + S + I D + AD +YTDVWVSMGE+ +
Sbjct: 185 IGAPVALQPAPAVVALAQQYAQAAGSTVVITADPQQAVTQADALYTDVWVSMGEQVDYGE 244
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
RIK L +QIN ++ + I MHCLP+ HDL T++ ++ E Y + E+TD+VF
Sbjct: 245 RIKQLLPFQINTTLLAATGKSSTIVMHCLPALHDLKTQLGAKLGEQYGMTAFEITDDVFQ 304
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGDLFIP 331
SK +VVFE+A NRM IK VMAATLG+LFIP
Sbjct: 305 SKQAVVFEEAGNRMPAIKAVMAATLGNLFIP 335
gi|2697114 (AF008219) ArcB [Borrelia afzelii]
Length = 328
Score = 308 bits (780), Expect = 5e-83
Identities = 162/325 (49%), Positives = 219/325 (66%), Gaps = 2/325 (0%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ RSFL +DF+ ++ YL+D +I LKK K I+ + L KNI +IFEK S
Sbjct: 5 RNRSFLNLLDFTSKDIKYLLDLSIDLKKSKYAGIEVQKLKGKNIVIIFEKDSTRTRCAFE 64
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA+ +LGP Q+G KES+ DTA+VLG M+D I FRGF Q VE LA S P
Sbjct: 65 IAAYDQGANITYLGPKGNQIGVKESMKDTARVLGRMYDAIGFRGFSQETVECLANYSNVP 124
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V+NGLTD+ HPTQ+LAD MTIKEH G L+ + + + GDGR N+ANSLL AI+G++ I
Sbjct: 125 VYNGLTDISHPTQILADLMTIKEHKGSLKGIKIVFCGDGRGNIANSLLKGCAIMGLDFRI 184
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIR-TDLNGLENADIVYTDVWVSMGEEAQTAKR 241
+P+ L P + A+ A+KS KI+I + ++ AD+VYTDVWVSMGEE+ R
Sbjct: 185 FAPKELFPDSNLTLKAKSLALKSGGKITITDSKEEAVKCADVVYTDVWVSMGEESNWEDR 244
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I LLK YQ+N++++ + + IFMHCLP+FHDL+T V ++I + Y L+ +EVT+E+F S
Sbjct: 245 INLLKLYQVNKELM-CMAKDDAIFMHCLPAFHDLSTVVGRDIFDKYGLDGIEVTEEIFES 303
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
KNSVVF+ AENR+H IK VM +TLG
Sbjct: 304 KNSVVFDVAENRVHAIKAVMVSTLG 328
gi|2688788 (AE001183) ornithine carbamoyltransferase, catabolic (arcB)
[Borrelia burgdorferi]
Length = 328
Score = 305 bits (774), Expect = 3e-82
Identities = 162/325 (49%), Positives = 221/325 (67%), Gaps = 3/325 (0%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ RSFL +DF+ ++ YL+D +I+LKK K I+ + L KNI +IFEK S
Sbjct: 6 RNRSFLNLLDFTSKDIKYLLDLSINLKKSKYAGIEVQKLKGKNIVIIFEKDSTRTRCAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA+ +LG Q+G KES+ DTA+VLG M+D I FRGF Q VE LA S P
Sbjct: 66 IAAYDQGANITYLGSKGNQMGSKESMIDTARVLGRMYDAIGFRGFSQQTVECLANYSNVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V+NGLTD+ HPTQ+LAD MTIKEH G L+ + + + GDGR NVANSLL AI+G++ I
Sbjct: 126 VYNGLTDISHPTQILADLMTIKEHKGSLKGIKIVFCGDGRGNVANSLLKGCAIMGLDFRI 185
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIR-TDLNGLENADIVYTDVWVSMGEEAQTAKR 241
+P+ L P ++ AR A++S KI+I + ++ AD+VYTDVWVSMG E+ R
Sbjct: 186 FAPKELFPDPDLTLKARSLALESGGKITITDSKEEAVKCADVVYTDVWVSMG-ESNWEDR 244
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I LLK+YQ+N++++ + + IFMHCLP+FHDLNT + K+I + Y L+ +EVT+E+F S
Sbjct: 245 INLLKAYQVNKEIM-CMAKDDAIFMHCLPAFHDLNTVIGKDIFDKYGLDGIEVTEEIFES 303
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
KNSVVF+ AENR+HTIK +M +TLG
Sbjct: 304 KNSVVFDVAENRVHTIKAIMVSTLG 328
sp|Q46169|OTCC_CLOPE ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|1321787|emb|CAA66365| (X97768) ornithine carbamoyl
transferase [Clostridium perfringens]
Length = 331
Score = 298 bits (756), Expect = 3e-80
Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 5/327 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GRSFL DF+ E+ YL+D + LK K+ I L KN+ L+FEKTS
Sbjct: 6 KGRSFLTLKDFTPAEIRYLLDLSHDLKAKKRAGILGDSLKGKNVVLLFEKTSTRTRCAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ GAH FL + Q+GKKESI DTAKVLG M+DGIEFRGFKQS VE LAK +G P
Sbjct: 66 CGAAEEGAHVTFL--TNSQMGKKESIEDTAKVLGRMYDGIEFRGFKQSTVEELAKHAGVP 123
Query: 123 VWNGLTDVWHPTQMLADFMTIKEH-FGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
VWNGLTD HPTQ+LADF+TI+EH L + L + G RNN++ +L+ A +G++
Sbjct: 124 VWNGLTDADHPTQILADFLTIEEHAHKPLSAIKLVFTGHTRNNMSYALMYGAAKMGMHFV 183
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGE-EAQTA 239
+ P+SL+P +I K ++Y+ ++ + I ++++ ++ AD++YTD+WVSMGE E+
Sbjct: 184 ALGPDSLKPDEDILKEMQEYSKETGATIEFSSNVDEAVKGADVIYTDIWVSMGEDESLYP 243
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
+R+KLL Y++ ++++ K NKN +FMHCLPSFHD +TEV K+ + L+ EV DEVF
Sbjct: 244 ERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDRWIDLGLDIREVEDEVF 303
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLG 326
SKNSVVF++AENRMHTIK VM AT G
Sbjct: 304 RSKNSVVFDEAENRMHTIKAVMVATAG 330
sp|P08308|OTCC_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|279494|pir||OWPSCA ornithine carbamoyltransferase
(EC 2.1.3.3), catabolic - Pseudomonas aeruginosa
>gi|45288|emb|CAA29124| (X05637) arcB (AA 1-336)
[Pseudomonas aeruginosa]
Length = 336
Score = 290 bits (735), Expect = 1e-77
Identities = 156/329 (47%), Positives = 219/329 (66%), Gaps = 5/329 (1%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R+ L + S EL YL+D + LK+ K + ++L KNIALIFEKTS
Sbjct: 8 RNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVA 67
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
D GA+ ++ PN Q+G KES+ DTA+VLG M+D IE+RGFKQ VE LAK +G PV+
Sbjct: 68 AYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVF 127
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD +HPTQMLAD +T++EH L D++ AY+GD RNN+ NSLL+ GA LG+++ I
Sbjct: 128 NGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIA 187
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKR 241
+P++L P E +K+A +S +K+++ D ++ D V+TDVWVSMGE + +R
Sbjct: 188 APKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGER 247
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY-NL-NELEVTDEVF 299
IK L YQ+N ++++ N FMHCLP+FH+ T+V K+I E Y NL N +EVT++VF
Sbjct: 248 IKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVF 307
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGDL 328
S ++ FEQAENRMHTIK ++ +TL D+
Sbjct: 308 ESPYNIAFEQAENRMHTIKAILVSTLADI 336
pdb|1ORT|A Chain A, Ornithine Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943015|pdb|1ORT|B Chain B, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943016|pdb|1ORT|C Chain C, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943017|pdb|1ORT|D Chain D, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943018|pdb|1ORT|E Chain E, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943019|pdb|1ORT|F Chain F, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943020|pdb|1ORT|G Chain G, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943021|pdb|1ORT|H Chain H, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943022|pdb|1ORT|I Chain I, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943023|pdb|1ORT|J Chain J, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943024|pdb|1ORT|K Chain K, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
>gi|1943025|pdb|1ORT|L Chain L, Ornithine
Transcarbamoylase From Pseudomonas Aeruginosa
Length = 335
Score = 287 bits (728), Expect = 6e-77
Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 5/329 (1%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R+ L + S EL YL+D + LK+ K + ++L KNIALIFEKTS
Sbjct: 7 RNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVA 66
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
D GA+ ++ PN Q+G KES+ DTA+VLG M+D I +RGFKQ VE LAK +G PV+
Sbjct: 67 AYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIGYRGFKQEIVEELAKFAGVPVF 126
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD +HPTQMLAD +T++EH L D++ AY+GD RNN+ NSLL+ GA LG+++ I
Sbjct: 127 NGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIA 186
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKR 241
+P++L P E +K+A +S +K+++ D ++ D V+TDVWVSMGE + +R
Sbjct: 187 APKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGER 246
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY-NL-NELEVTDEVF 299
IK L YQ+N ++++ N FMHCLP+FH+ T+V K+I E Y NL N +EVT++VF
Sbjct: 247 IKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVF 306
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGDL 328
S ++ FEQAENRMHTIK ++ +TL D+
Sbjct: 307 ESPYNIAFEQAENRMHTIKAILVSTLADI 335
sp|P44770|OTCC_HAEIN ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|1075091|pir||H64079 ornithine carbamoyltransferase
(arcB) homolog - Haemophilus influenzae (strain Rd KW20)
>gi|1573585 (U32741) ornithine carbamoyltransferase
(arcB) [Haemophilus influenzae Rd]
Length = 334
Score = 287 bits (726), Expect = 1e-76
Identities = 150/328 (45%), Positives = 217/328 (65%), Gaps = 5/328 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R L + ++ E+ YL+D + LK+ K + + L KNIALIFEKTS
Sbjct: 6 KNRHLLSLVHHTEREIKYLLDLSRDLKRAKYAGTEQQKLKGKNIALIFEKTSTRTRCAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA ++ PN Q+G KES+ DTA+VLG M+DGIE+RGFKQS V+ LA +G P
Sbjct: 66 VAAYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDGIEYRGFKQSIVQELADYAGVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
V+NGLTD +HPTQMLAD +T+ EH L +++ Y+GD RNN+ NSLL+ GA LG+++
Sbjct: 126 VFNGLTDEFHPTQMLADVLTMIEHCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVR 185
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-A 239
I P++L P + ++ K+A +S ++I++ D++ ++ D ++TDVWVSMGE +T
Sbjct: 186 ICGPKALLPEANLVEMCEKFAKESGARITVTEDIDKAVKGVDFIHTDVWVSMGEPLETWG 245
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN--LNELEVTDE 297
+RIKLL YQ+ +++++ N FMHCLP+FH+ T+V ++I E Y N +EVT+E
Sbjct: 246 ERIKLLLPYQVTPELMKRTGNPKVKFMHCLPAFHNSETKVGRQIAEKYPELANGIEVTEE 305
Query: 298 VFNSKNSVVFEQAENRMHTIKEVMAATL 325
VF S ++ FEQAENRMHTIK VM A+L
Sbjct: 306 VFESPMNIAFEQAENRMHTIKAVMVASL 333
pdb|1AKM|A Chain A, Ornithine Transcarbamylase From Escherichia Coli
>gi|3212449|pdb|1AKM|B Chain B, Ornithine
Transcarbamylase From Escherichia Coli
>gi|3212450|pdb|1AKM|C Chain C, Ornithine
Transcarbamylase From Escherichia Coli >gi|145344
(J02842) ornithine transcarbamoylase (argI; EC 2.1.3.3)
[Escherichia coli]
Length = 333
Score = 286 bits (725), Expect = 1e-76
Identities = 152/329 (46%), Positives = 212/329 (64%), Gaps = 5/329 (1%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F + FLK +DF+ EL L+ A LK KK + L KNIALIFEK S
Sbjct: 3 FYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSF 62
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG+ Q VE LA+ +
Sbjct: 63 EVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASV 122
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVN 179
PVWNGLT+ +HPTQ+LAD +T++EH ++TL Y GD RNN+ NS+L A+ G++
Sbjct: 123 PVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLD 182
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGE-EAQ 237
+ +++P++ P + R A ++ I++ D+ G+E AD +YTDVWVSMGE + +
Sbjct: 183 LRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEK 242
Query: 238 TAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTD 296
A+RI LL+ YQ+N K+++ N F+HCLP+FHD T + K++ E + L+ +EVTD
Sbjct: 243 WAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTD 302
Query: 297 EVFNSKNSVVFEQAENRMHTIKEVMAATL 325
EVF S S+VF+QAENRMHTIK VM ATL
Sbjct: 303 EVFESAASIVFDQAENRMHTIKAVMVATL 331
sp|P04391|OTC1_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN I (OTCASE-1)
>gi|66492|pir||OWECI ornithine carbamoyltransferase (EC
2.1.3.3) chain I - Escherichia coli >gi|537095 (U14003)
ornithine carbamoyltransferase [Escherichia coli]
>gi|1790703 (AE000496) ornithine carbamoyltransferase 1
[Escherichia coli]
Length = 334
Score = 286 bits (725), Expect = 1e-76
Identities = 152/329 (46%), Positives = 212/329 (64%), Gaps = 5/329 (1%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F + FLK +DF+ EL L+ A LK KK + L KNIALIFEK S
Sbjct: 4 FYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSF 63
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG+ Q VE LA+ +
Sbjct: 64 EVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASV 123
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVN 179
PVWNGLT+ +HPTQ+LAD +T++EH ++TL Y GD RNN+ NS+L A+ G++
Sbjct: 124 PVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLD 183
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGE-EAQ 237
+ +++P++ P + R A ++ I++ D+ G+E AD +YTDVWVSMGE + +
Sbjct: 184 LRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEK 243
Query: 238 TAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTD 296
A+RI LL+ YQ+N K+++ N F+HCLP+FHD T + K++ E + L+ +EVTD
Sbjct: 244 WAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTD 303
Query: 297 EVFNSKNSVVFEQAENRMHTIKEVMAATL 325
EVF S S+VF+QAENRMHTIK VM ATL
Sbjct: 304 EVFESAASIVFDQAENRMHTIKAVMVATL 332
pdb|2OTC|A Chain A, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318808|pdb|2OTC|B
Chain B, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318809|pdb|2OTC|C
Chain C, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318810|pdb|2OTC|D
Chain D, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318811|pdb|2OTC|E
Chain E, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318812|pdb|2OTC|F
Chain F, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318813|pdb|2OTC|G
Chain G, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318814|pdb|2OTC|H
Chain H, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine >gi|3318815|pdb|2OTC|I
Chain I, Ornithine Transcarbamoylase Complexed With
N-(Phosphonacetyl)-L-Ornithine
Length = 333
Score = 286 bits (723), Expect = 2e-76
Identities = 152/329 (46%), Positives = 212/329 (64%), Gaps = 5/329 (1%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F + FLK +DF+ EL L+ A LK KK + L KNIALIFEK S
Sbjct: 3 FYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSF 62
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG+ Q VE LA+ +
Sbjct: 63 EVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYARV 122
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVN 179
PVWNGLT+ +HPTQ+LAD +T++EH ++TL Y GD RNN+ NS+L A+ G++
Sbjct: 123 PVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLD 182
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGE-EAQ 237
+ +++P++ P + R A ++ I++ D+ G+E AD +YTDVWVSMGE + +
Sbjct: 183 LRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEK 242
Query: 238 TAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTD 296
A+RI LL+ YQ+N K+++ N F+HCLP+FHD T + K++ E + L+ +EVTD
Sbjct: 243 WAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTD 302
Query: 297 EVFNSKNSVVFEQAENRMHTIKEVMAATL 325
EVF S S+VF+QAENRMHTIK VM ATL
Sbjct: 303 EVFESAASIVFDQAENRMHTIKAVMVATL 331
sp|O31018|OTCC_RHIET ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE) >gi|2555171
(AF025543) ArcB; catabolic ornithine
carbamoyltransferase; cOTCase [Rhizobium etli]
Length = 334
Score = 286 bits (723), Expect = 2e-76
Identities = 151/329 (45%), Positives = 213/329 (63%), Gaps = 4/329 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ RS L D++ E YL+D A LK+ K + ++L K I LIFEKTS
Sbjct: 6 RNRSLLTVQDYTPREFRYLLDLARDLKRAKYARTEQEHLKGKEICLIFEKTSTRTRCAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA+ +L P+ Q+G KES DTA+VLG M+D IE+RG Q VE LAK +G P
Sbjct: 66 VACSDQGANVTYLDPSGSQIGHKESFKDTARVLGRMYDAIEYRGSAQKGVETLAKYAGVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
V+NGLTD +HPTQM+AD MT++EH + ++ AYVGD R+N+ +SLL+ G +LG+++
Sbjct: 126 VYNGLTDEYHPTQMIADVMTMREHSDKPIAEIKYAYVGDTRSNMGHSLLIVGCLLGMDVR 185
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-A 239
I P SL P+ E K+A+ S +++ + D +++ D ++TDVWVSMGE +
Sbjct: 186 ICGPRSLWPSEEYMKIAKVLQQASGARLLVTEDPREAVKDVDFIHTDVWVSMGEPKEVWR 245
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNL-NELEVTDEV 298
+RIKLL YQ+NQ +++ N FMHCLP+FHD T + K+I E+Y + N LEVT++V
Sbjct: 246 ERIKLLTPYQVNQDLMKATGNPQTKFMHCLPAFHDTETTLGKQIAEDYGMDNGLEVTNDV 305
Query: 299 FNSKNSVVFEQAENRMHTIKEVMAATLGD 327
F S+ +V FEQAENR+HTIK ++ ATLGD
Sbjct: 306 FESEANVAFEQAENRLHTIKALLVATLGD 334
gb|AAD32177.1|AF125563_2 (AF125563) ornithine carbomyltransferase [Neisseria meningitidis]
Length = 331
Score = 285 bits (722), Expect = 3e-76
Identities = 157/328 (47%), Positives = 214/328 (64%), Gaps = 3/328 (0%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R FLK +DF+ +E+ +D A LK KK + + + KNIALIFEKTS
Sbjct: 4 KNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKGKNIALIFEKTSTRTRCAFE 63
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G P
Sbjct: 64 VAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVP 123
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
V+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL+ GA LG+++
Sbjct: 124 VFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVR 183
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-A 239
I +P+SL P+ I A A ++ +KI++ + + ++N D ++TDVWVSMGE +
Sbjct: 184 IGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQ 243
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
+RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT+EVF
Sbjct: 244 ERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTEEVF 303
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF+QAENRMHTIK VM A LGD
Sbjct: 304 ESPASIVFDQAENRMHTIKAVMVAALGD 331
sp|P06960|OTC2_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN F (OTCASE-2) >gi|1552842
(U70214) OTCase [Escherichia coli] >gi|1786469
(AE000135) ornithine carbamoyltransferase 2, chain F
[Escherichia coli]
Length = 334
Score = 282 bits (715), Expect = 2e-75
Identities = 151/328 (46%), Positives = 213/328 (64%), Gaps = 5/328 (1%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ FLK +DF+ + L+ A LK KK + + L KNIALIFEK S
Sbjct: 7 KHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLTGKNIALIFEKDSTRTRCSFEVA 66
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG Q VE LA+ +G PVW
Sbjct: 67 AFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQYAGVPVW 126
Query: 125 NGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
NGLT+ +HPTQ+LAD MT++EH ++TL Y GD RNN+ NS+L A+ G+++ +
Sbjct: 127 NGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRL 186
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGE-EAQTAK 240
++P++ P + A K KI++ D+ G++ AD +YTDVWVSMGE + + A+
Sbjct: 187 LAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEAKEKWAE 246
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTDEVF 299
RI LL+ YQ+N +++ N N F+HCLP+FHD T + K++ + ++L+ +EVTDEVF
Sbjct: 247 RIALLRGYQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVF 306
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF+QAENRMHTIK VM ATLG+
Sbjct: 307 ESAASIVFDQAENRMHTIKAVMMATLGE 334
pir||OWECF ornithine carbamoyltransferase (EC 2.1.3.3) chain F - Escherichia
coli >gi|40960|emb|CAA25329| (X00759) OTCase
[Escherichia coli]
Length = 334
Score = 282 bits (713), Expect = 4e-75
Identities = 151/328 (46%), Positives = 212/328 (64%), Gaps = 5/328 (1%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ FLK +DF+ + L+ A LK KK + + L KNIALIFEK S
Sbjct: 7 KHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLTGKNIALIFEKDSTRTRCSFEVA 66
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG Q VE LA+ G PVW
Sbjct: 67 AFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQYPGVPVW 126
Query: 125 NGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
NGLT+ +HPTQ+LAD MT++EH ++TL Y GD RNN+ NS+L A+ G+++ +
Sbjct: 127 NGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRL 186
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGE-EAQTAK 240
++P++ P + A K KI++ D+ G++ AD +YTDVWVSMGE + + A+
Sbjct: 187 LAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEAKEKWAE 246
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTDEVF 299
RI LL+ YQ+N +++ N N F+HCLP+FHD T + K++ + ++L+ +EVTDEVF
Sbjct: 247 RIALLRGYQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVF 306
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF+QAENRMHTIK VM ATLG+
Sbjct: 307 ESAASIVFDQAENRMHTIKAVMMATLGE 334
gi|4102008 (AF007428) ornithine carbamoyltransferase homolog [Haemophilus
paragallinarum]
Length = 334
Score = 281 bits (712), Expect = 5e-75
Identities = 149/328 (45%), Positives = 213/328 (64%), Gaps = 5/328 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R L + + E+ +L+ A LK+ K + L KNIALIFEKTS
Sbjct: 6 KNRHLLSLVHHTPQEIQFLLQLAKELKQAKYTGTEQPRLKGKNIALIFEKTSTRTRCSFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA+ ++ PN Q+G KES+ DTA+VLG M+D IE+RGFKQ+ V LA+ +G P
Sbjct: 66 VAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQAVVNELAEYAGVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
V+NGLTD +HPTQMLAD +T+ EH L D+ Y+GD RNN+ NSLL+ GA LG+++
Sbjct: 126 VFNGLTDEFHPTQMLADVLTMMEHSDKPLSDIIYVYIGDARNNMGNSLLLIGAKLGMDVR 185
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-A 239
I +P++LQP E+ + +++A ++ ++I+I D+ ++ D V+TDVWVSMGE ++
Sbjct: 186 ICAPKALQPEAELVAMCQEFAQQTGARITITEDVELAVKGVDFVHTDVWVSMGEPLESWG 245
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN--LNELEVTDE 297
+RI LL YQ+ ++++ N FMHCLP+FH+ TEV K+I E Y N +EVT+E
Sbjct: 246 ERINLLLPYQVTPALMQRSGNPKVKFMHCLPAFHNCETEVGKKIAEKYPHLANGIEVTEE 305
Query: 298 VFNSKNSVVFEQAENRMHTIKEVMAATL 325
VF S ++ F+QAENRMHTIK VM A+L
Sbjct: 306 VFESPMNIAFDQAENRMHTIKAVMVASL 333
sp|P21302|OTCC_NEIGO ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|279493|pir||OWNHG ornithine carbamoyltransferase (EC
2.1.3.3) - Neisseria gonorrhoeae >gi|150241 (M34930)
ornithine transcarbamoylase (argF) (EC 2.1.3.3)
[Neisseria gonorrhoeae]
Length = 331
Score = 280 bits (709), Expect = 1e-74
Identities = 154/328 (46%), Positives = 211/328 (63%), Gaps = 3/328 (0%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R FLK +DF+ +E+ +D A LK KK + + + KNIALIFEKTS
Sbjct: 4 KNRHFLKLLDFTPEEITAYLDLAAELKDAKKAGREIQRMKGKNIALIFEKTSTRTRCAFE 63
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G P
Sbjct: 64 VAARDQGADRTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFAQETVEELAKYAGVP 123
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
V+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL+ GA LG+++
Sbjct: 124 VFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVR 183
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-A 239
I +P+SL P+ I A A ++ +KI++ + + ++ ++TDVWVSMGE +
Sbjct: 184 IGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKGVGFIHTDVWVSMGEPKEVWQ 243
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
+RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT+EVF
Sbjct: 244 ERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTEEVF 303
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLGD 327
S +VF+QAENRMHTIK VM A LGD
Sbjct: 304 ESPAGIVFDQAENRMHTIKAVMVAALGD 331
emb|CAA25037| (X00210) coding sequence argI gene [Escherichia coli]
Length = 334
Score = 277 bits (700), Expect = 1e-73
Identities = 150/329 (45%), Positives = 206/329 (62%), Gaps = 5/329 (1%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F + FLK +DF+ EL L+ A LK KK + L KNIALIFEK S
Sbjct: 4 FYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSF 63
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
D GA +LGP+ Q+G KESI DTA+VLG M+DGI++RG+ Q VE LA+
Sbjct: 64 EVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAQYRSV 123
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVN 179
PVWNGLT+ +HPTQ++ +T++EH ++TL Y GD RNN+ NS+L A+ G++
Sbjct: 124 PVWNGLTNEFHPTQLIEYKLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLD 183
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT 238
+ +++P++ P + R A ++ I++ D+ G+E AD +YTDVWVSMGE Q
Sbjct: 184 LRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKQK 243
Query: 239 -AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLN-ELEVTD 296
A+RI LL YQ+N K+++ N F+HCLP+FHD T + K++ E + L+ +EVTD
Sbjct: 244 WAERIALLAEYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTD 303
Query: 297 EVFNSKNSVVFEQAENRMHTIKEVMAATL 325
EVF S S+VF QAENRMHTIK VM ATL
Sbjct: 304 EVFESAASIVFGQAENRMHTIKAVMVATL 332
sp|P23752|OTCC_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-INSENSITIVE,
CATABOLIC (OTCASE) >gi|279496|pir||OWPSY ornithine
carbamoyltransferase (EC 2.1.3.3) - Pseudomonas syringae
pv. phaseolicola >gi|151043 (M94049) ornithine
carbamoyltransferase [Pseudomonas syringae]
>gi|2077926|dbj|BAA19878| (D86356) phaseolotoxin
resistant ornithine carbamoyltransferase [Pseudomonas
syringae]
Length = 327
Score = 273 bits (691), Expect = 1e-72
Identities = 146/324 (45%), Positives = 198/324 (61%), Gaps = 6/324 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R+ L +F++ EL +LID AI K+LKK+ I + L NI IF K S
Sbjct: 7 KNRNLLTMNEFNQSELSHLIDRAIECKRLKKDRIFNLGLNHLNICGIFLKPSGRTSTSFV 66
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GAH +F ++I+ G KESI D A+V+G +FDGI FRGF+ E LAK SG P
Sbjct: 67 VASYDEGAHFQFFPADNIRFGHKESIKDFARVVGRLFDGIAFRGFEHEVAEELAKHSGIP 126
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
VWN LTD HPTQ+LAD MT+KE FG ++ +T+AYVGDGRNN+ SL + G N+ I
Sbjct: 127 VWNALTDTHHPTQVLADVMTVKEEFGRIEGVTIAYVGDGRNNMVTSLAIGALKFGYNLRI 186
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQTAKR 241
I+P +L P + + + I I T++ G+ AD++YTDVW+SMGE +R
Sbjct: 187 IAPNALHPTDAVLAGIYEQTPERNGSIEIFTEVAAGVHQADVIYTDVWISMGESVSVEER 246
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I LLK Y++ +K++ + IFMHCLP+FHDL+TEV +E + +EV D VF
Sbjct: 247 IALLKPYKVTEKMMALTGKADTIFMHCLPAFHDLDTEVARETPD-----LVEVEDSVFEG 301
Query: 302 KNSVVFEQAENRMHTIKEVMAATL 325
S VF+Q ENRMHTIK +M T+
Sbjct: 302 PQSRVFDQGENRMHTIKALMLETV 325
prf||1707278A Orn carbamoyltransferase [Pseudomonas syringae pv. phaseolicola]
Length = 327
Score = 272 bits (688), Expect = 3e-72
Identities = 147/324 (45%), Positives = 197/324 (60%), Gaps = 6/324 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R+ L F++ EL +LID AI K+LKK+ I + L NI IF K S
Sbjct: 7 KNRNLLTMNFFNQSELSHLIDRAIECKRLKKDRIFNLGLNHLNICGIFLKPSGRTSTSFV 66
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GAH +F ++I+ G KESI D A+V+G +FDGI FRGF+ E LAK SG P
Sbjct: 67 VASYDEGAHFQFFPADNIRFGHKESIKDFARVVGRLFDGIAFRGFEHEVAEELAKHSGIP 126
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
VWN LTD HPTQ+LAD MT+KE FG ++ +T+AYVGDGRNN+ SL + G NI I
Sbjct: 127 VWNALTDTHHPTQVLADVMTVKEEFGRIEGVTIAYVGDGRNNMVTSLAIGALKFGYNIRI 186
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQTAKR 241
I+P +L P + + + I I T++ G+ AD++YTDVW+SMGE +R
Sbjct: 187 IAPNALHPTDAVLAGIYEQTPERNGSIEIFTEVAAGVHQADVIYTDVWISMGESVSVEER 246
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I LLK Y++ +K++ + IFMHCLP+FHDL+TEV +E + +EV D VF
Sbjct: 247 IALLKPYKVTEKMMALTGKADTIFMHCLPAFHDLDTEVARETPD-----LVEVEDSVFEG 301
Query: 302 KNSVVFEQAENRMHTIKEVMAATL 325
S VF+Q ENRMHTIK +M T+
Sbjct: 302 PQSRVFDQGENRMHTIKALMLETV 325
emb|CAA39136.1| (X55520) phaseolotoxin-insensitive ornithine carbamoyltransferase
[Pseudomonas syringae]
Length = 327
Score = 271 bits (686), Expect = 5e-72
Identities = 145/324 (44%), Positives = 198/324 (60%), Gaps = 6/324 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ R+ L +F++ EL +LID AI K+LKK+ I + L NI IF K S
Sbjct: 7 KNRNLLTMNEFNQSELSHLIDRAIECKRLKKDRIFNLGLNHLNICGIFLKPSGRTSTSFV 66
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
D GAH +F ++I+ G KESI D A+V+G +FDGI FRGF+ E LAK SG P
Sbjct: 67 VASYDEGAHFQFFPADNIRFGHKESIKDFARVVGRLFDGIAFRGFEHEVAEELAKHSGIP 126
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
VWN LTD HPTQ+LAD MT+KE FG ++ +T+AYVGDGRNN+ SL + G N+ I
Sbjct: 127 VWNALTDTHHPTQVLADVMTVKEEFGPIEGVTIAYVGDGRNNMVTSLAIGALKFGYNLRI 186
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQTAKR 241
I+P +L P + + + I I T++ G+ AD++YTDVW+SMGE +R
Sbjct: 187 IAPNALHPTDAVLAGIYEQTPERNGSIEIFTEVAAGVHQADVIYTDVWISMGESVSVEER 246
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I LLK Y++ +K++ + IFMHCLP+FHDL+TEV +E + ++V D VF
Sbjct: 247 IALLKPYKVTEKMMALTGKADTIFMHCLPAFHDLDTEVARETPD-----LVQVEDSVFEG 301
Query: 302 KNSVVFEQAENRMHTIKEVMAATL 325
S VF+Q ENRMHTIK +M T+
Sbjct: 302 PQSRVFDQGENRMHTIKALMLETV 325
sp|P96108|OTCA_THEMA ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|1806543|emb|CAA71670| (Y10661) ornithine
carbamoyltransferase [Thermotoga maritima]
>gi|4981642|gb|AAD36173.1|AE001769_3 (AE001769)
ornithine carbamoyltransferase, anabolic [Thermotoga
maritima]
Length = 313
Score = 268 bits (679), Expect = 4e-71
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 18/324 (5%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GRS L +DFS +E+ YL+D + +K + ++ + +A+IFEK S
Sbjct: 6 KGRSLLTLLDFSPEEIRYLLDISKQVKMENRSKLRTERFKGMTLAMIFEKRSTRTRLAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ G HP FL PNDI LG KES+ DTA+VLG M D I FRG+KQ VE LA+ SG P
Sbjct: 66 TAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V+NGLTD +HPTQ LAD MTI+E+FG L+ + + ++GD RNNVA SL++ A +G+N
Sbjct: 126 VYNGLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVA 185
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQTAKR 241
PE L+P ++ K ++ ++ +S ++L L AD+VYTDVW SMGEE + +R
Sbjct: 186 CGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKER 245
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+ LLK YQ+N++V+E IFMHCLP+ + EVT EV
Sbjct: 246 MALLKPYQVNERVMEMTGKSETIFMHCLPA-----------------VKGQEVTYEVIEG 288
Query: 302 KNSVVFEQAENRMHTIKEVMAATL 325
K S V+++AENR HTIK VM ATL
Sbjct: 289 KQSRVWDEAENRKHTIKAVMIATL 312
sp|P75473|OTCC_MYCPN ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|2146484|pir||S73856 ornithine carbamoyl transferase
argI - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1674226 (AE000052) Mycoplasma pneumoniae, ornithine
carbamoyl transferase; similar to Swiss-Prot Accession
Number P04391, from E. coli [Mycoplasma pneumoniae]
Length = 273
Score = 237 bits (599), Expect = 9e-62
Identities = 126/269 (46%), Positives = 176/269 (64%), Gaps = 17/269 (6%)
Query: 74 FLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHP 133
++GP+ GKKESI DTAKVLGSM+DGIEFRGFKQSDV+ L K SG PVWNGLTD HP
Sbjct: 5 YIGPSGSNFGKKESIEDTAKVLGSMYDGIEFRGFKQSDVDALVKYSGVPVWNGLTDAEHP 64
Query: 134 TQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPAL- 192
TQMLAD+MTIKE G L+ + + GD +NNVA SL++ A +G++I ++ P++ +
Sbjct: 65 TQMLADYMTIKELKGDLKGRKIVFAGDIKNNVARSLMIGAAFVGMDIVLVGPKAQHELVQ 124
Query: 193 ------EIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEE-AQTAKRIKL 244
E+ + + + +S TD L +NAD++YTDVW+S+GE+ + +RI+
Sbjct: 125 NGAGYKEVFEQCQALFQLNGGSVSFSTDKLQAAKNADVIYTDVWLSLGEDFSLFEERIQE 184
Query: 245 LKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKEN-------YNLNELEVTDE 297
L +Q++ ++ K + IF+HCLP+FHD +T EIK+ +EVTD
Sbjct: 185 LGQFQVDMAMI-KAAKSDVIFLHCLPAFHDDHTSFSLEIKQKLGKKYPVVKTGAMEVTDT 243
Query: 298 VFNSKNSVVFEQAENRMHTIKEVMAATLG 326
VF SK+++ F QAENR+HTIK V+ ATLG
Sbjct: 244 VFQSKHNMAFIQAENRLHTIKAVILATLG 272
sp|Q01322|OTCC_NEICI ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|281718|pir||S24718 ornithine carbamoyltransferase
(EC 2.1.3.3) - Neisseria cinerea (fragment)
>gi|44820|emb|CAA46081| (X64869) ornithine
carbamoyltransferase [Neisseria cinerea]
Length = 262
Score = 225 bits (567), Expect = 5e-58
Identities = 124/262 (47%), Positives = 170/262 (64%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFAQET 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AY+GD R N+ANSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYIGDARYNMANSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVW 229
V GA LG+++ I +P++L P+ I AR A ++ KI + + ++ AD ++TDVW
Sbjct: 121 VLGAKLGMDVRIGAPKTLWPSENIVARARAVAEETGGKILLTENTKEAVKGADFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAVSGNSKVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESPASIVFDQA 262
sp|P31326|OTC_RANCA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|477221|pir||A48421 ornithine
transcarbamylase - bullfrog >gi|213684 (M95193)
ornithine carbamoyltransferase [Rana catesbeiana]
>gi|2522250|dbj|BAA22775| (D38304) ornithine
transcarbamylase [Rana catesbeiana]
Length = 350
Score = 224 bits (566), Expect = 6e-58
Identities = 126/327 (38%), Positives = 194/327 (58%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L ++S +E+ YL+ A LK KE ++ LL K++A+IFEK S
Sbjct: 34 KGRDLLTLKNYSAEEIKYLLWVAADLKYRIKEKGEYLPLLQGKSLAMIFEKRSTRTRLST 93
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES+ DTA+VL M D + R + QSD+E+LA+++
Sbjct: 94 ETGFALLGGHPSFLTTQDIHLGVNESLKDTARVLSGMTDAVLARVYHQSDLEVLAEEASI 153
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D +HP Q+LAD++TI+EH+GHL+ LT++++GDG NNV +S++++ A G+++
Sbjct: 154 PIVNGLSDDYHPIQILADYLTIQEHYGHLKGLTISWIGDG-NNVLHSIMMSAAKFGMHLH 212
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
I +P+ +P + + A++++ + +K+ + D L A+++ TD WVSMG+E + K
Sbjct: 213 IATPKGYEPNSSLTEAAKQFSKECGTKLLMTNDPLEAANGANVLVTDTWVSMGQEEEKKK 272
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R+ K YQI K K+ N+IF+HCLP + EV DEVF
Sbjct: 273 RLLDFKGYQITMKTA-KLAAPNWIFLHCLPRKPE------------------EVDDEVFY 313
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S+VF++AENR TI VM + L D
Sbjct: 314 CPKSLVFQEAENRKWTIMGVMVSLLTD 340
gi|4218929 (AF065629) ornithine transcarbamylase precursor [Gallus gallus]
>gi|4927368|gb|AAD33083.1| (AF065638) ornithine
transcarbamylase [Gallus gallus]
Length = 354
Score = 224 bits (565), Expect = 8e-58
Identities = 123/327 (37%), Positives = 197/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +++ DEL YL+ A LK+ K+ ++ L+ K++A+IFEK S
Sbjct: 38 KGRDLLTLQNYTADELKYLLWVASDLKQRIKDKGEYLPLMQGKSLAMIFEKRSTRTRLSA 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG H FL DI LG ES++DTA+VL SM + I R +K +D++++ K++
Sbjct: 98 ETGFALLGGHSSFLTKQDIHLGTNESLTDTARVLSSMTNAILARVYKHNDLDLMTKEATI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
PV NGL+D++HP Q+LAD++T++EH+G L LT+A++GDG NNV +S++ + A LG+++
Sbjct: 158 PVINGLSDLYHPLQILADYLTLQEHYGGLNGLTIAWIGDG-NNVLHSIMTSAAKLGMHLR 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
I +P+ +P L I K+ +Y+ + +++ + TD L A+++ TD W+SMG+E + +
Sbjct: 217 IATPKGFEPDLRITKVTEQYSKEYGTRLLLTTDPLEAANGANVLVTDTWISMGQEEEKRR 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R+K + YQI + V+ + N+ F+HCLP + EV DEVF
Sbjct: 277 RLKAFQGYQITMQTVQSAAS-NWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF++AENR TI VM + L D
Sbjct: 318 SPRSLVFQEAENRKWTIMAVMVSLLTD 344
emb|CAA26007| (X01976) OTCase precursor [Rattus norvegicus]
Length = 354
Score = 224 bits (564), Expect = 1e-57
Identities = 122/327 (37%), Positives = 196/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ILAK++
Sbjct: 98 ETGFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDILAKEATI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+G L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 158 PIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P I KLA +YA ++ +++S+ D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDPNIVKLAEQYAKENSTRLSMTNDPLEAARGGNVLITDTWISMGQEDEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
sp|P00481|OTC_RAT ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|66490|pir||OWRT ornithine
carbamoyltransferase (EC 2.1.3.3) precursor - rat
>gi|205872 (M11266) preornithine transcarbamylase
[Rattus norvegicus] >gi|205874 (K03040) preornithine
carbamoyltransferase EC 2.1.3.3 [Rattus norvegicus]
>gi|205886 (M16933) ornithine carbamoyltransferase
[Rattus norvegicus]
Length = 354
Score = 223 bits (563), Expect = 1e-57
Identities = 122/327 (37%), Positives = 196/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ILAK++
Sbjct: 98 ETGFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDILAKEATI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+G L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 158 PIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P I KLA +YA ++ +++S+ D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDPNIVKLAEQYAKENGTRLSMTNDPLEAARGGNVLITDTWISMGQEDEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
ref|NP_032795.1|| ornithine transcarbamylase >gi|129277|sp|P11725|OTC_MOUSE ORNITHINE
CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|2144398|pir||OWMS ornithine
carbamoyltransferase (EC 2.1.3.3) precursor - mouse
>gi|200163 (M17030) ornithine transcarbamylase [Mus
musculus]
Length = 354
Score = 223 bits (563), Expect = 1e-57
Identities = 122/327 (37%), Positives = 195/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 98 ETGFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDTLAKEASI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+G L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 158 PIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P I KLA +YA ++ +K+S+ D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDPNIVKLAEQYAKENGTKLSMTNDPLEAARGGNVLITDTWISMGQEDEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
sp|O19072|OTC_PIG ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|2293083|emb|CAA73480| (Y13045)
ornithine transcarbamylase [Sus scrofa]
Length = 328
Score = 222 bits (561), Expect = 2e-57
Identities = 121/327 (37%), Positives = 195/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 12 KGRDLLTLKNFTGEEIKYILWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 71
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES+ DTA+VL SM D + R +KQSD++ILA+++
Sbjct: 72 ETGFALLGGHPCFLTTQDIHLGVNESLKDTARVLSSMTDAVLARVYKQSDLDILAQEASI 131
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+G L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 132 PIINGLSDLYHPIQILADYLTLQEHYGALKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 190
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+ +P+ +P I KLA +YA ++ + +S+ D L +++ TD W+SMG+E + K
Sbjct: 191 VATPKGYEPDPSITKLAEQYAKENGTNVSLTNDPLEAARGGNVLITDTWISMGQEEEKKK 250
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K E + ++ F+HCLP + EV DEVF
Sbjct: 251 RLQAFQGYQVTMKTAE-VAASDWTFLHCLPRKPE------------------EVDDEVFY 291
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 292 SPQSLVFPEAENRKWTIMAVMVSLLTD 318
pir||S24734 ornithine carbamoyltransferase (EC 2.1.3.3) - Neisseria
meningitidis (fragment) >gi|45056|emb|CAA46077| (X64865)
ornithine carbamoyltransferase [Neisseria meningitidis]
Length = 262
Score = 222 bits (560), Expect = 3e-57
Identities = 122/262 (46%), Positives = 170/262 (64%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQET 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +P+SL P+ I A A ++ +KI++ + + ++N D ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESPASIVFDQA 262
emb|CAA46078| (X64866) ornithine carbamoyltransferase [Neisseria meningitidis]
Length = 262
Score = 222 bits (559), Expect = 4e-57
Identities = 122/262 (46%), Positives = 171/262 (64%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFAQET 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLT-LAYVGDGRNNVANSLL 170
VE L K +G PV+NGLT+ +HPTQMLAD +T++EH G + T AYVGD R N+ NSLL
Sbjct: 61 VEELTKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPWNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +P+SL P+ I A A ++ +KI++ + + ++N D ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESPASIVFDQA 262
sp|Q01323|OTCC_NEIFL ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|281719|pir||S24719 ornithine carbamoyltransferase
(EC 2.1.3.3) - Neisseria flavescens (fragment)
>gi|44834|emb|CAA46084| (X64872) ornithine
carbamoyltransferase [Neisseria flavescens]
Length = 262
Score = 222 bits (559), Expect = 4e-57
Identities = 121/262 (46%), Positives = 171/262 (65%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDV 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH L + AYVGD R N+ANSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADGLTMREHSDKPLNQIAFAYVGDARYNMANSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVW 229
V A LG+++ I +P+SL P+ I ++ + A ++ +I + ++ ++ D ++TDVW
Sbjct: 121 VLAAKLGMDVRISAPKSLWPSENIIEMVQAVAKETGGRILLTENVQEAVKGVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEAWQERIDLLKDYRVTPELMAAAENPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S+ S+VF+QA
Sbjct: 241 LNGVEVTEEVFESEASIVFDQA 262
emb|CAA46074| (X64862) ornithine carbamoyltransferase [Neisseria meningitidis]
>gi|45100|emb|CAA46080| (X64868) ornithine
carbamoyltransferase [Neisseria meningitidis]
>gi|45160|emb|CAA46076| (X64864) ornithine
carbamoyltransferase [Neisseria meningitidis]
>gi|45172|emb|CAA46075| (X64863) ornithine
carbamoyltransferase [Neisseria meningitidis]
Length = 262
Score = 221 bits (558), Expect = 6e-57
Identities = 122/262 (46%), Positives = 170/262 (64%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEV 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +P+SL P+ I A A ++ +KI++ + + ++N D ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESPASIVFDQA 262
gi|205892 (K00001) preornithine carbamoyl transferase [Rattus norvegicus]
Length = 354
Score = 221 bits (557), Expect = 7e-57
Identities = 121/325 (37%), Positives = 194/325 (59%), Gaps = 22/325 (6%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXXXX 63
R L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 40 RDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTET 99
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ILAK++ P+
Sbjct: 100 GFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDILAKEATIPI 159
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGL+D++HP Q+LAD++T++EH+G L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 160 VNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQAA 218
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
+P+ +P I KLA +YA ++ +++S+ D L +++ TD W+SMG+E + KR+
Sbjct: 219 TPKGYEPDPNIVKLAEQYAKENSTRLSMTNDPLEAARGGNVLITDTWISMGQEDEKKKRL 278
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
+ + YQ+ K K+ ++ F+HCLP + EV DEVF S
Sbjct: 279 QAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFYSP 319
Query: 303 NSVVFEQAENRMHTIKEVMAATLGD 327
S+VF +AENR TI VM + L D
Sbjct: 320 RSLVFPEAENRKWTIMAVMVSLLTD 344
sp|Q01325|OTCC_NEIME ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|45012|emb|CAA46079| (X64867) ornithine
carbamoyltransferase [Neisseria meningitidis]
>gi|45243|emb|CAA46073| (X64861) ornithine
carbamoyltransferase [Neisseria meningitidis]
Length = 262
Score = 221 bits (557), Expect = 7e-57
Identities = 121/262 (46%), Positives = 170/262 (64%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEV 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +P+SL P+ I A A ++ +KI++ + + ++N D ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+E+F S S+VF+QA
Sbjct: 241 LNGVEVTEEIFESPASIVFDQA 262
emb|CAA30121| (X07092) ornithine transcarbamylase [Mus musculus]
Length = 354
Score = 220 bits (555), Expect = 1e-56
Identities = 121/327 (37%), Positives = 194/327 (59%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 98 ETGFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDTLAKEASI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+G L+ LTL+++ DG NN+ +S++++ A G+++
Sbjct: 158 PIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIRDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P I KLA +YA ++ +K+S+ D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDPNIVKLAEQYAKENGTKLSMTNDPLEAARGGNVLITDTWISMGQEDEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
sp|Q01326|OTCC_NEIMU ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|281756|pir||S24727 ornithine carbamoyltransferase
(EC 2.1.3.3) - Neisseria mucosa (fragment)
>gi|45018|emb|CAA46085| (X64873) ornithine
carbamoyltransferase [Neisseria mucosa]
Length = 262
Score = 219 bits (553), Expect = 2e-56
Identities = 123/262 (46%), Positives = 168/262 (63%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+ KESI DTA+VLG M+DGIE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLEPSASQIRHKESIKDTARVLGRMYDGIEYRGFGQDV 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ANSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMANSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVW 229
V GA LG+++ I +P++L P+ I AR A ++ KI + + ++ D ++TDVW
Sbjct: 121 VLGAKLGMDVRIGAPKTLWPSENIVARARAVAEETGGKILLTENAEEAVKGVDFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEAWQERIDLLKDYRVTPELMAVSGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESSASIVFDQA 262
prf||1403355A Orn transcarbamylase [Homo sapiens]
Length = 354
Score = 219 bits (551), Expect = 4e-56
Identities = 119/327 (36%), Positives = 193/327 (58%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLRNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 98 ETGLALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+ L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 158 PIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P + KLA +YA ++ +K+ + D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGQEEEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
ref|NP_000522.1|| ornithine carbamoyltransferase >gi|400687|sp|P00480|OTC_HUMAN
ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE)
(ORNITHINE TRANSCARBAMYLASE) >gi|279486|pir||OWHU
ornithine carbamoyltransferase (EC 2.1.3.3) precursor -
human >gi|219959|dbj|BAA00161.1| (D00230) ornithine
transcarbamylase [Homo sapiens]
Length = 354
Score = 219 bits (551), Expect = 4e-56
Identities = 119/327 (36%), Positives = 193/327 (58%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 98 ETGLALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+ L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 158 PIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P + KLA +YA ++ +K+ + D L +++ TD W+SMG+E + K
Sbjct: 217 AATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGQEEEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
pdb|1OTH|A Chain A, Crystal Structure Of Human Ornithine Transcarbamoylase
Complexed With N-Phosphonacetyl-L-Ornithine
Length = 321
Score = 218 bits (549), Expect = 6e-56
Identities = 119/327 (36%), Positives = 192/327 (58%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 5 KGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 64
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP FL DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 65 ETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASI 124
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+ L+ LTL+++GDG NN+ +S++++ A G+++
Sbjct: 125 PIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQ 183
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P + KLA +YA ++ +K+ + D L +++ TD W+SMG E + K
Sbjct: 184 AATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKK 243
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 244 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 284
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 285 SPRSLVFPEAENRKWTIMAVMVSLLTD 311
emb|CAA46072| (X64860) ornithine carbamoyltransferase [Neisseria gonorrhoeae]
Length = 262
Score = 216 bits (545), Expect = 2e-55
Identities = 119/262 (45%), Positives = 167/262 (63%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAAATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFAQET 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +P+SL P+ I A A ++ +KI++ + + ++ ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKGVGFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S +VF+QA
Sbjct: 241 LNGVEVTEEVFESPAGIVFDQA 262
sp|O93656|OTC_PYRAB ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|5458741|emb|CAB50228.1|
(AJ248287) ornithine carbamoyltransferase (argF)
[Pyrococcus abyssi]
Length = 317
Score = 216 bits (544), Expect = 2e-55
Identities = 123/325 (37%), Positives = 189/325 (57%), Gaps = 20/325 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GR L D++ +E+ +++ A LK +K H+ L K +A+IF+K S
Sbjct: 6 KGRDLLCLQDYTPEEIWTILETAKMLKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + P
Sbjct: 66 VAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYASVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNVA+SL++ G LG ++ +
Sbjct: 126 VINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVAHSLMIAGTKLGADVVV 184
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKR 241
+PE +P ++ K A + A +S + D + +++AD++YTDVW SMG+EA+ +R
Sbjct: 185 ATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEER 244
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
K+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S
Sbjct: 245 RKIFRPFQVNKDLV-KHAKPDYMFMHCLPAHRG-----------------EEVTDDVIDS 286
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
NSVV+++AENR+H K V+A LG
Sbjct: 287 PNSVVWDEAENRLHAQKAVLALLLG 311
emb|CAA67609| (X99225) ornithine carbamoyltransferase [Pyrococcus furiosus]
Length = 314
Score = 216 bits (544), Expect = 2e-55
Identities = 122/325 (37%), Positives = 188/325 (57%), Gaps = 19/325 (5%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
GR L D++ +E+ +++ A K +K H+ L K +A+IF+K S
Sbjct: 7 GRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEV 66
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + PV
Sbjct: 67 AMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPV 126
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNVA+SL++ G LG ++ +
Sbjct: 127 INGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVAHSLMIAGTKLGADVVVA 185
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIK 243
+PE +P ++ K A + A +S S + + +++AD++YTDVW SMG+EA+ +R K
Sbjct: 186 TPEGYEPDEKVIKWAEQNAAESGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRK 245
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKN 303
+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S N
Sbjct: 246 IFRPFQVNKDLV-KHAKPDYMFMHCLPAHRG-----------------EEVTDDVIDSPN 287
Query: 304 SVVFEQAENRMHTIKEVMAATLGDL 328
SVV++QAENR+H K V+A +G +
Sbjct: 288 SVVWDQAENRLHAQKAVLALVMGGI 312
sp|Q01327|OTCC_NEIPO ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|281757|pir||S24749 ornithine carbamoyltransferase
(EC 2.1.3.3) - Neisseria polysaccharea (fragment)
>gi|45251|emb|CAA46082| (X64870) ornithine
carbamoyltransferase [Neisseria polysaccharea]
Length = 262
Score = 215 bits (543), Expect = 3e-55
Identities = 120/262 (45%), Positives = 167/262 (62%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEI 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH L AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVW 229
+ GA LG+++ I +PESL P+ I A A ++ +KI++ + + ++ ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPESLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKGVGFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T+V + I E +
Sbjct: 181 VSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S S+VF+QA
Sbjct: 241 LNGVEVTEEVFESPASIVFDQA 262
pdb|1A1S| Ornithine Carbamoyltransferase From Pyrococcus Furiosus
Length = 314
Score = 214 bits (540), Expect = 7e-55
Identities = 122/326 (37%), Positives = 188/326 (57%), Gaps = 20/326 (6%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
GR L D++ +E+ +++ A K +K H+ L K +A+IF+K S
Sbjct: 6 GRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEV 65
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + PV
Sbjct: 66 AMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPV 125
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNVA+SL++ G LG ++ +
Sbjct: 126 INGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVAHSLMIAGTKLGADVVVA 184
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
+PE +P ++ K A + A +S + D + +++AD++YTDVW SMG+EA+ +R
Sbjct: 185 TPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERR 244
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
K+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S
Sbjct: 245 KIFRPFQVNKDLV-KHAKPDYMFMHCLPAHRG-----------------EEVTDDVIDSP 286
Query: 303 NSVVFEQAENRMHTIKEVMAATLGDL 328
NSVV++QAENR+H K V+A +G +
Sbjct: 287 NSVVWDQAENRLHAQKAVLALVMGGI 312
gi|4185289 (AF083209) ornithine carbamoyltransferase [Pyrococcus abyssi]
Length = 320
Score = 214 bits (539), Expect = 9e-55
Identities = 123/325 (37%), Positives = 189/325 (57%), Gaps = 20/325 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GR L D++ +E+ +++ A LK +K H+ L K +A+IF+K S
Sbjct: 6 KGRDLLCLQDYTPEEIWTILETAKMLKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVRFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + P
Sbjct: 66 VAMAHLGGHGLYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYASVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNVA+SL++ G LG ++ +
Sbjct: 126 VINGLSDFSHPCQALADYMTIWEKKGTIKGVKVIYVGDG-NNVAHSLMIAGTKLGADVVV 184
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKR 241
+PE +P ++ K A + A +S + D + +++AD++YTDVW SMG+EA+ +R
Sbjct: 185 ATPEGYEPDEKVIKWADENAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEER 244
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
K+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S
Sbjct: 245 RKIFRPFQVNKDLV-KHAKPSYMFMHCLPAHRG-----------------EEVTDDVIDS 286
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
NSVV+++AENR+H K V+A LG
Sbjct: 287 PNSVVWDEAENRLHAQKAVLALLLG 311
sp|O58457|OTC_PYRHO ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|3257134|dbj|BAA29817|
(AP000003) 317aa long hypothetical ornithine
carbamoyltransferase [Pyrococcus horikoshii]
Length = 317
Score = 213 bits (538), Expect = 1e-54
Identities = 121/325 (37%), Positives = 187/325 (57%), Gaps = 20/325 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GR L D++ +E+ +++ A K +K H+ L K +A+IF+K S
Sbjct: 6 KGRDLLCLQDYTPEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + P
Sbjct: 66 VAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYAHKDVEDLAKYASVP 125
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNV +SL++ G LG ++ +
Sbjct: 126 VINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVCHSLMIAGTKLGADVVV 184
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKR 241
+PE +P ++ K A + A +S + D + +++AD++YTDVW SMG+EA+ +R
Sbjct: 185 ATPEGYEPDKKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEER 244
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
K+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S
Sbjct: 245 RKIFRPFQVNKDLV-KHAKSDYMFMHCLPAHRG-----------------EEVTDDVIDS 286
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
NSVV+++AENR+H K V+A LG
Sbjct: 287 PNSVVWDEAENRLHAQKAVLALLLG 311
sp|Q51742|OTC_PYRFU ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|3341473|emb|CAA73260|
(Y12727) ornithine carbamoyltransferase [Pyrococcus
furiosus]
Length = 315
Score = 213 bits (536), Expect = 2e-54
Identities = 121/326 (37%), Positives = 187/326 (57%), Gaps = 20/326 (6%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
GR L D++ +E+ +++ A K +K H+ L K +A+IF+K S
Sbjct: 7 GRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEV 66
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +L D+QL + E+I+DTA+VL D I R + DVE LAK + PV
Sbjct: 67 AMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPV 126
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGL+D HP Q LAD+MTI E G ++ + + YVGDG NNVA+SL++ G LG ++ +
Sbjct: 127 INGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVAHSLMIAGTKLGADVVVA 185
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
+PE +P ++ K A + A + + D + +++AD++YTDVW SMG+EA+ +R
Sbjct: 186 TPEGYEPDEKVIKWAEQNAAERSGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERR 245
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
K+ + +Q+N+ +V K +++FMHCLP+ EVTD+V +S
Sbjct: 246 KIFRPFQVNKDLV-KHAKPDYMFMHCLPAHRG-----------------EEVTDDVIDSP 287
Query: 303 NSVVFEQAENRMHTIKEVMAATLGDL 328
NSVV++QAENR+H K V+A +G +
Sbjct: 288 NSVVWDQAENRLHAQKAVLALVMGGI 313
gi|189407 (K02100) ornithine transcarbamylase [Homo sapiens]
Length = 354
Score = 212 bits (534), Expect = 4e-54
Identities = 118/327 (36%), Positives = 189/327 (57%), Gaps = 22/327 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
+GR L +F+ +E+ Y++ + LK K+ ++ LL K++ +IFEK S
Sbjct: 38 KGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLST 97
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG HP F DI LG ES++DTA+VL SM D + R +KQSD++ LAK++
Sbjct: 98 ETGFALLGGHPCFPTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASI 157
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
P+ NGL+D++HP Q+LAD++T++EH+ L+ LTL+ GDG NN+ +S++++ A G+++
Sbjct: 158 PIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSCFGDG-NNILHSIMMSAAKFGMHLQ 216
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
+P+ +P + KLA +YA ++ +K+ + D L +++ TD W+SMG E + K
Sbjct: 217 AATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKK 276
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R++ + YQ+ K K+ ++ F+HCLP + EV DEVF
Sbjct: 277 RLQAFQGYQVTMKTA-KVAASDWTFLHCLPRKPE------------------EVDDEVFY 317
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
S S+VF +AENR TI VM + L D
Sbjct: 318 SPRSLVFPEAENRKWTIMAVMVSLLTD 344
sp|O29013|OTC_ARCFU ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|2649323 (AE001017)
ornithine carbamoyltransferase (argF) [Archaeoglobus
fulgidus]
Length = 307
Score = 211 bits (532), Expect = 6e-54
Identities = 118/322 (36%), Positives = 182/322 (55%), Gaps = 22/322 (6%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ L D KDEL ++ A LK+ + + + YL +K++A+IFE S
Sbjct: 2 KHLLSMADLEKDELFEILKLAEKLKEERYKGVVTDYLKNKSLAMIFELPSTRTRVSFEVA 61
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
DLG H +LG +++QLG+ E I DTA+VL + R + S +E A+ S PV
Sbjct: 62 MTDLGGHALYLGWDELQLGRGEPIKDTARVLSRYVHAVMMRVREHSTIEEFARYSTVPVI 121
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIIS 184
NGL+++ HP Q++AD +TI E+ G +D+TLA+VGDG NNV NS+++ A+ G+ + I +
Sbjct: 122 NGLSNLEHPCQVIADLLTIYEYRGDFKDVTLAWVGDG-NNVCNSMILAAALTGMKMVIST 180
Query: 185 PESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKL 244
PE+ P EI K A + K R +R ++ AD++YTDVW SMG+EA+ R+K
Sbjct: 181 PENYDPNPEIVKKAEEMGAKLR---FVRDPKEAVKEADVIYTDVWTSMGQEAEKEARLKA 237
Query: 245 LKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNS 304
+ YQ++ +++ K + + MHCLP+ E+TDEV K+S
Sbjct: 238 FQPYQVSDELL-KFSKDDVVVMHCLPAHRG-----------------EEITDEVMEGKHS 279
Query: 305 VVFEQAENRMHTIKEVMAATLG 326
+VF+QAENR+H K ++ LG
Sbjct: 280 IVFDQAENRLHAQKAILLKLLG 301
sp|Q01324|OTCC_NEILA ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (OTCASE)
>gi|281743|pir||S24723 ornithine carbamoyltransferase
(EC 2.1.3.3) - Neisseria lactamica (fragment)
>gi|44995|emb|CAA46083| (X64871) ornithine
carbamoyltransferase [Neisseria lactamica]
Length = 262
Score = 211 bits (532), Expect = 6e-54
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 3/262 (1%)
Query: 52 KTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSD 111
KTS D GA +L + Q+G KESI DTA+VLG M+D IE+RGF Q
Sbjct: 1 KTSTRTRCAFEVAARDQGAGVTYLESSASQIGHKESIKDTARVLGRMYDAIEYRGFGQET 60
Query: 112 VEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLL 170
VE LAK +G PV+NGLT+ +HPTQMLAD +T++EH G L + AYVGD R N+ NSLL
Sbjct: 61 VEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHGGKPLNQTSFAYVGDARYNMGNSLL 120
Query: 171 VTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVW 229
+ GA LG+++ I +PE L P+ I A A ++ +KI++ + ++ ++TDVW
Sbjct: 121 ILGAKLGMDVRIGAPEGLWPSEGIIAAANAVAEETGAKITLTANPQEAVKGVGFIHTDVW 180
Query: 230 VSMGEEAQT-AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYN 288
VSMGE + +RI LLK Y++ +++ N FMHCLP+FH+ T++ + I E +
Sbjct: 181 VSMGEPKEIWQERIDLLKDYRVTSELMAASGNPQVKFMHCLPAFHNRETKIGEWIYETFG 240
Query: 289 LNELEVTDEVFNSKNSVVFEQA 310
LN +EVT+EVF S +VF+QA
Sbjct: 241 LNGVEVTEEVFESPAGIVFDQA 262
sp|P18186|OTCA_BACSU ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|66493|pir||OWBS ornithine carbamoyltransferase (EC
2.1.3.3) - Bacillus subtilis >gi|39811|emb|CAA37444|
(X53360) argF protein (AA 1 - 319) [Bacillus subtilis]
>gi|408120|emb|CAA81542| (Z26919) ornithine
carbamoyltransferase [Bacillus subtilis]
>gi|2633462|emb|CAB12966| (Z99109) ornithine
carbamoyltransferase [Bacillus subtilis]
>gi|2633479|emb|CAB12982| (Z99110) ornithine
carbamoyltransferase [Bacillus subtilis]
Length = 319
Score = 210 bits (530), Expect = 1e-53
Identities = 123/323 (38%), Positives = 188/323 (58%), Gaps = 24/323 (7%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L D S++++ L+ A LK+ K + I H K +A+IFEK+S
Sbjct: 11 GKDLLTLKDLSEEDINALLAEAGELKQNKIQPIFH----GKTLAMIFEKSSTRTRVSFEA 66
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG FL D+QLG+ E+++DTAKVL D I R F+ VE LAK++ PV
Sbjct: 67 GMAQLGGSALFLSQKDLQLGRGETVADTAKVLSGYVDAIMIRTFEHEKVEELAKEADIPV 126
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD +HP Q LAD +TIKE G L+ + +AY+GDG NNVA+SL++ A +G +I+I
Sbjct: 127 INGLTDKYHPCQALADLLTIKEIKGKLKGVKVAYIGDG-NNVAHSLMIGCAKMGCDISIA 185
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
SP+ + E + A+ YA++S S +++ D + +++AD++Y+DV+ SMG+EA+ +R+
Sbjct: 186 SPKGYEVLDEAAEAAKTYALQSGSSVTLTDDPIEAVKDADVIYSDVFTSMGQEAEEQERL 245
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
+ YQ+N +V ++ F+HCLP+ E EVT E+ +
Sbjct: 246 AVFAPYQVNAALVSH-AKPDYTFLHCLPAH-----------------REEEVTAEIIDGP 287
Query: 303 NSVVFEQAENRMHTIKEVMAATL 325
NS VF+QAENR+H K ++ A L
Sbjct: 288 NSAVFQQAENRLHVQKALLKAIL 310
sp|Q58291|OTC_METJA ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|2129172|pir||A64410
ornithine carbamoyltransferase (EC 2.1.3.3) -
Methanococcus jannaschii >gi|1592314 (U67532) ornithine
carbamoyltransferase (argF) [Methanococcus jannaschii]
Length = 305
Score = 207 bits (522), Expect = 9e-53
Identities = 115/309 (37%), Positives = 185/309 (59%), Gaps = 23/309 (7%)
Query: 14 SKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPE 73
S++++L +I++ I+ KK +++H K L K++A++FEK S +LG HP
Sbjct: 10 SREDVLKIIEYGIYFKKNRRKH--EKILEGKSVAILFEKPSTRTRMSFDIAVYELGGHPL 67
Query: 74 FLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHP 133
+ N+I LGKKESI DTAKV+G D I R +K +E +AK S PV N L+D+ HP
Sbjct: 68 IMNQNEIHLGKKESIKDTAKVMGRYVDTIVARVYKHRHLEEMAKYSSVPVINALSDLAHP 127
Query: 134 TQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPALE 193
Q+LAD MTIKE+ G + L +AY+GDG NNV NSL++ A++G++ + +P+ +P +
Sbjct: 128 CQILADLMTIKEYKGKFKGLKIAYLGDG-NNVCNSLILGSALVGMDTYVGTPKGYEPNAK 186
Query: 194 IQKLARKYAMK-SRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQIN 251
+ A++ +++ D + E+AD++YTDVW+SMG++ + +K+ +QIN
Sbjct: 187 VVLKAKEIINNYGEGSLTLTNDPIEAAEDADVLYTDVWISMGDDKDKEEVLKIFPPFQIN 246
Query: 252 QKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAE 311
K++E + I MHCLP+ Y E+TD+V + ++SVV+++AE
Sbjct: 247 SKLLE-YAKDDVIVMHCLPA------------NRGY-----EITDDVIDGEHSVVYDEAE 288
Query: 312 NRMHTIKEV 320
NR+H K V
Sbjct: 289 NRLHVQKGV 297
emb|CAA11624| (AJ223893) argF [Neisseria sicca]
Length = 232
Score = 205 bits (517), Expect = 4e-52
Identities = 113/232 (48%), Positives = 155/232 (66%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQEVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L AYVGD R N+ANSLLV GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMANSLLVLGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I AR A ++ KI + + ++ D ++TDVWVSMGE + +RI
Sbjct: 121 KTLWPSENIVARARAVAEETGGKILLTENAEEAVKGVDFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++E N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMEASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
dbj|BAA81002.1| (AP000063) 402aa long hypothetical ornithine carbamoyltransferase
[Aeropyrum pernix]
Length = 402
Score = 204 bits (513), Expect = 1e-51
Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 22/323 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKK--LKKEHIQHKYLLDKNIALIFEKTSXXXXXX 60
+GR L D++ +E+ ++++ + +K+ E + L +++ L+FEK S
Sbjct: 95 RGRHLLWLADYTGEEIRHMVELTLEMKRRYYAGERVI-PVLRGRSVGLLFEKPSTRTRIS 153
Query: 61 XXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSG 120
LG H ++ P++ QLG+ E+++DTA+VL D I R +E +A+ +
Sbjct: 154 LEVAVAQLGGHTVYMTPSETQLGRGETVADTARVLSRYLDAIVARVRSHKTLEEMARHAS 213
Query: 121 RPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNI 180
PV NGL+D+ HP Q +AD TI E G L+ + LA+VGDG +NV +SLL+ G+ LG++I
Sbjct: 214 IPVINGLSDLTHPLQAIADMATILEKKGRLEGVKLAFVGDGADNVLHSLLLAGSKLGLHI 273
Query: 181 TIISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTA 239
T+ +P ++P I +A K A +S + I +D + AD+VYTDVWVSMG+E+
Sbjct: 274 TVATPPQIRPDERILSIALKAAEESGGSVEIVSDPYEAVRGADVVYTDVWVSMGQESMAE 333
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
++++LLK YQ+N K++E IFMHCLP+ EVTDEV
Sbjct: 334 EKVQLLKPYQVNAKLME-ATGGRAIFMHCLPA-----------------KRGQEVTDEVI 375
Query: 300 NSKNSVVFEQAENRMHTIKEVMA 322
+ S V++QAENR+H K V++
Sbjct: 376 DGPWSAVWDQAENRLHAHKAVLS 398
emb|CAA11621| (AJ223890) argF [Neisseria cinerea] >gi|3425929|emb|CAA11622|
(AJ223891) argF [Neisseria cinerea]
Length = 232
Score = 204 bits (513), Expect = 1e-51
Identities = 113/232 (48%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L AYVGD R N+ANSLLV GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMANSLLVLGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I AR A ++ KI + + ++ AD ++TDVWVSMGE + +RI
Sbjct: 121 KTLWPSENIVARARAVAEETGGKILLTENTKEAVKGADFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ ++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPDLMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11617| (AJ223886) argF [Neisseria lactamica]
Length = 232
Score = 203 bits (512), Expect = 1e-51
Identities = 110/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L ++ AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLNQISFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I A A ++ +KI++ + ++N D ++TDVWVSMGE + +RI
Sbjct: 121 QSLWPSEGIIAAAHAAAKETGAKITLTENAQEAVKNVDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK+Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKNYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11625| (AJ223894) argF [Neisseria flava]
Length = 232
Score = 203 bits (511), Expect = 2e-51
Identities = 112/232 (48%), Positives = 154/232 (66%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQM AD +T++EH G L AYVGD R N+ANSLLV GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMFADALTMREHSGKPLNQTAFAYVGDARYNMANSLLVLGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I AR A ++ KI + + ++ AD ++TDVWVSMGE + +RI
Sbjct: 121 KTLWPSENIVARARAVAEETGGKILLTENAEEAVKGADFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11635| (AJ223904) argF [Neisseria animalis]
Length = 232
Score = 203 bits (510), Expect = 2e-51
Identities = 108/232 (46%), Positives = 158/232 (67%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P Q+G KESI DTA+VLG M+DGIE+RGF Q VE LA+ +G PV+NG
Sbjct: 1 DQGAGVTYLEPTGSQIGHKESIKDTARVLGRMYDGIEYRGFGQEIVEELAQYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L ++ AYVGD R N+ NSLL+ GA +G+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSSKPLNEIAFAYVGDARFNMGNSLLLLGAKMGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I AR A ++ +K+++ + ++ D ++TDVWVSMGE +T +RI
Sbjct: 121 KALWPSENIIAQARALAEETGAKVTLTENAEEAVQGVDFIHTDVWVSMGEPKETWEERIA 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLKS+++ +++ N N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKSFRVTPELMAASGNPNVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11636| (AJ223905) argF [Neisseria pharyngis]
Length = 232
Score = 202 bits (509), Expect = 3e-51
Identities = 111/232 (47%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+DGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L AYVGD R N+ANSLLV GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLSQTAFAYVGDARYNMANSLLVLGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I AR A ++ +I + + ++ D ++TDVWVSMGE + +RI
Sbjct: 121 KTLWPSEHIVARARAVAKETGGRILLTENAEEAVKGVDFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11619| (AJ223888) argF [Neisseria meningitidis] >gi|3421246|emb|CAA11620|
(AJ223889) argF [Neisseria meningitidis]
>gi|3425931|emb|CAA11623| (AJ223892) argF [Neisseria
cinerea]
Length = 232
Score = 202 bits (508), Expect = 4e-51
Identities = 110/232 (47%), Positives = 155/232 (66%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I A A ++ +KI++ + + ++N D ++TDVWVSMGE + +RI
Sbjct: 121 QSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11618| (AJ223887) argF [Neisseria lactamica]
Length = 232
Score = 201 bits (506), Expect = 7e-51
Identities = 109/232 (46%), Positives = 156/232 (66%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KE I DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKERIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L ++ AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSGKPLNQISFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I A A ++ +KI++ + ++N D ++TDVWVSMGE + +RI
Sbjct: 121 QSLWPSEGIIAAAHAAAEETGAKITLTENAQEAVKNVDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK+Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKNYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA71828| (Y10878) argF [Neisseria polysaccharea]
Length = 232
Score = 201 bits (506), Expect = 7e-51
Identities = 110/232 (47%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEIVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-AKRIK 243
ESL P+ I A A ++ +KI++ + + ++N D ++TDVWVSMGE + +RI
Sbjct: 121 ESLWPSEGIITAAHAVAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11628| (AJ223897) argF [Neisseria perflava]
Length = 232
Score = 200 bits (504), Expect = 1e-50
Identities = 109/232 (46%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L + AYVGD R N+ANSLLV A LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSNKPLNQIAFAYVGDARYNMANSLLVLAAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I + + A ++ +I + ++ ++ D ++TDVWVSMGE + +RI
Sbjct: 121 KSLWPSENIIETVQAVAKETGGRILLTENVKEAVKGVDFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAAAENPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
sp|O27495|OTC_METTH ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|2622559 (AE000906)
ornithine carbamoyltransferase [Methanobacterium
thermoautotrophicum]
Length = 301
Score = 200 bits (504), Expect = 1e-50
Identities = 122/314 (38%), Positives = 178/314 (55%), Gaps = 24/314 (7%)
Query: 16 DELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPEFL 75
D ++ L+D A K+ K I+ K L K +A+IFEK+S +GA P +L
Sbjct: 11 DNVVDLLDLADDYKEGK---IREKILRGKTLAMIFEKSSTRTRVSFEVGAFQMGAQPLYL 67
Query: 76 GPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHPTQ 135
+D+QLG+ E I+DTA+ L DGI R SDV LA ++ PV NGLTD+ HP Q
Sbjct: 68 SASDLQLGRGEPIADTARTLSRYVDGIMIRAISHSDVVELAGEASVPVINGLTDLEHPCQ 127
Query: 136 MLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPALEIQ 195
LAD TI+E G D L +VGDG NNV +SLL+ A LG+++ + P +P I+
Sbjct: 128 ALADMQTIREKLGGF-DGRLVFVGDG-NNVCHSLLLITATLGMDMDVACPPGYEPDPGIR 185
Query: 196 KLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQINQKV 254
++A K A ++ S+I + D + AD+VYTDVWVSMG E + R+++ + YQ+N ++
Sbjct: 186 EMAGKIADETGSRIRVIHDPSEAVRGADVVYTDVWVSMGYEDEAEDRLEVFRPYQVNMEL 245
Query: 255 VEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
+E + IFMHCLP+ + E T EV + +SVV++QAENR+
Sbjct: 246 ME-LAAPEAIFMHCLPA-----------------VRGQETTAEVIDGPHSVVWDQAENRL 287
Query: 315 HTIKEVMAATLGDL 328
H K +M +GD+
Sbjct: 288 HAQKAIMHWLMGDI 301
emb|CAB73250.1| (AL139076) ornithine carbamoyltransferase [Campylobacter jejuni]
Length = 306
Score = 200 bits (503), Expect = 2e-50
Identities = 119/320 (37%), Positives = 184/320 (57%), Gaps = 28/320 (8%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ FL DFSK+E+L L++ A LKK K K L DK +A+IFEK S
Sbjct: 2 KHFLTLRDFSKEEILSLVNHASELKKEPK-----KLLQDKTLAMIFEKNSTRTRMAFELA 56
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
+LG FL ND+QL + E + DTA+V+G+M D + R K + A+ S PV
Sbjct: 57 ITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVI 116
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGHLQD--LTLAYVGDGRNNVANSLLVTGAILGVNITI 182
N L++++HPTQ+L D TIKE + +Q+ +A++GD NN+ NS L+T AILG I+I
Sbjct: 117 NALSELYHPTQVLGDLFTIKE-WNKMQNGIAKVAFIGDS-NNMCNSWLITAAILGFEISI 174
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKR 241
P++ + + EI + A K A+ S +KIS+ D L++ D+V TD WVSMGEE + ++
Sbjct: 175 AMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERK 234
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
IK + + I++K + + NK+ I +HCLP++ EV++E+F
Sbjct: 235 IKEFEGFMIDEKAM-SVANKDAILLHCLPAYRG-----------------YEVSEEIFEK 276
Query: 302 KNSVVFEQAENRMHTIKEVM 321
V+FE+A NR++ +K ++
Sbjct: 277 HADVIFEEARNRLYVVKALL 296
emb|CAA71831| (Y10881) argF [Neisseria polysaccharea]
Length = 232
Score = 200 bits (503), Expect = 2e-50
Identities = 108/232 (46%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q +E LAK +G PV+NG
Sbjct: 1 DQGAGATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEIIEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I A A ++ +KI++ + + ++N D ++TDVWVSMGE + +RI
Sbjct: 121 QSLWPSEGIITAAHAVAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11626| (AJ223895) argF [Neisseria subflava]
Length = 232
Score = 199 bits (502), Expect = 2e-50
Identities = 109/232 (46%), Positives = 154/232 (65%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L + AYVGD R N+ANSLLV A LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSDKPLNQIAFAYVGDARYNMANSLLVLAAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I + + A ++ +I + ++ ++ D ++TDVWVSMGE + +RI
Sbjct: 121 KSLWPSENIIETVQAVAKETGGRILLTENVKEAVKGVDFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKGYRVTPELMVAAENPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11627| (AJ223896) argF [Neisseria mucosa]
Length = 232
Score = 199 bits (500), Expect = 3e-50
Identities = 109/232 (46%), Positives = 153/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDVVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L + AYVGD R N+ANSLLV A LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSDKPLNQVAFAYVGDARYNMANSLLVLAAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIVYTDVWVSMGEEAQT-AKRIK 243
+SL P+ I + + A ++ +I + + ++ D ++TDVWVSMGE + +RI
Sbjct: 121 KSLWPSENIIETVQAVAKETGGRILLTENAQEAVKGVDFIHTDVWVSMGEPKEAWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAAAENPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
gi|3912936 (U43091) ornithine carbamoyltransferase [Bacillus
stearothermophilus]
Length = 311
Score = 198 bits (497), Expect = 8e-50
Identities = 121/324 (37%), Positives = 182/324 (55%), Gaps = 21/324 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GR FL +DFS +E+L L+ A LK +K + + L K +A+IFEK S
Sbjct: 8 KGRDFLTLLDFSTEEILDLLALAADLKAKQKAGVSYTPLSGKTMAMIFEKPSGTRVSFEV 67
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ LG +L N +QLG+ E+I+DTA+VL I R F VE LA+ +
Sbjct: 68 GM-IQLGGQAMYLNGNHLQLGRGETIADTARVLSQYVRVIMIRTFAHQKVEELAEYASFR 126
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
NGLTD HP Q LAD +TI E Q + LAYVGDG NNVAN+LLV A +G+++ I
Sbjct: 127 SSNGLTDDDHPCQALADLLTIYEVKKTFQGVKLAYVGDG-NNVANALLVAAAKVGMDVAI 185
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKR 241
P +P E + A + ++ ++++ D L + AD +YTDVW SMG+E+++++R
Sbjct: 186 ACPPGYEPKKEYVEAACRVGEQTGRRVTVTHDPLVAVAGADRIYTDVWTSMGQESESSER 245
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+++ + YQ+N+++V K +++F+HCLP+ EVT V +
Sbjct: 246 LQVFQPYQVNEELV-KAAKPDYLFLHCLPAHRG-----------------EEVTAGVMDG 287
Query: 302 KNSVVFEQAENRMHTIKEVMAATL 325
NSVVFEQA NR+H K ++ + L
Sbjct: 288 PNSVVFEQAGNRLHAQKAILLSVL 311
sp|P31317|OTC_SCHPO ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|279491|pir||OWZP ornithine
carbamoyltransferase (EC 2.1.3.3) - fission yeast
(Schizosaccharomyces pombe) >gi|4908|emb|CAA45133|
(X63577) ornithine carbamoyltransferase
[Schizosaccharomyces pombe] >gi|1204211|emb|CAA93560.1|
(Z69727) ornithine carbamoyltransferase precursor
[Schizosaccharomyces pombe]
Length = 327
Score = 197 bits (496), Expect = 1e-49
Identities = 121/328 (36%), Positives = 180/328 (53%), Gaps = 27/328 (8%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKY------LLDKNIALIFEKTSXXXX 58
R L D S+ E++ LID + +K+ K++ Q++ L +N+A+IF K S
Sbjct: 8 RHLLSIRDLSRGEIVKLIDRSSEIKQAYKQNFQNRRSVQMSGLSSQNVAMIFSKRSTRTR 67
Query: 59 XXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKD 118
LG + FLG +DIQLG ES+ DT+KV+ SM GI R K SDV LAK
Sbjct: 68 VSVESAVSCLGGNAMFLGKDDIQLGVNESLYDTSKVISSMVSGIVARVNKYSDVATLAKH 127
Query: 119 SGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGV 178
+ PV NGL D +HP Q LAD +TIKE F L +A+VGD NNV + L++ A +G+
Sbjct: 128 ASCPVINGLCDTFHPLQALADLLTIKETFKSFDGLKVAWVGDA-NNVLHDLMIANAKVGI 186
Query: 179 NITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQ 237
+ ++ P+ + +I + + A ++ S I D ++NADIV TD W+SMG+EA+
Sbjct: 187 HTSVAKPKDVNVRDDILSIVNEAANENGSTFEIVNDPKVAVKNADIVVTDTWISMGQEAE 246
Query: 238 TAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDE 297
+R+K +Q+ +++ K+ + FMHCLP + EV+DE
Sbjct: 247 KEQRLKQFTGFQVTGEIM-KLAKPSCKFMHCLPRHPE------------------EVSDE 287
Query: 298 VFNSKNSVVFEQAENRMHTIKEVMAATL 325
VF +NS+VF++AENR T V+ A L
Sbjct: 288 VFYGENSLVFQEAENRKWTTVAVLEALL 315
emb|CAA11633| (AJ223902) argF [Neisseria elongata] >gi|3421200|emb|CAA11634|
(AJ223903) argF [Neisseria elongata]
Length = 232
Score = 196 bits (493), Expect = 2e-49
Identities = 106/232 (45%), Positives = 151/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RG+ Q VE LA+ +G PV+NG
Sbjct: 1 DQGAGVTYLEPSGSQIGHKESIKDTARVLGRMFDGIEYRGYGQEVVEELARYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LTD +HPTQ+LAD +T++EH G LQ YVGD R N+ NSLL+ GA+LG++ I +P
Sbjct: 61 LTDEFHPTQILADLLTMREHSGKPLQQTAYTYVGDARYNMGNSLLLIGALLGMDTRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I A A KS +++ + D + D ++TDVWVSMGE + +RI
Sbjct: 121 KALWPSENIIAQAHSLAEKSGARLLLTEDPQEAVRGTDFIHTDVWVSMGEPKEVWHERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LL+ Y++ ++ N FMHCLP+FH+ T+V + I + + L+ +EVT
Sbjct: 181 LLRGYRVTADLMAAAGNPQVKFMHCLPAFHNRETKVGEWIYKTFGLDGVEVT 232
emb|CAA71829| (Y10879) argF [Neisseria polysaccharea] >gi|1813992|emb|CAA71830|
(Y10880) argF [Neisseria polysaccharea]
Length = 232
Score = 196 bits (493), Expect = 2e-49
Identities = 108/232 (46%), Positives = 152/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEIVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-AKRIK 243
ESL P+ I A A ++ +KI++ + + ++ ++TDVWVSMGE + +RI
Sbjct: 121 ESLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKGVGFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11614| (AJ223883) argF [Neisseria perflava]
Length = 232
Score = 196 bits (492), Expect = 3e-49
Identities = 107/232 (46%), Positives = 151/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG M+D IE+RGF Q +E LAK +G PV+NG
Sbjct: 1 DQGAGATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEIIEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH L AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQT-AKRIK 243
ESL P+ I A A ++ +KI++ + + + ++TDVWVSMGE + +RI
Sbjct: 121 ESLWPSEGIIAAAHAVAKETGAKITLTENAHEAVNGVGFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T+V + I E + LN +EVT
Sbjct: 181 LLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVT 232
emb|CAA11630| (AJ223899) argF [Neisseria elongata]
Length = 232
Score = 194 bits (489), Expect = 7e-49
Identities = 105/232 (45%), Positives = 151/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RG+ Q VE LA+ +G PV+NG
Sbjct: 1 DQGAGVTYLEPSGSQIGHKESIKDTARVLGRMFDGIEYRGYGQEIVEELARYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LTD +HPTQ+LAD +T++EH G LQ YVGD R N+ NSLL+ GA+LG++ I +P
Sbjct: 61 LTDEFHPTQILADLLTMREHCGKPLQQTAYTYVGDARYNMGNSLLLIGALLGMDTRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I A A KS +++ + + + D ++TDVWVSMGE + +RI
Sbjct: 121 KALWPSENIIAQAHSLAEKSGARLLLTDNPKEAVRGTDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LL+ Y++ ++ N FMHCLP+FH+ T+V + I + + L+ +EVT
Sbjct: 181 LLRGYRVTADLMAAAGNPQVKFMHCLPAFHNRETKVGEWIYKTFGLDGVEVT 232
emb|CAA71827| (Y10877) argF [Neisseria lactamica]
Length = 232
Score = 194 bits (489), Expect = 7e-49
Identities = 106/232 (45%), Positives = 152/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L + Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLESSASQIGHKESIKDTARVLGRMYDAIEYRGFGQETVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L + AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHGGKPLNQTSFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
E L P+ I A + A ++ +KI++ + ++ ++TDVWVSMGE + +RI
Sbjct: 121 EGLWPSEGIIAAANRVAEETGAKITLTANPQEAVKGVGFIHTDVWVSMGEPKEIWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T++ + I E + LN +EVT
Sbjct: 181 LLKDYRVTSELMAASGNPQVKFMHCLPAFHNRETKIGEWIYETFGLNGVEVT 232
emb|CAA11616| (AJ223885) argF [Neisseria lactamica]
Length = 232
Score = 194 bits (487), Expect = 1e-48
Identities = 106/232 (45%), Positives = 151/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L + Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLESSASQIGHKESIKDTARVLGRMYDAIEYRGFGQETVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L + AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHGGKPLNQTSFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
E L P+ I A A ++ +KI++ + ++ ++TDVWVSMGE + +RI
Sbjct: 121 EGLWPSEGIIAAANAVAEETGAKITLTANPQEAVKGVGFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T++ + I E + LN +EVT
Sbjct: 181 LLKDYRVTSELMAASGNPKVKFMHCLPAFHNRETKIGEWIYETFGLNGVEVT 232
gb|AAF17705.1|AF033562_1 (AF033562) ornithine carbamoyltransferase; OCTase [Canavalia
lineata]
Length = 359
Score = 193 bits (486), Expect = 2e-48
Identities = 119/324 (36%), Positives = 175/324 (53%), Gaps = 24/324 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQ-HKYLLDKNIALIFEKTSXXXXXXXXX 63
++FL DF KD +L ++D A+ +K L K + + K +++IF K S
Sbjct: 57 KNFLHLDDFDKDTILKMLDRALEVKSLLKSGDRTFRPFEGKTMSMIFTKPSMRTRVSFET 116
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +LGP+DIQ+GK+E D A+VL D I R F D+ LAK + PV
Sbjct: 117 GFTLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLAKYATVPV 176
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD HP Q++AD +T+ EH G + + YVGDG NN+ +S L+ +++ +
Sbjct: 177 INGLTDYNHPCQIMADALTMIEHIGRFEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCA 235
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
P+ +P + + ARK + SKI I D ++ AD+VY+DVW SMG++ + A R
Sbjct: 236 CPKGFEPDAKTVEKARKAGI---SKIEITNDPKEAVKGADVVYSDVWASMGQKEEAAHRR 292
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
++ K +Q++ ++ +K F FMHCLP+ +EVTDEV +
Sbjct: 293 EVFKGFQVDHNLMNIAGSKAF-FMHCLPAERG-----------------VEVTDEVVEAS 334
Query: 303 NSVVFEQAENRMHTIKEVMAATLG 326
NS+VF QAENRMH VM LG
Sbjct: 335 NSIVFPQAENRMHAQNAVMLHVLG 358
emb|CAA11615| (AJ223884) argF [Neisseria lactamica]
Length = 232
Score = 193 bits (486), Expect = 2e-48
Identities = 106/232 (45%), Positives = 151/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L + Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLESSASQIGHKESIKDTARVLGRMYDAIEYRGFGQETVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L + AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHGGKPLNQTSFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
E L P+ I A A ++ +KI++ + ++ ++TDVWVSMGE + +RI
Sbjct: 121 EGLWPSEGIIAAANAVAEETGAKITLTANPQEAVKGVGFIHTDVWVSMGEPKEIWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T++ + I E + LN +EVT
Sbjct: 181 LLKDYRVTSELMAASGNPQVKFMHCLPAFHNRETKIGEWIYETFGLNGVEVT 232
emb|CAA11629| (AJ223898) argF [Neisseria elongata]
Length = 232
Score = 193 bits (485), Expect = 2e-48
Identities = 104/232 (44%), Positives = 150/232 (63%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RG+ Q VE LA+ +G PV+NG
Sbjct: 1 DQGAGVTYLEPSGSQIGHKESIKDTARVLGRMFDGIEYRGYGQEVVEELARYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LTD +HPTQ+LAD +T++EH G LQ Y+GD R N+ NSLL+ GA+LG++ I +P
Sbjct: 61 LTDEFHPTQILADLLTMREHSGKPLQQTAYTYIGDARYNMGNSLLLIGALLGMDTRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I A A KS +++ + + + D ++TDVWVSMGE + +RI
Sbjct: 121 KALWPSENIIAQAHSLAEKSGARLLLTDNPQEAVRGTDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LL+ Y+ ++ N FMHCLP+FH+ T+V + I + + L+ +EVT
Sbjct: 181 LLRGYRFTADLMAAAGNPQVKFMHCLPAFHNRETKVGEWIYKTFGLDGVEVT 232
emb|CAA11631| (AJ223900) argF [Neisseria elongata]
Length = 232
Score = 192 bits (484), Expect = 3e-48
Identities = 105/232 (45%), Positives = 150/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RG+ Q VE LA +G PV+NG
Sbjct: 1 DQGAGVTYLEPSGSQIGHKESIKDTARVLGRMFDGIEYRGYGQEVVEELACYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LTD +HPTQ+LAD +T++EH G LQ YVGD R N+ NSLL+ GA+LG++ I +P
Sbjct: 61 LTDEFHPTQILADLLTMREHSGKTLQQTAYTYVGDARYNMGNSLLLIGALLGMDTRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I A A KS +++ + + + D ++TDVWVSMGE + +RI
Sbjct: 121 KALWPSENIIAQAHSLAEKSGARLLLTDNPQEAVRGTDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LL+ Y++ ++ N FMHCLP+FH+ T+V + I + + L+ +EVT
Sbjct: 181 LLRGYRVTADLMAAAGNPQVKFMHCLPAFHNRETKVGEWIYKTFGLDGVEVT 232
sp|Q43814|OTC_PEA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|971168 (U13684) ornithine
carbamoyltransferase [Pisum sativum]
Length = 375
Score = 192 bits (482), Expect = 5e-48
Identities = 119/324 (36%), Positives = 173/324 (52%), Gaps = 24/324 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQ-HKYLLDKNIALIFEKTSXXXXXXXXX 63
+ F+ DF K+ +L ++D AI +K L K + + K +++IF K S
Sbjct: 73 KDFIHIDDFDKETILKILDRAIEVKTLLKSGDRTFRPFEGKTMSMIFAKPSMRTRVSFET 132
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +LGPNDIQ+GK+E D A+VL D I R F D+ LAK + PV
Sbjct: 133 GFSLLGGHAIYLGPNDIQMGKREETRDVARVLSRYNDIIMARVFSHQDILDLAKYASVPV 192
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD HP Q++AD +T+ EH G + + YVGDG NN+ +S L+ A++ +
Sbjct: 193 INGLTDYNHPVQIMADALTMIEHIGRFEGTKVVYVGDG-NNIVHSWLLLAAVVPFHFVCA 251
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
P+ +P + + ARK + SKI I D + AD+VY+DVW SMG++ + A R
Sbjct: 252 CPKGFEPDAKTVEKARKAGI---SKIEISHDPKEAVRGADVVYSDVWASMGQKEEAAYRR 308
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
+ K +Q++Q +++ +K F FMHCLP+ +EVTDEV +
Sbjct: 309 EAFKGFQVDQNLMDAAGSKAF-FMHCLPAERG-----------------VEVTDEVVEAP 350
Query: 303 NSVVFEQAENRMHTIKEVMAATLG 326
S+VF QAENRMH +M LG
Sbjct: 351 YSIVFPQAENRMHAQNAIMLHVLG 374
emb|CAA11632| (AJ223901) argF [Neisseria elongata]
Length = 232
Score = 191 bits (480), Expect = 8e-48
Identities = 105/232 (45%), Positives = 148/232 (63%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L P+ Q+G KESI DTA+VLG MFDGIE+RG+ Q VE LA G PV+NG
Sbjct: 1 DQGAALTYLEPSGTQIGHKESIKDTARVLGRMFDGIEYRGYGQEVVEELACYPGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LTD +HPTQ+LAD T++EH G LQ YVGD R N+ NSLL+ GA+LG++ I +P
Sbjct: 61 LTDEFHPTQILADLFTMREHSGKTLQQTAYTYVGDARYNMGNSLLLIGALLGMDTRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
++L P+ I A A KS +++ + + + D ++TDVWVSMGE + +RI
Sbjct: 121 KALWPSENIIAQAHSLAEKSGARLLLTDNPQEAVRGTDFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LL+ Y++ ++ N FMHCLP+FH+ T+V + I + + L+ +EVT
Sbjct: 181 LLRGYRVTADLMAAAGNPQVKFMHCLPAFHNRETKVGEWIYKTFGLDGVEVT 232
emb|CAA71826| (Y10876) argF [Neisseria lactamica]
Length = 232
Score = 190 bits (479), Expect = 1e-47
Identities = 105/232 (45%), Positives = 150/232 (64%), Gaps = 3/232 (1%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
D GA +L + Q+G KESI DTA+VLG M+D IE+RGF Q VE LAK +G PV+NG
Sbjct: 1 DQGAGVTYLESSASQIGHKESIKDTARVLGRMYDAIEYRGFGQETVEELAKYAGVPVFNG 60
Query: 127 LTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISP 185
LT+ +HPTQMLAD +T++EH G L + AYVGD R N+ NSLL+ GA LG+++ I +P
Sbjct: 61 LTNEFHPTQMLADALTMREHGGKPLNQTSFAYVGDARYNMGNSLLILGAKLGMDVRIGAP 120
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT-AKRIK 243
E L + I A A ++ +KI++ + ++ ++TDVWVSMGE + +RI
Sbjct: 121 EGLWASEGIIAAANAVAEETGAKITLTANPQEAVKGVGFIHTDVWVSMGEPKEVWQERID 180
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
LLK Y++ +++ N FMHCLP+FH+ T++ + I E + LN +EVT
Sbjct: 181 LLKDYRVTSELMAASGNPKVKFMHCLPAFHNRETKIGEWIYETFGLNGVEVT 232
dbj|BAA22924| (D86376) ArgF [Bacillus subtilis]
Length = 238
Score = 185 bits (465), Expect = 4e-46
Identities = 101/248 (40%), Positives = 155/248 (61%), Gaps = 20/248 (8%)
Query: 79 DIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHPTQMLA 138
D+QLG+ E+++DTAKVL D I R F+ VE LAK++ PV NGLTD +HP Q LA
Sbjct: 1 DLQLGRGETVADTAKVLSGYVDAIMIRTFEHEKVEELAKEADIPVINGLTDKYHPCQALA 60
Query: 139 DFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPALEIQKLA 198
D +TIKE G L+ + +AY+GDG NNVA+SL++ A +G +I+I SP+ + E + A
Sbjct: 61 DLLTIKEIKGKLKGVKVAYIGDG-NNVAHSLMIGCAKMGCDISIASPKGYEVLDEAAEAA 119
Query: 199 RKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK 257
+ YA++S S +++ D + +++AD++Y+DV+ SMG+EA+ +R+ + YQ+N +V
Sbjct: 120 KTYALQSGSSVTLTDDPIEAVKDADVIYSDVFTSMGQEAEEQERLAVFAPYQVNAALVSH 179
Query: 258 IINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENRMHTI 317
++ F+HCLP+ E EVT E+ + NS VF+QAENR+H
Sbjct: 180 -AKPDYTFLHCLPAH-----------------REEEVTAEIIDGPNSAVFQQAENRLHVQ 221
Query: 318 KEVMAATL 325
K ++ A L
Sbjct: 222 KALLKAIL 229
gb|AAF17704.1|AF033561_1 (AF033561) ornithine carbamoyltransferase [Canavalia lineata]
Length = 369
Score = 185 bits (464), Expect = 6e-46
Identities = 112/324 (34%), Positives = 166/324 (50%), Gaps = 24/324 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQ-HKYLLDKNIALIFEKTSXXXXXXXXX 63
+ FL DF K + ++D AI +K L K + + K +A++F K S
Sbjct: 67 KDFLHINDFDKKSIFKILDRAIEVKALIKSGDRAFQPFKGKTMAMVFCKPSLRTHVSFET 126
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H +L P DIQ+G +E D A++L D I R F D+ +L+K PV
Sbjct: 127 GFTLLGGHAVYLAPTDIQMGTREETRDVARILSRFTDIIMARVFSHQDILVLSKYGSVPV 186
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
NGLTD HP Q++AD +TI EH G L+ +AYVGDG NNV +S L +++ +
Sbjct: 187 VNGLTDYNHPCQVMADAITIIEHIGKLEGTKIAYVGDG-NNVVHSWLEMASLVPIQFVCA 245
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
SP+ +P +K K SKI I D ++ ADIVYTDVW SMG++ + +R+
Sbjct: 246 SPKGFEPD---KKTVEKAKQAGLSKIVITNDPKEAVKGADIVYTDVWASMGQKEEADRRL 302
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
K +Q++Q +++ + +FMHCLP+ EVT++V
Sbjct: 303 ASFKGFQVDQSLMD-LAGSKALFMHCLPA-----------------EKGTEVTEDVIEGP 344
Query: 303 NSVVFEQAENRMHTIKEVMAATLG 326
S++F+QAENR+H +M LG
Sbjct: 345 RSIIFDQAENRLHAQNAIMLHVLG 368
sp|Q55497|OTCA_SYNY3 ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|1001360|dbj|BAA10847| (D64006) ornithine
carbamoyltransferase chain f [Synechocystis sp.]
Length = 308
Score = 183 bits (461), Expect = 1e-45
Identities = 114/325 (35%), Positives = 173/325 (53%), Gaps = 28/325 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKK-LKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
GR L D + +E+ L+ A LK + K H + K + L+F K S
Sbjct: 8 GRDLLAIADLTIEEMKSLLQLAADLKSGVLKPHCR------KILGLLFYKASTRTRVSFT 61
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
LG L P+ Q+G+ E I DTA+VL D + R FKQ+D++ A + P
Sbjct: 62 AAMYQLGGQVLDLNPSVTQVGRGEPIQDTARVLDRYIDILAVRTFKQTDLQTFADHAKMP 121
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
+ N L+D+ HP Q+LAD TIKE FG L+ LT+ Y+GDG NNVA+SL++ G ++G+ + +
Sbjct: 122 IINALSDLEHPCQILADLQTIKECFGKLEGLTVTYLGDG-NNVAHSLILGGVMMGMTVRV 180
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKR 241
+P++ +P EI + A++ A K+ + D + + I+YTDVW SMG+E R
Sbjct: 181 ATPKNYEPLAEIVQQAQQIAAPG-GKVELTDDPKAAAQGSHILYTDVWASMGQEDLADSR 239
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
I + + YQINQ+++ + + I +HCLP+ E+TD V
Sbjct: 240 IPIFQPYQINQELL-ALADPEAIVLHCLPAHRG-----------------EEITDAVMEG 281
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
S +++QAENRMH K +M A LG
Sbjct: 282 PQSRLWDQAENRMHAQKALMVALLG 306
dbj|BAA04509.1| (D17585) ornithine transcarbamylase [Mycoplasma sp.]
Length = 226
Score = 182 bits (458), Expect = 3e-45
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 10/213 (4%)
Query: 67 DLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNG 126
DLGA ++GP GKKESI DTA+VLG +DGIEFRGFKQSDV+ L K SG PVWNG
Sbjct: 15 DLGASCTYIGPAGSNFGKKESIEDTAQVLGRFYDGIEFRGFKQSDVDALVKYSGVPVWNG 74
Query: 127 LTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPE 186
LTD HPTQMLAD+MTIKE G L+ + + GD +NNVA S+++ A G+N + P+
Sbjct: 75 LTDAEHPTQMLADYMTIKEFKGDLKGKKIVFAGDIKNNVARSIMIGAAFTGMNCVLCGPK 134
Query: 187 SLQPAL-------EIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQT 238
+ E+ + + ++ I+ D + ++AD +YTDVWVS+GE+
Sbjct: 135 EQAKIVKTGKGYKEVYEKCLELFKRNGGSITFEDDKIKAAKDADAIYTDVWVSLGEDFSL 194
Query: 239 AK-RIKLLKSYQINQKVVEKIINKNFIFMHCLP 270
+ RIK L ++Q++ K++ K ++ IF+HCLP
Sbjct: 195 FEPRIKELGAFQVDMKMI-KAAKEDVIFLHCLP 226
gb|AAF09673.1|AE001871_5 (AE001871) ornithine carbamoyltransferase [Deinococcus radiodurans]
Length = 353
Score = 182 bits (456), Expect = 5e-45
Identities = 110/326 (33%), Positives = 176/326 (53%), Gaps = 26/326 (7%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
GR FL +D + EL ++D A +K + + K L ++AL+FEK S
Sbjct: 49 GRDFLSNLDMTSAELRAVMDTAHSMKAGEWRAV--KPLSGLSLALVFEKASLRTRTTFDV 106
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H L +I LG +E +SD A+ L DG+ R + Q + LA+ + PV
Sbjct: 107 GMYQLGGHAITLSNTEIGLGTRERVSDVARNLERWVDGVMGRVYLQQTLVELAQHARIPV 166
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
NGL+D+ HP Q+LAD+ TI+E FG L+ + Y+GDG NN+ANS + G + G ++T+
Sbjct: 167 INGLSDMLHPAQLLADYQTIEEEFGQDLRGKRVVYIGDG-NNLANSHIHMGILTGTDVTV 225
Query: 183 ISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRI 242
++P +P + A+K+ ++ + DL+ ++ AD++YTDVW+SMG+EA+ R
Sbjct: 226 VTPVGYEPNAGV----LMDAVKAGVEVHLTNDLDAIQGADVLYTDVWISMGQEAEADIRR 281
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
+ + YQ+ +++E I+ + IF+HCLP+ + E E
Sbjct: 282 RAFRGYQVTPEMLE-TISPDGIFLHCLPAHYG-----------------EETVPEATEHP 323
Query: 303 NSVVFEQAENRMHTIKEVMAATLGDL 328
S VF+QAENR+H K ++ LGD+
Sbjct: 324 KSRVFDQAENRLHAQKALLYHVLGDM 349
sp|P96134|OTCA_THETH ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE) (OTC)
>gi|1781357|emb|CAA71315| (Y10266) ornithine
carbamoyltransferase [Thermus thermophilus]
>gi|3859094|emb|CAA77140| (Y18353) ornithine
carbamoyltransferase [Thermus thermophilus]
Length = 301
Score = 180 bits (451), Expect = 2e-44
Identities = 111/318 (34%), Positives = 169/318 (52%), Gaps = 33/318 (10%)
Query: 11 IDFS---KDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVD 67
+DFS EL L+D A ++LK+E + + L K +AL+FEK S V
Sbjct: 13 LDFSGYGPKELQALLDLA---ERLKRERYRGEDLKGKVLALLFEKPSLRTRTTLEVAMVH 69
Query: 68 LGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGL 127
LG H +L + +G++E + D AK L +GI R F+ VE LA+ + PV N L
Sbjct: 70 LGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNAL 129
Query: 128 TDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPES 187
+D HP Q LAD +T+KE FG L L +A+VGDG NNV NSLL + G+ + + +P+
Sbjct: 130 SDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDG-NNVLNSLLEVAPLAGLKVRVATPKG 188
Query: 188 LQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKLLKS 247
+P + K A + + ++ A +YTDVW SMG+EA+ AKR++ +
Sbjct: 189 YEPDPGLLKRANAFFTHDPKEAAL--------GAHALYTDVWTSMGQEAERAKRLRDFQG 240
Query: 248 YQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVF 307
+Q+N +++ K++ +F+HCLP+ + E T+E + S VF
Sbjct: 241 FQVNGELL-KLLRPEGVFLHCLPAHYG-----------------EETTEEAVHGPRSRVF 282
Query: 308 EQAENRMHTIKEVMAATL 325
+QAENR+HT K V+ L
Sbjct: 283 DQAENRLHTAKAVLLTLL 300
gi|3617827 (AF030524) ornithine carbamoyltransferase; OCT [Nostoc PCC73102]
Length = 306
Score = 178 bits (448), Expect = 4e-44
Identities = 111/323 (34%), Positives = 162/323 (49%), Gaps = 24/323 (7%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
GR L D S EL L+ A LK Q K +K + L+F K S
Sbjct: 6 GRDLLSLADISSTELQELLQLATQLKSQ-----QLKLQCNKVLGLLFSKASTRTRVSFTV 60
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG L PN Q+ + E + DTA+VL D + R F Q D+E A + PV
Sbjct: 61 AMYQLGGQVIDLNPNVTQVSRGEPLQDTARVLDRYLDILAIRTFAQQDLETFAHYAKIPV 120
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
N LTD HP Q+LAD +TI+E F L LTL YVGDG NN+ANSL++ A++G+N+ I
Sbjct: 121 INALTDAEHPCQVLADLLTIQESFNTLAGLTLTYVGDG-NNMANSLMLGCALVGMNVRIA 179
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIK 243
+P+ +P +I + AR A + + + ++YTDVW SMG+E + +
Sbjct: 180 TPDGYEPDSQIVEQARAIANNKTEVLLTHDPELAAKGSTVLYTDVWASMGQETEADNSMP 239
Query: 244 LLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKN 303
+ + YQI+++++ + I +HCLP+ E+T+ V
Sbjct: 240 IFQPYQISEQLL-SLAAPEAIVLHCLPAHRG-----------------EEITEAVIEGSQ 281
Query: 304 SVVFEQAENRMHTIKEVMAATLG 326
S V+EQAENR+H K ++A+ LG
Sbjct: 282 SRVWEQAENRLHAQKALLASILG 304
sp|P11724|OTCA_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|279495|pir||OWPSAA ornithine carbamoyltransferase
(EC 2.1.3.3), anabolic - Pseudomonas aeruginosa
>gi|151039 (M19939) ornithine carbamoyltransferase (EC
2.1.3.3) [Pseudomonas aeruginosa]
Length = 305
Score = 178 bits (448), Expect = 4e-44
Identities = 105/317 (33%), Positives = 163/317 (51%), Gaps = 25/317 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R FL +D+S +EL+ LI LK L+ + ++ L + + ++FEK S
Sbjct: 4 RHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAG 63
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
+ LG FL P D QLG+ E I D+A+V+ M DG+ R F + + A S PV
Sbjct: 64 MIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVI 123
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIIS 184
NGL+D HP Q+LAD T EH G +Q T+A++GDG NN+ NS + + +
Sbjct: 124 NGLSDDLHPCQLLADMQTFHEHRGSIQGKTVAWIGDG-NNMCNSYIEEEMKFDFQLRVAC 182
Query: 185 PESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKL 244
PE +P E LA R ++ +R + A +V TDVW SMG+E + A RI +
Sbjct: 183 PEGYEPKAEFVALA-----GDRLRV-VRDPREAVAGAHLVSTDVWASMGQEDEAAARIAM 236
Query: 245 LKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNS 304
+ YQ+N +++ + + +FMHCLP+ E+++E+ + S
Sbjct: 237 FRPYQVNAALLDGAAD-DVLFMHCLPAHRG-----------------EEISEELLDDPRS 278
Query: 305 VVFEQAENRMHTIKEVM 321
V ++QAENR+H K ++
Sbjct: 279 VAWDQAENRLHAQKALL 295
sp|Q02095|OTCA_MYCBO ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|581311|emb|CAA45530| (X64203) ornithine
carbamoyltransferase [Mycobacterium bovis]
Length = 307
Score = 177 bits (444), Expect = 1e-43
Identities = 103/319 (32%), Positives = 169/319 (52%), Gaps = 23/319 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXXXX 63
R FL++ D S E +++ A +LKK+ + + L + +A+IF+K S
Sbjct: 3 RHFLRDDDLSPAEQAEVLELAA---ELKKDPVSRRPLQGPRGVAVIFDKNSTRTRFSFEL 59
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H + QLG+ E++ DTAKVL D I +R F Q ++ +A + PV
Sbjct: 60 GIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPV 119
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
N L+D +HP Q+LAD TI E G L+ L L+Y GDG NN+A+SLL+ G G+++T+
Sbjct: 120 INALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVA 179
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKRI 242
+PE P ++ A + A + + +++ D + AD++ TD W SMG+E R+
Sbjct: 180 APEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAAADVLVTDTWTSMGQENDGLDRV 239
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
K + +Q+N +++ + + + I +HCLP+ E+TD V +
Sbjct: 240 KPFRPFQLNSRLL-ALADSDAIVLHCLPAHRG-----------------DEITDAVMDGP 281
Query: 303 NSVVFEQAENRMHTIKEVM 321
S V+++AENR+H K V+
Sbjct: 282 ASAVWDEAENRLHAQKAVL 300
sp|P94991|OTCA_MYCTU ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|1839008|emb|CAB06650| (Z85982) argF [Mycobacterium
tuberculosis]
Length = 307
Score = 176 bits (443), Expect = 2e-43
Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 23/319 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXXXX 63
R FL++ D S E +++ A +LKK+ + + L + +A+IF+K S
Sbjct: 3 RHFLRDDDLSPAEQAEVLELAA---ELKKDPVSRRPLQGPRGVAVIFDKNSTRTRFSFEL 59
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG H + QLG+ E++ DTAKVL D I +R F Q ++ +A + PV
Sbjct: 60 GIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPV 119
Query: 124 WNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
N L+D +HP Q+LAD TI E G L+ L L+Y GDG NN+A+SLL+ G G+++T+
Sbjct: 120 INALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVA 179
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKRI 242
+PE P ++ A + A + + +++ D + AD++ TD W SMG+E R+
Sbjct: 180 APEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRV 239
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
K + +Q+N +++ + + + I +HCLP+ E+TD V +
Sbjct: 240 KPFRPFQLNSRLL-ALADSDAIVLHCLPAHRG-----------------DEITDAVMDGP 281
Query: 303 NSVVFEQAENRMHTIKEVM 321
S V+++AENR+H K ++
Sbjct: 282 ASAVWDEAENRLHAQKALL 300
sp|Q08016|OTC1_SALTY ORNITHINE CARBAMOYLTRANSFERASE CHAIN I (OTCASE-1)
>gi|421212|pir||S34359 ornithine carbamoyltransferase
(EC 2.1.3.3) chain I - Salmonella typhimurium (fragment)
>gi|312706|emb|CAA51780| (X73368) arnithine
carbamoyltransferase [Salmonella typhimurium]
Length = 218
Score = 176 bits (443), Expect = 2e-43
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F + FLK +DF+ EL L+ A LK KK + + L+ KNIALIFEK S
Sbjct: 4 FYQKPFLKLLDFTASELTALLQLAAKLKADKKNGKEEQKLVGKNIALIFEKDSTRTRCSF 63
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
D GA +LG + Q+G KESI DTA+VLG MFDGI++RG+ Q VE LA+ SG
Sbjct: 64 EVAAYDQGARVTYLGSSGSQIGHKESIKDTARVLGRMFDGIQYRGYGQEIVETLAEYSGV 123
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF--GHLQDLTLAYVGDGRNNVANSLLVTGAILGVN 179
PVWNGLTD +HPTQ+LAD +T++EH ++TL Y GD RNN+ NS+L A+ G++
Sbjct: 124 PVWNGLTDEYHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLD 183
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTD 214
+ +++P++ P + A K+ I++ D
Sbjct: 184 LRLVAPKACWPQAALVAECSAMAKKNGGAITLTED 218
sp|P96172|OTCA_VIBS2 ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE)
>gi|2370582|emb|CAA71921| (Y11033) ornithine
carbamoyltransferase [Vibrio sp.]
Length = 301
Score = 175 bits (438), Expect = 7e-43
Identities = 107/314 (34%), Positives = 164/314 (52%), Gaps = 22/314 (7%)
Query: 12 DFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAH 71
D SK ++L L+ A +K E+ Q L K+I I+EK S LG H
Sbjct: 9 DLSKQQILDLLALAKAVKANPAEYSQA--LAGKSIVTIYEKPSLRTRVTFDIGIHKLGGH 66
Query: 72 PEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVW 131
+L + +G++E++ D A + D I R +E L + PV N L D++
Sbjct: 67 AVYLDAQNGAIGERETVKDFAANISRWADAIVARVVSHKTLEGLVEHGSVPVVNSLCDLY 126
Query: 132 HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPA 191
HP Q LADF+TI EH+ + + LAYVG+G NNV +SL++TGAILG +T + P P
Sbjct: 127 HPCQALADFLTISEHYEDVSKVKLAYVGEG-NNVTHSLMLTGAILGAEVTAVCPRGSSPD 185
Query: 192 LEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQIN 251
+I K A A S KI++ +L+ + + D++Y D WVSMG++ A+ + YQIN
Sbjct: 186 AQIVKQAMALAEISGGKINVTDNLDAIVDYDVIYGDTWVSMGDDTPLAQVKEKYMPYQIN 245
Query: 252 QKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAE 311
+ ++ + K+ +HC P+ ELE+T EV + ++S++F+QAE
Sbjct: 246 KALLMRTGIKH--VLHCQPAH-----------------RELEITSEVMDGEHSLIFDQAE 286
Query: 312 NRMHTIKEVMAATL 325
NRMH V+ L
Sbjct: 287 NRMHAQNAVLLTLL 300
pir||OWBY ornithine carbamoyltransferase (EC 2.1.3.3) - yeast (Saccharomyces
cerevisiae) >gi|929866|emb|CAA58480| (X83502) ARG3
(J0924) [Saccharomyces cerevisiae]
>gi|1008256|emb|CAA89381| (Z49363) ORF YJL088w
[Saccharomyces cerevisiae]
Length = 440
Score = 173 bits (434), Expect = 2e-42
Identities = 112/320 (35%), Positives = 162/320 (50%), Gaps = 36/320 (11%)
Query: 12 DFSKDELLYLIDFAIHLKKLKKEH------IQHKYLLDKNIALIFEKTSXXXXXXXXXXX 65
D S +E L+ A H K + K + H LL + IALIF K S
Sbjct: 121 DLSDEEFRILVQRAQHFKNVFKANKTNDFQSNHLKLLGRTIALIFTKRSTRTRISTEGAA 180
Query: 66 VDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWN 125
GA P FLG DIQLG ES DT KV+ SM I R K D+ KDS P+ N
Sbjct: 181 TFFGAQPMFLGKEDIQLGVNESFYDTTKVVSSMVSCIFARVNKHEDILAFCKDSSVPIIN 240
Query: 126 GLTDVWHPTQMLADFMTIKEHF---------GHLQDLTLAYVGDGRNNVANSLLVTGAIL 176
L D +HP Q + D +TI E+F G L +A++GD NNV N + +
Sbjct: 241 SLCDKFHPLQAICDLLTIIENFNISLDEVNKGINSKLKMAWIGDA-NNVINDMCIACLKF 299
Query: 177 GVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEE 235
G++++I +P ++ +I A+K A ++ + + D L NA+I+ TD +VSMGEE
Sbjct: 300 GISVSISTPPGIEMDSDIVDEAKKVAERNGATFELTHDSLKASTNANILVTDTFVSMGEE 359
Query: 236 AQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
++K K +QINQ++V + + N+ FMHCLP + EV+
Sbjct: 360 FAKQAKLKQFKGFQINQELV-SVADPNYKFMHCLPRHQE------------------EVS 400
Query: 296 DEVFNSKNSVVFEQAENRMH 315
D+VF ++S+VFE+AENR++
Sbjct: 401 DDVFYGEHSIVFEEAENRLY 420
ref|NP_012447.1|ARG3| Ornithine carbamoyltransferase; Arg3p
>gi|129280|sp|P05150|OTC_YEAST ORNITHINE
CARBAMOYLTRANSFERASE (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|171075 (M11946) ornithine
carbamoyltransferase (EC 2.1.3.3) [Saccharomyces
cerevisiae] >gi|171077 (M28301) ornithine
carbamoyltransferase [Saccharomyces cerevisiae]
Length = 338
Score = 173 bits (434), Expect = 2e-42
Identities = 112/320 (35%), Positives = 162/320 (50%), Gaps = 36/320 (11%)
Query: 12 DFSKDELLYLIDFAIHLKKLKKEH------IQHKYLLDKNIALIFEKTSXXXXXXXXXXX 65
D S +E L+ A H K + K + H LL + IALIF K S
Sbjct: 19 DLSDEEFRILVQRAQHFKNVFKANKTNDFQSNHLKLLGRTIALIFTKRSTRTRISTEGAA 78
Query: 66 VDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWN 125
GA P FLG DIQLG ES DT KV+ SM I R K D+ KDS P+ N
Sbjct: 79 TFFGAQPMFLGKEDIQLGVNESFYDTTKVVSSMVSCIFARVNKHEDILAFCKDSSVPIIN 138
Query: 126 GLTDVWHPTQMLADFMTIKEHF---------GHLQDLTLAYVGDGRNNVANSLLVTGAIL 176
L D +HP Q + D +TI E+F G L +A++GD NNV N + +
Sbjct: 139 SLCDKFHPLQAICDLLTIIENFNISLDEVNKGINSKLKMAWIGDA-NNVINDMCIACLKF 197
Query: 177 GVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEE 235
G++++I +P ++ +I A+K A ++ + + D L NA+I+ TD +VSMGEE
Sbjct: 198 GISVSISTPPGIEMDSDIVDEAKKVAERNGATFELTHDSLKASTNANILVTDTFVSMGEE 257
Query: 236 AQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
++K K +QINQ++V + + N+ FMHCLP + EV+
Sbjct: 258 FAKQAKLKQFKGFQINQELV-SVADPNYKFMHCLPRHQE------------------EVS 298
Query: 296 DEVFNSKNSVVFEQAENRMH 315
D+VF ++S+VFE+AENR++
Sbjct: 299 DDVFYGEHSIVFEEAENRLY 318
emb|CAA66276| (X97684) ornithine carbamoyl transferase [Clostridium perfringens]
Length = 217
Score = 173 bits (433), Expect = 3e-42
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 3/203 (1%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+GRSFL DF+ E+ YL+D + LK K+ I L KN+ L+FEKTS
Sbjct: 6 KGRSFLTLKDFTPAEIRYLLDLSHDLKAKKRAGILGDSLKGKNVVLLFEKTSTRTRCAFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ GAH FL + Q+GKKESI DTAKVLG M+DGIEFRGFKQS VE LAK +G P
Sbjct: 66 CGAAEEGAHVTFL--TNSQMGKKESIEDTAKVLGRMYDGIEFRGFKQSTVEELAKHAGVP 123
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITI 182
V NGLTD HPTQ+LADF+TI+ H L ++ L + GD RNN++ +L+ A +G++
Sbjct: 124 VVNGLTDADHPTQILADFLTIEAH-KPLSEIKLVFTGDTRNNMSYALMYGAAKMGMHFVA 182
Query: 183 ISPESLQPALEIQKLARKYAMKS 205
+ P+SL+P +I K ++Y+ ++
Sbjct: 183 LGPDSLKPDEDILKEMQEYSKET 205
dbj|BAA35119| (AB020737) ornithine carbamoyltransferase [Aspergillus oryzae]
Length = 372
Score = 170 bits (426), Expect = 2e-41
Identities = 116/330 (35%), Positives = 167/330 (50%), Gaps = 36/330 (10%)
Query: 2 FQGRSFLKEIDFSKDELLYLI-DFAIHLKKLKKEHIQHKYL---LDKNIALIFEKTSXXX 57
F R FL D + E L+ + + H + +K I L + +A++F K S
Sbjct: 44 FAPRHFLSIADLTSTEFATLVRNASSHKRTIKSGSIPQNLLGSMTGQTVAMLFSKRSTRT 103
Query: 58 XXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
V LG HP FLG +DIQLG ES+ D+A V+ SM I R K ++V LAK
Sbjct: 104 RISTEGAVVRLGGHPMFLGKDDIQLGVNESLYDSAVVISSMVSCIVARVGKHAEVADLAK 163
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHF---GH------LQDLTLAYVGDGRNNVANS 168
S PV N L D +HP Q +ADF TI E F H L+ L +A+VGD NNV
Sbjct: 164 HSTVPVINALCDSFHPLQAIADFQTIYETFTPKAHRSDSLGLEGLKIAWVGDA-NNVLFD 222
Query: 169 LLVTGAILGVNITIISPESLQ---PALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY 225
+ + +G++I + +P+ + P LE+ K A K I ++ ADI+
Sbjct: 223 MAIAATKMGIDIAVATPKGYEIPAPMLELIKQASNGVSKPGKIIETNVPEEAVKGADILV 282
Query: 226 TDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKEIK 284
TD WVSMG+EA++ KR+K + +QI ++ ++ N+ + FMHCLP +
Sbjct: 283 TDTWVSMGQEAESIKRVKDFEGFQITSELAKRGGANEGWKFMHCLPRHPE---------- 332
Query: 285 ENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
EV+DEVF S S+VF +AENR+
Sbjct: 333 --------EVSDEVFYSPRSLVFPEAENRL 354
sp|P11066|OTC_ASPNG ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|279489|pir||OWASG ornithine
carbamoyltransferase (EC 2.1.3.3) precursor -
Aspergillus niger >gi|166492 (M19158) ornithine
carbamoyl transferase precursor [Aspergillus niger]
>gi|225926|prf||1403322A Orn carbamoyl transferase
[Aspergillus niger]
Length = 370
Score = 169 bits (423), Expect = 4e-41
Identities = 113/332 (34%), Positives = 171/332 (51%), Gaps = 39/332 (11%)
Query: 2 FQGRSFLKEIDFSKDELLYLI-DFAIHLKKLKKEHIQ---HKYLLDKNIALIFEKTSXXX 57
F R L D + E L+ + + H + +K I H L K +A++F K S
Sbjct: 41 FAPRHLLSIADLTPTEFATLVRNASSHKRAIKSGSIPQSLHGALSGKTVAMMFSKRSTRT 100
Query: 58 XXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
V +G HP FLG +DIQLG ES+ DTA V+ SM + I R K +DV LAK
Sbjct: 101 RISTEGAVVQMGGHPMFLGKDDIQLGVNESLYDTAVVVSSMVECIVARVGKHADVADLAK 160
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHFG----------HLQDLTLAYVGDGRNNVAN 167
S +PV N L D +HP Q +ADF TI EHF L L +A+VGD NNV
Sbjct: 161 HSTKPVINALCDSYHPLQAIADFQTISEHFAASGKGKLEGLGLNGLKIAWVGDA-NNVLF 219
Query: 168 SLLVTGAILGVNITIISPESLQPALEIQKLARK--YAMKSRSKISIRTDL--NGLENADI 223
+ ++ +GV++ + +P+ + E+ ++ K +KS K+ ++T++ ++ AD+
Sbjct: 220 DMAISARKMGVDVAVATPKGYEIPKEMLEIIEKAGEGVKSPGKL-VQTNVPEEAVKGADV 278
Query: 224 VYTDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKE 282
+ TD WVSMG+E + AKR++ +QI ++ ++ + + FMHCLP +
Sbjct: 279 LVTDTWVSMGQEEEAAKRLRDFAGFQITSELAKRGGAKEGWRFMHCLPRHPE-------- 330
Query: 283 IKENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
EV DEVF S+VF +AENR+
Sbjct: 331 ----------EVADEVFYGHRSLVFPEAENRL 352
sp|Q02047|OTCA_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-SENSITIVE, ANABOLIC
(OTCASE) >gi|540984|pir||S41291 ornithine
carbamoyltransferase (EC 2.1.3.3) - Pseudomonas syringae
>gi|151405 (M99382) phaseolotoxin sensitive octase
[Pseudomonas syringae] >gi|440574|emb|CAA54264| (X76945)
orthinine carbamoyltransferase [Pseudomonas syringae]
Length = 306
Score = 169 bits (423), Expect = 4e-41
Identities = 102/317 (32%), Positives = 161/317 (50%), Gaps = 25/317 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R FL +D++ DELL LI + LK L+ + L ++ + +IFEK+S
Sbjct: 4 RHFLSMMDYTPDELLGLIRRGVELKDLRIRGELFEPLKNRVLGMIFEKSSTRTRLSFEAG 63
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
+ LG FL D QLG+ E I+D+AKV+ M D + R + S++ A +S PV
Sbjct: 64 MIQLGGQAIFLSHRDTQLGRGEPIADSAKVMSRMLDAVMIRTYAHSNLTEFAANSRVPVI 123
Query: 125 NGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIIS 184
NGL+D HP Q+LAD T EH G ++ T+A++GDG NN+ NS + + +
Sbjct: 124 NGLSDDLHPCQLLADMQTFLEHRGSIKGKTVAWIGDG-NNMCNSYIEAAIQFDFQLRVAC 182
Query: 185 PESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKL 244
P +P E LA +R + A +V TDVW SMG+E +TA+R+ L
Sbjct: 183 PAGYEPNPEFLALA------GERVTIVRDPKAAVAGAHLVSTDVWTSMGQEEETARRMAL 236
Query: 245 LKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNS 304
+Q+ + ++ + K+ +FMHCLP+ E++ ++ + S
Sbjct: 237 FAPFQVTRASLD-LAEKDVLFMHCLPAHRG-----------------EEISVDLLDDSRS 278
Query: 305 VVFEQAENRMHTIKEVM 321
V ++QAENR+H K ++
Sbjct: 279 VAWDQAENRLHAQKALL 295
sp|Q00291|OTC_ASPTE ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|1054631|emb|CAA91554| (Z67741)
ornithine carbamoyltransferase [Aspergillus terreus]
Length = 361
Score = 167 bits (419), Expect = 1e-40
Identities = 115/330 (34%), Positives = 166/330 (49%), Gaps = 36/330 (10%)
Query: 2 FQGRSFLKEIDFSKDELLYLI-DFAIHLKKLKKEHIQHKY---LLDKNIALIFEKTSXXX 57
F R L D + E L+ + + H +K I L K +A++F K S
Sbjct: 33 FAPRHLLSIADLTPTEFTTLVRNASSHKHSIKSGSIPTNLQGSLAGKTVAMMFSKRSTRT 92
Query: 58 XXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
V LG HP FLG +DIQLG ES+ DTA V+ SM I R K ++V LAK
Sbjct: 93 RISTEGATVQLGGHPMFLGKDDIQLGVNESLYDTAVVVSSMVSAIVARVGKHAEVADLAK 152
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHF---GH------LQDLTLAYVGDGRNNVANS 168
S PV N L D +HP Q +ADF TI E F H L+ L +A+VGD NNV
Sbjct: 153 HSTVPVINALCDSFHPLQAIADFQTIYETFTPKAHHLSSLGLEGLKIAWVGDA-NNVLFD 211
Query: 169 LLVTGAILGVNITIISPESLQPALEIQKL---ARKYAMKSRSKISIRTDLNGLENADIVY 225
+ ++ A +GV++ + +P+ + +++L A K I ++ ADI+
Sbjct: 212 MAISAAKMGVDLAVATPKGYEIPASMRELIQEAGKGVANPGKLIQTNVPEEAVKKADILV 271
Query: 226 TDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKEIK 284
TD WVSMG+E ++ KR+K + +QI ++ ++ N+N+ FMHCLP +
Sbjct: 272 TDTWVSMGQEEESLKRMKAFEGFQITSELAKRGGANENWKFMHCLPRHPE---------- 321
Query: 285 ENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
EV+DEVF S S+VF +AENR+
Sbjct: 322 --------EVSDEVFYSNRSLVFPEAENRL 343
sp|O50039|OTC_ARATH ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|2764518|emb|CAA04115.1| (AJ000476)
Ornithine carbamoyltransferase [Arabidopsis thaliana]
>gi|2764737|emb|CAA05510.1| (AJ002524) ornithine
carbamoyltransferase [Arabidopsis thaliana]
Length = 375
Score = 166 bits (417), Expect = 2e-40
Identities = 113/331 (34%), Positives = 169/331 (50%), Gaps = 30/331 (9%)
Query: 3 QGRSFLKEI----DFSKDELLYLIDFAIHLKKLKKEHIQHKYL--LDKNIALIFEKTSXX 56
+G+S LK+ DF + ++D A +K L K + YL K++++IF K S
Sbjct: 67 KGKSDLKDFLAIDDFDTATIKTILDKASEVKALLKSG-ERNYLPFKGKSMSMIFAKPSMR 125
Query: 57 XXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILA 116
LG H +LGPNDIQ+GK+E D A+VL D I R F D+ LA
Sbjct: 126 TRVSFETGFFLLGGHALYLGPNDIQMGKREETPDVARVLSRYNDIIMARVFAHQDILDLA 185
Query: 117 KDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAIL 176
S PV NGLTD HP Q++AD +T+ +H G + + YVGDG NN+ +S L +++
Sbjct: 186 NYSSVPVVNGLTDHNHPCQIMADALTMIKHIGQFERKKVVYVGDG-NNMVHSWLELASVI 244
Query: 177 GVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEE 235
+ P+ +P E A++ + SKI I D + AD+VY+DVW SMG++
Sbjct: 245 PFHFVCACPKGYEPDKERVSKAKQAGL---SKIEITNDPKEAVIGADVVYSDVWASMGQK 301
Query: 236 AQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
+ R K + +Q+++ ++ K+ + FMHCLP+ +EVT
Sbjct: 302 DEAEARRKAFQGFQVDEALM-KLAGQKAYFMHCLPAERG-----------------VEVT 343
Query: 296 DEVFNSKNSVVFEQAENRMHTIKEVMAATLG 326
+ V + S+VF QAENRMH +M LG
Sbjct: 344 NGVVEAPYSIVFPQAENRMHAQYAIMLHLLG 374
sp|Q59283|OTCA_CORGL ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (OTCASE) >gi|3273712
(AF049897) ornithine carbamoyltransferase
[Corynebacterium glutamicum] >gi|4104080 (AF031518)
ornithine carbamolytransferase [Corynebacterium
glutamicum]
Length = 319
Score = 166 bits (416), Expect = 2e-40
Identities = 109/332 (32%), Positives = 163/332 (48%), Gaps = 28/332 (8%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
Q R FL + D + E ++ A KLK + L K++A++F+KTS
Sbjct: 6 QVRHFLADDDLTPAEQAEVLTLAA---KLKAAPFSERPLEGPKSVAVLFDKTSTRTRFSF 62
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG H + Q+GK ES+ DTA VL + I +R + S+ +A+ S
Sbjct: 63 DAGIAHLGGHAIVVDSGSSQMGKGESLQDTAAVLSRYVEAIVWRTYAHSNFHAMAETSTV 122
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHFGH------LQDLTLAYVGDGRNNVANSLLVTGAI 175
P+ N L+D HP Q+LAD TI E+ L+ Y+GDG NN+ANS ++ A
Sbjct: 123 PLVNSLSDDLHPCQILADLQTIVENLSPEEGPAGLKGKKAVYLGDGDNNMANSYMIGFAT 182
Query: 176 LGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEE 235
G++I+II+PE QP E + A K ++ +K+ + L+ + AD+V TD WVSMG E
Sbjct: 183 AGMDISIIAPEGFQPRAEFVERAEKRGQETGAKVVVTDSLDEVAGADVVITDTWVSMGME 242
Query: 236 AQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVT 295
R YQ+N +V+ K N IF+HCLP++ EV
Sbjct: 243 NDGIDRTTPFVPYQVNDEVMAK-ANDGAIFLHCLPAYRG-----------------KEVA 284
Query: 296 DEVFNSKNSVVFEQAENRMHTIKEVMAATLGD 327
V + S VF++AENR+H K ++ L +
Sbjct: 285 ASVIDGPASKVFDEAENRLHAQKALLVWLLAN 316
gi|2984023 (AE000752) ornithine carbamoyltransferase [Aquifex aeolicus]
Length = 306
Score = 166 bits (416), Expect = 2e-40
Identities = 104/319 (32%), Positives = 166/319 (51%), Gaps = 26/319 (8%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R F+ D S E ++ + +KK ++E K L K IAL+F K S
Sbjct: 3 RDFVDLWDLSPKEAWEIVKKTLKVKKGEEE--LGKPLSGKTIALLFTKPSTRTRVSFEVG 60
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVW 124
LG + F ++Q+ + E + DTA+ L DG+ R + ++ A + PV
Sbjct: 61 IYQLGGNSLFFQEKELQVSRGEDVRDTARTLSKYVDGVIVRNHSHTWLKEFANFASVPVI 120
Query: 125 NGLTDVWHPTQMLADFMTIKEHFG-HLQDLTLAYVGDGRNNVANSLLVTGAILGVNITII 183
N LT++ HP Q+L+D T+ EH+G L++L +AYVGDG NNV N+L+V + G+ + +
Sbjct: 121 NALTNMSHPCQILSDVFTLYEHYGEELKNLKVAYVGDG-NNVCNTLMVGAGMFGLKLFVA 179
Query: 184 SPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRI 242
+PE +P K A +++ ++ + + + + +++AD+VYTDVWVSMGEE K I
Sbjct: 180 TPEGYEPNSYYYKKALEFSKENGGSVELTNNPVESVKDADVVYTDVWVSMGEE---NKNI 236
Query: 243 KLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSK 302
+ YQ+N+K++ + MHCLP+ E+T+EVF
Sbjct: 237 EAFLPYQVNEKLL-SFAKSSVKVMHCLPA-----------------KKGQEITEEVFEKN 278
Query: 303 NSVVFEQAENRMHTIKEVM 321
+F QAENR+HT K +M
Sbjct: 279 ADFIFTQAENRLHTQKTLM 297
pir||OWASN ornithine carbamoyltransferase (EC 2.1.3.3) precursor - Emericella
nidulans
Length = 397
Score = 166 bits (416), Expect = 2e-40
Identities = 115/330 (34%), Positives = 166/330 (49%), Gaps = 36/330 (10%)
Query: 2 FQGRSFLKEIDFSKDELLYLI-DFAIHLKKLKKEHIQHKY---LLDKNIALIFEKTSXXX 57
F R FL D S E L+ + + H + +K + LL K +A+IF K S
Sbjct: 69 FAPRHFLSIADLSPSEFATLVRNASSHKRAIKSGSMPQNLQGSLLGKTVAMIFSKRSTRT 128
Query: 58 XXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
V +G HP FLG +DIQLG ES+ DT+ V+ SM I R K ++V LAK
Sbjct: 129 RVSTEGAVVQMGGHPMFLGKDDIQLGVNESLYDTSVVISSMVSCIVARVGKHAEVADLAK 188
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHF---GH------LQDLTLAYVGDGRNNVANS 168
S PV N L D +HP Q +ADF TI E F H L+ L +A+VGD NNV
Sbjct: 189 HSSVPVINALCDSFHPLQAVADFQTIYEAFTPKAHHLSSLGLEGLKIAWVGDA-NNVLFD 247
Query: 169 LLVTGAILGVNITIISPESLQ---PALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY 225
+ + +GV+I + +P+ + LE+ K A + K + +++ADI+
Sbjct: 248 MAIAATKMGVDIAVATPKGYEIPPHMLELIKSAGEGVSKPGKLLQTNIPEEAVKDADILV 307
Query: 226 TDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKEIK 284
TD WVSMG+E + A+R+K +QI ++ ++ + + FMHCLP +
Sbjct: 308 TDTWVSMGQEEEKAQRLKEFDGFQITAELAKRGGAKEGWKFMHCLPRHPE---------- 357
Query: 285 ENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
EV+DEVF S S+VF +AENR+
Sbjct: 358 --------EVSDEVFYSNRSLVFPEAENRL 379
sp|P11803|OTC_EMENI ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|168017 (M29819) ornithine
carbamoyltransferase [Emericella nidulans]
Length = 359
Score = 166 bits (416), Expect = 2e-40
Identities = 115/330 (34%), Positives = 166/330 (49%), Gaps = 36/330 (10%)
Query: 2 FQGRSFLKEIDFSKDELLYLI-DFAIHLKKLKKEHIQHKY---LLDKNIALIFEKTSXXX 57
F R FL D S E L+ + + H + +K + LL K +A+IF K S
Sbjct: 31 FAPRHFLSIADLSPSEFATLVRNASSHKRAIKSGSMPQNLQGSLLGKTVAMIFSKRSTRT 90
Query: 58 XXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
V +G HP FLG +DIQLG ES+ DT+ V+ SM I R K ++V LAK
Sbjct: 91 RVSTEGAVVQMGGHPMFLGKDDIQLGVNESLYDTSVVISSMVSCIVARVGKHAEVADLAK 150
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHF---GH------LQDLTLAYVGDGRNNVANS 168
S PV N L D +HP Q +ADF TI E F H L+ L +A+VGD NNV
Sbjct: 151 HSSVPVINALCDSFHPLQAVADFQTIYEAFTPKAHHLSSLGLEGLKIAWVGDA-NNVLFD 209
Query: 169 LLVTGAILGVNITIISPESLQ---PALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY 225
+ + +GV+I + +P+ + LE+ K A + K + +++ADI+
Sbjct: 210 MAIAATKMGVDIAVATPKGYEIPPHMLELIKSAGEGVSKPGKLLQTNIPEEAVKDADILV 269
Query: 226 TDVWVSMGEEAQTAKRIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKEIK 284
TD WVSMG+E + A+R+K +QI ++ ++ + + FMHCLP +
Sbjct: 270 TDTWVSMGQEEEKAQRLKEFDGFQITAELAKRGGAKEGWKFMHCLPRHPE---------- 319
Query: 285 ENYNLNELEVTDEVFNSKNSVVFEQAENRM 314
EV+DEVF S S+VF +AENR+
Sbjct: 320 --------EVSDEVFYSNRSLVFPEAENRL 341
sp|P14995|OTC_PACTA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|279490|pir||OWCKPT ornithine
carbamoyltransferase (EC 2.1.3.3) precursor - yeast
(Pachysolen tannophilus) >gi|3267|emb|CAA33458| (X15412)
ornithine carbamoyltransferase preprotein [Pachysolen
tannophilus]
Length = 347
Score = 163 bits (409), Expect = 2e-39
Identities = 105/323 (32%), Positives = 172/323 (52%), Gaps = 25/323 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQH--KYLLDKNIALIFEKTSXXXXXXXX 62
R + ++ S EL L++ A + K+ + + + + L K ++LIF K S
Sbjct: 33 RHLVSMLELSIKELESLVNRAAYHKQQIRSGLVNTTQPLSGKTVSLIFNKRSTRTRVSSE 92
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
LG P FLG +DIQLG ES+ DT K++ SM I R K SD++ + K S P
Sbjct: 93 GAAAYLGGCPMFLGKDDIQLGVNESLHDTTKIISSMTSSIFARVNKHSDIQEMCKYSSVP 152
Query: 123 VWNGLTDVWHPTQMLADFMTIKEHFGH-LQDLTLAYVGDGRNNVANSLLVTGAILGVNIT 181
+ N L D +HP Q + D +TIKE FG+ + L LA++GD NNV N L + G++++
Sbjct: 153 IINALCDTFHPLQAITDILTIKESFGNTTKGLKLAWIGD-VNNVINDLCIAALKSGIDVS 211
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAK 240
I P L+ I A++ + ++ + + I D L + A+++ TD W+SMG+E + +
Sbjct: 212 IAVPSGLKFEELILSGAKEISAENGTTLKITNDPLEAINGANVIVTDTWISMGQEDERLQ 271
Query: 241 RIKLLKSYQINQKVVEK-IINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
++K + +QI ++++ K +N+ FMHCLP + EV DEVF
Sbjct: 272 KLKQFEGFQITKEMISKGKAAENWKFMHCLPRHPE------------------EVHDEVF 313
Query: 300 -NSKNSVVFEQAENRMHTIKEVM 321
+ + S+VFE+ ENR++ V+
Sbjct: 314 YDEERSLVFEEGENRLYAAIAVL 336
dbj|BAA05061| (D26062) ornithine carbamoyltransferase [Coriolus hirsutus]
Length = 375
Score = 158 bits (396), Expect = 5e-38
Identities = 107/313 (34%), Positives = 152/313 (48%), Gaps = 46/313 (14%)
Query: 41 LLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFD 100
L K+IAL+F K S + LG FLG DIQLG E++ D+A+V+G M
Sbjct: 65 LFSKSIALLFSKRSTRTRLSAETAALLLGGQALFLGREDIQLGVNETVPDSARVIGGMCQ 124
Query: 101 GIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEH-------------- 146
GI R S++E LA+ S PV N L+ +WHPTQ+LAD +T+ EH
Sbjct: 125 GIFARVGDHSEIEELARYSPVPVLNALSSLWHPTQVLADILTLHEHAALFDPASASPTPS 184
Query: 147 -----------FGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPALEIQ 195
G ++ LT+AYVGD NV + +LVT LG + + SPE+ +
Sbjct: 185 AADAFSQKYTKLGEVRPLTVAYVGDSA-NVLHDMLVTYPRLGHQLRVASPENDRYRAPKA 243
Query: 196 KLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQINQKV 254
R + I D ++ AD+V TD W+SMG+EA+ A+R+K YQ+ + +
Sbjct: 244 VWDRVVELGCDKNIFWTADPRAAVKGADLVVTDTWISMGQEAEKAQRLKDFAGYQVTEAL 303
Query: 255 V-EKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENR 313
E N ++ FMHCLP D EV DEVF S+VF++++NR
Sbjct: 304 CREGGANPDWKFMHCLPRKQD------------------EVDDEVFYGPRSLVFQESDNR 345
Query: 314 MHTIKEVMAATLG 326
TI + G
Sbjct: 346 KWTIMALFDLLFG 358
sp|P78605|OTC_CORHI ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (OTCASE) (ORNITHINE
TRANSCARBAMYLASE) >gi|1799542|dbj|BAA05060| (D26061)
ornithine carbamoyltransferase [Coriolus hirsutus]
Length = 375
Score = 158 bits (396), Expect = 5e-38
Identities = 107/313 (34%), Positives = 152/313 (48%), Gaps = 46/313 (14%)
Query: 41 LLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFD 100
L K+IAL+F K S + LG FLG DIQLG E++ D+A+V+G M
Sbjct: 65 LFSKSIALLFSKRSTRTRLSAETAALLLGGQALFLGREDIQLGVNETVPDSARVIGGMCQ 124
Query: 101 GIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEH-------------- 146
GI R S++E LA+ S PV N L+ +WHPTQ+LAD +T+ EH
Sbjct: 125 GIFARVGDHSEIEELARYSPVPVLNALSSLWHPTQVLADILTLHEHAALFDPASASPTPS 184
Query: 147 -----------FGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPALEIQ 195
G ++ LT+AYVGD NV + +LVT LG + + SPE+ +
Sbjct: 185 AADAFSQKYTKLGEVRPLTVAYVGDSA-NVLHDMLVTYPRLGHQLRVASPENDKYRAPKA 243
Query: 196 KLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQINQKV 254
R + I D ++ AD+V TD W+SMG+EA+ A+R+K YQ+ + +
Sbjct: 244 VWDRVVELGCDKNIFWTADPRAAVKGADLVVTDTWISMGQEAEKAQRLKDFAGYQVTEAL 303
Query: 255 V-EKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENR 313
E N ++ FMHCLP D EV DEVF S+VF++++NR
Sbjct: 304 CREGGANPDWKFMHCLPRKQD------------------EVDDEVFYGPRSLVFQESDNR 345
Query: 314 MHTIKEVMAATLG 326
TI + G
Sbjct: 346 KWTIMALFDLLFG 358
sp|Q48296|OTC_HALSA ORNITHINE CARBAMOYLTRANSFERASE (OTCASE) >gi|1084274|pir||S49261
ornithine carbamoyltransferase (EC 2.1.3.3) -
Halobacterium halobium >gi|550341|emb|CAA57356| (X81712)
ornithine carbamoyltransferase [Halobacterium halobium]
>gi|984742|emb|CAA56906| (X80931) ornithine
transcarbamoylase [Halobacterium salinarum]
Length = 295
Score = 152 bits (379), Expect = 5e-36
Identities = 106/311 (34%), Positives = 159/311 (51%), Gaps = 31/311 (9%)
Query: 12 DFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAH 71
D +E+ L+D A +K+ E + +K++ ++F K S LG H
Sbjct: 9 DVESEEIEQLLDLAASMKENPGEF--SGVMDNKSLVMLFAKPSTRTRLSFETGMTQLGGH 66
Query: 72 PEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVW 131
F QL + E ISD ++V+ D I R F+ ++ LA+++ PV NGLTD
Sbjct: 67 GIFFEMGSSQLSRGEPISDVSQVMSRYEDAIMARLFEHDEMMELAENADVPVVNGLTDFL 126
Query: 132 HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPESLQPA 191
HP Q L D T++E L TLA+VGDG NNVA+SL+ A +GV+ I +PE ++P
Sbjct: 127 HPCQALTDMFTMQEK-DRLD--TLAFVGDG-NNVAHSLMQASAKMGVDCRIATPEGMEPD 182
Query: 192 LEIQKLARKYAMKSRSKISIRTD-LNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQI 250
EIQ S + +++ D ++ A VY DV+VSMGEE Q +++ +QI
Sbjct: 183 EEIQDRV------SDANVTVTNDPYEAVDGATAVYGDVFVSMGEEEQREEKLAEFDGFQI 236
Query: 251 NQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQA 310
+Q +++ + IFMHCLP+ EVT EV + SV+F+QA
Sbjct: 237 DQDLMD-AARDDAIFMHCLPAHRG-----------------EEVTAEVADGPQSVIFDQA 278
Query: 311 ENRMHTIKEVM 321
ENRMH K ++
Sbjct: 279 ENRMHVQKAIV 289
sp|P16964|OTCX_STRPY PROBABLE ORNITHINE CARBAMOYLTRANSFERASE (OTC) >gi|80043|pir||PE0009
ornithine carbamoyltransferase homolog - Streptococcus
pyogenes (fragment) >gi|217042|dbj|BAA02940| (D13790)
ORF3 [Streptococcus pyogenes]
Length = 107
Score = 140 bits (350), Expect = 1e-32
Identities = 69/104 (66%), Positives = 77/104 (73%)
Query: 1 MFQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXX 60
+FQGRSFL E DF++ EL YLIDF+ HLK LKK + H YL KNIAL+FEKTS
Sbjct: 4 VFQGRSFLAEKDFTRAELEYLIDFSAHLKDLKKRGVPHHYLEGKNIALLFEKTSTRTRAA 63
Query: 61 XXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEF 104
+DLGAHPE+LG NDIQLGKKES DTAKVLG MFDGIEF
Sbjct: 64 FTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFDGIEF 107
gi|3399775 (AF069576) ornithine carbamoyltransferase [Giardia intestinalis]
Length = 327
Score = 120 bits (299), Expect = 1e-26
Identities = 97/327 (29%), Positives = 147/327 (44%), Gaps = 38/327 (11%)
Query: 17 ELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPEF-- 74
EL YLID A+ +KK ++ +K + F K S LG H +
Sbjct: 19 ELAYLIDRALDMKKNPAKYTARA--ANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYE 76
Query: 75 LGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWNGLTDVWHPT 134
LG N +G KE++ DTA+V M D R + + +A+ + P N L D HP
Sbjct: 77 LGANS-NVGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCINALDDFGHPL 135
Query: 135 QMLADFMTIKEHF-------GHLQDLTLAYVGDGRNNVANSLLVTGAILGVNITIISPE- 186
QM+ DFMTIKE F + + AY GD NNV L+ A+LG+ + P+
Sbjct: 136 QMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDH 195
Query: 187 -SLQPALEI----QKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMG-EEAQTAK 240
+P E+ +++ K+ KI G E D+VYTD W+S + Q
Sbjct: 196 KDFKPIKEVIDECEEIIAKHGTGGSIKI-FHDCKKGCEGVDVVYTDSWMSYHITKEQKEA 254
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
R+K+L +Q++ V+ + +K IFM+CLP+ E T V +
Sbjct: 255 RLKVLTPFQVDDAVM-AVTSKRSIFMNCLPA-----------------TRGEEQTASVID 296
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLGD 327
SV +++A NR+H+ V+ L D
Sbjct: 297 GPKSVCYDEAGNRLHSAMAVLDFFLHD 323
emb|CAA60100| (X86157) ornithine carbamoyltransferase [Corynebacterium
glutamicum]
Length = 201
Score = 104 bits (256), Expect = 1e-21
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLD-KNIALIFEKTSXXXXXXX 61
Q R FL + D + E ++ A KLK + L K++A++F+KTS
Sbjct: 6 QVRHFLADDDLTPAEQAEVLTLAA---KLKAAPFSERPLEGPKSVAVLFDKTSTRTRFSF 62
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG H + Q+GK ES+ DTA VL + I +R + S+ +A+ S
Sbjct: 63 DAGIAHLGGHAIVVDSGSSQMGKGESLQDTAAVLSRYVEAIVWRTYAHSNFHAMAETSTV 122
Query: 122 PVWNGLTDVWHPTQMLADFMTIKEHF------GHLQDLTLAYVGDGRNNVANSLLVTGAI 175
P+ N L+D HP Q+LAD TI E+ L+ Y+GDG NN+ANS ++ A
Sbjct: 123 PLVNSLSDDLHPCQILADLQTIVENLSPEEGPAGLKGKKAVYLGDGDNNMANSYMIGFAT 182
Query: 176 LGVNITIISPESLQPALE 193
G++I+II+PE QP E
Sbjct: 183 AGMDISIIAPEGFQPRAE 200
sp|O58451|PYRB_PYRHO ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|3257128|dbj|BAA29811| (AP000003) 308aa long
hypothetical aspartate carbamoyltransferase catalytic
chain [Pyrococcus horikoshii]
Length = 308
Score = 90.1 bits (220), Expect = 2e-17
Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 27/328 (8%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
++GR + DFSK+++ ++ A L+K KE Q +Y K +A +F + S
Sbjct: 3 WKGRDVISIRDFSKEDIEVVLSTAERLEKEMKEKGQLEYAKGKILATLFFEPSTRTRLSF 62
Query: 62 XXXXVDLGAHP-EFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSG 120
LG F + + K ES+ DT K + D I R K+ + A+ +
Sbjct: 63 ESAMHRLGGSVIGFAEASTSSVKKGESLRDTIKTVEQYSDVIVIRHPKEGAARLAAEVAD 122
Query: 121 RPVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAILGV 178
PV N G HPTQ L D TIK+ FG + L + +GD + +SL A V
Sbjct: 123 IPVINAGDGSNQHPTQTLLDLYTIKKEFGTIDGLKIGLLGDLKYGRTVHSLAEALAFYDV 182
Query: 179 NITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQT 238
+ +ISPE L+ I + R+ MK + + L D++Y +
Sbjct: 183 ELYLISPELLRMPKHIVEELRERGMKIVETTKLEEVIGEL---DVLYV-TRIQKERFPDE 238
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEV 298
+ +K+ SYQ+N K++E + + MH LP +++ EV K
Sbjct: 239 QEYLKVKGSYQVNLKILEN-VKDSLRIMHPLPRVDEIHPEVDK----------------- 280
Query: 299 FNSKNSVVFEQAENRMHTIKEVMAATLG 326
+K+++ F+Q N + ++A LG
Sbjct: 281 --TKHAIYFKQVFNGVPVRMALLALVLG 306
sp|P77918|PYRB_PYRAB ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|1572497 (U61765) aspartate transcarbamylase
catalytic chain [Pyrococcus abyssi]
>gi|5458745|emb|CAB50232.1| (AJ248287) aspartate
carbamoyltransferase, catalytic subunit (pyrB)
[Pyrococcus abyssi]
Length = 308
Score = 88.2 bits (215), Expect = 9e-17
Identities = 89/328 (27%), Positives = 143/328 (43%), Gaps = 27/328 (8%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
++GR + DFSK+++ ++ A L++ KE Q +Y K +A +F + S
Sbjct: 3 WKGRDVISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSF 62
Query: 62 XXXXVDLG-AHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSG 120
LG A F + + K ES+ DT K + D I R K+ + A+ +
Sbjct: 63 ESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAE 122
Query: 121 RPVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAILGV 178
PV N G HPTQ L D TIK+ FG + L + +GD + +SL V
Sbjct: 123 VPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDV 182
Query: 179 NITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQT 238
+ +ISPE L+ I + R+ MK ++ + L D++Y +
Sbjct: 183 ELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKL---DVLYV-TRIQKERFPDE 238
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEV 298
+ +K+ SYQ+N KV+EK ++ I MH LP E+ EV
Sbjct: 239 QEYLKVKGSYQVNLKVLEKAKDELRI-MHPLPRVD-------------------EIHPEV 278
Query: 299 FNSKNSVVFEQAENRMHTIKEVMAATLG 326
N+K+++ F Q N + ++A LG
Sbjct: 279 DNTKHAIYFRQVFNGVPVRMALLALVLG 306
sp|Q91437|PYR1_SQUAC CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE
SYNTHASE ; ASPARTATE CARBAMOYLTRANSFERASE ;
DIHYDROOROTASE ] >gi|2118285|pir||A57541 pyrimidine
synthesis multifunctional protein CAD - spiny dogfish
>gi|951096 (U18868) multifunctional protein CAD [Squalus
acanthias]
Length = 2242
Score = 79.6 bits (193), Expect = 3e-14
Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 26/327 (7%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F G+ L F+KD+L +L + A +L+ ++ L K +A +F + S
Sbjct: 1938 FVGQHILSVKRFTKDQLSHLFNVAHNLRLTVQKDRSLDILKGKVMASMFYEVSTRTSSSF 1997
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + K ES+ D+ + + D + R + VE+ AK S +
Sbjct: 1998 RAAMHRLGGSVIHFSEATSSVQKGESLLDSVQTMSCYVDVVVLRHPEPGAVELAAKHSRK 2057
Query: 122 PVWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVN 179
P+ N V HPTQ L D TI+E G + +T+ VGD ++ +SL + VN
Sbjct: 2058 PIINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLAYLLTLYRVN 2117
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTA 239
+ ++P +L+ I + +K S+ L + D++Y + A
Sbjct: 2118 LRYVTPRNLRMPPNIIRFLASRGIKQEEFDSLE---EALPDTDVLYM-TRIQKERFASEE 2173
Query: 240 KRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVF 299
+ + + ++ K K + MH LP ++++ EV + + Y
Sbjct: 2174 EYEACFGQFILTPHIMTK-GKKKMVVMHPLPRVNEVSVEVDSDPRAAY------------ 2220
Query: 300 NSKNSVVFEQAENRMHTIKEVMAATLG 326
F QAEN M+ ++A LG
Sbjct: 2221 -------FRQAENGMYVRMALLATVLG 2240
ref|NP_004332.1|| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
dihydroorotase >gi|1709955|sp|P27708|PYR1_HUMAN CAD
PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT
CARBAMOYL-PHOSPHATE SYNTHASE ; ASPARTATE
CARBAMOYLTRANSFERASE ; DIHYDROOROTASE ]
>gi|1228049|dbj|BAA11423| (D78586) multifunctional
protein CAD [Homo sapiens]
Length = 2225
Score = 76.9 bits (186), Expect = 2e-13
Identities = 73/325 (22%), Positives = 130/325 (39%), Gaps = 26/325 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 1923 GQHILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 1982
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 1983 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 2042
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + +T+ VGD ++ +SL V++
Sbjct: 2043 INAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLR 2102
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKR 241
++P SL+ ++ K SI L + D++Y + T +
Sbjct: 2103 YVAPPSLRMPPTVRAFVASRGTKQEEFESIE---EALPDTDVLYM-TRIQKERFGSTQEY 2158
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+ + ++ + K + MH +P ++++ EV + + Y
Sbjct: 2159 EACFGQFILTPHIMTR-AKKKMVVMHPMPRVNEISVEVDSDPRAAY-------------- 2203
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
F QAEN M+ ++A LG
Sbjct: 2204 -----FRQAENGMYIRMALLATVLG 2223
pir||A36240 pyrimidine synthesis protein CAD - human (fragment) >gi|179770
(M38561) CAD [Homo sapiens]
Length = 474
Score = 76.9 bits (186), Expect = 2e-13
Identities = 73/325 (22%), Positives = 130/325 (39%), Gaps = 26/325 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 172 GQHILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 231
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 232 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 291
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + +T+ VGD ++ +SL V++
Sbjct: 292 INAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLR 351
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKR 241
++P SL+ ++ K SI L + D++Y + T +
Sbjct: 352 YVAPPSLRMPPTVRAFVASRGTKQEEFESIE---EALPDTDVLYM-TRIQKERFGSTQEY 407
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+ + ++ + K + MH +P ++++ EV + + Y
Sbjct: 408 EACFGQFILTPHIMTR-AKKKMVVMHPMPRVNEISVEVDSDPRAAY-------------- 452
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
F QAEN M+ ++A LG
Sbjct: 453 -----FRQAENGMYIRMALLATVLG 472
gi|2625102 (AF031144) aspartate transcarbamoylase [Plasmodium falciparum]
Length = 339
Score = 76.1 bits (184), Expect = 4e-13
Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 37/328 (11%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+ +S + D +ELL ++ + +K+ K + KYL +K +F + S
Sbjct: 20 KNKSVINIDDVDDEELLAILYTSKQFEKILKNNEDSKYLENKVFCSVFLEPSTRTRCSFD 79
Query: 63 XXXVDLGAHP-EFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
+ LG+ N K E++ D K+L + DGI +R + +V+I S +
Sbjct: 80 AAILKLGSKVLNITDMNSTSFYKGETVEDAFKILSTYVDGIIYRDPSKKNVDIAVSSSSK 139
Query: 122 PVWN-GLTDVWHPTQMLADFMTIKEHFGHLQD------LTLAYVGDGRN-NVANSLLVTG 173
P+ N G HPTQ L DF TI +F + D L +A+VGD +N +SL
Sbjct: 140 PIINAGNGTGEHPTQSLLDFYTIHNYFPFILDRNINKKLNIAFVGDLKNGRTVHSLSKLL 199
Query: 174 AILGVNITIISPESLQPALEIQKL----ARKYAMKSRSKISIRTDL-NGLENADIVY-TD 227
+ V+ +S +SL +I +K S I +L GLE+ I+Y T
Sbjct: 200 SRYNVSFNFVSCKSLNIPKDIVNTITYNLKKNNFYSDDSIKYFDNLEEGLEDVHIIYMTR 259
Query: 228 VWVSMGEEAQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
+ + + K ++ ++ K +E + I +H LP
Sbjct: 260 IQKERFTDVDEYNQYK--NAFILSNKTLENTRDDTKI-LHPLP----------------- 299
Query: 288 NLNELEVTDEVFNSKNSVVFEQAENRMH 315
+NE++V EV ++ SV F QAEN ++
Sbjct: 300 RVNEIKV--EVDSNPKSVYFTQAENGLY 325
sp|P08955|PYR1_MESAU CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE
SYNTHASE ; ASPARTATE CARBAMOYLTRANSFERASE ;
DIHYDROOROTASE ] >gi|538556|pir||A23443 pyrimidine
synthesis multifunctional protein CAD - golden hamster
Length = 2225
Score = 76.1 bits (184), Expect = 4e-13
Identities = 73/325 (22%), Positives = 129/325 (39%), Gaps = 26/325 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 1923 GQHILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 1982
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 1983 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 2042
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + +T+ VGD ++ +SL V++
Sbjct: 2043 INAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLR 2102
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKR 241
++P SL+ + K SI L + D++Y + T +
Sbjct: 2103 YVAPPSLRMPPSVWDFVASRGTKQEEFESIE---EALPDTDVLYM-TRIQKERFGSTQEY 2158
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+ + ++ + K + MH +P ++++ EV + + Y
Sbjct: 2159 EACFGQFILTPHIMTR-AKKKMVVMHPMPRVNEISVEVDSDPRAAY-------------- 2203
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
F QAEN M+ ++A LG
Sbjct: 2204 -----FRQAENGMYIRMALLATVLG 2223
gi|387068 (M23652) CAD protein [Mesocricetus auratus]
Length = 452
Score = 76.1 bits (184), Expect = 4e-13
Identities = 73/325 (22%), Positives = 129/325 (39%), Gaps = 26/325 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 150 GQHILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 209
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 210 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 269
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + +T+ VGD ++ +SL V++
Sbjct: 270 INAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLR 329
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKR 241
++P SL+ + K SI L + D++Y + T +
Sbjct: 330 YVAPPSLRMPPSVWDFVASRGTKQEEFESIE---EALPDTDVLYM-TRIQKERFGSTQEY 385
Query: 242 IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNS 301
+ + ++ + K + MH +P ++++ EV + + Y
Sbjct: 386 EACFGQFILTPHIMTR-AKKKMVVMHPMPRVNEISVEVDSDPRAAY-------------- 430
Query: 302 KNSVVFEQAENRMHTIKEVMAATLG 326
F QAEN M+ ++A LG
Sbjct: 431 -----FRQAENGMYIRMALLATVLG 450
pir||QZDOP3 pyrimidine synthesis protein PYR1-3 - slime mold (Dictyostelium
discoideum) (fragments)
Length = 1481
Score = 74.5 bits (180), Expect = 1e-12
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 28/326 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ F++ +L L A ++ L K L K +A +F + S
Sbjct: 1178 GKHIFSVKQFNRKQLHALFGIAHEMRILVKRSGGSDLLKGKVLATLFYEPSTRTQCSFTA 1237
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + + K ESI+DT + L S D + R VE + + +P+
Sbjct: 1238 AMQRLGGSVVTVDNVSSSVAKGESIADTIQTLESYCDAVCMRHPAVGSVESAIQVAKKPI 1297
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + LT+ VGD ++ +SL+ A V I
Sbjct: 1298 INAGDGVGEHPTQALLDVFTIREELGTVNGLTITVVGDLKHGRTVHSLVRLLANYQVKIN 1357
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQTAK 240
+SP SL EI K + ++ + +I + L +++Y T V + + +
Sbjct: 1358 YVSPSSLSMPTEIIKELNEKGIEQKEYTNIESI---LPTTNVLYVTRVQKERFQSIEEYE 1414
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
++K S+ I + K + N I MH LP ++++ EV + + Y
Sbjct: 1415 KVK--DSFIITPHTLTK-ASDNMIVMHPLPRINEISPEVDSDPRAAY------------- 1458
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLG 326
F Q EN ++ ++A G
Sbjct: 1459 ------FRQMENGLYVRMSLLALVFG 1478
sp|P20054|PYR1_DICDI PROTEIN PYR1-3 [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE
SYNTHASE ; ASPARTATE CARBAMOYLTRANSFERASE ;
DIHYDROOROTASE ]
Length = 2185
Score = 74.5 bits (180), Expect = 1e-12
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 28/326 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ F++ +L L A ++ L K L K +A +F + S
Sbjct: 1882 GKHIFSVKQFNRKQLHALFGIAHEMRILVKRSGGSDLLKGKVLATLFYEPSTRTQCSFTA 1941
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + + K ESI+DT + L S D + R VE + + +P+
Sbjct: 1942 AMQRLGGSVVTVDNVSSSVAKGESIADTIQTLESYCDAVCMRHPAVGSVESAIQVAKKPI 2001
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + LT+ VGD ++ +SL+ A V I
Sbjct: 2002 INAGDGVGEHPTQALLDVFTIREELGTVNGLTITVVGDLKHGRTVHSLVRLLANYQVKIN 2061
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQTAK 240
+SP SL EI K + ++ + +I + L +++Y T V + + +
Sbjct: 2062 YVSPSSLSMPTEIIKELNEKGIEQKEYTNIESI---LPTTNVLYVTRVQKERFQSIEEYE 2118
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
++K S+ I + K + N I MH LP ++++ EV + + Y
Sbjct: 2119 KVK--DSFIITPHTLTK-ASDNMIVMHPLPRINEISPEVDSDPRAAY------------- 2162
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLG 326
F Q EN ++ ++A G
Sbjct: 2163 ------FRQMENGLYVRMSLLALVFG 2182
emb|CAA32782| (X14634) PYR1-3B multifunctional enzyme (1014 AA) [Dictyostelium
discoideum]
Length = 1014
Score = 74.5 bits (180), Expect = 1e-12
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 28/326 (8%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ F++ +L L A ++ L K L K +A +F + S
Sbjct: 711 GKHIFSVKQFNRKQLHALFGIAHEMRILVKRSGGSDLLKGKVLATLFYEPSTRTQCSFTA 770
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + + K ESI+DT + L S D + R VE + + +P+
Sbjct: 771 AMQRLGGSVVTVDNVSSSVAKGESIADTIQTLESYCDAVCMRHPAVGSVESAIQVAKKPI 830
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + LT+ VGD ++ +SL+ A V I
Sbjct: 831 INAGDGVGEHPTQALLDVFTIREELGTVNGLTITVVGDLKHGRTVHSLVRLLANYQVKIN 890
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQTAK 240
+SP SL EI K + ++ + +I + L +++Y T V + + +
Sbjct: 891 YVSPSSLSMPTEIIKELNEKGIEQKEYTNIESI---LPTTNVLYVTRVQKERFQSIEEYE 947
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFN 300
++K S+ I + K + N I MH LP ++++ EV + + Y
Sbjct: 948 KVK--DSFIITPHTLTK-ASDNMIVMHPLPRINEISPEVDSDPRAAY------------- 991
Query: 301 SKNSVVFEQAENRMHTIKEVMAATLG 326
F Q EN ++ ++A G
Sbjct: 992 ------FRQMENGLYVRMSLLALVFG 1011
sp|O66726|PYRB_AQUAE ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|2983068 (AE000688) aspartate
carbamoyltransferase catalytic chain [Aquifex aeolicus]
Length = 291
Score = 73.7 bits (178), Expect = 2e-12
Identities = 81/326 (24%), Positives = 144/326 (43%), Gaps = 52/326 (15%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
RS + +D +++E+ ++ +A K+ K+E I+ + L F + S
Sbjct: 2 RSLISSLDLTREEVEEILKYAKEFKEGKEETIK------ASAVLFFSEPSTRTRLSFEKA 55
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVL-GSMFDGIEFR------GFKQSDVEILAK 117
+LG + ++ K ES DT K G FD + FR +K EI+
Sbjct: 56 ARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYK----EIVKS 111
Query: 118 DSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNN-VANSLLVTGAIL 176
+ R V G HP+Q L DF TIKEHFG ++DL + YVGD +++ V S +
Sbjct: 112 LNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMF 171
Query: 177 GVNITIISPESLQPA-LEIQKLARKYAMKSRSKISIRTDLN-GLENADIVYTDVWVSMGE 234
G I + P++L P +E+ K+ + D++ G++ AD+V +W+ + +
Sbjct: 172 GAKIGVCGPKTLIPRDVEV------------FKVDVFDDVDKGIDWADVV---IWLRLQK 216
Query: 235 EAQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEV 294
E Q I SY + ++ K ++MH P + N +++
Sbjct: 217 ERQKENYIPSESSYFKQFGLTKERFEKVKLYMHPGP------------VNRN-----VDI 259
Query: 295 TDEVFNSKNSVVFEQAENRMHTIKEV 320
E+ ++ S++ EQ +N + K +
Sbjct: 260 DHELVYTEKSLIQEQVKNGIPVRKAI 285
sp|Q58976|PYRB_METJA ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|2127771|pir||D64497 aspartate
carbamoyltransferase (EC 2.1.3.2) catalytic chain -
Methanococcus jannaschii >gi|1500476 (U67598) aspartate
carbamoyltransferase catalytic chain (pyrB)
[Methanococcus jannaschii]
Length = 306
Score = 71.8 bits (173), Expect = 8e-12
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 17/275 (6%)
Query: 12 DFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAH 71
D K+E+L ++D A +++L K L K +A +F + S LG
Sbjct: 9 DIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGG- 67
Query: 72 PEFLGPNDIQ---LGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPVWN-GL 127
E + D++ + K ES+ DT +V+ D I R + + ++ S P+ N G
Sbjct: 68 -EVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGD 126
Query: 128 TDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAIL-GVNITIISP 185
HPTQ L D TI G + + +A+VGD + +SL+ ++ V + +SP
Sbjct: 127 GSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSP 186
Query: 186 ESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQTAKRIKL 244
+ L+ +I + + +K K S+ DL+ ++ D++Y T + + +++K
Sbjct: 187 KELRLPKDIIEDLKAKNIKFYEKESL-DDLD--DDIDVLYVTRIQKERFPDPNEYEKVK- 242
Query: 245 LKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
SY+I ++ VE K FI MH LP +++ +V
Sbjct: 243 -GSYKIKREYVE---GKKFIIMHPLPRVDEIDYDV 273
sp|Q55338|PYRB_SULSO ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|1486468|emb|CAA68165| (X99872) aspartate
carbamoyltransferase [Sulfolobus acidocaldarius]
Length = 299
Score = 71.4 bits (172), Expect = 1e-11
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 14/287 (4%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ + +FS+DEL + FA+ K K + K L K I++ F + S
Sbjct: 2 KHIISAYNFSRDELEDI--FALTDKYSKNLNDTRKILSGKTISIAFFEPSTRTYLSFQKA 59
Query: 65 XVDLGAHP-EFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
++LG F G + K E+++DT ++L + DGI R ++ S PV
Sbjct: 60 IINLGGDVIGFSGEESTSVAKGENLADTIRMLNNYSDGIVMRHKYDGASRFASEISDIPV 119
Query: 124 WN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLL-VTGAILGVNI 180
N G HPTQ + D TI +HF + L A +GD + NSLL + +
Sbjct: 120 INAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLV 179
Query: 181 TIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAK 240
+ISP+ L+ EI Y +K + + D++Y + +
Sbjct: 180 YLISPQLLRARKEILD-ELNYPVK-----EVENPFEVINEVDVLYV-TRIQKERFVDEME 232
Query: 241 RIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
K+ SY ++ + K + K+ I +H LP ++++ +V K K Y
Sbjct: 233 YEKIKGSYIVSLDLANK-MKKDSIILHPLPRVNEIDRKVDKTTKAKY 278
gb|AAC96537.1| (U42580) contains carbamyltransferase motif; similar to Arabidopsis
aspartate transcarbamylase, corresponds to Swiss-Prot
Accession Number P49077 [Paramecium bursaria Chlorella
virus 1]
Length = 323
Score = 69.9 bits (168), Expect = 3e-11
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 20/282 (7%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
+ +K FSK + L A K ++ + ++ K +L FE+ S
Sbjct: 24 KHIVKSQQFSKQTVQELCILASEFKNVRNDSLRGKKMLT-----YFEEPSTRTRLSFESA 78
Query: 65 XVDLGAHPEFL-GPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
DLG + + + K E+I DT + + D R E A+ SG PV
Sbjct: 79 MYDLGGYVMSVENAVNSSKAKGETIEDTVRTIERYADVFVIRSNTAGTAEKAARVSGIPV 138
Query: 124 WN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGD-GRNNVANSLLVTGAILGVNIT 181
N G HPTQ L D TI + FG L DLT+ VGD + +SL+ ++ V +
Sbjct: 139 INAGDGAGQHPTQALLDVYTIYDKFGDLNDLTIVVVGDLLYSRTVHSLVYMLSLFKVRMI 198
Query: 182 IISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKR 241
++P Q +++ + + + + N LE+ + V+++ ++ + R
Sbjct: 199 FVAPTECQMKYDLKNYLQDVGV-------VYEESNDLESVSKIADVVYMTRIQKERFTDR 251
Query: 242 ----IKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
K + Y +++ +VE+ + +N I MH LP +++ +V
Sbjct: 252 PDDYDKCVGKYIMSKMIVEQ-MKQNSIIMHPLPRVDEISPDV 292
ref|NP_012405.1|URA2| carbamoyl-phophate synthetase, aspartate transcarbamylase, and
glutamine amidotransferase; Ura2p
>gi|1172782|sp|P07259|PYR1_YEAST URA2 PROTEIN [INCLUDES:
GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATE SYNTHASE ;
ASPARTATE CARBAMOYLTRANSFERASE ] >gi|1070511|pir||QZBYU2
pyrimidine synthesis protein URA2 - yeast (Saccharomyces
cerevisiae) >gi|1008332|emb|CAA89425| (Z49405) ORF
YJL130c [Saccharomyces cerevisiae]
Length = 2214
Score = 69.5 bits (167), Expect = 4e-11
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 8/281 (2%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GR L F + + L A L+ + I IF + S
Sbjct: 1908 FRGRHILSIKQFKRSDFHVLFAVAQELRAAVAREGVLDLMKGHVITTIFFEPSTRTCSSF 1967
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + P + K E++ DT + L D I R ++ V I AK S
Sbjct: 1968 IAAMERLGGRIVNVNPLVSSVKKGETLQDTIRTLACYSDAIVMRHSEEMSVHIAAKYSPV 2027
Query: 122 PVWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVN 179
P+ NG HPTQ D TI+E G + +T+ ++GD ++ +SL V
Sbjct: 2028 PIINGGNGSREHPTQAFLDLFTIREEIGTVNGITVTFMGDLKHGRTVHSLCRLLMHYQVR 2087
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQT 238
I ++SP L+ +++ RK + I + + + D++Y T V +
Sbjct: 2088 INLVSPPELRLPEGLREELRKAGLLGVESIELTPHI--ISKTDVLYCTRVQEERFNSPEE 2145
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
R+K +Y ++ K++ +N MH LP +++ EV
Sbjct: 2146 YARLK--DTYIVDNKILAH-AKENMAIMHPLPRVNEIKEEV 2183
emb|CAA60825| (X87371) carbamyl phosphate synthetase [Saccharomyces cerevisiae]
Length = 2040
Score = 69.5 bits (167), Expect = 4e-11
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 8/281 (2%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GR L F + + L A L+ + I IF + S
Sbjct: 1734 FRGRHILSIKQFKRSDFHVLFAVAQELRAAVAREGVLDLMKGHVITTIFFEPSTRTCSSF 1793
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + P + K E++ DT + L D I R ++ V I AK S
Sbjct: 1794 IAAMERLGGRIVNVNPLVSSVKKGETLQDTIRTLACYSDAIVMRHSEEMSVHIAAKYSPV 1853
Query: 122 PVWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVN 179
P+ NG HPTQ D TI+E G + +T+ ++GD ++ +SL V
Sbjct: 1854 PIINGGNGSREHPTQAFLDLFTIREEIGTVNGITVTFMGDLKHGRTVHSLCRLLMHYQVR 1913
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQT 238
I ++SP L+ +++ RK + I + + + D++Y T V +
Sbjct: 1914 INLVSPPELRLPEGLREELRKAGLLGVESIELTPHI--ISKTDVLYCTRVQEERFNSPEE 1971
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
R+K +Y ++ K++ +N MH LP +++ EV
Sbjct: 1972 YARLK--DTYIVDNKILAH-AKENMAIMHPLPRVNEIKEEV 2009
gi|173146 (M27174) carbamyl phosphate synthetase [Saccharomyces cerevisiae]
Length = 2214
Score = 69.1 bits (166), Expect = 5e-11
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 8/281 (2%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GR L F + + L A L+ + I IF + S
Sbjct: 1908 FRGRHILSIKQFKRSDFHVLFAVAQELRARVAREGVLDLMKGHVITTIFFEPSTRTCSSF 1967
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + P + K E++ DT + L D I R ++ V I AK S
Sbjct: 1968 IAAMERLGGRIVNVNPLVSSVKKGETLQDTIRTLACYSDAIVMRHSEEMSVHIAAKYSPV 2027
Query: 122 PVWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVN 179
P+ NG HPTQ D TI+E G + +T+ ++GD ++ +SL V
Sbjct: 2028 PIINGGNGSREHPTQAFLDLFTIREEIGTVNGITVTFMGDLKHGRTVHSLCRLLMHYQVR 2087
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQT 238
I ++SP L+ +++ RK + I + + + D++Y T V +
Sbjct: 2088 INLVSPPELRLPEGLREELRKAGLLGVESIELTPHI--ISKTDVLYCTRVQEERFNSPEE 2145
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
R+K +Y ++ K++ +N MH LP +++ EV
Sbjct: 2146 YARLK--DTYIVDNKILAH-AKENMAIMHPLPRVNEIKEEV 2183
gi|2827897 (AF018428) aspartate carbamoyltransferase; ACTase [Helicobacter
pylori]
Length = 307
Score = 68.3 bits (164), Expect = 9e-11
Identities = 94/330 (28%), Positives = 138/330 (41%), Gaps = 65/330 (19%)
Query: 5 RSFLKEIDFSKDEL--------LYLIDF-AIHLKKLKKEHIQHKYLLDKNIALIFEKTSX 55
R L+ D S DE+ +Y DF A+ L+ +K H +K I +F + S
Sbjct: 6 RHLLQTSDLSLDEIKLLLEKASVYANDFNAVSLETKEKMH-------NKIIVALFFENST 58
Query: 56 XXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMF-DGIEFRGFKQSDVEI 114
+ LGA L K E+++DT K + +M D I R S
Sbjct: 59 RTVSSFEIASLRLGAKIVKLNMQTSSTSKGETLTDTFKNIHAMQPDAIITRHAFSSAPFK 118
Query: 115 LAKDSGRPVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDL---TLAYVGDGRNN-VANSL 169
LA+ S P+ N G HPTQ L D +T+ +HFG L++L +A++GD +N+ VANS
Sbjct: 119 LAEFSQCPLINAGSGTSAHPTQALLDLLTLYQHFGGLENLKGKKIAFIGDVKNSRVANSN 178
Query: 170 LVTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVW 229
+ LG+ I + +P S+ P +RT N +E A I + D+
Sbjct: 179 IKLLQRLGLEIMLCAPSSMLPI-----------------TPLRTTHN-IEEA-IAFADIL 219
Query: 230 VSM--GEEAQTAKRIKLLK----SYQINQKVVE-KIINKNFIFMHCLPSFHDLNTEVMKE 282
+S+ E A LK +Y I QK +E NK I +H P D++ E
Sbjct: 220 MSLRTQTERHNAPIFASLKDYGNAYCITQKRLETHAKNKEVIILHPGPVHRDIDIE---- 275
Query: 283 IKENYNLNELEVTDEVFNSKNSVVFEQAEN 312
V K S V EQ +N
Sbjct: 276 -------------SAVLEDKRSKVLEQVKN 292
sp|O25716|PYRB_HELPY ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|2314233|gb|AAD08128.1| (AE000615) aspartate
transcarbamoylase (pyrB) [Helicobacter pylori 26695]
Length = 307
Score = 68.3 bits (164), Expect = 9e-11
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 48/296 (16%)
Query: 5 RSFLKEIDFSKDEL--------LYLIDF-AIHLKKLKKEHIQHKYLLDKNIALIFEKTSX 55
R L+ D S DE+ +Y DF A+ L+ +K H +K I +F + S
Sbjct: 6 RHLLQTSDLSLDEIKLLLEKASVYANDFNAVSLETKEKMH-------NKIIVALFFENST 58
Query: 56 XXXXXXXXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMF-DGIEFRGFKQSDVEI 114
+ LGA L K E+++DT K + +M D I R S
Sbjct: 59 RTVSSFEIASLRLGAKIVKLNMQTSSASKGETLTDTFKNIHAMQPDAIITRHAFSSAPFK 118
Query: 115 LAKDSGRPVWNGLTDVW-HPTQMLADFMTIKEHFGHLQDL---TLAYVGDGRNN-VANSL 169
LA+ S P+ N + V HPTQ L D +T+ +HFG L++L +A++GD +N+ VANS
Sbjct: 119 LAEFSQCPLINAGSGVSAHPTQALLDLLTLYQHFGSLENLKGKKIAFIGDVKNSRVANSN 178
Query: 170 LVTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVW 229
+ LG+ I + +P S+ P+ +S++T N +E A I + D+
Sbjct: 179 IKLLQRLGLEIMLCAPSSMLPS-----------------VSLKTTHN-VEEA-IAFADIL 219
Query: 230 VSM--GEEAQTAKRIKLLKSYQ-----INQKVVEKIINKNFIFMHCLPSFHDLNTE 278
+S+ E LK Y Q++ NK I +H P D++ E
Sbjct: 220 MSLRTQTERHNTPIFASLKDYGNAYCITQQRLKAHAKNKEVIILHPGPVHRDIDIE 275
gi|191173 (M33702) dihydroorotase synthetase complex (EC 3.5.2.3) [Cricetulus
sp.]
Length = 708
Score = 66.0 bits (158), Expect = 4e-10
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 521 GQHILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 580
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 581 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 640
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVNIT 181
N V HPTQ L D TI+E G + +T+ VGD ++ +SL V++
Sbjct: 641 INAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLR 700
Query: 182 IISPESLQ 189
++P SL+
Sbjct: 701 YVAPPSLR 708
emb|CAB57686.1| (Y18930) aspartate carbamoyltransferase catalytic chain, (ATCASE)
[Sulfolobus solfataricus]
Length = 303
Score = 65.6 bits (157), Expect = 6e-10
Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 32/295 (10%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R + +D ++D+ + + A +KK + YL K ++L F + S
Sbjct: 4 RHVVSSLDLTRDDYFRIFELADKFYDVKKLN----YLSGKVVSLAFFEPSTRTAQSFHTA 59
Query: 65 XVDLGAHP-EFLGPNDIQLGKKESISDTAKVLGSM---------FDGIEFRGFKQSDVEI 114
+ LGA F + K E+++DT ++L + FDG + SD+ I
Sbjct: 60 AIKLGADVIGFASEESTSIAKGENLADTIRMLNNYSNCIVMRHKFDGAALFASEISDIPI 119
Query: 115 LAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLL-VT 172
+ G+ HPTQ + D T+ + FG + T A +GD + NSLL
Sbjct: 120 INAGDGKHE--------HPTQAVIDLYTVYKAFGEIDGRTFALLGDLKYARTVNSLLRAL 171
Query: 173 GAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSM 232
+ +ISP L+ EI +++ + + ++ D++Y +
Sbjct: 172 TRFKPKKVFLISPSQLKVRREILDELNYPVIETENPYDV------IQEIDVLYV-TRIQK 224
Query: 233 GEEAQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
+ K+ +SY ++ K+V ++ K+ I +H LP +++ V K + Y
Sbjct: 225 ERFVDEVEYEKVKESYVVDLKLV-NMMKKDGIILHPLPRVTEIDRRVDKTVNAKY 278
sp|Q9ZM81|PYRB_HELPJ ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|4154863 (AE001469) ASPARTATE
CARBAMOYLTRANSFERASE CATALYTIC CHAIN [Helicobacter
pylori J99]
Length = 307
Score = 65.6 bits (157), Expect = 6e-10
Identities = 87/323 (26%), Positives = 134/323 (40%), Gaps = 51/323 (15%)
Query: 5 RSFLKEIDFSKDELLYLIDFA-IHLKKLKKEHIQ-HKYLLDKNIALIFEKTSXXXXXXXX 62
R L+ D S DE+ L++ A ++ ++ + + DK I +F + S
Sbjct: 6 RHLLQTSDLSLDEIKLLLNKASVYANDFNAVSLETREKMQDKIIVALFFENSTRTVSSFE 65
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMF-DGIEFRGFKQSDVEILAKDSGR 121
+ LGA L K E++ DT K + +M D I R S LA+ S
Sbjct: 66 IASLRLGAKIVKLNMQTSSTSKGETLIDTFKNIHAMQPDAIITRHAFSSAPFKLAEFSQC 125
Query: 122 PVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDL---TLAYVGDGRNN-VANSLLVTGAIL 176
P+ N G HPTQ L D +T+ HFG L++L +A++GD +N+ VANS + L
Sbjct: 126 PLINAGSGTSAHPTQALLDLLTLYRHFGSLENLKGKKIAFIGDVKNSRVANSNIKLLQRL 185
Query: 177 GVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSM--GE 234
G+ I + +P S+ P ++ + +E A I + D+ +S+
Sbjct: 186 GLEIMLCAPSSMLPITPLK------------------TTHNIEEA-IGFADILMSLRTQT 226
Query: 235 EAQTAKRIKLLK----SYQINQKVVE-KIINKNFIFMHCLPSFHDLNTEVMKEIKENYNL 289
E A LK +Y I QK +E NK I +H P D++ E
Sbjct: 227 ERHNAPIFASLKDYGNAYCITQKRLETHAKNKEVIILHPGPVHRDIDIE----------- 275
Query: 290 NELEVTDEVFNSKNSVVFEQAEN 312
V K S V EQ +N
Sbjct: 276 ------SAVLEDKRSKVLEQVKN 292
sp|Q46803|YGEW_ECOLI HYPOTHETICAL 40.2 KD PROTEIN IN KDUI-LYSS INTERGENIC REGION
>gi|887820 (U28375) UUG start; possible frameshift at
end? [Escherichia coli] >gi|1789234 (AE000370) putative
carbamoyl transferase [Escherichia coli]
Length = 363
Score = 65.2 bits (156), Expect = 8e-10
Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 68/353 (19%)
Query: 16 DELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXXXVDLGAHPEFL 75
DEL ++D A LK L+ E+I K +F S LG + L
Sbjct: 9 DELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDL 68
Query: 76 GPNDIQLGKKESISDTAKVLGSMFDGIEFR---------------------GFKQSDVEI 114
Q+ E++ +TA ++ D I R G+KQ +
Sbjct: 69 DEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQG---V 125
Query: 115 LAKDSGRPVWNGLT-DVWHPTQMLADFMTIKEHFGHLQDL-------TLAYVGDGRN--N 164
L + RP L D+ HPTQ +AD ++EHFG L++L T AY +
Sbjct: 126 LPQ---RPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLS 182
Query: 165 VANSLLVTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADI 223
V ++ G+++T+ PE ++ ++A+ A S T + ++ADI
Sbjct: 183 VPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADI 242
Query: 224 VYTDVWV--SMGEE------AQTAKRIKLL-----------KSYQINQKVVEKIINKNFI 264
VY W + EE A + +K L K + ++++E + +
Sbjct: 243 VYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEAL 302
Query: 265 FMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENRMHTI 317
+MHCLP+ D++ + E EVT+ VF +++A + + I
Sbjct: 303 YMHCLPA--DIS---------GVSCKEGEVTEGVFEKYRIATYKEASWKPYII 344
emb|CAB73353.1| (AL139077) aspartate carbamoyltransferase [Campylobacter jejuni]
Length = 295
Score = 64.0 bits (153), Expect = 2e-09
Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 56/336 (16%)
Query: 5 RSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXXX 64
R + DF+K E++ L A K +L K+I IF + S
Sbjct: 2 RHLITTKDFNKVEIMELFKEASDFLDEKPR----TFLEGKSITTIFFENSTRTLSSFESA 57
Query: 65 XVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMF-DGIEFRGFKQSDVEILAKDSGRPV 123
LGA L + K E++ DTA L +M + I R ILAK PV
Sbjct: 58 ARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHANSGVPLILAKHMHCPV 117
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHF-GHLQDLTLAYVGDGRNN-VANSLLVTGAILGVNI 180
NG HPTQ L D TI HF G+++ + VGD +N+ VA S + + ++I
Sbjct: 118 VNGGDGKHAHPTQALLDLFTIYNHFQGNVEGKKICIVGDIKNSRVAASNIELLSRFNLDI 177
Query: 181 TIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAK 240
T+++P P ++K + D N + N+DI+ M QT +
Sbjct: 178 TLVAPPHFMPNTHLKK-------------HYKLDENIIANSDII-------MSLRTQTER 217
Query: 241 RIKL----LKSYQINQKVVEK--IINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEV 294
K LK Y N ++K + +K I +H P + N +++
Sbjct: 218 HNKTVYASLKDY-ANDFCIQKSLVKDKKLILLHPGP------------VNRN-----IDI 259
Query: 295 TDEVFNSKNSVVFEQAEN----RMHTIKEVMAATLG 326
+DE+ +++ ++V +Q +N RM +K+++ G
Sbjct: 260 SDEMMSNERTLVLKQVKNGVAIRMAVLKKLILENEG 295
gi|4185560 (AF112473) PyrABCN [Emericella nidulans]
Length = 2275
Score = 64.0 bits (153), Expect = 2e-09
Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 14/286 (4%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+ + L F++ +L L A ++ + L + + +F + S
Sbjct: 1952 FKQKHVLSVNQFNRADLHLLFTVAQEMRLGVQREGVLDILKGRLLCTLFYEPSTRTSASF 2011
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + K E++ DT + LG D + R + S E+ AK S
Sbjct: 2012 DVAMQRLGGRTIAISTEHSSTKKGETLQDTLRTLGCYGDAVVLRHPEPSSTEVAAKFSPV 2071
Query: 122 PVWNGLT-DVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAILGVN 179
PV NG V HPTQ D TI+E G + LT+ + GD + +SL+ V
Sbjct: 2072 PVINGGNGSVEHPTQAFLDLFTIREELGTVGGLTITFTGDLKYGRPVHSLIKLLQFYDVR 2131
Query: 180 ITIISPESLQPALEI--QKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQ 237
+ +++P+ L +I Q LA + +++ + +D++Y+ E
Sbjct: 2132 VQLVAPKDLSLPADIRQQLLATGQLLTESEELTPEI----VARSDVLYST--RVQKERFA 2185
Query: 238 TAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEI 283
++ + LK+ I + K + + MH LP N EV +E+
Sbjct: 2186 DLEQYERLKNSFIIDNALLKHAKSHMVVMHPLPR----NAEVSEEV 2227
dbj|BAA80664.1| (AP000062) 312aa long hypothetical aspartate carbamoyltransferase
catalytic chain [Aeropyrum pernix]
Length = 312
Score = 62.1 bits (148), Expect = 7e-09
Identities = 70/283 (24%), Positives = 118/283 (40%), Gaps = 14/283 (4%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GR + DF++ +L L A + + K L K +AL F + S
Sbjct: 10 FKGRDVISITDFTRGDLELLFRQA----DVIESKAGSKPLDGKVVALAFFEPSTRTRLSF 65
Query: 62 XXXXVDLGAHPEFL-GPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSG 120
LG + G I + K E+++DT +L S D I R + A+ +
Sbjct: 66 ETAVKRLGGSTLLISGEEAISVAKGENLADTITMLDSYADAIVIRHRYEGAALYAAEVAE 125
Query: 121 RPVWNGLTD-VWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRNNVANSLLVTGAIL--G 177
+PV NG HPTQ + D T+ FG + LT +GD R A S + G L
Sbjct: 126 KPVINGGDGRQHHPTQAMLDLYTVYSLFGTVDGLTYGVLGDLRYGRAASSFILGLSLFNP 185
Query: 178 VNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQ 237
++ +ISP L+ E+ + K + ++ L L D++Y V E
Sbjct: 186 RHVYLISPPQLRARREVLEALEKRGVPYTEVERLQDVLGEL---DVLY--VTRIQKERIP 240
Query: 238 TAKRIKLLK-SYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
+ + L+ SY++ ++E ++ +H LP +++ V
Sbjct: 241 DPREYESLRGSYRVTLDLLESFAKESLKVLHPLPRVDEIDFSV 283
gi|173144 (J04711) carbamylase phosphate synthetase-aspartate
transcarbamylase (EC 2.1.3.2) [Saccharomyces cerevisiae]
Length = 947
Score = 61.7 bits (147), Expect = 9e-09
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 7/281 (2%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
F+GR L F + + L A L+ + I IF + S
Sbjct: 640 FRGRHILSIKQFKRSDFHVLFAVAQELRARVAREGVLDLMKGHVITTIFFEPSTRTCSSF 699
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
LG + P + K E++ D + L D I R ++ V I AK S
Sbjct: 700 IAAMERLGGRIVNVNPLVSSVKKGETLQDIIRTLACYSDAIVMRHSEEMSVHIAAKYSPV 759
Query: 122 PVWNGLTDVWH-PTQMLADFMTIKEHFGHLQDLTLAYVGDGRN-NVANSLLVTGAILGVN 179
P+ NG PTQ D TI+E G + +T+ ++GD ++ +SL V
Sbjct: 760 PIINGGNGSRELPTQAFLDLFTIREEIGTVNGITVTFMGDLKHGRTVHSLCRLLMHYQVR 819
Query: 180 ITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVY-TDVWVSMGEEAQT 238
I ++SP L+ +++ RK + I + + + D++Y T V +
Sbjct: 820 INLVSPPELRLPEGLREELRKAGLLGVESIELTPHI--ISKTDVLYCTRVQEERFNSPEE 877
Query: 239 AKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLNTEV 279
R+K +Y ++ KN MH LP +++ EV
Sbjct: 878 YARLK--DTYIVDNVRSWHTQQKNMAIMHPLPRVNEIKEEV 916
dbj|BAA22792| (AB007852) aspartate carbamoyltransferase [Trypanosoma cruzi]
Length = 326
Score = 58.6 bits (139), Expect = 7e-08
Identities = 68/300 (22%), Positives = 124/300 (40%), Gaps = 19/300 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+G+S FS+ ++ LI A +++ L + + +F + S
Sbjct: 11 KGKSITSAEQFSRADIYALIHLASAMQRKIDAGEVLNLLQGRIMTPLFFEDSSRTFSSFC 70
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ LG + K E+++DT + L S D + R +Q +E + P
Sbjct: 71 AAMIRLGGSVVNFKVEASSINKGETLADTIRTLDSYSDVLVMRHPRQDAIEEALSVAQHP 130
Query: 123 VWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAILGVNI 180
+ N HPTQ L D +TI G + +T+A +GD + +SLL +L N
Sbjct: 131 ILNAGNGAGEHPTQALLDTLTIHSELGSVDGITIALIGDLKMGRTVHSLL---KLLVRNF 187
Query: 181 TI-----ISPESLQ-PALEIQKLARKYAMKS--RSKISIRTDLNGLENADIVYTDVWVSM 232
+I ++P++LQ P ++ L + A K + TD ++ +D++YT
Sbjct: 188 SIKCVFLVAPDALQMPQDVLEPLQHEIATKGVIIHRTHALTD-EVMQKSDVLYTTRLQKE 246
Query: 233 GEEAQTAKRIKLLKSYQINQKVV-----EKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
A T+ L+S+ + ++ + I MH LP +L+T V + + Y
Sbjct: 247 RFMASTSDDAAALQSFAAKADITIDAARMRLAKEKMIVMHPLPRNDELSTTVDADPRAAY 306
dbj|BAA74525.1| (AB017765) ACTase [Trypanosoma cruzi]
Length = 326
Score = 58.2 bits (138), Expect = 1e-07
Identities = 68/300 (22%), Positives = 124/300 (40%), Gaps = 19/300 (6%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXX 62
+G+S FS+ ++ LI A +++ L + + +F + S
Sbjct: 11 KGKSITSAEQFSRADIYALIHLASAMQRKIDAGEVLNLLQGRIMTPLFFEDSSRTFSSFC 70
Query: 63 XXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRP 122
+ LG + K E+++DT + L S D + R +Q +E + P
Sbjct: 71 AAMIRLGGSVVNFKVEASSINKGETLADTIRTLDSYSDVLVMRHPRQDAIEEALSVAQHP 130
Query: 123 VWNGLTDVW-HPTQMLADFMTIKEHFGHLQDLTLAYVGDGR-NNVANSLLVTGAILGVNI 180
+ N HPTQ L D +TI G + +T+A +GD + +SLL +L N
Sbjct: 131 ILNAGNGAGEHPTQALLDTLTIHSELGSVDGITIALIGDLKMGRTVHSLL---KLLVRNF 187
Query: 181 TI-----ISPESLQ-PALEIQKLARKYAMKS--RSKISIRTDLNGLENADIVYTDVWVSM 232
+I ++P++LQ P ++ L + A K + TD ++ +D++YT
Sbjct: 188 SIKCVFLVAPDALQMPQDVLEPLQHEIATKGVIIHRTHALTD-EVMQKSDVLYTTRLQKE 246
Query: 233 GEEAQTAKRIKLLKSYQINQKVV-----EKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
A T+ L+S+ + ++ + I MH LP +L+T V + + Y
Sbjct: 247 RFMASTSDDAAALQSFAAKTDITIDAARIRLAKEKMIVMHPLPRNDELSTTVDADPRAAY 306
pir||C33917 pyrimidine synthesis protein CAD - Chinese hamster (fragment)
Length = 156
Score = 54.7 bits (129), Expect = 1e-06
Identities = 40/146 (27%), Positives = 63/146 (42%), Gaps = 1/146 (0%)
Query: 4 GRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXXXX 63
G+ L F+KD++ +L + A L+ + ++ L K +A +F + S
Sbjct: 6 GQHILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAA 65
Query: 64 XXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGRPV 123
LG + K ES++D+ + + D + R + VE+ AK RPV
Sbjct: 66 AMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPV 125
Query: 124 WNGLTDVW-HPTQMLADFMTIKEHFG 148
N V HPTQ L D TI+E G
Sbjct: 126 INAGDGVGEHPTQALLDIFTIREELG 151
gb|AAF10682.1|AE001961_1 (AE001961) aspartate carbamoyltransferase [Deinococcus radiodurans]
Length = 314
Score = 53.1 bits (125), Expect = 3e-06
Identities = 60/241 (24%), Positives = 99/241 (40%), Gaps = 43/241 (17%)
Query: 82 LGKKESISDTAKVLGSM-FDGIEFRGFKQSDVEILAKDSGRPVWN-GLTDVWHPTQMLAD 139
+ K ES+ DT +VL + D R ++AK SG+PV N G HPTQ L D
Sbjct: 90 VSKGESLRDTIEVLTAYKVDAYVVRHHAAGAAHLVAKYSGKPVINAGDGRRAHPTQALLD 149
Query: 140 FMTIKEHFGHLQDLTLAYVGDGRNN-VANSLLVTGAILGVNITIISPESL-------QPA 191
TI++ +G L+ +A +GD R++ VA S LG + + P +L QP
Sbjct: 150 AYTIRQEYGSLEGKKVAIIGDIRHSRVARSNAELLPKLGAEVVLCGPATLLPPDLAGQPG 209
Query: 192 LEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGEEAQTAKRIKLLKSYQIN 251
+ + R+ + + +++R + + S+ E A T YQ+N
Sbjct: 210 VRLTTDPREAVRGAHAVMALRLQQERMNGGYL------ASLQEYADT---------YQVN 254
Query: 252 QKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAE 311
+ ++ + I +H P D LE++ E + S + Q E
Sbjct: 255 ETLMRE-AESGAIVLHPGPMNRD-----------------LEISTEAADGPRSRIIRQVE 296
Query: 312 N 312
N
Sbjct: 297 N 297
sp|Q43087|PYB2_PEA ASPARTATE CARBAMOYLTRANSFERASE 2 PRECURSOR (ASPARTATE
TRANSCARBAMYLASE 2) (ATCASE 2) >gi|495661 (L15798)
aspartate transcarbamoylase [Pisum sativum]
Length = 385
Score = 50.4 bits (118), Expect = 2e-05
Identities = 61/297 (20%), Positives = 120/297 (39%), Gaps = 21/297 (7%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
FQ ++ F +D L + + A ++K+++ + + L +A +F + S
Sbjct: 77 FQLDDVVEAQQFDRDILNAIFEVARDMEKIERNSPESQILKGYLMATLFYEPSTRTRLSF 136
Query: 62 XXXXVDLGAHPEFLGPNDIQ----LGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
LG E L + + K E++ DT + + D I R F+ A
Sbjct: 137 ESAMRRLGG--EVLTTENAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAT 194
Query: 118 DSGRPVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN--NVANSLLVTGA 174
+G P+ N G HP+Q L D TI+ G L + + VGD N V + +
Sbjct: 195 IAGIPIVNAGDGPGQHPSQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLTYLLAK 254
Query: 175 ILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGE 234
V I +SPE ++ +I+ + + + D+VY + +
Sbjct: 255 YKDVKIYFVSPEVVKMKDDIKDYLTSKGVDWEESSDL---VEVASECDVVYQ----TRIQ 307
Query: 235 EAQTAKRIKLLK----SYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
+ + +R+ L + + +NQ ++ + ++ + MH LP ++ +V + + Y
Sbjct: 308 KERFGERLDLYEKARGKFIVNQNIL-NAMQRHAVIMHPLPRLDEITVDVDADPRAAY 363
sp|Q43064|PYB3_PEA ASPARTATE CARBAMOYLTRANSFERASE 3 PRECURSOR (ASPARTATE
TRANSCARBAMYLASE 3) (ATCASE 3) >gi|609344 (U05293)
aspartate carbamoyltransferase [Pisum sativum]
Length = 391
Score = 49.2 bits (115), Expect = 5e-05
Identities = 60/297 (20%), Positives = 119/297 (39%), Gaps = 21/297 (7%)
Query: 2 FQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDKNIALIFEKTSXXXXXXX 61
FQ ++ F +D L + + A ++ +++ + + L +A +F + S
Sbjct: 83 FQLDDVIEAQQFDRDILNAIFEIARDMENIERNSPESQILKGYLMATLFYEPSTRTRLSF 142
Query: 62 XXXXVDLGAHPEFLGPNDIQ----LGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAK 117
LG E L + + K E++ DT + + D I R F+ A
Sbjct: 143 ESAMRRLGG--EVLTTENAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAA 200
Query: 118 DSGRPVWN-GLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGDGRN--NVANSLLVTGA 174
+G P+ N G HP+Q L D TI+ G L + + VGD N V + +
Sbjct: 201 IAGIPIVNAGDGPGQHPSQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 260
Query: 175 ILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGLENADIVYTDVWVSMGE 234
V I +SPE ++ +I+ + + + D+VY + +
Sbjct: 261 YKDVKIYFVSPEVVKMKDDIKDYLTSKGVDWEESSDL---VEVASECDVVYQ----TRIQ 313
Query: 235 EAQTAKRIKLLK----SYQINQKVVEKIINKNFIFMHCLPSFHDLNTEVMKEIKENY 287
+ + +R+ L + + +NQ ++ + ++ + MH LP ++ +V + + Y
Sbjct: 314 KERFGERLDLYEKARGKFIVNQNIL-NAMQRHAVIMHPLPRLDEITVDVDADPRAAY 369
sp|Q59711|PYRB_PSEPU ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|1360919|pir||A56144 aspartate
carbamoyltransferase (EC 2.1.3.2) 36k catalytic chain -
Pseudomonas putida (strain PpN-1)
>gi|151521|gb|AAD15279| (M97253) aspartate
carbamoyltransferase [Pseudomonas putida]
Length = 334
Score = 44.5 bits (103), Expect = 0.001
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLL-DKNIALIFEKTSXXXXXXX 61
Q R FL ++ L ++D A ++ ++ LL K + +F + S
Sbjct: 17 QLRHFLSLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTF 76
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQS----------- 110
L A L + K E++ DT + L +M + S
Sbjct: 77 ELAAQRLSADVISLNVSTSSTSKGETLFDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVC 136
Query: 111 -DVEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGD-GRNNVANS 168
DV ++ GR HPTQ + D +TI+ H G ++L++A VGD + VA S
Sbjct: 137 PDVAVINGGDGRHA--------HPTQGMLDMLTIRRHKGSFENLSVAIVGDILHSRVARS 188
Query: 169 LLVTGAILGV-NITIISPESLQPALEIQKLARKYAMKSRSKISIRTDL-NGLENADIV 224
++ LG +I +I P++L P + I++ + + TDL GL++ D+V
Sbjct: 189 DMLALKALGCPDIRVIGPKTLIP-IGIEQYG----------VKVYTDLAEGLKDVDVV 235
sp|Q59653|PYRB_PSEAE ASPARTATE CARBAMOYLTRANSFERASE (ASPARTATE TRANSCARBAMYLASE)
(ATCASE) >gi|309885 (L19649) 'aspartate
transcarbamoylase' [Pseudomonas aeruginosa]
Length = 334
Score = 42.6 bits (98), Expect = 0.005
Identities = 47/195 (24%), Positives = 82/195 (41%), Gaps = 7/195 (3%)
Query: 3 QGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLL-DKNIALIFEKTSXXXXXXX 61
Q R F+ ++ L ++D A ++ ++ LL K + +F + S
Sbjct: 16 QLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTF 75
Query: 62 XXXXVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGIEFRGFKQSDVEILAKDSGR 121
L A L + K E+++DT + L +M + S +
Sbjct: 76 ELAAQRLSADVISLNVSTSSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVS 135
Query: 122 P----VWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGD-GRNNVANSLLVTGAIL 176
P + G HPTQ + D +TI+ H G+ + L++A VGD + VA S ++ L
Sbjct: 136 PNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTL 195
Query: 177 GV-NITIISPESLQP 190
G +I +I+P +L P
Sbjct: 196 GCPDIRVIAPATLLP 210
Posted date: Mar 2, 2000 12:24 PM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.319 0.137 0.385
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82748979
Number of Sequences: 457798
Number of extensions: 3266654
Number of successful extensions: 10159
Number of sequences better than 1.0e-02: 184
Number of HSP's better than 0.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 9611
Number of HSP's gapped (non-prelim): 189
length of query: 333
length of database: 140,871,481
effective HSP length: 57
effective length of query: 276
effective length of database: 114,776,995
effective search space: 31678450620
effective search space used: 31678450620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 96 (41.8 bits)